Query 037916
Match_columns 741
No_of_seqs 719 out of 4741
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 09:14:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037916hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 9.9E-53 3.4E-57 433.8 13.7 262 401-711 37-303 (307)
2 4aoj_A High affinity nerve gro 100.0 4.3E-52 1.5E-56 435.3 15.8 267 402-709 43-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 9.5E-53 3.3E-57 434.2 10.1 269 401-710 14-291 (299)
4 4fih_A Serine/threonine-protei 100.0 4.5E-52 1.6E-56 434.1 15.3 249 401-701 75-323 (346)
5 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-51 3.9E-56 429.9 14.9 257 402-712 60-320 (336)
6 4gt4_A Tyrosine-protein kinase 100.0 1.4E-51 4.7E-56 427.4 13.0 265 401-706 27-304 (308)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-51 3.4E-56 425.0 10.4 250 400-701 32-284 (311)
8 3hyh_A Carbon catabolite-derep 100.0 4.1E-51 1.4E-55 414.9 14.0 247 400-701 13-262 (275)
9 4b9d_A Serine/threonine-protei 100.0 1.2E-51 4.1E-56 431.6 10.3 250 401-701 25-276 (350)
10 4fie_A Serine/threonine-protei 100.0 6.9E-51 2.4E-55 435.6 15.7 249 401-701 152-400 (423)
11 3fpq_A Serine/threonine-protei 100.0 9.2E-51 3.1E-55 416.1 15.9 249 403-701 29-282 (290)
12 4ase_A Vascular endothelial gr 100.0 4.5E-50 1.6E-54 423.3 11.9 272 400-710 64-349 (353)
13 3hmm_A TGF-beta receptor type- 100.0 1.7E-49 5.7E-54 413.0 15.6 281 401-709 4-298 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.5E-50 2.6E-54 411.3 8.3 243 400-696 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 6.9E-49 2.4E-53 406.1 15.2 258 399-701 4-279 (299)
16 3rgz_A Protein brassinosteroid 100.0 1.7E-47 5.8E-52 450.8 27.6 357 2-361 300-744 (768)
17 4b99_A Mitogen-activated prote 100.0 4.3E-48 1.5E-52 415.5 12.5 274 401-701 55-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 1.1E-46 3.7E-51 400.5 14.5 197 400-619 21-248 (361)
19 3rgz_A Protein brassinosteroid 100.0 4.9E-45 1.7E-49 429.8 27.7 359 2-363 275-722 (768)
20 3v5w_A G-protein coupled recep 100.0 3.2E-45 1.1E-49 408.7 15.0 249 401-701 190-449 (689)
21 2id5_A Lingo-1, leucine rich r 100.0 3.2E-43 1.1E-47 392.5 25.4 346 2-363 17-362 (477)
22 3uto_A Twitchin; kinase, muscl 100.0 1.9E-44 6.5E-49 406.4 15.0 252 400-701 157-410 (573)
23 3v47_A TOLL-like receptor 5B a 100.0 1.3E-42 4.4E-47 385.3 22.2 342 3-361 17-412 (455)
24 3vq2_A TLR4, TOLL-like recepto 100.0 2.7E-42 9.1E-47 397.1 25.1 346 2-361 38-562 (606)
25 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-43 6.4E-48 371.2 13.1 270 400-717 10-291 (310)
26 2qkw_B Protein kinase; three-h 100.0 3.9E-42 1.3E-46 363.0 20.2 277 400-710 39-317 (321)
27 3v47_A TOLL-like receptor 5B a 100.0 7.7E-42 2.6E-46 379.1 22.5 326 2-340 36-414 (455)
28 3fxz_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47 361.5 14.5 250 400-701 20-269 (297)
29 3tki_A Serine/threonine-protei 100.0 2E-42 6.9E-47 364.9 14.7 257 398-702 5-262 (323)
30 3fe3_A MAP/microtubule affinit 100.0 1.7E-42 5.7E-47 365.7 13.4 250 399-702 14-265 (328)
31 4eco_A Uncharacterized protein 100.0 9.4E-42 3.2E-46 392.8 20.5 301 37-355 239-577 (636)
32 2z7x_B TOLL-like receptor 1, v 100.0 3.9E-41 1.3E-45 379.9 24.3 334 2-360 6-484 (520)
33 4eco_A Uncharacterized protein 100.0 5E-41 1.7E-45 386.7 25.1 345 2-361 212-604 (636)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.8E-41 2E-45 381.9 25.4 334 2-360 37-513 (562)
35 3zgw_A Maternal embryonic leuc 100.0 3.5E-42 1.2E-46 365.3 14.3 252 399-702 9-261 (347)
36 3p86_A Serine/threonine-protei 100.0 2.7E-42 9.3E-47 361.5 12.5 265 398-713 35-303 (309)
37 3soc_A Activin receptor type-2 100.0 1E-41 3.5E-46 359.7 16.1 284 401-710 25-320 (322)
38 2psq_A Fibroblast growth facto 100.0 1E-41 3.5E-46 366.4 16.3 271 400-711 81-367 (370)
39 1ziw_A TOLL-like receptor 3; i 100.0 2E-40 6.9E-45 386.6 27.9 357 2-361 228-626 (680)
40 3ugc_A Tyrosine-protein kinase 100.0 1.8E-42 6E-47 361.0 8.9 278 400-711 10-294 (295)
41 2yab_A Death-associated protei 100.0 3.8E-41 1.3E-45 359.6 18.1 251 400-701 12-272 (361)
42 3uim_A Brassinosteroid insensi 100.0 2.2E-41 7.6E-46 358.0 15.9 278 397-706 27-309 (326)
43 3t6q_A CD180 antigen; protein- 100.0 3E-40 1E-44 380.0 26.3 340 2-355 39-436 (606)
44 2z63_A TOLL-like receptor 4, v 100.0 1.6E-40 5.4E-45 379.5 23.6 346 2-361 34-535 (570)
45 4eqm_A Protein kinase; transfe 100.0 1.3E-41 4.4E-46 354.1 13.1 268 396-711 7-278 (294)
46 3j0a_A TOLL-like receptor 5; m 100.0 6.5E-41 2.2E-45 398.8 20.6 88 270-361 477-564 (844)
47 3lb7_A RAF proto-oncogene seri 100.0 1.7E-41 5.8E-46 355.3 13.8 264 400-711 36-303 (307)
48 3t6q_A CD180 antigen; protein- 100.0 3E-40 1E-44 379.9 25.4 356 2-360 135-563 (606)
49 3cbl_A C-FES, proto-oncogene t 100.0 5.8E-42 2E-46 369.6 10.3 259 401-709 115-375 (377)
50 3kul_A Ephrin type-A receptor 100.0 1E-41 3.6E-46 359.9 12.0 263 399-711 48-316 (325)
51 2y0a_A Death-associated protei 100.0 8.9E-41 3E-45 353.0 19.1 253 398-701 9-271 (326)
52 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-41 6.5E-46 358.2 13.8 248 400-702 9-259 (336)
53 3q4u_A Activin receptor type-1 100.0 3.6E-41 1.2E-45 352.2 15.5 268 398-706 6-300 (301)
54 1o6l_A RAC-beta serine/threoni 100.0 4.1E-41 1.4E-45 356.0 16.1 249 400-702 5-261 (337)
55 2izr_A Casein kinase I isoform 100.0 4.5E-41 1.5E-45 356.2 16.4 265 400-711 9-284 (330)
56 2yex_A Serine/threonine-protei 100.0 1E-40 3.5E-45 344.1 18.6 258 396-701 3-261 (276)
57 3l9p_A Anaplastic lymphoma kin 100.0 4.9E-42 1.7E-46 368.6 8.8 268 400-711 71-348 (367)
58 2pmi_A Negative RE, cyclin-dep 100.0 4.7E-41 1.6E-45 353.8 16.1 287 399-701 4-293 (317)
59 2nru_A Interleukin-1 receptor- 100.0 2.5E-40 8.5E-45 346.9 21.1 267 403-708 34-306 (307)
60 1tki_A Titin; serine kinase, m 100.0 4.4E-41 1.5E-45 354.2 15.2 252 400-702 5-258 (321)
61 3vhe_A Vascular endothelial gr 100.0 2.7E-41 9.3E-46 362.5 13.3 272 400-710 22-357 (359)
62 3soa_A Calcium/calmodulin-depe 100.0 9.9E-41 3.4E-45 365.7 17.3 256 397-702 8-268 (444)
63 2c30_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 351.1 17.3 249 401-701 46-294 (321)
64 3o0g_A Cell division protein k 100.0 3.1E-41 1.1E-45 351.1 12.4 278 401-701 3-282 (292)
65 4fr4_A YANK1, serine/threonine 100.0 8.6E-41 3E-45 358.8 16.1 252 399-701 14-271 (384)
66 2bdw_A Hypothetical protein K1 100.0 9.1E-41 3.1E-45 357.7 16.0 255 397-702 26-285 (362)
67 4dc2_A Protein kinase C IOTA t 100.0 1.2E-40 4E-45 358.9 16.9 253 399-696 51-307 (396)
68 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-40 4.1E-45 347.7 16.5 253 399-701 12-292 (298)
69 4ecn_A Leucine-rich repeat pro 100.0 5.9E-40 2E-44 384.0 23.9 307 37-363 481-823 (876)
70 1csn_A Casein kinase-1; phosph 100.0 1.6E-40 5.6E-45 346.6 17.2 269 399-713 9-288 (298)
71 4hcu_A Tyrosine-protein kinase 100.0 8.9E-41 3.1E-45 343.2 15.0 257 400-709 10-267 (269)
72 3c0i_A Peripheral plasma membr 100.0 7.1E-41 2.4E-45 357.4 14.7 258 397-701 21-286 (351)
73 3op5_A Serine/threonine-protei 100.0 8.9E-41 3E-45 358.9 15.5 275 401-712 36-333 (364)
74 3qd2_B Eukaryotic translation 100.0 2E-40 6.9E-45 351.5 17.5 259 398-701 4-325 (332)
75 3rp9_A Mitogen-activated prote 100.0 3E-41 1E-45 374.1 11.5 204 400-617 53-283 (458)
76 3vq2_A TLR4, TOLL-like recepto 100.0 8.8E-40 3E-44 376.1 24.0 157 2-173 17-174 (606)
77 3kex_A Receptor tyrosine-prote 100.0 7.1E-41 2.4E-45 353.8 13.6 259 401-710 14-278 (325)
78 4euu_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 347.4 18.7 281 401-707 10-308 (319)
79 3poz_A Epidermal growth factor 100.0 3.6E-41 1.2E-45 356.3 10.8 259 400-709 15-279 (327)
80 3niz_A Rhodanese family protei 100.0 2.7E-40 9.2E-45 347.0 17.0 272 397-701 18-300 (311)
81 2qol_A Ephrin receptor; recept 100.0 4.9E-41 1.7E-45 361.2 11.2 262 400-711 45-312 (373)
82 3g33_A Cell division protein k 100.0 1.1E-40 3.7E-45 349.7 13.5 286 394-701 3-296 (308)
83 3tt0_A Basic fibroblast growth 100.0 1.3E-40 4.5E-45 359.8 14.4 274 400-714 69-358 (382)
84 2ivs_A Proto-oncogene tyrosine 100.0 1E-40 3.6E-45 350.9 13.1 268 400-708 23-311 (314)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.9E-41 1.4E-45 358.5 9.9 249 399-701 22-280 (353)
86 3oz6_A Mitogen-activated prote 100.0 9.7E-41 3.3E-45 361.9 13.1 207 396-620 5-233 (388)
87 3n9x_A Phosphotransferase; mal 100.0 7.4E-41 2.5E-45 367.4 12.3 206 400-619 26-253 (432)
88 3lxl_A Tyrosine-protein kinase 100.0 3.2E-41 1.1E-45 357.0 8.9 281 400-713 23-308 (327)
89 2id5_A Lingo-1, leucine rich r 100.0 2.2E-39 7.6E-44 361.4 24.3 323 23-360 13-336 (477)
90 3qup_A Tyrosine-protein kinase 100.0 6E-41 2.1E-45 354.2 10.8 273 399-711 22-301 (323)
91 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-40 4.3E-45 341.9 12.7 256 400-708 8-264 (268)
92 4hgt_A Casein kinase I isoform 100.0 4.4E-40 1.5E-44 343.0 17.0 273 396-713 5-285 (296)
93 1kob_A Twitchin; kinase, intra 100.0 2E-40 6.8E-45 357.2 14.8 252 400-701 51-304 (387)
94 3dls_A PAS domain-containing s 100.0 2.5E-40 8.6E-45 350.6 15.2 246 397-702 21-275 (335)
95 4f0f_A Serine/threonine-protei 100.0 2.9E-40 1E-44 342.8 15.2 254 400-706 19-287 (287)
96 3uc3_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 356.4 13.0 254 400-702 20-275 (361)
97 1luf_A Muscle-specific tyrosin 100.0 6E-41 2.1E-45 357.4 10.1 272 399-711 46-338 (343)
98 4agu_A Cyclin-dependent kinase 100.0 7.1E-41 2.4E-45 351.7 10.5 277 400-702 3-285 (311)
99 2eva_A TAK1 kinase - TAB1 chim 100.0 2.9E-40 1E-44 346.1 15.1 260 400-713 8-268 (307)
100 3gen_A Tyrosine-protein kinase 100.0 4.4E-40 1.5E-44 340.7 16.1 257 400-709 24-281 (283)
101 3ork_A Serine/threonine protei 100.0 5.7E-41 2E-45 352.3 9.6 267 400-710 12-283 (311)
102 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-40 7.9E-45 353.0 14.4 250 400-701 53-305 (349)
103 2a2a_A Death-associated protei 100.0 1E-39 3.5E-44 344.4 19.1 253 398-701 10-272 (321)
104 3a8x_A Protein kinase C IOTA t 100.0 3.7E-40 1.3E-44 350.3 15.7 251 400-696 9-264 (345)
105 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-39 4.2E-44 370.3 20.9 155 3-172 12-168 (549)
106 3og7_A AKAP9-BRAF fusion prote 100.0 9.1E-41 3.1E-45 346.9 10.5 263 397-708 21-288 (289)
107 1xjd_A Protein kinase C, theta 100.0 1.2E-40 4.2E-45 353.3 11.7 248 399-700 16-268 (345)
108 1fot_A TPK1 delta, CAMP-depend 100.0 3.7E-40 1.3E-44 346.2 15.1 245 400-701 6-258 (318)
109 4fvq_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45 349.7 7.6 255 400-710 8-277 (289)
110 3f3z_A Calcium/calmodulin-depe 100.0 7.3E-40 2.5E-44 337.9 17.1 252 398-701 7-261 (277)
111 2y94_A 5'-AMP-activated protei 100.0 4.6E-40 1.6E-44 362.7 16.2 248 400-701 16-266 (476)
112 1ob3_A PFPK5, cell division co 100.0 1.2E-40 4.2E-45 345.8 10.7 272 401-701 3-280 (288)
113 3ttj_A Mitogen-activated prote 100.0 5.7E-40 2E-44 362.6 16.6 282 399-701 61-355 (464)
114 3gni_B Strad alpha; kinase fol 100.0 2.5E-40 8.6E-45 358.8 13.4 282 400-702 25-334 (389)
115 3i6u_A CDS1, serine/threonine- 100.0 8.2E-40 2.8E-44 357.4 17.5 255 397-701 132-399 (419)
116 4e5w_A Tyrosine-protein kinase 100.0 1.4E-40 4.8E-45 347.8 10.8 273 401-707 22-301 (302)
117 3brb_A Proto-oncogene tyrosine 100.0 4.3E-40 1.5E-44 346.1 14.3 272 400-711 34-311 (313)
118 3uzp_A CKI-delta, CKID, casein 100.0 9.2E-40 3.2E-44 340.6 16.7 269 400-713 9-285 (296)
119 1rjb_A FL cytokine receptor; k 100.0 3.9E-40 1.3E-44 351.3 14.2 272 400-711 45-337 (344)
120 1t46_A HOMO sapiens V-KIT hard 100.0 3.9E-40 1.3E-44 346.3 14.0 272 400-711 23-310 (313)
121 2ycf_A Serine/threonine-protei 100.0 2E-39 6.9E-44 342.3 19.5 255 397-701 7-274 (322)
122 3lzb_A Epidermal growth factor 100.0 1.4E-40 4.7E-45 351.7 10.5 259 400-709 15-279 (327)
123 4ecn_A Leucine-rich repeat pro 100.0 4.3E-39 1.5E-43 376.6 24.2 343 2-359 454-842 (876)
124 1k9a_A Carboxyl-terminal SRC k 100.0 9.2E-40 3.2E-44 360.5 17.3 253 400-709 193-446 (450)
125 2i0e_A Protein kinase C-beta I 100.0 3.8E-40 1.3E-44 350.8 13.5 249 399-701 19-276 (353)
126 3qyz_A Mitogen-activated prote 100.0 2.7E-40 9.3E-45 355.1 12.5 286 400-702 27-314 (364)
127 2pvf_A Fibroblast growth facto 100.0 3.7E-40 1.2E-44 349.9 13.2 273 400-713 35-323 (334)
128 1rdq_E PKA C-alpha, CAMP-depen 100.0 5E-40 1.7E-44 349.8 14.2 245 400-701 41-293 (350)
129 2buj_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 349.1 11.0 270 400-709 29-307 (317)
130 3kfa_A Tyrosine-protein kinase 100.0 4.9E-40 1.7E-44 341.3 13.5 261 400-711 13-274 (288)
131 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-40 4.8E-45 350.5 9.6 280 399-714 29-316 (318)
132 2v62_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 351.1 13.1 271 400-708 37-328 (345)
133 3nsz_A CK II alpha, casein kin 100.0 1.2E-39 4.2E-44 345.3 16.7 277 400-701 36-319 (330)
134 3kn6_A Ribosomal protein S6 ki 100.0 5.1E-40 1.8E-44 346.9 13.7 258 398-701 6-270 (325)
135 2x4f_A Myosin light chain kina 100.0 1.2E-39 4E-44 350.4 16.6 247 405-701 94-342 (373)
136 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-38 5.5E-43 367.6 27.3 347 2-361 58-584 (635)
137 2eue_A Carbon catabolite derep 100.0 5.3E-40 1.8E-44 338.6 13.2 247 400-701 13-262 (275)
138 3c1x_A Hepatocyte growth facto 100.0 4E-40 1.4E-44 353.7 12.7 264 402-714 91-361 (373)
139 4eut_A Serine/threonine-protei 100.0 7.4E-40 2.5E-44 355.6 14.7 283 401-709 10-310 (396)
140 1mp8_A Focal adhesion kinase 1 100.0 3.8E-40 1.3E-44 340.8 11.8 259 400-710 15-278 (281)
141 3pls_A Macrophage-stimulating 100.0 1.9E-39 6.6E-44 338.5 17.2 266 402-715 23-294 (298)
142 3g2f_A Bone morphogenetic prot 100.0 5.9E-40 2E-44 348.7 13.5 287 399-713 12-323 (336)
143 3f66_A Hepatocyte growth facto 100.0 8.8E-40 3E-44 341.1 14.4 264 401-713 26-296 (298)
144 3mdy_A Bone morphogenetic prot 100.0 4.4E-39 1.5E-43 342.1 20.0 287 394-711 31-334 (337)
145 1b6c_B TGF-B superfamily recep 100.0 4.4E-39 1.5E-43 342.8 19.9 276 394-710 36-338 (342)
146 4aw2_A Serine/threonine-protei 100.0 1.2E-39 4.3E-44 355.6 15.9 257 400-702 74-339 (437)
147 1opk_A P150, C-ABL, proto-onco 100.0 5.1E-40 1.7E-44 366.6 13.0 257 401-708 221-478 (495)
148 2xir_A Vascular endothelial gr 100.0 6.1E-40 2.1E-44 345.3 12.8 273 400-711 27-313 (316)
149 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-38 4.7E-43 378.8 25.7 334 2-356 10-393 (844)
150 3is5_A Calcium-dependent prote 100.0 1.1E-39 3.9E-44 337.9 14.3 255 398-701 20-278 (285)
151 2wqm_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44 344.8 12.0 271 398-714 30-303 (310)
152 2h34_A Serine/threonine-protei 100.0 7E-40 2.4E-44 343.6 12.7 264 398-711 32-299 (309)
153 3hko_A Calcium/calmodulin-depe 100.0 2E-39 7E-44 345.9 16.3 268 397-701 23-330 (345)
154 3dtc_A Mitogen-activated prote 100.0 4.8E-40 1.7E-44 338.1 11.0 250 400-706 7-271 (271)
155 1qcf_A Haematopoetic cell kina 100.0 4.8E-40 1.6E-44 363.4 11.6 258 400-710 188-446 (454)
156 2r5t_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 352.4 11.3 247 400-700 38-288 (373)
157 3v8s_A RHO-associated protein 100.0 1E-39 3.4E-44 353.7 13.5 254 400-702 69-330 (410)
158 2jam_A Calcium/calmodulin-depe 100.0 1.9E-39 6.6E-44 339.6 15.3 253 397-701 6-261 (304)
159 1cm8_A Phosphorylated MAP kina 100.0 5.4E-40 1.8E-44 352.5 11.2 280 401-702 26-308 (367)
160 3sv0_A Casein kinase I-like; t 100.0 2.4E-39 8.1E-44 357.7 16.6 265 400-710 7-280 (483)
161 2a19_B Interferon-induced, dou 100.0 1E-39 3.4E-44 338.1 12.8 260 396-711 7-277 (284)
162 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-39 4.6E-44 341.7 13.9 248 397-701 54-304 (311)
163 3cok_A Serine/threonine-protei 100.0 1.8E-39 6.3E-44 335.1 14.7 249 400-701 11-262 (278)
164 1t4h_A Serine/threonine-protei 100.0 3E-39 1E-43 335.7 16.2 250 402-701 28-282 (290)
165 3bhy_A Death-associated protei 100.0 3.7E-39 1.3E-43 333.8 16.8 260 398-708 3-274 (283)
166 2ac3_A MAP kinase-interacting 100.0 1.7E-39 5.7E-44 342.0 14.4 268 401-701 13-295 (316)
167 1mqb_A Ephrin type-A receptor 100.0 1.2E-39 4E-44 345.6 13.2 262 401-712 45-313 (333)
168 2qr7_A Ribosomal protein S6 ki 100.0 6.3E-40 2.2E-44 348.1 11.1 255 397-702 19-278 (342)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.3E-40 1.5E-44 348.4 9.9 278 396-701 30-318 (329)
170 1ziw_A TOLL-like receptor 3; i 100.0 4.2E-38 1.4E-42 367.1 27.6 338 2-355 10-416 (680)
171 2jii_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 350.2 11.6 269 401-713 43-341 (352)
172 3mtl_A Cell division protein k 100.0 1.5E-40 5.2E-45 351.1 6.2 270 401-701 3-281 (324)
173 3a62_A Ribosomal protein S6 ki 100.0 1.4E-39 4.8E-44 343.9 13.6 248 400-701 17-276 (327)
174 3dbq_A Dual specificity protei 100.0 9.4E-40 3.2E-44 347.9 12.3 251 401-702 10-274 (343)
175 3mi9_A Cell division protein k 100.0 2.3E-39 7.7E-44 346.3 15.2 286 400-702 17-312 (351)
176 3kk8_A Calcium/calmodulin depe 100.0 1.8E-39 6E-44 336.4 13.9 252 400-702 6-262 (284)
177 2zmd_A Dual specificity protei 100.0 1.2E-39 4E-44 352.7 13.1 251 401-702 57-321 (390)
178 3fdn_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 336.1 13.1 247 400-702 9-258 (279)
179 2y7j_A Phosphorylase B kinase 100.0 6.2E-39 2.1E-43 344.2 18.4 256 396-701 90-359 (365)
180 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2E-39 6.8E-44 348.6 14.6 260 401-714 66-345 (365)
181 3t9t_A Tyrosine-protein kinase 100.0 1.9E-39 6.6E-44 332.8 13.8 256 400-708 8-264 (267)
182 1nxk_A MAP kinase-activated pr 100.0 2.6E-39 8.8E-44 351.1 15.5 257 400-702 61-322 (400)
183 2z63_A TOLL-like receptor 4, v 100.0 1.4E-38 4.9E-43 363.3 22.3 344 2-361 58-560 (570)
184 4aaa_A Cyclin-dependent kinase 100.0 4.5E-40 1.5E-44 348.7 9.1 280 399-702 24-307 (331)
185 3ll6_A Cyclin G-associated kin 100.0 3.3E-39 1.1E-43 343.0 15.8 265 401-711 29-311 (337)
186 1p4o_A Insulin-like growth fac 100.0 2.7E-40 9.2E-45 349.1 7.2 268 400-708 25-299 (322)
187 1ua2_A CAK, cell division prot 100.0 2E-39 6.9E-44 345.8 13.9 280 398-702 8-292 (346)
188 2w1i_A JAK2; chromosomal rearr 100.0 7E-40 2.4E-44 346.5 10.1 275 400-711 41-325 (326)
189 2vd5_A DMPK protein; serine/th 100.0 1.3E-39 4.6E-44 352.9 12.5 255 400-701 61-327 (412)
190 2yfx_A Tyrosine-protein kinase 100.0 6.2E-40 2.1E-44 347.0 9.7 270 398-711 28-307 (327)
191 2fst_X Mitogen-activated prote 100.0 5.2E-40 1.8E-44 352.3 9.1 270 400-702 29-312 (367)
192 1qpc_A LCK kinase; alpha beta 100.0 2.5E-39 8.6E-44 334.3 13.4 259 400-711 13-272 (279)
193 2i1m_A Macrophage colony-stimu 100.0 1.2E-39 4.2E-44 345.8 11.4 270 401-710 47-328 (333)
194 4ejn_A RAC-alpha serine/threon 100.0 6.9E-40 2.3E-44 361.6 9.8 249 399-701 147-404 (446)
195 1u5q_A Serine/threonine protei 100.0 1.5E-39 5.1E-44 346.3 12.0 249 399-702 53-306 (348)
196 3llt_A Serine/threonine kinase 100.0 4E-39 1.4E-43 345.7 15.4 198 399-620 34-261 (360)
197 3lij_A Calcium/calmodulin depe 100.0 4.9E-39 1.7E-43 359.4 16.6 258 398-707 35-299 (494)
198 3kmu_A ILK, integrin-linked ki 100.0 1.9E-39 6.5E-44 333.5 12.2 255 399-708 9-270 (271)
199 1byg_A CSK, protein (C-termina 100.0 1.4E-39 4.9E-44 336.0 11.1 254 400-710 21-275 (278)
200 3mwu_A Calmodulin-domain prote 100.0 6.7E-39 2.3E-43 357.7 17.4 253 398-702 20-277 (486)
201 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.3E-38 1.5E-42 358.2 24.4 317 2-340 58-516 (562)
202 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-38 7.3E-43 360.1 21.8 178 2-191 32-211 (549)
203 3gxj_A TGF-beta receptor type- 100.0 4.3E-41 1.5E-45 351.9 -0.7 269 400-709 3-298 (303)
204 1u59_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 334.4 13.8 262 401-713 10-277 (287)
205 3o6n_A APL1; leucine-rich repe 100.0 5.4E-38 1.9E-42 340.6 23.5 314 19-361 43-356 (390)
206 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.6E-39 5.4E-44 358.8 11.4 258 401-711 185-443 (452)
207 3lm5_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 338.8 15.8 258 396-702 24-288 (327)
208 3oja_B Anopheles plasmodium-re 100.0 5.8E-38 2E-42 359.1 24.4 312 20-360 50-361 (597)
209 1x8b_A WEE1HU, WEE1-like prote 100.0 4E-39 1.4E-43 334.2 13.3 249 398-701 9-279 (289)
210 3cc6_A Protein tyrosine kinase 100.0 2.6E-39 9.1E-44 334.5 11.7 259 400-710 12-275 (281)
211 2h6d_A 5'-AMP-activated protei 100.0 6.1E-39 2.1E-43 330.8 14.4 250 399-702 10-262 (276)
212 2acx_A G protein-coupled recep 100.0 2.5E-39 8.6E-44 361.3 12.2 252 401-701 185-444 (576)
213 1xbb_A Tyrosine-protein kinase 100.0 3E-39 1E-43 335.9 11.9 259 401-711 17-282 (291)
214 2z7x_B TOLL-like receptor 1, v 100.0 3.7E-38 1.2E-42 355.6 21.6 316 2-339 27-486 (520)
215 1fvr_A Tyrosine-protein kinase 100.0 2.4E-39 8.4E-44 342.5 11.3 269 399-711 24-303 (327)
216 2vgo_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 331.9 14.0 246 400-701 14-262 (284)
217 3nyv_A Calmodulin-domain prote 100.0 5.4E-39 1.9E-43 358.6 14.1 254 397-702 23-282 (484)
218 3q5i_A Protein kinase; CDPK, m 100.0 1E-38 3.5E-43 357.8 16.2 252 399-702 35-302 (504)
219 2xrw_A Mitogen-activated prote 100.0 1.1E-38 3.6E-43 343.4 15.7 282 400-702 25-319 (371)
220 3a7i_A MST3 kinase, serine/thr 100.0 8.7E-39 3E-43 334.4 14.5 248 401-702 23-271 (303)
221 3eb0_A Putative uncharacterize 100.0 5E-39 1.7E-43 347.7 13.0 288 400-708 7-330 (383)
222 2rku_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 334.6 12.6 248 401-702 16-266 (294)
223 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.9E-39 3.4E-43 355.9 15.6 250 401-696 186-438 (543)
224 2wtk_C Serine/threonine-protei 100.0 1.1E-38 3.7E-43 334.0 14.6 257 398-702 3-264 (305)
225 2owb_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 341.4 11.8 249 400-702 41-292 (335)
226 2ozo_A Tyrosine-protein kinase 100.0 2.5E-38 8.7E-43 361.2 18.5 257 407-714 343-604 (613)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 3.2E-39 1.1E-43 345.4 10.2 274 400-701 11-305 (353)
228 2j7t_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 338.8 8.6 253 400-701 19-275 (302)
229 3o6n_A APL1; leucine-rich repe 100.0 2.1E-37 7.1E-42 336.1 24.3 330 2-363 51-380 (390)
230 3e3p_A Protein kinase, putativ 100.0 1.4E-38 4.9E-43 341.4 14.9 289 397-702 20-315 (360)
231 2clq_A Mitogen-activated prote 100.0 1E-38 3.6E-43 332.4 13.3 250 405-701 27-278 (295)
232 1phk_A Phosphorylase kinase; g 100.0 1.4E-38 5E-43 331.9 13.9 254 398-701 15-283 (298)
233 4exu_A Mitogen-activated prote 100.0 5.1E-39 1.7E-43 345.9 10.7 268 401-702 43-324 (371)
234 2w5a_A Serine/threonine-protei 100.0 2.4E-39 8.2E-44 334.4 7.8 257 400-703 6-269 (279)
235 2vwi_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 336.7 9.5 269 400-701 15-287 (303)
236 3com_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 331.9 16.3 253 397-701 26-278 (314)
237 3eqc_A Dual specificity mitoge 100.0 4.3E-39 1.5E-43 345.4 9.7 199 399-620 32-232 (360)
238 3pg1_A Mitogen-activated prote 100.0 5.7E-39 2E-43 344.8 10.4 278 396-702 18-317 (362)
239 2r3i_A Cell division protein k 100.0 7.7E-39 2.6E-43 334.2 11.0 275 400-701 3-283 (299)
240 3fme_A Dual specificity mitoge 100.0 3.8E-39 1.3E-43 334.8 8.6 255 400-701 7-266 (290)
241 3pfq_A PKC-B, PKC-beta, protei 100.0 2.6E-38 8.9E-43 364.4 16.2 249 399-701 340-597 (674)
242 4fl3_A Tyrosine-protein kinase 100.0 1.7E-38 5.7E-43 363.5 14.5 253 406-710 375-633 (635)
243 3byv_A Rhoptry kinase; malaria 100.0 1.3E-39 4.5E-44 351.4 5.1 257 401-708 74-368 (377)
244 2i6l_A Mitogen-activated prote 100.0 4.4E-38 1.5E-42 331.6 16.5 285 399-701 10-305 (320)
245 1j1b_A Glycogen synthase kinas 100.0 2.8E-38 9.7E-43 345.3 15.4 280 401-701 55-336 (420)
246 2h8h_A Proto-oncogene tyrosine 100.0 5.8E-39 2E-43 361.3 10.1 259 400-711 267-526 (535)
247 1vzo_A Ribosomal protein S6 ki 100.0 7.9E-39 2.7E-43 342.1 10.6 255 400-702 54-322 (355)
248 3kvw_A DYRK2, dual specificity 100.0 3.8E-38 1.3E-42 345.2 15.6 197 400-620 97-301 (429)
249 3rgf_A Cyclin-dependent kinase 100.0 3.3E-38 1.1E-42 343.9 14.8 211 400-620 20-238 (405)
250 3an0_A Dual specificity mitoge 100.0 1.3E-38 4.5E-43 338.8 10.9 255 400-701 51-310 (340)
251 1zy4_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 329.5 13.7 260 398-701 4-283 (303)
252 4e7w_A Glycogen synthase kinas 100.0 3.5E-38 1.2E-42 341.8 14.1 277 401-702 41-322 (394)
253 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-38 4.4E-43 343.0 10.5 257 402-701 64-352 (371)
254 2pml_X PFPK7, Ser/Thr protein 100.0 4.9E-38 1.7E-42 335.6 14.9 271 400-701 31-322 (348)
255 3oja_B Anopheles plasmodium-re 100.0 7.3E-37 2.5E-41 350.0 24.8 337 2-370 57-393 (597)
256 2wei_A Calmodulin-domain prote 100.0 9.6E-38 3.3E-42 323.8 15.9 255 395-701 17-276 (287)
257 3coi_A Mitogen-activated prote 100.0 2.1E-38 7.2E-43 339.0 10.1 269 400-702 24-306 (353)
258 3uqc_A Probable conserved tran 100.0 1.2E-37 4E-42 322.3 14.3 237 398-711 29-268 (286)
259 2iwi_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 331.3 10.5 246 396-702 27-284 (312)
260 1u46_A ACK-1, activated CDC42 100.0 2E-38 6.8E-43 329.6 8.4 259 400-708 18-284 (291)
261 3a99_A Proto-oncogene serine/t 100.0 5.2E-38 1.8E-42 331.0 11.5 245 396-701 39-293 (320)
262 2x7f_A TRAF2 and NCK-interacti 100.0 9.9E-38 3.4E-42 330.0 13.4 257 400-701 24-286 (326)
263 1wak_A Serine/threonine-protei 100.0 1.7E-37 6E-42 337.6 15.4 284 398-701 35-391 (397)
264 1blx_A Cyclin-dependent kinase 100.0 3.2E-37 1.1E-41 326.1 16.4 280 400-701 11-296 (326)
265 1z57_A Dual specificity protei 100.0 2.2E-37 7.5E-42 329.1 14.7 278 398-701 12-328 (339)
266 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.2E-38 2.1E-42 330.5 10.2 260 400-711 33-305 (319)
267 3cek_A Dual specificity protei 100.0 1.5E-37 5.2E-42 326.6 12.9 251 401-702 29-293 (313)
268 1o6v_A Internalin A; bacterial 100.0 7.6E-36 2.6E-40 331.5 26.8 319 2-358 52-389 (466)
269 3fhr_A MAP kinase-activated pr 100.0 8.4E-38 2.9E-42 331.6 10.4 258 398-702 26-288 (336)
270 4fmz_A Internalin; leucine ric 100.0 1.3E-35 4.6E-40 316.5 26.9 304 19-356 42-345 (347)
271 2j0j_A Focal adhesion kinase 1 100.0 2E-37 7E-42 355.8 12.5 258 400-709 390-652 (656)
272 1ogq_A PGIP-2, polygalacturona 100.0 2.3E-36 7.9E-41 317.0 18.2 254 105-361 51-308 (313)
273 3aln_A Dual specificity mitoge 100.0 2.5E-37 8.4E-42 327.1 10.8 258 401-701 23-285 (327)
274 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-35 1.1E-39 311.5 26.2 299 11-332 18-331 (332)
275 2vx3_A Dual specificity tyrosi 100.0 9.4E-37 3.2E-41 329.7 14.6 200 399-620 53-260 (382)
276 4fmz_A Internalin; leucine ric 100.0 5.6E-35 1.9E-39 311.8 27.9 297 2-334 50-346 (347)
277 1q8y_A SR protein kinase; tran 100.0 6.8E-37 2.3E-41 330.0 13.2 283 400-701 19-333 (373)
278 3qa8_A MGC80376 protein; kinas 100.0 4.9E-37 1.7E-41 345.9 12.4 288 397-708 11-309 (676)
279 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-35 9.9E-40 340.3 27.6 332 11-357 45-555 (635)
280 2eu9_A Dual specificity protei 100.0 7.9E-37 2.7E-41 327.0 12.8 198 399-620 18-241 (355)
281 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-35 9.2E-40 312.0 24.0 283 2-308 39-331 (332)
282 1ogq_A PGIP-2, polygalacturona 100.0 6.5E-36 2.2E-40 313.6 18.9 253 79-336 50-307 (313)
283 2dyl_A Dual specificity mitoge 100.0 4E-37 1.4E-41 324.1 9.4 253 400-702 25-284 (318)
284 1xku_A Decorin; proteoglycan, 100.0 5.6E-35 1.9E-39 309.4 25.1 289 22-332 32-330 (330)
285 2rio_A Serine/threonine-protei 100.0 8.6E-37 3E-41 335.1 11.6 255 403-701 18-295 (434)
286 3p23_A Serine/threonine-protei 100.0 1.9E-36 6.4E-41 331.3 13.2 249 401-701 25-283 (432)
287 1o6v_A Internalin A; bacterial 100.0 6.9E-35 2.4E-39 323.7 25.8 301 2-339 74-393 (466)
288 1xku_A Decorin; proteoglycan, 100.0 2.2E-34 7.6E-39 304.7 26.2 288 45-354 31-329 (330)
289 3dzo_A Rhoptry kinase domain; 100.0 4.5E-36 1.5E-40 327.2 12.3 249 403-701 81-363 (413)
290 2pzi_A Probable serine/threoni 100.0 2.9E-36 9.9E-41 349.8 11.4 247 399-708 79-328 (681)
291 3m2w_A MAP kinase-activated pr 100.0 1.4E-35 4.8E-40 309.4 12.1 236 400-702 17-257 (299)
292 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-33 5E-38 310.8 25.4 291 2-335 48-353 (457)
293 3bz5_A Internalin-J, INLJ; leu 100.0 2.3E-33 7.8E-38 309.2 23.9 306 9-356 31-351 (457)
294 2vuw_A Serine/threonine-protei 100.0 7.1E-35 2.4E-39 309.4 9.0 197 398-619 18-278 (336)
295 2z66_A Variable lymphocyte rec 100.0 4.9E-33 1.7E-37 291.1 16.5 281 77-363 5-293 (306)
296 2z80_A TOLL-like receptor 2, v 100.0 3.8E-33 1.3E-37 298.1 15.3 278 21-314 31-318 (353)
297 1jl5_A Outer protein YOPM; leu 100.0 1.9E-32 6.5E-37 301.6 20.1 255 2-287 17-291 (454)
298 3zyj_A Leucine-rich repeat-con 100.0 6E-32 2.1E-36 297.7 22.3 258 76-340 40-298 (440)
299 2z80_A TOLL-like receptor 2, v 100.0 8.7E-33 3E-37 295.4 14.9 283 42-339 28-319 (353)
300 3zyi_A Leucine-rich repeat-con 100.0 8.2E-32 2.8E-36 297.8 21.7 257 77-340 52-309 (452)
301 1jl5_A Outer protein YOPM; leu 100.0 3.3E-31 1.1E-35 291.7 25.6 263 45-358 131-410 (454)
302 2z66_A Variable lymphocyte rec 100.0 1.1E-31 3.8E-36 280.8 19.5 279 24-340 10-293 (306)
303 1z7x_W Ribonuclease inhibitor; 100.0 3.5E-34 1.2E-38 318.1 -4.1 347 2-356 9-410 (461)
304 3zyi_A Leucine-rich repeat-con 100.0 8.4E-31 2.9E-35 289.7 22.5 247 23-286 56-303 (452)
305 1ozn_A Reticulon 4 receptor; N 100.0 3.5E-31 1.2E-35 274.0 18.1 252 82-339 14-266 (285)
306 3zyj_A Leucine-rich repeat-con 100.0 1.2E-30 4.1E-35 287.4 22.3 247 23-286 45-292 (440)
307 3oja_A Leucine-rich immune mol 100.0 1.5E-31 5.2E-36 297.3 14.6 234 80-329 35-270 (487)
308 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-33 5E-38 313.0 -1.9 342 2-356 34-439 (461)
309 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-30 6.3E-35 268.6 19.8 254 106-363 13-267 (285)
310 4fcg_A Uncharacterized protein 100.0 1.1E-29 3.6E-34 267.9 21.6 227 19-262 79-314 (328)
311 3o53_A Protein LRIM1, AGAP0063 100.0 2.1E-31 7E-36 280.0 8.4 243 81-339 36-281 (317)
312 3o53_A Protein LRIM1, AGAP0063 100.0 1.3E-31 4.5E-36 281.5 6.8 253 2-281 16-270 (317)
313 4fcg_A Uncharacterized protein 100.0 1.8E-29 6.3E-34 266.1 20.0 235 80-336 82-316 (328)
314 3g06_A SSPH2 (leucine-rich rep 100.0 6.5E-29 2.2E-33 281.6 25.6 263 21-339 40-302 (622)
315 3g06_A SSPH2 (leucine-rich rep 100.0 1.2E-28 4.3E-33 279.3 26.4 264 2-322 46-309 (622)
316 1wwl_A Monocyte differentiatio 100.0 3.7E-31 1.3E-35 277.4 5.1 202 127-335 94-310 (312)
317 1wwl_A Monocyte differentiatio 100.0 2.1E-30 7.3E-35 271.6 8.0 248 18-287 40-310 (312)
318 3oja_A Leucine-rich immune mol 100.0 1.2E-29 4E-34 282.1 10.2 234 21-280 34-269 (487)
319 2z62_A TOLL-like receptor 4, v 100.0 9E-28 3.1E-32 247.1 18.9 209 129-339 29-242 (276)
320 4azs_A Methyltransferase WBDD; 100.0 7.8E-30 2.7E-34 287.4 2.2 187 407-618 241-438 (569)
321 2z62_A TOLL-like receptor 4, v 100.0 1.5E-27 5.1E-32 245.5 18.4 226 82-313 10-240 (276)
322 2o6q_A Variable lymphocyte rec 99.9 1.5E-26 5.1E-31 237.1 20.4 207 76-311 13-219 (270)
323 2o6q_A Variable lymphocyte rec 99.9 2.3E-26 7.9E-31 235.6 20.2 207 129-339 17-223 (270)
324 1p9a_G Platelet glycoprotein I 99.9 2.5E-26 8.7E-31 237.5 18.6 198 105-310 11-208 (290)
325 1p9a_G Platelet glycoprotein I 99.9 4.3E-26 1.5E-30 235.8 18.1 207 123-337 5-211 (290)
326 3rfs_A Internalin B, repeat mo 99.9 3.5E-26 1.2E-30 234.5 14.0 204 125-340 38-241 (272)
327 3rfs_A Internalin B, repeat mo 99.9 6E-26 2E-30 232.8 14.9 229 21-274 19-247 (272)
328 2xwt_C Thyrotropin receptor; s 99.9 4.8E-26 1.7E-30 228.8 13.9 196 105-331 32-236 (239)
329 2xwt_C Thyrotropin receptor; s 99.9 1.1E-25 3.7E-30 226.3 14.7 197 153-355 32-237 (239)
330 3goz_A Leucine-rich repeat-con 99.9 1.3E-26 4.4E-31 248.2 5.6 256 50-336 3-299 (362)
331 3goz_A Leucine-rich repeat-con 99.9 8.7E-27 3E-31 249.5 3.7 233 2-262 4-266 (362)
332 2ast_B S-phase kinase-associat 99.9 1.8E-25 6.1E-30 237.0 9.8 251 80-340 48-312 (336)
333 4glp_A Monocyte differentiatio 99.9 4.8E-25 1.6E-29 230.7 12.7 199 105-310 92-307 (310)
334 4ay9_X Follicle-stimulating ho 99.9 7.1E-25 2.4E-29 233.4 14.1 243 80-332 10-257 (350)
335 2ca6_A RAN GTPase-activating p 99.9 1.7E-26 5.9E-31 249.7 1.6 265 36-329 23-338 (386)
336 4glp_A Monocyte differentiatio 99.9 5.1E-25 1.7E-29 230.5 11.6 200 128-334 91-307 (310)
337 2ca6_A RAN GTPase-activating p 99.9 3.5E-26 1.2E-30 247.2 2.4 242 95-338 24-320 (386)
338 4ay9_X Follicle-stimulating ho 99.9 2.7E-24 9.1E-29 229.0 16.6 221 81-308 32-257 (350)
339 2ast_B S-phase kinase-associat 99.9 1.4E-25 5E-30 237.7 6.3 257 45-319 47-315 (336)
340 3m19_A Variable lymphocyte rec 99.9 6.1E-24 2.1E-28 215.1 17.7 182 76-262 11-192 (251)
341 3m19_A Variable lymphocyte rec 99.9 6.6E-24 2.3E-28 214.8 17.9 180 105-312 15-194 (251)
342 1h6u_A Internalin H; cell adhe 99.9 4.1E-24 1.4E-28 223.1 15.3 211 81-311 21-231 (308)
343 3ogk_B Coronatine-insensitive 99.9 3.9E-26 1.3E-30 261.6 -0.7 271 81-355 222-524 (592)
344 1h6u_A Internalin H; cell adhe 99.9 1.1E-23 3.7E-28 219.9 16.7 193 126-335 39-231 (308)
345 3ogk_B Coronatine-insensitive 99.9 8.1E-26 2.8E-30 259.0 0.6 319 2-336 170-528 (592)
346 3en9_A Glycoprotease, O-sialog 99.9 6.2E-25 2.1E-29 246.1 5.4 185 404-619 340-539 (540)
347 2o6s_A Variable lymphocyte rec 99.9 2.1E-22 7.2E-27 197.6 14.6 181 24-225 10-190 (208)
348 2p1m_B Transport inhibitor res 99.9 8.2E-25 2.8E-29 250.7 -4.5 324 17-356 101-493 (594)
349 2o6s_A Variable lymphocyte rec 99.9 2.5E-22 8.5E-27 197.0 13.6 183 80-298 8-190 (208)
350 3cvr_A Invasion plasmid antige 99.9 7.8E-22 2.7E-26 220.8 17.0 191 80-322 60-255 (571)
351 2xot_A Amphoterin-induced prot 99.9 6.2E-22 2.1E-26 211.5 12.9 185 73-262 12-202 (361)
352 2p1m_B Transport inhibitor res 99.9 1.9E-23 6.4E-28 239.4 1.1 344 2-356 111-518 (594)
353 1zar_A RIO2 kinase; serine kin 99.9 2.3E-22 7.9E-27 206.4 8.7 131 402-563 92-240 (282)
354 3cvr_A Invasion plasmid antige 99.9 1.1E-21 3.7E-26 219.7 14.6 189 46-274 60-255 (571)
355 2xot_A Amphoterin-induced prot 99.9 1.1E-21 3.9E-26 209.5 13.1 176 24-213 21-202 (361)
356 2v70_A SLIT-2, SLIT homolog 2 99.9 1.1E-21 3.7E-26 194.0 11.3 153 155-311 14-167 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 1.7E-21 5.9E-26 192.5 11.3 153 155-311 14-166 (220)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 3.8E-21 1.3E-25 190.1 13.7 161 73-238 5-166 (220)
359 1h6t_A Internalin B; cell adhe 99.8 7E-21 2.4E-25 196.8 15.0 169 20-213 45-213 (291)
360 1h6t_A Internalin B; cell adhe 99.8 3.5E-21 1.2E-25 199.1 12.3 166 81-262 26-191 (291)
361 2v9t_B SLIT homolog 2 protein 99.8 8.2E-21 2.8E-25 187.6 14.0 161 74-263 6-166 (220)
362 1m9s_A Internalin B; cell inva 99.8 1.4E-21 4.8E-26 221.3 8.8 168 21-213 21-188 (605)
363 1m9s_A Internalin B; cell inva 99.8 1.4E-20 4.8E-25 213.1 16.0 192 3-222 28-219 (605)
364 3sb4_A Hypothetical leucine ri 99.8 1.2E-20 4.1E-25 199.0 10.2 286 20-328 24-328 (329)
365 1dce_A Protein (RAB geranylger 99.8 5.4E-23 1.9E-27 231.5 -8.5 204 42-280 346-567 (567)
366 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.6E-24 180.2 15.9 132 129-262 41-172 (229)
367 3e6j_A Variable lymphocyte rec 99.8 1.1E-19 3.9E-24 180.7 14.5 152 24-190 22-173 (229)
368 1dce_A Protein (RAB geranylger 99.8 4.4E-22 1.5E-26 224.1 -4.0 200 80-304 350-567 (567)
369 4b8c_D Glucose-repressible alc 99.8 1.7E-20 6E-25 217.8 8.4 192 133-336 206-406 (727)
370 3sb4_A Hypothetical leucine ri 99.8 1.2E-20 4.2E-25 198.9 6.4 272 44-340 24-316 (329)
371 1xeu_A Internalin C; cellular 99.8 3.1E-20 1.1E-24 188.8 8.3 78 81-165 21-98 (263)
372 1xeu_A Internalin C; cellular 99.8 2.7E-20 9.1E-25 189.3 7.7 166 130-311 21-186 (263)
373 4ezg_A Putative uncharacterize 99.8 2.7E-19 9.2E-24 173.6 11.7 105 127-236 43-147 (197)
374 4b8c_D Glucose-repressible alc 99.8 2.3E-20 7.9E-25 216.7 3.7 190 94-310 215-404 (727)
375 4fdw_A Leucine rich hypothetic 99.8 4.5E-18 1.5E-22 183.1 21.2 267 44-335 112-384 (401)
376 1w8a_A SLIT protein; signaling 99.8 2.3E-19 7.7E-24 173.3 9.2 174 179-360 11-186 (192)
377 1zth_A RIO1 serine protein kin 99.8 2.2E-19 7.5E-24 182.0 9.1 138 402-566 49-220 (258)
378 4fdw_A Leucine rich hypothetic 99.8 5.7E-18 2E-22 182.3 20.4 268 18-310 110-383 (401)
379 4ezg_A Putative uncharacterize 99.8 1E-18 3.5E-23 169.6 13.1 153 100-262 41-194 (197)
380 1w8a_A SLIT protein; signaling 99.8 3.6E-18 1.2E-22 164.8 13.8 155 203-361 11-166 (192)
381 2wfh_A SLIT homolog 2 protein 99.7 4E-18 1.4E-22 164.5 10.4 130 203-337 13-142 (193)
382 2wfh_A SLIT homolog 2 protein 99.7 1.5E-17 5.2E-22 160.4 11.9 136 73-213 4-139 (193)
383 2o6r_A Variable lymphocyte rec 99.7 2.4E-17 8.2E-22 156.9 11.8 137 75-215 3-139 (177)
384 2ell_A Acidic leucine-rich nuc 99.7 3.4E-17 1.2E-21 154.4 11.6 135 80-218 25-164 (168)
385 2ell_A Acidic leucine-rich nuc 99.7 4E-17 1.4E-21 153.9 11.3 136 200-338 24-164 (168)
386 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 147.6 10.5 127 176-305 17-148 (149)
387 2o6r_A Variable lymphocyte rec 99.7 1.6E-16 5.5E-21 151.1 11.8 109 230-338 33-141 (177)
388 4gyi_A RIO2 kinase; protein ki 99.7 2.6E-17 8.8E-22 172.8 5.8 138 402-568 97-268 (397)
389 2je0_A Acidic leucine-rich nuc 99.7 1.3E-16 4.4E-21 147.1 9.4 129 199-330 16-149 (149)
390 4fs7_A Uncharacterized protein 99.7 1.4E-15 4.8E-20 164.3 18.7 293 11-329 61-374 (394)
391 1a9n_A U2A', U2A'; complex (nu 99.6 4.6E-16 1.6E-20 147.8 8.9 134 123-263 14-154 (176)
392 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5E-22 161.5 -1.6 153 175-335 17-186 (198)
393 1ds9_A Outer arm dynein; leuci 99.6 1.1E-17 3.7E-22 162.4 -3.9 151 152-310 18-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.6 4.4E-16 1.5E-20 147.9 7.2 134 196-336 15-155 (176)
395 3g39_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 139.9 10.0 113 73-189 3-115 (170)
396 4fs7_A Uncharacterized protein 99.6 3.4E-14 1.2E-18 153.4 16.1 292 7-326 81-393 (394)
397 4gt6_A Cell surface protein; l 99.6 1.2E-13 4E-18 149.2 20.3 301 11-334 53-370 (394)
398 2r9u_A Variable lymphocyte rec 99.5 1.5E-14 5.1E-19 136.7 10.6 113 73-189 6-118 (174)
399 3g39_A Variable lymphocyte rec 99.5 1.7E-14 5.9E-19 135.8 9.7 106 202-311 11-116 (170)
400 2r9u_A Variable lymphocyte rec 99.5 2.9E-14 9.8E-19 134.8 9.9 105 106-213 14-118 (174)
401 4gt6_A Cell surface protein; l 99.5 1E-12 3.5E-17 141.8 20.1 300 32-355 50-368 (394)
402 3un9_A NLR family member X1; l 99.4 3.5E-15 1.2E-19 159.0 -3.3 134 81-215 103-254 (372)
403 3un9_A NLR family member X1; l 99.4 1.3E-14 4.5E-19 154.5 -1.3 184 79-263 72-284 (372)
404 2ifg_A High affinity nerve gro 99.4 5.2E-13 1.8E-17 141.5 9.3 104 82-189 11-116 (347)
405 2ifg_A High affinity nerve gro 99.4 1.2E-12 3.9E-17 138.8 10.7 102 205-310 13-116 (347)
406 4h09_A Hypothetical leucine ri 99.3 1E-10 3.4E-15 125.4 22.3 292 19-336 44-347 (379)
407 4h09_A Hypothetical leucine ri 99.3 2.5E-10 8.6E-15 122.3 23.2 286 11-321 59-356 (379)
408 3tm0_A Aminoglycoside 3'-phosp 99.2 1.3E-11 4.4E-16 125.2 9.4 142 400-563 14-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 6.5E-10 2.2E-14 112.3 10.6 128 409-563 29-213 (264)
410 2ra8_A Uncharacterized protein 99.0 2.2E-10 7.5E-15 120.8 6.4 203 105-332 108-341 (362)
411 2ra8_A Uncharacterized protein 99.0 2.8E-10 9.7E-15 120.0 5.8 88 122-213 166-265 (362)
412 3dxp_A Putative acyl-COA dehyd 99.0 2.2E-09 7.6E-14 113.9 11.5 145 405-565 43-249 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.7 3E-09 1E-13 110.1 3.1 190 405-618 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.5 1.6E-08 5.6E-13 100.9 0.3 62 248-311 169-234 (267)
415 3r70_A Aminoglycoside phosphot 98.5 2.5E-07 8.5E-12 96.3 8.9 133 404-564 41-237 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 4.7E-08 1.6E-12 92.8 2.8 121 193-334 29-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.4 4.1E-08 1.4E-12 93.2 1.7 122 168-310 28-164 (185)
418 3rw6_A Nuclear RNA export fact 98.4 5.7E-08 1.9E-12 97.0 2.6 79 223-303 169-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 1.5E-06 5.1E-11 88.0 10.1 135 407-563 31-222 (272)
420 3d1u_A Putative fructosamine-3 98.3 1.9E-06 6.7E-11 87.7 10.8 75 405-489 20-97 (288)
421 3tdw_A Gentamicin resistance p 98.3 2E-06 7E-11 88.7 10.4 135 406-563 25-223 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1E-05 3.5E-10 85.4 11.5 75 405-490 46-122 (362)
423 3ats_A Putative uncharacterize 98.1 1.6E-05 5.4E-10 83.9 11.7 84 406-491 26-122 (357)
424 2olc_A MTR kinase, methylthior 97.9 2E-05 7E-10 84.4 9.8 76 405-487 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.9 4.2E-06 1.4E-10 77.3 3.6 83 129-211 62-150 (176)
426 3e4g_A ATP synthase subunit S, 97.9 7.1E-06 2.4E-10 75.8 3.8 83 225-308 62-150 (176)
427 2q83_A YTAA protein; 2635576, 97.8 0.00019 6.7E-09 74.9 13.4 151 407-563 39-251 (346)
428 3jr1_A Putative fructosamine-3 97.5 0.0005 1.7E-08 70.4 11.2 74 406-489 42-118 (312)
429 3f7w_A Putative fructosamine-3 97.5 0.00037 1.3E-08 70.9 10.1 75 404-488 19-96 (288)
430 1pgv_A TMD-1, tropomodulin TMD 97.3 5.7E-05 1.9E-09 71.1 1.7 86 127-212 69-169 (197)
431 3rfe_A Platelet glycoprotein I 97.3 0.00016 5.4E-09 63.7 4.4 52 4-58 16-68 (130)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 5.7E-05 2E-09 71.1 1.3 84 105-188 71-169 (197)
433 3dxq_A Choline/ethanolamine ki 97.3 0.00098 3.4E-08 68.2 10.4 71 405-489 23-95 (301)
434 3rfe_A Platelet glycoprotein I 97.2 0.00049 1.7E-08 60.5 6.2 37 129-165 32-68 (130)
435 2qg7_A Ethanolamine kinase PV0 97.2 0.0025 8.7E-08 68.9 12.9 74 406-489 114-188 (458)
436 2pyw_A Uncharacterized protein 97.1 0.00065 2.2E-08 73.2 7.7 81 533-615 231-313 (420)
437 2ppq_A HSK, HK, homoserine kin 97.1 0.0021 7.3E-08 66.2 10.7 154 406-563 28-216 (322)
438 1nw1_A Choline kinase (49.2 KD 97.0 0.0017 5.8E-08 69.9 9.8 74 405-489 78-159 (429)
439 3feg_A Choline/ethanolamine ki 97.0 0.0011 3.9E-08 69.7 7.4 148 406-563 56-253 (379)
440 3csv_A Aminoglycoside phosphot 96.8 0.0061 2.1E-07 63.2 11.7 32 533-564 182-217 (333)
441 1zyl_A Hypothetical protein YI 96.8 0.0035 1.2E-07 64.8 9.5 79 407-489 33-114 (328)
442 3c5i_A Choline kinase; choline 96.7 0.0045 1.5E-07 65.2 10.1 75 405-489 38-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.4 0.019 6.4E-07 59.6 11.9 31 534-564 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.0 0.028 9.4E-07 59.4 10.6 30 534-563 244-279 (401)
445 3mes_A Choline kinase; malaria 95.8 0.036 1.2E-06 59.1 10.4 75 405-489 75-157 (424)
446 2yle_A Protein spire homolog 1 95.6 0.014 4.8E-07 55.1 5.8 102 488-617 34-135 (229)
447 3g15_A CK, chetk-alpha, cholin 93.1 0.41 1.4E-05 50.7 10.8 28 536-563 246-279 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 78.1 0.21 7.2E-06 53.9 -2.5 60 404-466 146-213 (463)
449 4ann_A ESSB; membrane protein, 76.6 3.6 0.00012 38.7 5.8 90 507-627 76-166 (215)
450 4ano_A ESSB; membrane protein, 73.1 5.7 0.00019 37.5 6.2 81 508-619 81-163 (219)
451 2lz0_A Uncharacterized protein 72.3 6.9 0.00024 31.8 5.8 47 115-162 7-53 (100)
452 2lz0_A Uncharacterized protein 65.2 11 0.00038 30.5 5.7 47 138-185 6-52 (100)
453 1cja_A Protein (actin-fragmin 26.6 2.9E+02 0.0099 27.7 9.5 77 476-564 156-237 (342)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-53 Score=433.84 Aligned_cols=262 Identities=26% Similarity=0.397 Sum_probs=199.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
.+++.++||+|+||+||+|++.. .||||+++.... ...+.+.+|+.++++++|||||+++++|. ++..|
T Consensus 37 ~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~~~ 107 (307)
T 3omv_A 37 EVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDNLA 107 (307)
T ss_dssp SCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCE
T ss_pred HeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCeEE
Confidence 45678899999999999998752 489999874332 23467889999999999999999999863 23579
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+|||||++|+|.+++... ...+++.++..|+.||++||+|||++ +||||||||+|||+++++.+||+|
T Consensus 108 iVmEy~~gGsL~~~l~~~---------~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~D 175 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQ---------ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGD 175 (307)
T ss_dssp EEEECCSSCBHHHHHHTS---------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECC
T ss_pred EEEEcCCCCCHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEee
Confidence 999999999999999643 24589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccC--CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh-c
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-V 635 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~--~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-~ 635 (741)
||+|+...............||+.|||||.+.. .+.|+.++|||||||++|||+||+.||....... .+...+.. .
T Consensus 176 FGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~ 254 (307)
T 3omv_A 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGY 254 (307)
T ss_dssp CSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTC
T ss_pred ccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCC
Confidence 999987654433333344679999999965542 3468999999999999999999999986321111 11111111 1
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
..+... . ...++++.+.+|+.+||+.||++||||.||++.|+.+...++
T Consensus 255 ~~p~~~--------~-------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 255 ASPDLS--------K-------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCCCST--------T-------------------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCCCcc--------c-------------------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 111000 0 012456778899999999999999999999999998875543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.3e-52 Score=435.34 Aligned_cols=267 Identities=24% Similarity=0.355 Sum_probs=201.4
Q ss_pred HHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 402 FLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
|.+.++||+|+||.||+|+++ .+++.||||+++.......+++.+|+++|++++|||||+++++|. +...
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~~~ 117 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-----EGRP 117 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SSSS
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCE
Confidence 455678999999999999875 368899999998655555678999999999999999999999964 4557
Q ss_pred EEEEEecccCCChhhhccCCCCCCc-----ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADK-----TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
.|+|||||++|+|.++++....... .......+++.+++.|+.||++||+|||+. +||||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 8999999999999999975432111 111235689999999999999999999999 99999999999999999
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~ 630 (741)
+.+||+|||+|+...............||+.|||| |+..+..++.++|||||||++|||+| |+.||...... ....
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP-E~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~ 271 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAID 271 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCH-HHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccCh-hhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence 99999999999876554443333446799999999 55677889999999999999999999 89998632111 1111
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
.+.... +...+..+++.+.+|+.+||+.||++||||+||++.|+.+.+.
T Consensus 272 ~i~~g~------------------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQGR------------------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHTC------------------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHcCC------------------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 110000 0011124567788999999999999999999999999998764
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.5e-53 Score=434.21 Aligned_cols=269 Identities=23% Similarity=0.358 Sum_probs=208.8
Q ss_pred HHHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 401 SFLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.|.+.++||+|+||.||+|++. .++..||||+++.......+++.+|+++|++++|||||+++++|. +++
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~~ 88 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EGD 88 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SSS
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----eCC
Confidence 4567789999999999999875 357899999998655555678999999999999999999999963 455
Q ss_pred eEEEEEecccCCChhhhccCCCCC---CcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGA---DKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
..|+|||||++|+|.++++..+.. .........+++.+++.|+.||++||+|||++ +||||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 789999999999999999743100 00011235689999999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~ 631 (741)
.+||+|||+|+...............||+.|||| |+..+..++.++|||||||++|||+| |+.||...... .+...
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP-E~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~ 242 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIEC 242 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCH-HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCH-HHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999876554433333345699999999 55566789999999999999999999 89998632111 11111
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
+. .... ...+..+++.+.+|+.+||+.||++|||++||.+.|+++.+..
T Consensus 243 i~-----------~~~~-------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 243 IT-----------QGRV-------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HH-----------HTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HH-----------cCCC-------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 10 0000 0011245677889999999999999999999999999987643
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.5e-52 Score=434.10 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=204.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|+++++||+|+||.||+|+++.+|+.||||+++.......+.+.+|+.+|++++|||||+++++ +.+++..|+|
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-----~~~~~~~~iv 149 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVV 149 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEE-----EEETTEEEEE
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEE-----EEECCEEEEE
Confidence 48889999999999999999999999999999987666667788999999999999999999999 4556789999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg 560 (741)
||||+||+|.+++.. ..+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||
T Consensus 150 mEy~~gg~L~~~l~~-----------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 215 (346)
T 4fih_A 150 MEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG 215 (346)
T ss_dssp ECCCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCc
Confidence 999999999999863 3488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcch
Q 037916 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640 (741)
Q Consensus 561 ~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (741)
+|+........ ....+||+.||||| +..+..|+.++||||+||++|||++|+.||.... .......+....+...
T Consensus 216 la~~~~~~~~~--~~~~~GTp~YmAPE-vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~~ 290 (346)
T 4fih_A 216 FCAQVSKEVPR--RKSLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPRL 290 (346)
T ss_dssp TCEECCSSSCC--BCCCCSCGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSCCCC
T ss_pred CceecCCCCCc--ccccccCcCcCCHH-HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCC
Confidence 99877544322 23367999999995 5677789999999999999999999999986321 1111111111111000
Q ss_pred hHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 641 MDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 641 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.....+.+.+.+++.+||+.||++|||+.|+++
T Consensus 291 ----------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 291 ----------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ----------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001123456789999999999999999999875
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-51 Score=429.92 Aligned_cols=257 Identities=21% Similarity=0.262 Sum_probs=204.0
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEEE
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVY 481 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv~ 481 (741)
|++.++||+|+||.||+|+++.+|+.||||+++... ...+|+.++++++|||||+++++ +.++...|+||
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~-----~~~~~~~~ivm 129 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGA-----VREGPWVNIFM 129 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEE-----EEETTEEEEEE
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEE-----EEECCEEEEEE
Confidence 667788999999999999999999999999997432 22479999999999999999999 45567899999
Q ss_pred ecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC-ceEEeecc
Q 037916 482 EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM-TAHVADFG 560 (741)
Q Consensus 482 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL~DFg 560 (741)
|||+||+|.++++.. ..+++.+++.++.||+.||+|||++ +||||||||+|||++.+| ++||+|||
T Consensus 130 Ey~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFG 196 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM----------GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFG 196 (336)
T ss_dssp CCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCT
T ss_pred eccCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCC
Confidence 999999999999643 4689999999999999999999999 999999999999999987 69999999
Q ss_pred cccccCCCCccc---ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 561 LAKLLPPAHLQT---SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 561 ~a~~~~~~~~~~---~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
+|+......... .....+||+.|||| |+..+..|+.++||||+||++|||++|+.||........ +....... +
T Consensus 197 la~~~~~~~~~~~~~~~~~~~GT~~YmAP-E~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~-~ 273 (336)
T 4g3f_A 197 HALCLQPDGLGKSLLTGDYIPGTETHMAP-EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP-P 273 (336)
T ss_dssp TCEEC------------CCCCCCGGGCCH-HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC-C
T ss_pred CCeEccCCCcccceecCCccccCccccCH-HHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC-C
Confidence 998775443211 12235799999999 555678899999999999999999999999974322211 11111100 0
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcC
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLG 712 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 712 (741)
... ..+..+++.+.+++.+||+.||++|||+.|+++.|....+....
T Consensus 274 -~~~---------------------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~ 320 (336)
T 4g3f_A 274 -PIR---------------------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320 (336)
T ss_dssp -GGG---------------------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred -Cch---------------------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence 000 00123456788999999999999999999999999988876553
No 6
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.4e-51 Score=427.39 Aligned_cols=265 Identities=22% Similarity=0.318 Sum_probs=205.7
Q ss_pred HHHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 401 SFLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+++.++||+|+||.||+|++. .+++.||||+++.... ...+.+.+|+.++++++|||||+++++|. .+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KD 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----EC
Confidence 3567889999999999999974 3678999999974332 33567899999999999999999999964 34
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCc------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADK------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll 548 (741)
...++|||||++|+|.+++........ .......+++.++.+|+.||++||+|||++ +||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 578999999999999999964321110 111235689999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcc
Q 037916 549 DHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMN 627 (741)
Q Consensus 549 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~ 627 (741)
++++.+||+|||+|+...............||+.||||| +..++.++.++|||||||++|||+| |..||..... ..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE-~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~ 255 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE-AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QD 255 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHH-HHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 999999999999998765444333344467999999995 5566789999999999999999998 8999863211 11
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSI 706 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 706 (741)
+...+.. .... +.+.++++.+.+|+.+||+.||++||||.||++.|+.+
T Consensus 256 ~~~~i~~-----------~~~~-------------------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 VVEMIRN-----------RQVL-------------------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHT-----------TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHc-----------CCCC-------------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111110 0000 01124567789999999999999999999999999764
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-51 Score=424.99 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=204.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||+||+|+++.+++.||+|++++. .....+.+.+|++++++++|||||+++++ ++++..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 3589999999999999999999999999999999742 23445678999999999999999999999 566779
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+|||||+||+|.+++... ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~----------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEE
Confidence 99999999999999999643 5689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+|+..............+||+.||||| +..+..|+.++||||+||++|||++|+.||.... .......
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPE-vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~-- 245 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAK-- 245 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHH-HHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHH-HHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH--
Confidence 9999999876544333344567999999995 5567789999999999999999999999996321 1111111
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+.. .... .+....+.+.+++.+||+.||++|||++|++.
T Consensus 246 ------i~~----~~~~----------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 246 ------IIK----LEYD----------------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ------HHH----TCCC----------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ------HHc----CCCC----------------CCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 110 0000 00122345779999999999999999999753
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.1e-51 Score=414.95 Aligned_cols=247 Identities=21% Similarity=0.302 Sum_probs=187.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
++|++++.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++|||||+++++ +.+++.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECCE
Confidence 68999999999999999999999999999999997432 2334578899999999999999999999 556778
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+ +|+|.+++... ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~----------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQR----------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHS----------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEE
Confidence 99999999 78999998643 4689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+|+........ ...+||+.|||||.+.....++.++||||+||++|+|++|+.||... ........
T Consensus 154 ~DFGla~~~~~~~~~---~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~-- 223 (275)
T 3hyh_A 154 ADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKN-- 223 (275)
T ss_dssp CCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHH--
T ss_pred eecCCCeecCCCCcc---CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHH--
Confidence 999999876543322 23579999999965544445678999999999999999999999632 11111111
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+.... .. .+...++.+.+++.+||+.||++|||++|+++
T Consensus 224 ------i~~~~----~~----------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 224 ------ISNGV----YT----------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------HHHTC----CC----------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ------HHcCC----CC----------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 00000 00 00122456789999999999999999999986
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-51 Score=431.62 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=195.6
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
+|+++++||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.++++++|||||+++++ +.++...|
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~-----~~~~~~~y 99 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES-----FEENGSLY 99 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-----EEETTEEE
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEE-----EEECCEEE
Confidence 58899999999999999999999999999999975332 234678899999999999999999999 45667899
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+|||||+||+|.+++...+ ...+++.+++.|+.||+.||+|||++ |||||||||+|||++.+|.+||+|
T Consensus 100 iVmEy~~gg~L~~~i~~~~--------~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 168 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQK--------GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGD 168 (350)
T ss_dssp EEEECCTTCBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECS
T ss_pred EEEeCCCCCcHHHHHHHcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcc
Confidence 9999999999999996431 24578889999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||+|+....... .....+||+.|||| |+..+..|+.++||||+||++|||++|+.||.... ..+....
T Consensus 169 FGla~~~~~~~~--~~~~~~GT~~YmAP-E~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~---- 236 (350)
T 4b9d_A 169 FGIARVLNSTVE--LARACIGTPYYLSP-EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLK---- 236 (350)
T ss_dssp TTEESCCCHHHH--HHHHHHSCCTTCCH-HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHH----
T ss_pred cccceeecCCcc--cccccCCCccccCH-HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHH----
Confidence 999987643221 12235699999999 55667789999999999999999999999996321 1111111
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+........ ...+++.+.+|+.+||+.||++|||+.|+++
T Consensus 237 ----i~~~~~~~~-------------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 237 ----IISGSFPPV-------------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----HHHTCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHcCCCCCC-------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111000000 0123456789999999999999999999985
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.9e-51 Score=435.64 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=204.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|+++++||+|+||.||+|+++.+|+.||||+++.......+.+.+|+.+|++++|||||+++++ +.+++..|+|
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-----~~~~~~~~iV 226 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVV 226 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEE-----EEETTEEEEE
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEE-----EEECCEEEEE
Confidence 48899999999999999999999999999999987666667789999999999999999999999 4556789999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg 560 (741)
||||+||+|.++++. ..+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||
T Consensus 227 mEy~~gG~L~~~i~~-----------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFG 292 (423)
T 4fie_A 227 MEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG 292 (423)
T ss_dssp EECCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCT
T ss_pred EeCCCCCcHHHHHhc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCc
Confidence 999999999999863 3488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcch
Q 037916 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640 (741)
Q Consensus 561 ~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (741)
+|+........ ....+||+.|||| |+..+..|+.++||||+||++|||++|+.||.... .......+....+...
T Consensus 293 la~~~~~~~~~--~~~~~GTp~YmAP-Evl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~~ 367 (423)
T 4fie_A 293 FCAQVSKEVPR--RKSLVGTPYWMAP-ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPRL 367 (423)
T ss_dssp TCEECCSSCCC--BCCCEECTTTCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCC
T ss_pred cceECCCCCcc--ccccccCcCcCCH-HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCC
Confidence 99877544322 2336799999999 45677789999999999999999999999986221 1111111111111000
Q ss_pred hHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 641 MDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 641 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. ....+.+.+.+|+.+||+.||++|||+.|+++
T Consensus 368 ---------~-------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 368 ---------K-------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---------S-------------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------c-------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 00123456789999999999999999999875
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9.2e-51 Score=416.13 Aligned_cols=249 Identities=25% Similarity=0.340 Sum_probs=194.5
Q ss_pred HHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 403 LFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 403 ~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
++.++||+|+||.||+|++..++..||+|++.... ....+.+.+|+.++++++|||||+++++|.... ..+...|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 56678999999999999999999999999997432 223456889999999999999999999864321 234568999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeCC-CCceEEe
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLDH-EMTAHVA 557 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~~-~~~~kL~ 557 (741)
||||+||+|.+++... ..+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+
T Consensus 108 mEy~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~ 174 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF----------KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred EeCCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEE
Confidence 9999999999999643 5689999999999999999999998 6 999999999999984 7899999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||+|+...... ....+||+.|||||.+ . +.|+.++|||||||++|||+||+.||.... ...........
T Consensus 175 DFGla~~~~~~~----~~~~~GTp~YmAPE~~-~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~ 244 (290)
T 3fpq_A 175 DLGLATLKRASF----AKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTS 244 (290)
T ss_dssp CTTGGGGCCTTS----BEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTT
T ss_pred eCcCCEeCCCCc----cCCcccCccccCHHHc-C-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHc
Confidence 999998644322 2235799999999644 4 469999999999999999999999986321 11111111111
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
......+ ...+.+.+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 245 GVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCC--------------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000 0112345789999999999999999999875
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.5e-50 Score=423.33 Aligned_cols=272 Identities=20% Similarity=0.234 Sum_probs=209.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC-----CCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCC-CceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE-----GKTIIAVKVLNLLHH-GASKSSIAECSALRNIRH-KNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~ 472 (741)
..|++.+.||+|+||.||+|++.. +++.||||+++.... ...+.+.+|+.+|+++.| ||||+++++|. .
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~----~ 139 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----K 139 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----C
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE----e
Confidence 457788999999999999999864 346899999974332 234578899999999965 99999999973 3
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCc------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADK------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NI 546 (741)
.+...|+|||||++|+|.++++..+.... .......+++.+++.++.||++||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 44578999999999999999975422100 011234589999999999999999999999 999999999999
Q ss_pred EeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCC
Q 037916 547 LLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGN 625 (741)
Q Consensus 547 ll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~ 625 (741)
|+++++.+||+|||+|+...............||+.||||| +..+..|+.++|||||||++|||+| |+.||......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE-~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~- 294 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 294 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHH-HHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999998776554433344467999999995 5566789999999999999999998 89998632111
Q ss_pred cchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHH
Q 037916 626 MNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQS 705 (741)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 705 (741)
..+...+.. .... ..+..+++.+.+++.+||+.||++|||+.||++.|++
T Consensus 295 ~~~~~~i~~------------g~~~------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 295 EEFCRRLKE------------GTRM------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp HHHHHHHHH------------TCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHc------------CCCC------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 111111111 0000 0112345678899999999999999999999999999
Q ss_pred HHHhh
Q 037916 706 IKSIL 710 (741)
Q Consensus 706 i~~~~ 710 (741)
+.+..
T Consensus 345 llq~~ 349 (353)
T 4ase_A 345 LLQAN 349 (353)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98653
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-49 Score=413.01 Aligned_cols=281 Identities=22% Similarity=0.257 Sum_probs=200.0
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|.+.++||+|+||.||+|++. |+.||||+++.... .......|+..+.+++|||||+++++|.... ......|+|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEEE
Confidence 3566789999999999999984 89999999964321 1122334666667889999999999985321 122368999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCceecCCCCCCeEeCCCCceE
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHD-----CQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
||||++|+|.++++. ..+++..+.+++.|++.||+|||++ ..++||||||||+|||++.++.+|
T Consensus 80 ~Ey~~~gsL~~~l~~-----------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ecCCCCCcHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 999999999999963 3588999999999999999999975 245899999999999999999999
Q ss_pred EeecccccccCCCCcc--cccccccccccccCcccccCC-----CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 556 VADFGLAKLLPPAHLQ--TSSIGVKGTIGYIAPAEYGLG-----SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~--~~~~~~~gt~~y~aPEe~~~~-----~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
|+|||+|+........ .......||+.|||||.+... ..++.++|||||||++|||+||..||.........+
T Consensus 149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 9999999876543221 122335699999999654322 246789999999999999999998876433222222
Q ss_pred hhhhhhcCCc-chh-HhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHH
Q 037916 629 HNFARTVLPD-HVM-DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSI 706 (741)
Q Consensus 629 ~~~~~~~~~~-~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 706 (741)
..+....... ... .+.+....+... ......+++..+.+|+.+||+.||++||||.||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p-------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQKLRPNIP-------------NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCC-------------GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcccccchHHHHHHHHhcccCCCCCC-------------ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 2111110000 011 111111111111 0001125667889999999999999999999999999998
Q ss_pred HHh
Q 037916 707 KSI 709 (741)
Q Consensus 707 ~~~ 709 (741)
.+.
T Consensus 296 ~~~ 298 (303)
T 3hmm_A 296 SQQ 298 (303)
T ss_dssp HHC
T ss_pred HHH
Confidence 764
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.5e-50 Score=411.28 Aligned_cols=243 Identities=23% Similarity=0.267 Sum_probs=187.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEc---CCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD---EGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..|++++.||+|+||+||+|++. .+++.||+|+++... ......+.+|+.++++++|||||+++++ ++++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYA-----FQTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEE-----EEET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEEC
Confidence 35889999999999999999983 467899999997432 2234567889999999999999999999 4566
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+|||||+||+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKE----------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCE
Confidence 7899999999999999999643 5689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+........ ....+||+.|||| |+..+..|+.++||||+||++|||++|+.||..... .+....
T Consensus 166 Kl~DFGla~~~~~~~~~--~~~~~GT~~YmAP-E~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~ 237 (304)
T 3ubd_A 166 KLTDFGLSKESIDHEKK--AYSFCGTVEYMAP-EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMTM 237 (304)
T ss_dssp EEESSEEEEC-----CC--CCSCCCCGGGCCH-HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred EecccccceeccCCCcc--ccccccCcccCCH-HHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHHH
Confidence 99999999865443222 2236799999999 455677899999999999999999999999963211 111111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM 696 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 696 (741)
+..... . .+..+++.+.+++.+||+.||++|||+
T Consensus 238 --------i~~~~~----~----------------~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 238 --------ILKAKL----G----------------MPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --------HHHCCC----C----------------CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --------HHcCCC----C----------------CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 110000 0 001234567899999999999999996
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.9e-49 Score=406.14 Aligned_cols=258 Identities=20% Similarity=0.288 Sum_probs=187.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCcc-------
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVD------- 470 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------- 470 (741)
...|++++.||+|+||.||+|+++.+++.||||+++.... ...+.+.+|+.+|++++|||||++++++....
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 3568999999999999999999999999999999975432 23457889999999999999999999874322
Q ss_pred ccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC
Q 037916 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH 550 (741)
Q Consensus 471 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~ 550 (741)
.....+.|+|||||++|+|.+++.... .....++..++.++.||++||+|||++ +|+||||||+|||++.
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~ 153 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC-------TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTM 153 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC-------SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC-------CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECC
Confidence 112335799999999999999997541 113345667889999999999999999 9999999999999999
Q ss_pred CCceEEeecccccccCCCCccc----------ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCc
Q 037916 551 EMTAHVADFGLAKLLPPAHLQT----------SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 551 ~~~~kL~DFg~a~~~~~~~~~~----------~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~ 620 (741)
++.+||+|||+|+......... .....+||+.|||| |+..+..|+.++||||+||++|||++ ||..
T Consensus 154 ~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP-E~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 154 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP-EQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp TCCEEECCCCCC--------------------------CCCTTSCH-HHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CCcEEEccCccceecCCCccccccccccccccccCCcccCccccCH-HHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 9999999999998765432211 12235699999999 55567789999999999999999996 7652
Q ss_pred cccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHH
Q 037916 621 MFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVV 700 (741)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 700 (741)
..+. ...... +. ..... ....+..+.+.+++.+||+.||++|||+.|++
T Consensus 230 ~~~~----~~~~~~--------~~----~~~~p---------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 278 (299)
T 4g31_A 230 QMER----VRTLTD--------VR----NLKFP---------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278 (299)
T ss_dssp HHHH----HHHHHH--------HH----TTCCC---------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccHH----HHHHHH--------Hh----cCCCC---------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 1110 000000 00 00000 01123344567899999999999999999987
Q ss_pred H
Q 037916 701 H 701 (741)
Q Consensus 701 ~ 701 (741)
+
T Consensus 279 ~ 279 (299)
T 4g31_A 279 E 279 (299)
T ss_dssp T
T ss_pred c
Confidence 6
No 16
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-47 Score=450.77 Aligned_cols=357 Identities=32% Similarity=0.523 Sum_probs=325.9
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCcc-CCCCCCCcEEEeecCcCcccCCchhhhhh-hhhhc--ccc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSS-MFNASKLEVFQVTSNNLTGEVPSEFGKAT-KAYCV--QNC 77 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~~~~~--~~~ 77 (741)
||++|++.+.+|..+. .+++|++|+|++|++++.+|.. |.++++|++|+|++|++++.+|..+..++ ++..+ ..|
T Consensus 300 ~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N 378 (768)
T 3rgz_A 300 DLSGNHFYGAVPPFFG-SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378 (768)
T ss_dssp ECCSSEEEECCCGGGG-GCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSS
T ss_pred ECcCCcCCCccchHHh-cCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCC
Confidence 6888999988898887 8999999999999998777765 88999999999999999988888887765 32211 111
Q ss_pred --------------CCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEccccccccc
Q 037916 78 --------------NQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT 143 (741)
Q Consensus 78 --------------~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~ 143 (741)
..+|++|+|++|++++..|..+..++ +|++|+|++|++.+..|..|..+++|++|+|++|++++.
T Consensus 379 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 457 (768)
T 3rgz_A 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 457 (768)
T ss_dssp EEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred CcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCc
Confidence 34699999999999989999999998 999999999999999999999999999999999999999
Q ss_pred CCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccccc
Q 037916 144 ISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDL 223 (741)
Q Consensus 144 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 223 (741)
.|..|..+++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|.+|+.+++|++|+|++|++++.+|..+.++
T Consensus 458 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 537 (768)
T 3rgz_A 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGC
T ss_pred CCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEcCCCccCCCCChhh----------------------------------------------------------
Q 037916 224 TSLSVGLDLSRNQLVGSLPTEV---------------------------------------------------------- 245 (741)
Q Consensus 224 ~~L~~~L~Ls~N~l~~~~p~~~---------------------------------------------------------- 245 (741)
++|+. |++++|.+++.+|..+
T Consensus 538 ~~L~~-L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 616 (768)
T 3rgz_A 538 RSLIW-LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 616 (768)
T ss_dssp TTCCE-EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTT
T ss_pred CCCCE-EECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccc
Confidence 99998 9999999987777543
Q ss_pred ------------cCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCcc
Q 037916 246 ------------GKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEI 313 (741)
Q Consensus 246 ------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (741)
+.+++|+.|||++|++++.+|..|+.+++|+.|+|++|++++.+|..|+++++|+.|||++|+++|.+
T Consensus 617 ~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~i 696 (768)
T 3rgz_A 617 SRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696 (768)
T ss_dssp SCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECC
T ss_pred cceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcC
Confidence 33578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccccCCcccccCcccccccCCccccCCcccccccCCCCccccC
Q 037916 314 PKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGI 361 (741)
Q Consensus 314 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 361 (741)
|..+..++.|+.|+|++|+++|.+|..++|..+....+.||+.+||.+
T Consensus 697 p~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 697 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred ChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 999999999999999999999999999999999999999999999975
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-48 Score=415.53 Aligned_cols=274 Identities=19% Similarity=0.183 Sum_probs=202.6
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCc-cccCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGV-DYKGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-~~~~~~~~ 477 (741)
+|++++.||+|+||.||+|+++.+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++... .+.+....
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 58999999999999999999999999999999974322 2245678999999999999999999987543 24456789
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+|||||+ |+|.+++... ..+++.+++.+++||+.||+|||++ |||||||||+|||++.++.+||+
T Consensus 135 ~ivmE~~~-g~L~~~i~~~----------~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~ 200 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHSS----------QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIG 200 (398)
T ss_dssp EEEEECCS-EEHHHHHTSS----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEEC
T ss_pred EEEEeCCC-CCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEe
Confidence 99999995 6899998643 5689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCc--ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 558 DFGLAKLLPPAHL--QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 558 DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|||+|+....... .......+||+.|+|||.+....+++.++||||+||++|||++|+.||...... ..+.......
T Consensus 201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~ 279 (398)
T 4b99_A 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVL 279 (398)
T ss_dssp CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHH
T ss_pred ecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhc
Confidence 9999987643321 222334679999999966665667899999999999999999999999632111 1111111111
Q ss_pred CCcc-----------hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 636 LPDH-----------VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 636 ~~~~-----------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... ....+......... ..........+.+.+|+.+||..||++|||+.|+++
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPV------------PWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCC------------CHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCC------------CHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000 00000000000000 000001123456789999999999999999999886
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-46 Score=400.47 Aligned_cols=197 Identities=24% Similarity=0.319 Sum_probs=166.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEc---CCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++.++||+|+||.||+|+++ .+++.||+|++... ....++.+|+.+++.+ +|||||+++++ +.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~-----~~~~~ 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYC-----FRKND 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEE-----EEETT
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEE-----EEECC
Confidence 46999999999999999999874 46789999998643 3345678999999998 69999999998 55677
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC-Cce
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE-MTA 554 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~-~~~ 554 (741)
+.|+||||+++|+|.+++. .+++.+++.+++|++.||+|||++ ||+||||||+|||++.+ +.+
T Consensus 94 ~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred EEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 9999999999999999984 378889999999999999999999 99999999999999876 799
Q ss_pred EEeecccccccCCCCcc--------------------------cccccccccccccCcccccCCCCCCCccCchhHHHHH
Q 037916 555 HVADFGLAKLLPPAHLQ--------------------------TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILL 608 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il 608 (741)
||+|||+|+........ ......+||+.|+|||.+.....|+.++||||+||++
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il 237 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH
Confidence 99999999865433211 0112346999999996665556799999999999999
Q ss_pred HHHHcCCCCCC
Q 037916 609 LELMTRKRPSD 619 (741)
Q Consensus 609 ~elltg~~p~~ 619 (741)
|||++|+.||.
T Consensus 238 ~ell~G~~Pf~ 248 (361)
T 4f9c_A 238 LSLLSGRYPFY 248 (361)
T ss_dssp HHHHHTCSSSS
T ss_pred HHHHHCCCCCC
Confidence 99999999985
No 19
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.9e-45 Score=429.84 Aligned_cols=359 Identities=33% Similarity=0.470 Sum_probs=300.6
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCch-hhhhhhhhhc------
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSE-FGKATKAYCV------ 74 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~~~~~------ 74 (741)
||++|++.+.+|..++..+++|++|+|++|++++..|..|.++++|++|+|++|++++.+|.. |..++++..+
T Consensus 275 ~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~ 354 (768)
T 3rgz_A 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354 (768)
T ss_dssp ECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSE
T ss_pred ECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCc
Confidence 689999999999999855699999999999999999999999999999999999999888866 8887763211
Q ss_pred ---------cccCCCccEEECcCCcCcccCCchhhc--ccccccEEEccCCcccccCCccccCCCCccEEEccccccccc
Q 037916 75 ---------QNCNQHLKHLDINNNNFGGLLPGCICN--FSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT 143 (741)
Q Consensus 75 ---------~~~~~~L~~L~Ls~N~l~~~~~~~~~~--l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~ 143 (741)
..+..+|++|+|++|++++..|..+.. +. +|++|++++|++.+..|..|..+++|++|+|++|++++.
T Consensus 355 l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 433 (768)
T 3rgz_A 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN-TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGT 433 (768)
T ss_dssp EEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTC-CCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESC
T ss_pred cCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccC-CccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCc
Confidence 011124555555555555555554444 44 688888888888778888888888999999999999888
Q ss_pred CCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccccc
Q 037916 144 ISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDL 223 (741)
Q Consensus 144 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 223 (741)
.|..|.++++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+
T Consensus 434 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 513 (768)
T 3rgz_A 434 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred ccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcC
Confidence 88888889999999999999988888889889999999999999988888889999999999999999988899999999
Q ss_pred ccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhh-----------------------------------
Q 037916 224 TSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILST----------------------------------- 268 (741)
Q Consensus 224 ~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~----------------------------------- 268 (741)
++|+. |+|++|++++.+|..++.+++|+.|+|++|++++..|..
T Consensus 514 ~~L~~-L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAI-LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCE-EECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCE-EECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 99987 999999998888889999999999999999887554433
Q ss_pred -----------------------------------ccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCcc
Q 037916 269 -----------------------------------LGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEI 313 (741)
Q Consensus 269 -----------------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (741)
|+.+++|+.|+|++|++++.+|..|+++++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 334577889999999999999999999999999999999999999
Q ss_pred chhhhccccCCcccccCcccccccCCc-cccCCcccccccCCCCccccCCC
Q 037916 314 PKFLVELQLVQNLNLSYNDLEGVIPTE-GVFKNASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 314 ~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~~~ 363 (741)
|..|.++++|+.|||++|+++|.+|.. ..+..++.+++.+| .+.|.+|.
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N-~l~g~iP~ 722 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN-NLSGPIPE 722 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS-EEEEECCS
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC-cccccCCC
Confidence 999999999999999999999888865 55677888898888 46677765
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-45 Score=408.75 Aligned_cols=249 Identities=20% Similarity=0.229 Sum_probs=194.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHH---HHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSI---AECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.|++++.||+|+||.||+|+++.+|+.||+|++++.. ........ .++.+++.++|||||+++++ +++.
T Consensus 190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~~~ 264 (689)
T 3v5w_A 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FHTP 264 (689)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EECS
T ss_pred HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EEEC
Confidence 4666778999999999999999999999999997422 12222233 34566777899999999999 5677
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+|||||+||+|.+++... ..+++..++.++.||+.||+|||++ |||||||||+|||++.+|++
T Consensus 265 ~~lylVmEy~~GGdL~~~l~~~----------~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLSQH----------GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCE
T ss_pred CEEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCE
Confidence 7999999999999999999643 5689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+....... ...+||+.|||||.+..+..|+.++||||+||++|||++|..||......+ .......
T Consensus 332 KL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~ 405 (689)
T 3v5w_A 332 RISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRM 405 (689)
T ss_dssp EECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHH
T ss_pred EecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHh
Confidence 9999999987654432 235799999999666556789999999999999999999999996322111 1111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCC-----HHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMN-----MTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 701 (741)
+...... .+....+.+.+|+.+||+.||++|++ ++||++
T Consensus 406 --------i~~~~~~--------------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 406 --------TLTMAVE--------------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp --------HHHCCCC--------------------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred --------hcCCCCC--------------------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0000000 00123456789999999999999998 577664
No 21
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=392.49 Aligned_cols=346 Identities=21% Similarity=0.222 Sum_probs=319.7
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|.+++.+. .||..++ +++++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++ |
T Consensus 17 ~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~----------L 82 (477)
T 2id5_A 17 LCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN----------L 82 (477)
T ss_dssp ECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT----------C
T ss_pred EeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc----------C
Confidence 34566676 7888876 79999999999999999999999999999999999999999999999987 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+|+++.+..|..+. +|++|+|++|++....+..|..+++|++|+|++|.++++.+..|.++++|++|+|++
T Consensus 83 ~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 161 (477)
T 2id5_A 83 RTLGLRSNRLKLIPLGVFTGLS-NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 161 (477)
T ss_dssp CEEECCSSCCCSCCTTSSTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEES
T ss_pred CEEECCCCcCCccCcccccCCC-CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCC
Confidence 9999999999988888888988 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|+++++.+..|.++++|+.|+|++|.+.+..+..|..+++|++|++++|++.+.+|..+....+|+. |+|++|+|++..
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~-L~l~~n~l~~~~ 240 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTS-LSITHCNLTAVP 240 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSE-EEEESSCCCSCC
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccE-EECcCCcccccC
Confidence 9999888888999999999999999999999999999999999999999988888888888889998 999999999766
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ 321 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 321 (741)
+..|..+++|+.|+|++|.++++.+..|..+++|+.|+|++|++++..|.+|.++++|+.|+|++|+|++..+..|..++
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred cCCcccccCcccccccCCccccCCcccccccCCCCccccCCC
Q 037916 322 LVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 322 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 363 (741)
+|+.|+|++|++.+..+..+.+.......+.++...|..++.
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 999999999999987765555555556677888888987654
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-44 Score=406.43 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=203.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.+|++++.||+|+||.||+|+++.+|+.||+|+++.......+.+.+|+.+|+.++|||||+++++ +.+....|+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~i 231 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVM 231 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEEE
Confidence 568999999999999999999999999999999976554556678899999999999999999999 566779999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC--CceEEe
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE--MTAHVA 557 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~--~~~kL~ 557 (741)
|||||+||+|.+++... ...+++.++..+++||+.||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 232 v~E~~~gg~L~~~i~~~---------~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~ 299 (573)
T 3uto_A 232 IYEFMSGGELFEKVADE---------HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLI 299 (573)
T ss_dssp EEECCCCCBHHHHHTCT---------TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEEC
T ss_pred EEeecCCCcHHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEe
Confidence 99999999999998632 24588999999999999999999999 99999999999999854 799999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||+|+........ ...+||+.|||| |+..+..|+.++||||+||++|||++|..||....... .+.........
T Consensus 300 DFG~a~~~~~~~~~---~~~~GT~~y~AP-Ev~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~~~ 374 (573)
T 3uto_A 300 DFGLTAHLDPKQSV---KVTTGTAEFAAP-EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWN 374 (573)
T ss_dssp CCSSCEECCTTSEE---EEECSSGGGCCH-HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCC
T ss_pred eccceeEccCCCce---eeeEECccccCH-HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCCCC
Confidence 99999987654332 235699999999 55667889999999999999999999999986321110 01100000000
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... ......+.+.+|+.+||+.||++|||+.|+++
T Consensus 375 ------------~~~~----------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 375 ------------MDDS----------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ------------CCSG----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------------CCcc----------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 00122355779999999999999999999986
No 23
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-42 Score=385.30 Aligned_cols=342 Identities=20% Similarity=0.231 Sum_probs=256.3
Q ss_pred CCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcc-cCCchhhhhhhhhhccccCCCc
Q 037916 3 VGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTG-EVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 3 l~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~~~~~~~~~~~L 81 (741)
.+++.+. .+|. +. ++|++|+|++|+|+++.|..|.++++|++|+|++|.+.+ +.+..|.++++ |
T Consensus 17 c~~~~l~-~lp~-l~---~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~----------L 81 (455)
T 3v47_A 17 CINRGLH-QVPE-LP---AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS----------L 81 (455)
T ss_dssp CCSSCCS-SCCC-CC---TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTT----------C
T ss_pred cCCCCcc-cCCC-CC---CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccccccccc----------C
Confidence 4455555 6675 43 778888888888888888888888888888888888864 34567777765 8
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCcc--ccCCCCccEEEcccccccccCCcc-ccCCCcCcEEE
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG--IGKFINLQTLHMWDNQLSGTISPA-IGELQNLVTLA 158 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~--~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~~L~~L~ 158 (741)
++|+|++|++++..|..|..+. +|++|+|++|++.+..+.. |..+++|++|+|++|+|+++.|.. |.++++|++|+
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 160 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLA-NLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCT-TCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEE
T ss_pred CEEeCCCCccCccChhhccCcc-cCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEe
Confidence 8888888888888888888887 8888888888887644443 888888888888888888776665 78888888888
Q ss_pred cccCCCCCcCcccccCC--cccceeeccCcccccccCccc--------ccCCCCCEEeccCccccccCCccccc------
Q 037916 159 INTNKLSGNIPPSIGNL--KKLLQLYLIENFLQVSIPSSL--------GQCQSLTTINLSYNNLSGTIPPQLMD------ 222 (741)
Q Consensus 159 L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~------ 222 (741)
|++|++++..+..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+..
T Consensus 161 L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 240 (455)
T 3v47_A 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240 (455)
T ss_dssp CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCC
T ss_pred CCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccc
Confidence 88888887777777665 456666666666554433322 23455566666666555433332221
Q ss_pred ---------------------------------cccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhc
Q 037916 223 ---------------------------------LTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTL 269 (741)
Q Consensus 223 ---------------------------------l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 269 (741)
.++|+. |++++|.+.+..|..|+.+++|++|+|++|+++++.+..|
T Consensus 241 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 319 (455)
T 3v47_A 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKT-CDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAF 319 (455)
T ss_dssp EEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCE-EECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred eeeEeeccccccccccchhhhccCcccccccccccCceE-EEecCccccccchhhcccCCCCCEEECCCCcccccChhHh
Confidence 146776 8888888887778888888888888888888888888888
Q ss_pred cccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc-cccCCccc
Q 037916 270 GSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE-GVFKNASA 348 (741)
Q Consensus 270 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~ 348 (741)
..+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++.++.. ..++.++.
T Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 320 WGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 88888888888888888777888888888888888888888777888888888888888888888776654 45677888
Q ss_pred ccccCCCCccccC
Q 037916 349 ISVFGNSKLCGGI 361 (741)
Q Consensus 349 ~~~~~n~~~c~~~ 361 (741)
+++.+|++.|..+
T Consensus 400 L~l~~N~l~~~~~ 412 (455)
T 3v47_A 400 IWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCBCCCTT
T ss_pred EEccCCCcccCCC
Confidence 8888888877654
No 24
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.7e-42 Score=397.10 Aligned_cols=346 Identities=19% Similarity=0.176 Sum_probs=264.4
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.|.+|.++++|++|+|++|++++..|..|.++++ |
T Consensus 38 ~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~----------L 106 (606)
T 3vq2_A 38 DLSFNPLKILKSYSFS-NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTS----------L 106 (606)
T ss_dssp ECTTSCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTT----------C
T ss_pred ECCCCCcCEeChhhcc-CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCccc----------C
Confidence 6788888855555655 8888888888888888888888888888888888888888777888888876 7
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccc-cCCccccCCCCccEEEcccccccccCCccccC----------
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFR-SIPAGIGKFINLQTLHMWDNQLSGTISPAIGE---------- 150 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~---------- 150 (741)
++|+|++|++++..+..+..+. +|++|++++|++.+ .+|..|.++++|++|+|++|+++++.+..|..
T Consensus 107 ~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~ 185 (606)
T 3vq2_A 107 ENLVAVETKLASLESFPIGQLI-TLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLS 185 (606)
T ss_dssp CEEECTTSCCCCSSSSCCTTCT-TCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCE
T ss_pred CEEEccCCccccccccccCCCC-CCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccce
Confidence 7777777777766666677776 77777777777755 34677777777777777777766554433222
Q ss_pred --------------------------------------------------------------------------------
Q 037916 151 -------------------------------------------------------------------------------- 150 (741)
Q Consensus 151 -------------------------------------------------------------------------------- 150 (741)
T Consensus 186 L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~ 265 (606)
T 3vq2_A 186 LDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDE 265 (606)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEE
T ss_pred eeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhh
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 037916 151 -------------------------------------------------------------------------------- 150 (741)
Q Consensus 151 -------------------------------------------------------------------------------- 150 (741)
T Consensus 266 l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~ 345 (606)
T 3vq2_A 266 FRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFK 345 (606)
T ss_dssp EEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECC
T ss_pred eeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchh
Confidence
Q ss_pred ---CCcCcEEEcccCCCCCc--CcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCC-ccccccc
Q 037916 151 ---LQNLVTLAINTNKLSGN--IPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIP-PQLMDLT 224 (741)
Q Consensus 151 ---l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 224 (741)
+++|++|+|++|++++. .+..+..+++|++|+|++|.+++ +|..|..+++|++|++++|++++..| ..|.+++
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 424 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLE 424 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCT
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccc
Confidence 12223333333333322 13344444555555555555543 34667777777777777777776666 5778888
Q ss_pred cceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccc-hhhhhccccccccEEEeCCCccCCCCChhcccCccCCeee
Q 037916 225 SLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLEC-EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLD 303 (741)
Q Consensus 225 ~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 303 (741)
+|+. |++++|.+.+..|..|+.+++|++|++++|.+++ ..+..|+.+++|+.|+|++|++++..|..|.++++|+.|+
T Consensus 425 ~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 425 KLLY-LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TCCE-EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCE-EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 8887 8888888888888888899999999999999987 4788899999999999999999998899999999999999
Q ss_pred CCCCcCCCccchhhhccccCCcccccCcccccccCCccccC-CcccccccCCCCccccC
Q 037916 304 LSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFK-NASAISVFGNSKLCGGI 361 (741)
Q Consensus 304 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~~ 361 (741)
|++|++++..|..|..+++|+.|+|++|+++.+++....+. +++.+++.+|++.|.+.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999889999999999999999999998777765665 58999999999999755
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=371.16 Aligned_cols=270 Identities=25% Similarity=0.375 Sum_probs=214.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|.+.+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.++++++||||+++++++ .++...++
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~l 84 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-----YKDKRLNF 84 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEE-----ecCCeeEE
Confidence 4678889999999999999999999999999998655555567788999999999999999999995 34568999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 152 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM---------DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADF 152 (310)
T ss_dssp EEECCTTCBHHHHHHHC---------CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCC
T ss_pred EEEecCCCcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeec
Confidence 99999999999999743 24588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCccc------------ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 560 GLAKLLPPAHLQT------------SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 560 g~a~~~~~~~~~~------------~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
|.+.......... ......||+.|+|| |+..+..++.++|||||||++|||++|..||.........
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP-EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp TTCEECC--------------------CCCCSCGGGCCH-HHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred ccceecccccccccccccccccccccccccCCCcceeCH-HHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 9998765432211 01135699999999 5556778999999999999999999999998643222111
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
... ......+... +..+++.+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 232 ~~~--------~~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 232 FGL--------NVRGFLDRYC----------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp SSB--------CHHHHHHHTC----------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hhh--------hhhccccccC----------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 110 0111111111 1133456889999999999999999999999999999
Q ss_pred HhhcCCcccc
Q 037916 708 SILLGPKTVS 717 (741)
Q Consensus 708 ~~~~~~~~~~ 717 (741)
.......+..
T Consensus 282 ~~~~~~~~~~ 291 (310)
T 3s95_A 282 MHLAGHLPLG 291 (310)
T ss_dssp HHHHHCCCCH
T ss_pred HhccCcccCC
Confidence 8877544443
No 26
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.9e-42 Score=363.00 Aligned_cols=277 Identities=29% Similarity=0.424 Sum_probs=215.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|.+.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++ ......++
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 112 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC-----DERNEMIL 112 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC-----CCTTCCEE
T ss_pred hccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEEE
Confidence 35778889999999999999976 6889999998765555567889999999999999999999995 45568899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 113 v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDL------PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp EEECCTTCBTGGGSSSSCC------CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred EEEcCCCCcHHHHHhccCC------CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 9999999999999864421 124588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCC-cchhhhhhhc-CC
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN-MNLHNFARTV-LP 637 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~-~~ 637 (741)
|.+................||+.|+||| +..+..++.++|||||||++|||++|+.||....... .....+.... ..
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPE-YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHH-HHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred ccccccccccccccccccCCCccccCHH-HhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 9998755433332233356899999995 4456678999999999999999999999987433221 1122221111 11
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
......+++..... ...+++..+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 263 ~~~~~~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 263 GQLEQIVDPNLADK------------------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp TCCCSSSSSSCTTC------------------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ccHHHhcChhhccc------------------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 11111122111111 12366788999999999999999999999999999988643
No 27
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.7e-42 Score=379.07 Aligned_cols=326 Identities=19% Similarity=0.187 Sum_probs=291.7
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccc-cCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCC
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITG-VIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQH 80 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~ 80 (741)
||++|++.+..|..+. .+++|++|+|++|.+.+ +.+..|.++++|++|+|++|++++..|..|.++++
T Consensus 36 ~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~---------- 104 (455)
T 3v47_A 36 DLSLNSIAELNETSFS-RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLAN---------- 104 (455)
T ss_dssp ECCSSCCCEECTTTTS-SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTT----------
T ss_pred EecCCccCcCChhHhc-cCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCccc----------
Confidence 7899999977787777 89999999999999974 55788999999999999999999888999999987
Q ss_pred ccEEECcCCcCcccCCch--hhcccccccEEEccCCcccccCCcc-ccCCCCccEEEcccccccccCCccccCC--CcCc
Q 037916 81 LKHLDINNNNFGGLLPGC--ICNFSITLETLIFNSNKIFRSIPAG-IGKFINLQTLHMWDNQLSGTISPAIGEL--QNLV 155 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~--~~~l~~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~N~i~~~~~~~~~~l--~~L~ 155 (741)
|++|+|++|++++..+.. |..+. +|++|+|++|++.+..|.. |.++++|++|+|++|++++..+..+..+ .+|+
T Consensus 105 L~~L~L~~n~l~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~ 183 (455)
T 3v47_A 105 LEVLTLTQCNLDGAVLSGNFFKPLT-SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFT 183 (455)
T ss_dssp CCEEECTTSCCBTHHHHSSTTTTCT-TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEE
T ss_pred CCEEeCCCCCCCccccCcccccCcc-cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccc
Confidence 999999999999755443 88888 9999999999999887876 8999999999999999999999888876 6788
Q ss_pred EEEcccCCCCCcCcccc--------cCCcccceeeccCcccccccCccccc-----------------------------
Q 037916 156 TLAINTNKLSGNIPPSI--------GNLKKLLQLYLIENFLQVSIPSSLGQ----------------------------- 198 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~--------~~l~~L~~L~L~~N~i~~~~~~~~~~----------------------------- 198 (741)
.|++++|.+.+..+..+ ..+++|++|+|++|.+++..|..+..
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 263 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKD 263 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCC
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhcc
Confidence 88888888886554432 35678888888888887665554432
Q ss_pred ----------CCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhh
Q 037916 199 ----------CQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILST 268 (741)
Q Consensus 199 ----------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 268 (741)
.++|++|++++|++++..|..|..+++|+. |+|++|++.+..|..|..+++|++|+|++|.++++.+..
T Consensus 264 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 264 PDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQ-LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp CCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCE-EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG
T ss_pred CcccccccccccCceEEEecCccccccchhhcccCCCCCE-EECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH
Confidence 268999999999999999999999999998 999999999888999999999999999999999999999
Q ss_pred ccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc
Q 037916 269 LGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 269 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
|..+++|++|+|++|++++..|.+|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++.+|..
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999999999999999999999999999999999999999999888888999999999999999999998854
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.6e-42 Score=361.46 Aligned_cols=250 Identities=21% Similarity=0.268 Sum_probs=202.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.+|++.++||+|+||.||+|.+..+++.||+|++........+.+.+|+.++++++||||+++++++ ..+...++
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~l 94 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELWV 94 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE-----EECCEEEE
Confidence 4688999999999999999999999999999999866666667788999999999999999999995 44568999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 95 v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 160 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 160 (297)
T ss_dssp EEECCTTCBHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEECCCCCCHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeC
Confidence 9999999999999863 3478899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDH 639 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (741)
|++......... .....||+.|+||| +..+..++.++||||+||++|+|++|+.||....... ..........+.
T Consensus 161 g~~~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~- 235 (297)
T 3fxz_A 161 GFCAQITPEQSK--RSTMVGTPYWMAPE-VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPE- 235 (297)
T ss_dssp TTCEECCSTTCC--BCCCCSCGGGCCHH-HHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCC-
T ss_pred CCceecCCcccc--cCCccCCcCccChh-hhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC-
Confidence 999876544322 22356999999995 5566788999999999999999999999986321110 000000000000
Q ss_pred hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 640 VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 640 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. ..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ------------~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 ------------L----------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ------------C----------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------------C----------------CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 001123456789999999999999999999986
No 29
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2e-42 Score=364.92 Aligned_cols=257 Identities=19% Similarity=0.258 Sum_probs=202.3
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
+..+|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++ ..+..
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~ 79 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNI 79 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCe
Confidence 34578999999999999999999999999999999974332 2346788999999999999999999994 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl 146 (323)
T 3tki_A 80 QYLFLEYCSGGELFDRIEPD----------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKI 146 (323)
T ss_dssp EEEEEECCTTEEGGGGSBTT----------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEEcCCCCcHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEE
Confidence 99999999999999998643 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+................||+.|+|||.+.....++.++||||+||++|+|++|+.||.........+..+.....
T Consensus 147 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 226 (323)
T 3tki_A 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226 (323)
T ss_dssp CCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT
T ss_pred EEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc
Confidence 99999986643333232334569999999966655555588999999999999999999999743222222222111110
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
... ........+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~------------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 YLN------------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TST------------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCC------------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000 001234567799999999999999999999864
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.7e-42 Score=365.69 Aligned_cols=250 Identities=20% Similarity=0.251 Sum_probs=199.8
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.+.|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++ .....
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCE
Confidence 3568899999999999999999998999999999974322 2345678999999999999999999994 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl 155 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAH----------GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKI 155 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred EEEEEECCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEE
Confidence 99999999999999998633 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||++........ .....||+.|+|||.+......+.++||||+||++|+|++|+.||.... .......
T Consensus 156 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~-- 225 (328)
T 3fe3_A 156 ADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRER-- 225 (328)
T ss_dssp CSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--
T ss_pred eeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH--
Confidence 99999987654432 2235699999999665544445689999999999999999999986321 1111110
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
...+... .+......+.+++.+||+.||++|||+.|+++.
T Consensus 226 ----------i~~~~~~----------------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 226 ----------VLRGKYR----------------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----------HHHCCCC----------------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----------HHhCCCC----------------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 001123557799999999999999999999863
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.4e-42 Score=392.78 Aligned_cols=301 Identities=19% Similarity=0.229 Sum_probs=136.9
Q ss_pred CCccCC--CCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc-Ccc-cCCchhhcc------cccc
Q 037916 37 IPSSMF--NASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN-FGG-LLPGCICNF------SITL 106 (741)
Q Consensus 37 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~-l~~-~~~~~~~~l------~~~L 106 (741)
+|..++ ++++|++|+|++|++.+.+|..|.++++ |++|+|++|+ +++ .+|..+..+ + +|
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~----------L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~-~L 307 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPE----------MQLINVACNRGISGEQLKDDWQALADAPVGE-KI 307 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSS----------CCEEECTTCTTSCHHHHHHHHHHHHHSGGGG-TC
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCC----------CCEEECcCCCCCccccchHHHHhhhccccCC-CC
Confidence 444444 4444444444444444444444444433 4444444444 444 344444433 3 44
Q ss_pred cEEEccCCcccccCCc--cccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcc-cceeec
Q 037916 107 ETLIFNSNKIFRSIPA--GIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKK-LLQLYL 183 (741)
Q Consensus 107 ~~L~L~~n~i~~~~~~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L 183 (741)
++|+|++|++. .+|. .|.++++|++|+|++|++++.+| .|..+++|++|+|++|+++ .+|..|.++++ |++|+|
T Consensus 308 ~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~L 384 (636)
T 4eco_A 308 QIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSF 384 (636)
T ss_dssp CEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEEC
T ss_pred CEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEc
Confidence 44444444443 3333 44444444444444444443334 4444444444444444444 34444444444 444444
Q ss_pred cCcccccccCcccccCC--CCCEEeccCccccccCCcccc-------ccccceeEEEcCCCccCCCCChhhcCCCCCcEE
Q 037916 184 IENFLQVSIPSSLGQCQ--SLTTINLSYNNLSGTIPPQLM-------DLTSLSVGLDLSRNQLVGSLPTEVGKLINLEIL 254 (741)
Q Consensus 184 ~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 254 (741)
++|.++ .+|..+..++ +|++|++++|++++.+|..|. .+++|+. |+|++|+++...+..+..+++|++|
T Consensus 385 s~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~-L~Ls~N~l~~lp~~~~~~l~~L~~L 462 (636)
T 4eco_A 385 AHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS-INLSNNQISKFPKELFSTGSPLSSI 462 (636)
T ss_dssp CSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE-EECCSSCCCSCCTHHHHTTCCCSEE
T ss_pred cCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE-EECcCCccCcCCHHHHccCCCCCEE
Confidence 444444 3344443332 444444444444444444444 4444444 5555555543333333444555555
Q ss_pred Eeccccccchhhhhccccc-------cccEEEeCCCccCCCCChhcc--cCccCCeeeCCCCcCCCccchhhhccccCCc
Q 037916 255 FISRNMLECEILSTLGSCI-------KLEQLKLGGNLFQGPIPLSLS--SLRGLRVLDLSQNNISGEIPKFLVELQLVQN 325 (741)
Q Consensus 255 ~Ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 325 (741)
+|++|+++.+....+..+. +|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.
T Consensus 463 ~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~ 540 (636)
T 4eco_A 463 NLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKG 540 (636)
T ss_dssp ECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCE
T ss_pred ECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCE
Confidence 5555555433333333222 4555555555555 3333333 45555555555555554 4444445555555
Q ss_pred ccc------cCcccccccCCc-cccCCcccccccCCC
Q 037916 326 LNL------SYNDLEGVIPTE-GVFKNASAISVFGNS 355 (741)
Q Consensus 326 L~l------~~N~l~~~~~~~-~~~~~~~~~~~~~n~ 355 (741)
|+| ++|.+.+.+|.. ..++.++.+++.+|.
T Consensus 541 L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 577 (636)
T 4eco_A 541 FGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSND 577 (636)
T ss_dssp EECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred EECCCCcccccCcccccChHHHhcCCCCCEEECCCCc
Confidence 555 234444433322 334445555555543
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=379.89 Aligned_cols=334 Identities=22% Similarity=0.247 Sum_probs=251.2
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|+++|++. .||..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..|..|.++++ |
T Consensus 6 ~ls~n~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~----------L 71 (520)
T 2z7x_B 6 DRSKNGLI-HVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQE----------L 71 (520)
T ss_dssp ECTTSCCS-SCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTT----------C
T ss_pred ecCCCCcc-ccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccC----------C
Confidence 78899998 7998876 89999999999999888888999999999999999999888889988876 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccc-cCCccccCCCCccEEEcccccccccCCccccCCCcC--cEEE
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFR-SIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNL--VTLA 158 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~ 158 (741)
++|+|++|+|+++.+. .+. +|++|+|++|++.+ ..|..|+++++|++|+|++|+|++ ..|..+++| ++|+
T Consensus 72 ~~L~Ls~N~l~~lp~~---~l~-~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~ 144 (520)
T 2z7x_B 72 EYLDLSHNKLVKISCH---PTV-NLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVL 144 (520)
T ss_dssp CEEECCSSCCCEEECC---CCC-CCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEE
T ss_pred CEEecCCCceeecCcc---ccC-CccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEE
Confidence 9999999998854443 566 89999999998877 367888888999999999888875 345666666 7777
Q ss_pred cccCCC--CCcCcccccCCc------------------------------------------------------------
Q 037916 159 INTNKL--SGNIPPSIGNLK------------------------------------------------------------ 176 (741)
Q Consensus 159 L~~N~l--~~~~~~~~~~l~------------------------------------------------------------ 176 (741)
|++|++ .+..|..|..+.
T Consensus 145 l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~ 224 (520)
T 2z7x_B 145 LVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSN 224 (520)
T ss_dssp EEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCE
T ss_pred eecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhh
Confidence 777777 555555554422
Q ss_pred -----------------------ccceeeccCcccccccCccc-------------------------------------
Q 037916 177 -----------------------KLLQLYLIENFLQVSIPSSL------------------------------------- 196 (741)
Q Consensus 177 -----------------------~L~~L~L~~N~i~~~~~~~~------------------------------------- 196 (741)
+|++|++++|++++.+|..+
T Consensus 225 L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L 304 (520)
T 2z7x_B 225 LTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNI 304 (520)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCC
T ss_pred ccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCce
Confidence 45556666666655555444
Q ss_pred ----------------ccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCC--CCChhhcCCCCCcEEEecc
Q 037916 197 ----------------GQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVG--SLPTEVGKLINLEILFISR 258 (741)
Q Consensus 197 ----------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~ 258 (741)
..+++|++|++++|++++.+|..+.++++|+. |+|++|++++ .+|..++.+++|++|+|++
T Consensus 305 ~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~-L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 305 KNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELET-LILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp SEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCE-EECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred eEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCE-EEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 45667777777777777667777777777776 7777777775 3445677777777777777
Q ss_pred ccccc-hhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccccc
Q 037916 259 NMLEC-EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVI 337 (741)
Q Consensus 259 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 337 (741)
|.+++ +....|..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++++
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVP 460 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCC
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccC
Confidence 77776 4445577777777777777777766655543 67888888888887 56666668888888888888888766
Q ss_pred CC-ccccCCcccccccCCCCcccc
Q 037916 338 PT-EGVFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 338 ~~-~~~~~~~~~~~~~~n~~~c~~ 360 (741)
+. ...++.++.+++.+|++.|.+
T Consensus 461 ~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 461 DGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HHHhccCCcccEEECcCCCCcccC
Confidence 55 445677888888888887753
No 33
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5e-41 Score=386.74 Aligned_cols=345 Identities=18% Similarity=0.213 Sum_probs=301.1
Q ss_pred CCCCCccccc-----------------CChhhh-hCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCc-Ccc-cC
Q 037916 2 DVGVNRVQGG-----------------IPLDFG-FTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNN-LTG-EV 61 (741)
Q Consensus 2 dl~~n~~~~~-----------------ip~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~ 61 (741)
||++|++.+. +|..++ .++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+
T Consensus 212 ~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~l 291 (636)
T 4eco_A 212 YMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQL 291 (636)
T ss_dssp EEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHH
T ss_pred ECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccc
Confidence 6788999975 998876 269999999999999999999999999999999999999 998 88
Q ss_pred CchhhhhhhhhhccccCCCccEEECcCCcCcccCCc--hhhcccccccEEEccCCcccccCCccccCCCCccEEEccccc
Q 037916 62 PSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPG--CICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQ 139 (741)
Q Consensus 62 ~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~--~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 139 (741)
|..++.+... .+..+|++|+|++|+++ .+|. .+..++ +|++|++++|++.+.+| .|..+++|++|+|++|+
T Consensus 292 p~~~~~L~~~----~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~-~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 292 KDDWQALADA----PVGEKIQIIYIGYNNLK-TFPVETSLQKMK-KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQ 364 (636)
T ss_dssp HHHHHHHHHS----GGGGTCCEEECCSSCCS-SCCCHHHHTTCT-TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSE
T ss_pred hHHHHhhhcc----ccCCCCCEEECCCCcCC-ccCchhhhccCC-CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCc
Confidence 9999887210 00123999999999999 7777 899998 99999999999987888 99999999999999999
Q ss_pred ccccCCccccCCCc-CcEEEcccCCCCCcCcccccCCc--ccceeeccCcccccccCcccc-------cCCCCCEEeccC
Q 037916 140 LSGTISPAIGELQN-LVTLAINTNKLSGNIPPSIGNLK--KLLQLYLIENFLQVSIPSSLG-------QCQSLTTINLSY 209 (741)
Q Consensus 140 i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~i~~~~~~~~~-------~l~~L~~L~L~~ 209 (741)
++ .+|..|.++++ |++|+|++|+++ .+|..+..+. +|++|+|++|.+++..|..|. .+++|++|+|++
T Consensus 365 l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~ 442 (636)
T 4eco_A 365 IT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSN 442 (636)
T ss_dssp EE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCS
T ss_pred cc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcC
Confidence 99 66778999999 999999999999 7788887755 999999999999999999998 888999999999
Q ss_pred ccccccCCcc-ccccccceeEEEcCCCccCCCCChhhcCCC-------CCcEEEeccccccchhhhhcc--ccccccEEE
Q 037916 210 NNLSGTIPPQ-LMDLTSLSVGLDLSRNQLVGSLPTEVGKLI-------NLEILFISRNMLECEILSTLG--SCIKLEQLK 279 (741)
Q Consensus 210 N~l~~~~p~~-~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~ 279 (741)
|+++ .+|.. +..+++|+. |+|++|+|+...+..+..+. +|+.|+|++|+|+. .|..+. .+++|+.|+
T Consensus 443 N~l~-~lp~~~~~~l~~L~~-L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 443 NQIS-KFPKELFSTGSPLSS-INLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGID 519 (636)
T ss_dssp SCCC-SCCTHHHHTTCCCSE-EECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTCCEEE
T ss_pred CccC-cCCHHHHccCCCCCE-EECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCcCEEE
Confidence 9999 55655 556899998 99999999955544555443 99999999999995 455555 999999999
Q ss_pred eCCCccCCCCChhcccCccCCeeeC------CCCcCCCccchhhhccccCCcccccCcccccccCCccccCCcccccccC
Q 037916 280 LGGNLFQGPIPLSLSSLRGLRVLDL------SQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFG 353 (741)
Q Consensus 280 L~~N~l~~~~~~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 353 (741)
|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|++|+++.++.. .++.++.+++.+
T Consensus 520 Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~--~~~~L~~L~Ls~ 596 (636)
T 4eco_A 520 LSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEK--ITPNISVLDIKD 596 (636)
T ss_dssp CCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSC--CCTTCCEEECCS
T ss_pred CCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCccCHh--HhCcCCEEECcC
Confidence 99999997 8889999999999999 56888899999999999999999999999655443 348899999999
Q ss_pred CCCccccC
Q 037916 354 NSKLCGGI 361 (741)
Q Consensus 354 n~~~c~~~ 361 (741)
|++.|-.+
T Consensus 597 N~l~~~~~ 604 (636)
T 4eco_A 597 NPNISIDL 604 (636)
T ss_dssp CTTCEEEC
T ss_pred CCCccccH
Confidence 99988554
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.8e-41 Score=381.87 Aligned_cols=334 Identities=22% Similarity=0.221 Sum_probs=277.7
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|+++|++. .||..++ ++|++|+|++|+|+++.+.+|.++++|++|+|++|+|++..|+.|.++++ |
T Consensus 37 ~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~----------L 102 (562)
T 3a79_B 37 DYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQD----------L 102 (562)
T ss_dssp ECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTT----------C
T ss_pred EcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCC----------C
Confidence 78999999 6998876 89999999999999888899999999999999999999888999999886 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCccccCCCCccEEEcccccccccCCccccCCCcC--cEEE
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNL--VTLA 158 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~ 158 (741)
++|+|++|+|+.+.+. .+. +|++|+|++|++.+. .|..|.++++|++|+|++|+|++. .|.++++| ++|+
T Consensus 103 ~~L~Ls~N~l~~lp~~---~l~-~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~ 175 (562)
T 3a79_B 103 EYLDVSHNRLQNISCC---PMA-SLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCIL 175 (562)
T ss_dssp CEEECTTSCCCEECSC---CCT-TCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEE
T ss_pred CEEECCCCcCCccCcc---ccc-cCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEE
Confidence 9999999999955444 666 899999999999774 468999999999999999999864 34555555 9999
Q ss_pred cccCCC--CCcCcccccCCc------------------------------------------------------------
Q 037916 159 INTNKL--SGNIPPSIGNLK------------------------------------------------------------ 176 (741)
Q Consensus 159 L~~N~l--~~~~~~~~~~l~------------------------------------------------------------ 176 (741)
|++|++ ++..|..|..+.
T Consensus 176 L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 176 LDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT 255 (562)
T ss_dssp EEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEE
T ss_pred eecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEE
Confidence 999998 777777666543
Q ss_pred ---------------------ccceeeccCcccccccCccc---------------------------------------
Q 037916 177 ---------------------KLLQLYLIENFLQVSIPSSL--------------------------------------- 196 (741)
Q Consensus 177 ---------------------~L~~L~L~~N~i~~~~~~~~--------------------------------------- 196 (741)
+|++|++++|.+++.+|..+
T Consensus 256 L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSE
T ss_pred ecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceE
Confidence 67777777787776666554
Q ss_pred --------------ccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC--ChhhcCCCCCcEEEecccc
Q 037916 197 --------------GQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL--PTEVGKLINLEILFISRNM 260 (741)
Q Consensus 197 --------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~ 260 (741)
..+++|++|++++|++++..|..+.++++|+. |+|++|++++.. |..|..+++|++|+|++|+
T Consensus 336 L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 336 LSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQT-LILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp EEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCE-EECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred EEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCE-EECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 56788899999999998888888889999987 999999988643 4568888999999999999
Q ss_pred ccc-hhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 261 LEC-EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 261 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
+++ +....|..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++++++.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHH
Confidence 987 6666788889999999999998876665543 68999999999998 4555555899999999999999977766
Q ss_pred -ccccCCcccccccCCCCcccc
Q 037916 340 -EGVFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 340 -~~~~~~~~~~~~~~n~~~c~~ 360 (741)
...++.++.+++.+|++.|.+
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp STTTCTTCCCEECCSCCBCCCH
T ss_pred HHhcCCCCCEEEecCCCcCCCc
Confidence 456778889999999998853
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=365.25 Aligned_cols=252 Identities=22% Similarity=0.249 Sum_probs=192.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
...|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ......
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~~~ 83 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETANKI 83 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCEE
Confidence 456889999999999999999999999999999997433 23456788999999999999999999994 556689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++|+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 84 ~lv~E~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~ 150 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQ----------DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLI 150 (347)
T ss_dssp EEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEeCCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEE
Confidence 9999999999999998633 4588999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||++......... ......||+.|+|||.+.....++.++||||+||++|+|++|..||.... .......
T Consensus 151 DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~--- 221 (347)
T 3zgw_A 151 DFGLCAKPKGNKDY-HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKK--- 221 (347)
T ss_dssp CCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH---
T ss_pred eccCcccccCCCCc-cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH---
Confidence 99998765433221 12235699999999655444445899999999999999999999986321 1111110
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
+.. +... .+....+.+.+++.+||+.||++|||+.|+++-
T Consensus 222 -----i~~----~~~~----------------~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 222 -----IMR----GKYD----------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----HHH----TCCC----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----HHc----CCCC----------------CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 000 0000 001123457789999999999999999999864
No 36
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.7e-42 Score=361.55 Aligned_cols=265 Identities=26% Similarity=0.359 Sum_probs=196.4
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.+..|++.+.||+|+||.||+|++ +++.||+|++..... ...+.+.+|+.++++++||||+++++++ ....
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQPP 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSTT
T ss_pred ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 346788899999999999999988 488899999874332 2235678999999999999999999995 4555
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeCCCCc
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~~~~~ 553 (741)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~ 177 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKS-------GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYT 177 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHST-------THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCC
T ss_pred ceEEEEecCCCCcHHHHHhhc-------CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCc
Confidence 789999999999999998743 1123488999999999999999999999 8 999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+||+|||+++....... ......||+.|+|| |+..+..++.++||||+||++|+|++|+.||....... ......
T Consensus 178 ~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~ 252 (309)
T 3p86_A 178 VKVCDFGLSRLKASTFL--SSKSAAGTPEWMAP-EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVG 252 (309)
T ss_dssp EEECCCC-------------------CCTTSCH-HHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHH
T ss_pred EEECCCCCCcccccccc--ccccCCCCccccCh-hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence 99999999976543321 12235689999999 55567778999999999999999999999986321110 000000
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCC
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
.. ..... .+..+++.+.+++.+||+.||++|||+.|+++.|+.+.+...++
T Consensus 253 ~~-----------~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 253 FK-----------CKRLE------------------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp HS-----------CCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred hc-----------CCCCC------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 00 00000 01123456889999999999999999999999999998765433
No 37
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-41 Score=359.73 Aligned_cols=284 Identities=23% Similarity=0.328 Sum_probs=207.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|++.+.||+|+||.||+|++. ++.||+|+++... .......+|+.++++++||||+++++++.... ......++|
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~lv 100 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLWLI 100 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEEEE
Confidence 4778899999999999999986 7899999996432 22344566888899999999999999975322 123457999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhc-------CCCCceecCCCCCCeEeCCCCc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHD-------CQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-------~~~~ivHrDlkp~NIll~~~~~ 553 (741)
|||+++|+|.++++. ..+++..++.++.|++.||+|||+. +.++|+||||||+||+++.++.
T Consensus 101 ~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA-----------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred EecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe
Confidence 999999999999963 3488999999999999999999975 2348999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCC----CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLG----SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~----~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~ 629 (741)
+||+|||.++...............||+.|+|||.+... ..++.++|||||||++|||++|+.||.........
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-- 247 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML-- 247 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC--
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc--
Confidence 999999999877654443333445699999999655432 35667889999999999999999999743322111
Q ss_pred hhhhhc-CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 630 NFARTV-LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 630 ~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
.+.... ......++.+......... . .........+++.+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 248 PFEEEIGQHPSLEDMQEVVVHKKKRP-V--------LRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCC-C--------CCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhhhhccCCchhhhhhhhhcccCCC-C--------ccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111110 0111111111111000000 0 00000112456679999999999999999999999999999986
Q ss_pred hh
Q 037916 709 IL 710 (741)
Q Consensus 709 ~~ 710 (741)
..
T Consensus 319 ~~ 320 (322)
T 3soc_A 319 LT 320 (322)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 38
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1e-41 Score=366.35 Aligned_cols=271 Identities=20% Similarity=0.316 Sum_probs=208.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-------CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-------EGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVD 470 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 470 (741)
..|++.+.||+|+||.||+|++. .++..||+|+++.... ...+.+.+|+.+++++ +||||++++++|
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~---- 156 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC---- 156 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE----
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE----
Confidence 46788899999999999999974 3567899999974322 2345688999999999 899999999995
Q ss_pred ccCCceEEEEEecccCCChhhhccCCCCCCc------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADK------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 471 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
......|+||||+++|+|.+++...+.... .......+++.+++.++.||+.||+|||++ +|+||||||+
T Consensus 157 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~ 232 (370)
T 2psq_A 157 -TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232 (370)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred -ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchh
Confidence 445578999999999999999975422100 001224578999999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCcccc
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFE 623 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~ 623 (741)
||+++.++.+||+|||+++...............+|+.|+||| +..+..++.++|||||||++|||++ |..||.....
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHH-HHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHh-HhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999999998766544333333355788999995 4456789999999999999999999 9999863211
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 703 (741)
..... .+....... .+..++..+.+++.+||+.||++|||+.|+++.|
T Consensus 312 -----~~~~~---------~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 312 -----EELFK---------LLKEGHRMD------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp -----GGHHH---------HHHTTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -----HHHHH---------HHhcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11111 010000000 0113456788999999999999999999999999
Q ss_pred HHHHHhhc
Q 037916 704 QSIKSILL 711 (741)
Q Consensus 704 ~~i~~~~~ 711 (741)
+.+.....
T Consensus 360 ~~il~~~~ 367 (370)
T 2psq_A 360 DRILTLTT 367 (370)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99987654
No 39
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-40 Score=386.64 Aligned_cols=357 Identities=21% Similarity=0.226 Sum_probs=300.7
Q ss_pred CCCCCcccccCChhhhhCCC--CCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhcc----
Q 037916 2 DVGVNRVQGGIPLDFGFTLP--NLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQ---- 75 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~--~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~---- 75 (741)
+|++|++.+..|..+. .++ +|++|+|++|+++++.+..|.++++|++|+|++|++++..|..|..++++..+.
T Consensus 228 ~L~~n~l~~~~~~~~~-~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~ 306 (680)
T 1ziw_A 228 SLSNSQLSTTSNTTFL-GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306 (680)
T ss_dssp ECTTSCCCEECTTTTG-GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTC
T ss_pred EccCCcccccChhHhh-ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccch
Confidence 5778888877777776 564 499999999999988888999999999999999999988888887776532111
Q ss_pred -------------------ccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCccc--ccCCccccCC--CCccE
Q 037916 76 -------------------NCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIF--RSIPAGIGKF--INLQT 132 (741)
Q Consensus 76 -------------------~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~--~~~~~~~~~l--~~L~~ 132 (741)
...++|++|++++|++++..+..|..++ +|++|++++|.+. ......|..+ ++|++
T Consensus 307 ~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~ 385 (680)
T 1ziw_A 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHI 385 (680)
T ss_dssp BCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCE
T ss_pred hhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCce
Confidence 1124577888888888877777777777 7888888877642 2233334333 47888
Q ss_pred EEcccccccccCCccccCCCcCcEEEcccCCCCCcCc-ccccCCcccceeeccCcccccccCcccccCCCCCEEeccCcc
Q 037916 133 LHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIP-PSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNN 211 (741)
Q Consensus 133 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 211 (741)
|+|++|+++++.+..|..+++|++|+|++|++++.+| ..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.
T Consensus 386 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~ 465 (680)
T 1ziw_A 386 LNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465 (680)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccc
Confidence 8888888988888999999999999999999986555 688999999999999999998889999999999999999999
Q ss_pred cc--ccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhh--------hccccccccEEEeC
Q 037916 212 LS--GTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILS--------TLGSCIKLEQLKLG 281 (741)
Q Consensus 212 l~--~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~L~ 281 (741)
++ +.+|..|.++++|+. |+|++|+|++..+..|..+++|++|+|++|+++++... .|.++++|+.|+|+
T Consensus 466 l~~~~~~p~~~~~l~~L~~-L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 544 (680)
T 1ziw_A 466 LKNVDSSPSPFQPLRNLTI-LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLE 544 (680)
T ss_dssp CBCTTCSSCTTTTCTTCCE-EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECC
T ss_pred ccccccCCcccccCCCCCE-EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECC
Confidence 87 578999999999998 99999999988888899999999999999999976433 37899999999999
Q ss_pred CCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCcc--ccCCcccccccCCCCccc
Q 037916 282 GNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEG--VFKNASAISVFGNSKLCG 359 (741)
Q Consensus 282 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~ 359 (741)
+|+++.+.+..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|++|.+++.++... .++.+..+++.+|||.|+
T Consensus 545 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 545 SNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999997777789999999999999999998888889999999999999999999877642 578899999999999997
Q ss_pred cC
Q 037916 360 GI 361 (741)
Q Consensus 360 ~~ 361 (741)
+.
T Consensus 625 c~ 626 (680)
T 1ziw_A 625 CE 626 (680)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 40
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.8e-42 Score=361.04 Aligned_cols=278 Identities=23% Similarity=0.331 Sum_probs=205.7
Q ss_pred HHHHHhhhcccCceeeEEEEE----EcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGI----LDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++++.||+|+||.||+|+ +..+++.||+|+++.......+.+.+|+.++++++||||+++++++.. .+..
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~ 86 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 86 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH---HHHT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCC
Confidence 468889999999999999999 456899999999975554455678899999999999999999998642 2334
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~k 154 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH---------KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVK 154 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEE
T ss_pred ceEEEEEeCCCCCHHHHHHhc---------ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEE
Confidence 689999999999999998643 24588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+......... .......++..|+||| ...+..++.++||||+||++|||++|..||...... .......
T Consensus 155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~ 230 (295)
T 3ugc_A 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 230 (295)
T ss_dssp ECCCCSCC-------------CTTCGGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCT
T ss_pred EccCcccccccCCcceeeeccCCCCccceeCcH-HhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcC
Confidence 9999999876543221 1222344788899995 445667899999999999999999999998632111 0001000
Q ss_pred cCCcc--hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 635 VLPDH--VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 635 ~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
..... .....+.... ......+..+++.+.+++.+||+.||++|||+.|+++.|+++++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 231 DKQGQMIVFHLIELLKN---------------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp TCCTHHHHHHHHHHHHT---------------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ccccchhHHHHHHHHhc---------------cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 00000 0000000000 00011122456778999999999999999999999999999987653
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.8e-41 Score=359.60 Aligned_cols=251 Identities=19% Similarity=0.212 Sum_probs=199.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------cchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ .+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~ 86 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-----EN 86 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----EC
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----Ee
Confidence 4588899999999999999999999999999999753322 235688999999999999999999994 55
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC-
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM- 552 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~- 552 (741)
....|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~ 153 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQK----------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNI 153 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTC----------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTS
T ss_pred CCEEEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCC
Confidence 66899999999999999998643 4588999999999999999999999 999999999999998876
Q ss_pred ---ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchh
Q 037916 553 ---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629 (741)
Q Consensus 553 ---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~ 629 (741)
.+||+|||++......... ....||+.|+||| +..+..++.++||||+||++|+|++|..||..... .
T Consensus 154 ~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE-~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----~ 224 (361)
T 2yab_A 154 PIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----Q 224 (361)
T ss_dssp SSCCEEECCCSSCEECCTTCCC---CCCCSCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----H
T ss_pred CccCEEEEecCCceEcCCCCcc---ccCCCCccEECch-HHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 7999999999876554322 2356999999995 55667889999999999999999999999863211 0
Q ss_pred hhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 630 NFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 630 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
..... +..... ... ........+.+.+++.+||..||++|||+.|+++
T Consensus 225 ~~~~~--------i~~~~~--~~~--------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 ETLAN--------ITAVSY--DFD--------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHH--------HHTTCC--CCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHH--------HHhcCC--CCC--------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01100 000000 000 0001123456789999999999999999999884
No 42
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.2e-41 Score=358.04 Aligned_cols=278 Identities=33% Similarity=0.514 Sum_probs=216.2
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+....|.+.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.+++.++||||+++++++ ....
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~ 100 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC-----MTPT 100 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE-----CCSS
T ss_pred HHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE-----ecCC
Confidence 34567999999999999999999865 688999999974332 2344788999999999999999999995 4455
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 101 ERLLVYPYMANGSVASCLRERPE------SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp CCEEEEECCTTCBHHHHHHCCST------TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred ceEEEEEeccCCCHHHHHHhccc------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 78999999999999999975422 224589999999999999999999998777999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccc---cCCcchhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMF---EGNMNLHNFA 632 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~---~~~~~~~~~~ 632 (741)
|+|||.+.......... .....||+.|+||| +..+..++.++||||+||++|+|++|+.||+... ........+.
T Consensus 175 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp ECCCSSCEECCSSSSCE-ECCCCSCGGGCCHH-HHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred eccCccccccCcccccc-cccccCCcCccCHH-HhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 99999998765433222 22345999999995 4456678999999999999999999999996432 2222333343
Q ss_pred hhcCCcc-hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHH
Q 037916 633 RTVLPDH-VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSI 706 (741)
Q Consensus 633 ~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 706 (741)
....... .....+....... ..++...+.+++.+||+.||++|||+.||++.|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQGNY------------------KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTTSSCCSTTSSCTTCTTSC------------------CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHhhchhhhhhcChhhcccc------------------CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 3333322 2223332222222 235678899999999999999999999999999863
No 43
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-40 Score=380.02 Aligned_cols=340 Identities=20% Similarity=0.186 Sum_probs=213.7
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|+|.+..|..|. .+++|++|+|++|+|+++.|.+|.++++|++|+|++|++++..|..|.++++ |
T Consensus 39 ~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~----------L 107 (606)
T 3t6q_A 39 EFSFNVLPTIQNTTFS-RLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKA----------L 107 (606)
T ss_dssp ECTTCCCSEECTTTST-TCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTT----------C
T ss_pred EccCCccCcCChhHhc-cCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccccc----------c
Confidence 5666666644454554 6666666666666666666666666666666666666666666666666654 6
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCc--EEEc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLV--TLAI 159 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~--~L~L 159 (741)
++|+|++|++++..+..+..+. +|++|++++|++.+.....+..+++|++|+|++|+|+++.+..|..+++|+ .|++
T Consensus 108 ~~L~L~~n~i~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l 186 (606)
T 3t6q_A 108 KHLFFIQTGISSIDFIPLHNQK-TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNL 186 (606)
T ss_dssp CEEECTTSCCSCGGGSCCTTCT-TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEEC
T ss_pred cEeeccccCcccCCcchhccCC-cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEec
Confidence 6666666666665555566665 666666666666554444444466666666666666666666666666666 6666
Q ss_pred ccCCCCCcCcccccCC---------------------------------------------------cccceeeccCccc
Q 037916 160 NTNKLSGNIPPSIGNL---------------------------------------------------KKLLQLYLIENFL 188 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l---------------------------------------------------~~L~~L~L~~N~i 188 (741)
++|+++++.|..|... .+|+.|++++|.+
T Consensus 187 ~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l 266 (606)
T 3t6q_A 187 NGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCC
T ss_pred CCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCcc
Confidence 6666665555444321 0455566666666
Q ss_pred ccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccc-hhhh
Q 037916 189 QVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLEC-EILS 267 (741)
Q Consensus 189 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~ 267 (741)
++..+..|..+++|++|++++|+++ .+|..+.++++|+. |++++|.+.+..|..+..+++|++|++++|.+.+ +.+.
T Consensus 267 ~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (606)
T 3t6q_A 267 FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKK-LVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344 (606)
T ss_dssp SSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCE-EECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS
T ss_pred CccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCE-EECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh
Confidence 6555556666666666666666666 56666666666665 6666666665556666666666666666666653 3334
Q ss_pred hccccccccEEEeCCCccCCCC--ChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC--cccc
Q 037916 268 TLGSCIKLEQLKLGGNLFQGPI--PLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT--EGVF 343 (741)
Q Consensus 268 ~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~ 343 (741)
.|..+++|++|++++|++++.. +..+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++..+. ...+
T Consensus 345 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 424 (606)
T 3t6q_A 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTC
T ss_pred hhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCc
Confidence 4666666666666666666544 55666666666666666666666666666666666666666666655443 2345
Q ss_pred CCcccccccCCC
Q 037916 344 KNASAISVFGNS 355 (741)
Q Consensus 344 ~~~~~~~~~~n~ 355 (741)
+.++.+++.+|.
T Consensus 425 ~~L~~L~l~~n~ 436 (606)
T 3t6q_A 425 HLLKVLNLSHSL 436 (606)
T ss_dssp TTCCEEECTTCC
T ss_pred ccCCEEECCCCc
Confidence 566666666664
No 44
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=379.47 Aligned_cols=346 Identities=24% Similarity=0.240 Sum_probs=264.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.+.+|.++++|++|+|++|++++..|..|.++++ |
T Consensus 34 ~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~----------L 102 (570)
T 2z63_A 34 DLSFNPLRHLGSYSFF-SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSS----------L 102 (570)
T ss_dssp ECCSCCCCEECTTTTT-TCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTT----------C
T ss_pred EccCCccCccChhHhh-CCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccc----------c
Confidence 6888998855555555 8999999999999999888888999999999999999999888888888876 7
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCccccCCCCccEEEcccccccccCCccccCCCcC----cE
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNL----VT 156 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L----~~ 156 (741)
++|++++|++++..+..+..+. +|++|++++|.+.+. .|..|.++++|++|++++|+++++.+..|..+++| +.
T Consensus 103 ~~L~L~~n~l~~l~~~~~~~l~-~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~ 181 (570)
T 2z63_A 103 QKLVAVETNLASLENFPIGHLK-TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (570)
T ss_dssp CEEECTTSCCCCSTTCSCTTCT-TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCE
T ss_pred ccccccccccccCCCccccccc-cccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhh
Confidence 7777777777766655677776 777777777777653 57777777777777777777766555544444444 34
Q ss_pred EEcccCCCCCcC--------------------------------------------------------------------
Q 037916 157 LAINTNKLSGNI-------------------------------------------------------------------- 168 (741)
Q Consensus 157 L~L~~N~l~~~~-------------------------------------------------------------------- 168 (741)
|++++|.++++.
T Consensus 182 L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~ 261 (570)
T 2z63_A 182 LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 261 (570)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEE
T ss_pred cccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhh
Confidence 444444333222
Q ss_pred ------------------------------------cccc----------------------------------------
Q 037916 169 ------------------------------------PPSI---------------------------------------- 172 (741)
Q Consensus 169 ------------------------------------~~~~---------------------------------------- 172 (741)
|..+
T Consensus 262 l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 262 FRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccc
Confidence 2111
Q ss_pred --cCCcccceeeccCccccccc--CcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCC-hhhcC
Q 037916 173 --GNLKKLLQLYLIENFLQVSI--PSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLP-TEVGK 247 (741)
Q Consensus 173 --~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p-~~~~~ 247 (741)
..+++|++|++++|.+++.. |..+..+++|++|++++|++++. |..+..+++|+. |++++|.+.+..| ..|..
T Consensus 342 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~~ 419 (570)
T 2z63_A 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEH-LDFQHSNLKQMSEFSVFLS 419 (570)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCE-EECTTSEEESCTTSCTTTT
T ss_pred ccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCE-EEccCCccccccchhhhhc
Confidence 23344555555555555332 45566677777777777777743 334788888887 8999988887665 57888
Q ss_pred CCCCcEEEeccccccchhhhhccccccccEEEeCCCccC-CCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcc
Q 037916 248 LINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQ-GPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNL 326 (741)
Q Consensus 248 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 326 (741)
+++|++|++++|.+.+..+..|.++++|++|++++|+++ +.+|..|..+++|+.|+|++|++++..|..|..+++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 999999999999999888889999999999999999987 5688889999999999999999998889999999999999
Q ss_pred cccCcccccccCCc-cccCCcccccccCCCCccccC
Q 037916 327 NLSYNDLEGVIPTE-GVFKNASAISVFGNSKLCGGI 361 (741)
Q Consensus 327 ~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 361 (741)
++++|++++.++.. ..++.++.+++.+|++.|..+
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99999999887754 557788999999999988654
No 45
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-41 Score=354.05 Aligned_cols=268 Identities=21% Similarity=0.302 Sum_probs=205.0
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
.++..+|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++ .
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~ 81 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----E 81 (294)
T ss_dssp SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----E
T ss_pred hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----e
Confidence 34456799999999999999999999999999999998643322 235678999999999999999999994 5
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
.....|+||||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++
T Consensus 82 ~~~~~~lv~e~~~g~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~ 148 (294)
T 4eqm_A 82 EDDCYYLVMEYIEGPTLSEYIESH----------GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNK 148 (294)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTS
T ss_pred eCCeEEEEEeCCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 566899999999999999998633 4588999999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||.+.......... .....||+.|+||| ...+..++.++||||+||++|+|++|+.||.......... ...
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~ 225 (294)
T 4eqm_A 149 TLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHI 225 (294)
T ss_dssp CEEECCCSSSTTC--------------CCSSCCHH-HHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHH
T ss_pred CEEEEeCCCccccccccccc-cCccccCccccCHh-HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHh
Confidence 99999999998765432221 22356899999995 4556778999999999999999999999986321110000 000
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-CHHHHHHHHHHHHHhhc
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-NMTIVVHELQSIKSILL 711 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~ 711 (741)
....+.... ......++.+.+++.+||+.||++|| +++++.+.|+.+.....
T Consensus 226 ~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 226 QDSVPNVTT---------------------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp SSCCCCHHH---------------------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred hccCCCcch---------------------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 000000000 00113456788999999999999999 99999999988765443
No 46
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=398.78 Aligned_cols=88 Identities=25% Similarity=0.249 Sum_probs=49.9
Q ss_pred cccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCccccCCcccc
Q 037916 270 GSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAI 349 (741)
Q Consensus 270 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 349 (741)
.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+. ++|+.|+|++|++++.+|.. +..+..+
T Consensus 477 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l 552 (844)
T 3j0a_A 477 EGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVL 552 (844)
T ss_dssp SCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEE
T ss_pred cCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEE
Confidence 3344444444444444444444455555555555555555544444433 45555555555555555533 6678899
Q ss_pred cccCCCCccccC
Q 037916 350 SVFGNSKLCGGI 361 (741)
Q Consensus 350 ~~~~n~~~c~~~ 361 (741)
++.+|++.|.+.
T Consensus 553 ~l~~Np~~C~c~ 564 (844)
T 3j0a_A 553 DITHNKFICECE 564 (844)
T ss_dssp EEEEECCCCSSS
T ss_pred EecCCCcccccc
Confidence 999999999664
No 47
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-41 Score=355.27 Aligned_cols=264 Identities=26% Similarity=0.387 Sum_probs=198.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|.+.++||+|+||.||+|.+.. .+|+|+++.... ...+.+.+|+.++++++||||+++++++. ....
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~ 106 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDNL 106 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred cceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCcE
Confidence 357788999999999999998753 488998874332 23456789999999999999999999852 3357
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 107 ~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 174 (307)
T 3lb7_A 107 AIVTQWCEGSSLYKHLHVQ---------ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIG 174 (307)
T ss_dssp EEEEECCSSCBHHHHHHTS---------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEc
Confidence 8999999999999998633 24588999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCccccc--CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~--~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|||++................||+.|+|||.+. .+..++.++|||||||++|||++|+.||......+..........
T Consensus 175 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 254 (307)
T 3lb7_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 254 (307)
T ss_dssp CCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC
T ss_pred cCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC
Confidence 999998654322222223356999999996553 356788999999999999999999999863321111110000111
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
....... . ...+++.+.+++.+||+.||++|||+.||++.|+.+...++
T Consensus 255 ~~~~~~~--------~-------------------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 255 ASPDLSK--------L-------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCCCSTT--------S-------------------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCcchhh--------h-------------------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 1110000 0 01345678899999999999999999999999999987654
No 48
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-40 Score=379.94 Aligned_cols=356 Identities=20% Similarity=0.223 Sum_probs=242.7
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCc--EEEeecCcCcccCCchhhhhh----------
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLE--VFQVTSNNLTGEVPSEFGKAT---------- 69 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l~---------- 69 (741)
||++|++.+.-++.+. .+++|++|+|++|+|+++.+..|..+++|+ +|++++|++++..|..|....
T Consensus 135 ~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~ 213 (606)
T 3t6q_A 135 YLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQ 213 (606)
T ss_dssp ECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCS
T ss_pred ECCCCcccccCccccc-CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCch
Confidence 6788999863334444 489999999999999988888888999998 889999999887776654310
Q ss_pred ----------hh---------------------hhccccCCCccEEECcCCcCcccCCchhhccc---------------
Q 037916 70 ----------KA---------------------YCVQNCNQHLKHLDINNNNFGGLLPGCICNFS--------------- 103 (741)
Q Consensus 70 ----------~~---------------------~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~--------------- 103 (741)
.. .....+..+|+.|++++|+++++.+..|..++
T Consensus 214 ~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~l 293 (606)
T 3t6q_A 214 NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL 293 (606)
T ss_dssp CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCC
T ss_pred hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCC
Confidence 00 00000001344444444444444444444444
Q ss_pred -------ccccEEEccCCcccccCCccccCCCCccEEEccccccccc-CCccccCCCcCcEEEcccCCCCCcC--ccccc
Q 037916 104 -------ITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT-ISPAIGELQNLVTLAINTNKLSGNI--PPSIG 173 (741)
Q Consensus 104 -------~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~ 173 (741)
.+|++|++++|++.+..|..+..+++|++|+|++|.+.+. .+..|.++++|++|++++|++++.. +..|.
T Consensus 294 p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 294 PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 0455555555555444444455555555555555554422 2233555666666666666665444 55566
Q ss_pred CCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcc-ccccccceeEEEcCCCccCCCCChhhcCCCCCc
Q 037916 174 NLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQ-LMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLE 252 (741)
Q Consensus 174 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~ 252 (741)
++++|++|++++|.+.+..|..|..+++|++|++++|++++..|.. |.++++|+. |++++|.+.+..|..|..+++|+
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~ 452 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV-LNLSHSLLDISSEQLFDGLPALQ 452 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE-EECTTCCCBTTCTTTTTTCTTCC
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE-EECCCCccCCcCHHHHhCCCCCC
Confidence 6777777777777776666777777777777777777777555443 677777776 88888887777777788888888
Q ss_pred EEEeccccccch---hhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCccccc
Q 037916 253 ILFISRNMLECE---ILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLS 329 (741)
Q Consensus 253 ~L~Ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 329 (741)
+|+|++|++++. .+..+..+++|+.|++++|++++..|.+|.++++|+.|+|++|++++..|..|..++.| .|+++
T Consensus 453 ~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~ 531 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLA 531 (606)
T ss_dssp EEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECC
T ss_pred EEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECc
Confidence 888888887763 22567788888888888888888778888888888888888888888888888888888 88888
Q ss_pred CcccccccCCc-cccCCcccccccCCCCcccc
Q 037916 330 YNDLEGVIPTE-GVFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 330 ~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 360 (741)
+|++++.+|.. ..++.++.+++.+|++.|.+
T Consensus 532 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 532 SNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp SSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 88888777654 45677888889999888854
No 49
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.8e-42 Score=369.57 Aligned_cols=259 Identities=23% Similarity=0.325 Sum_probs=204.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||++++++| ......|+
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~~l 189 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYI 189 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSSSCEE
T ss_pred HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCCCcEE
Confidence 46778899999999999999998999999999874321 2235678899999999999999999995 34557899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 190 v~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~Df 257 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE---------GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDF 257 (377)
T ss_dssp EEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred EEEcCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcC
Confidence 99999999999998632 24588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|+++...............+++.|+||| ...+..++.++|||||||++|||++ |..||...... ...
T Consensus 258 G~s~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~--------- 325 (377)
T 3cbl_A 258 GMSREEADGVYAASGGLRQVPVKWTAPE-ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTR--------- 325 (377)
T ss_dssp GGCEECTTSEEECCSSCCEEEGGGSCHH-HHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHH---------
T ss_pred CCceecCCCceeecCCCCCCCcCcCCHh-HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---------
Confidence 9998655432222222233677899995 4456678999999999999999998 99998632111 111
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
+.+....... .+..+++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 326 ---~~~~~~~~~~------------------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 326 ---EFVEKGGRLP------------------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ---HHHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1111100000 0113456788999999999999999999999999998764
No 50
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=359.92 Aligned_cols=263 Identities=23% Similarity=0.325 Sum_probs=203.9
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCC---CeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEG---KTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..+|++.+.||+|+||.||+|.+..+ +..||+|+++... ....+.+.+|+.++++++||||+++++++ .++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 35688899999999999999999744 4469999997432 22345688999999999999999999995 445
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTH---------DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVC 190 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTT---------TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CccEEEeeCCCCCcHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCE
Confidence 6789999999999999998633 24588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhh
Q 037916 555 HVADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 632 (741)
||+|||++......... .......+|+.|+||| +..+..++.++||||+||++|||++ |..||...... . ..
T Consensus 191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~---~~ 264 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--D---VI 264 (325)
T ss_dssp EECCCSSCEECC----CCEECC---CCGGGSCHH-HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--H---HH
T ss_pred EECCCCcccccccCccceeeccCCCCcccccCHh-HhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--H---HH
Confidence 99999999877544221 1222234678899995 4556778999999999999999999 99998632111 0 00
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
. .+....... .+..++..+.+++.+||..||++|||+.||++.|+.+.+...
T Consensus 265 ~---------~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 265 S---------SVEEGYRLP------------------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp H---------HHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred H---------HHHcCCCCC------------------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0 000000000 011345678899999999999999999999999999987544
No 51
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=352.98 Aligned_cols=253 Identities=20% Similarity=0.210 Sum_probs=201.0
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------cchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------ASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
+...|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 83 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY----- 83 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----
Confidence 346789999999999999999999999999999999743322 245688999999999999999999994
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+
T Consensus 84 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~ 150 (326)
T 2y0a_A 84 ENKTDVILILELVAGGELFDFLAEK----------ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDR 150 (326)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTTS----------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCS
T ss_pred EeCCEEEEEEEcCCCCCHHHHHHhc----------CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecC
Confidence 4566899999999999999998643 4588999999999999999999999 99999999999999888
Q ss_pred C----ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 552 M----TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 552 ~----~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
+ .+||+|||++......... ....||+.|+||| +..+..++.++||||+||++|+|++|..||....... .
T Consensus 151 ~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~ 225 (326)
T 2y0a_A 151 NVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 225 (326)
T ss_dssp SSSSCCEEECCCTTCEECCTTSCC---CCCCSCTTTCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CCCCCCEEEEECCCCeECCCCCcc---ccccCCcCcCCce-eecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-H
Confidence 7 8999999999876543222 2356999999994 5567789999999999999999999999986321100 0
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+......... .. .......+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~--------------~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 LANVSAVNYE--------------FE--------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHTCCC--------------CC--------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCC--------------cC--------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000000 00 0001123456789999999999999999999986
No 52
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-41 Score=358.23 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=197.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
+.|.+.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ .....
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~~ 83 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPTD 83 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 5788999999999999999999989999999999732 223356788999999999999999999995 45568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+ +|+|.+++... ..+++.+++.++.|++.||.|||+. ||+||||||+||+++.++.+||
T Consensus 84 ~~lv~E~~-~g~l~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl 149 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVEK----------KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKI 149 (336)
T ss_dssp EEEEECCC-CEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEE
T ss_pred EEEEEECC-CCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEE
Confidence 99999999 78999888532 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||++......... ....||+.|+|||.+......+.++||||+||++|+|++|+.||....... ......
T Consensus 150 ~DFG~s~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----~~~~i~ 221 (336)
T 3h4j_B 150 ADFGLSNIMTDGNFL---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----LFKKVN 221 (336)
T ss_dssp CCSSCTBTTTTSBTT---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----CBCCCC
T ss_pred EEeccceeccCCccc---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----HHHHHH
Confidence 999999876554322 224699999999655433334789999999999999999999996321111 111000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
... .. . +...++.+.+++.+||+.||++|||+.|+++-
T Consensus 222 ~~~-~~--------~-------------------p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 SCV-YV--------M-------------------PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SSC-CC--------C-------------------CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cCC-CC--------C-------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000 00 0 00123557799999999999999999999864
No 53
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.6e-41 Score=352.18 Aligned_cols=268 Identities=22% Similarity=0.322 Sum_probs=200.0
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHh--cCCCceeeEeeeecCccccCCc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN--IRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+...|++.+.||+|+||.||+|++ +++.||+|+++. .....+..|.+++.. ++||||+++++++.... ....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCc
Confidence 345788999999999999999998 588999999863 234555667777666 79999999999864322 3345
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCeE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH--------HDCQPTTAHCDLKPSNVL 547 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDlkp~NIl 547 (741)
..++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil 145 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL-----------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNIL 145 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEE
T ss_pred eeEEehhhccCCCHHHHHhh-----------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEE
Confidence 68999999999999999952 35889999999999999999999 77 9999999999999
Q ss_pred eCCCCceEEeecccccccCCCCccc--ccccccccccccCcccccCCC-----CCCCccCchhHHHHHHHHHcC------
Q 037916 548 LDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGLGS-----EVSINGDVYSYGILLLELMTR------ 614 (741)
Q Consensus 548 l~~~~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~~~-----~~~~~~DIwSlG~il~elltg------ 614 (741)
++.++.+||+|||++.......... ......||+.|+|||.+.... .++.++|||||||++|||++|
T Consensus 146 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred EcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 9999999999999997655432211 122346999999996554332 455799999999999999999
Q ss_pred ----CCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCC
Q 037916 615 ----KRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESP 690 (741)
Q Consensus 615 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 690 (741)
..||..................... ...... .......++..+.+++.+||+.||
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-------------~~~~~~~~~~~l~~li~~cl~~dP 284 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQ--------QRPNIP-------------NRWFSDPTLTSLAKLMKECWYQNP 284 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSC--------CCCCCC-------------GGGGGSHHHHHHHHHHHHHCCSSG
T ss_pred cccccccccccCCCCcchhhhhHHHhccC--------CCCCCC-------------hhhccCccHHHHHHHHHHHhhcCh
Confidence 6666533332222222211111000 000000 000112456789999999999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 037916 691 QDRMNMTIVVHELQSI 706 (741)
Q Consensus 691 ~~RPs~~evl~~L~~i 706 (741)
++|||+.||++.|+++
T Consensus 285 ~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 285 SARLTALRIKKTLTKI 300 (301)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHhcc
Confidence 9999999999999876
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-41 Score=356.02 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=199.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ .....
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~~ 79 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDR 79 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSSE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCCE
Confidence 4688899999999999999999999999999999743 233456778999999999999999999994 55668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||
T Consensus 80 ~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 146 (337)
T 1o6l_A 80 LCFVMEYANGGELFFHLSRE----------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKI 146 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEE
Confidence 99999999999999988632 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++....... ......||+.|+||| +..+..++.++||||+||++|||++|+.||..... .....
T Consensus 147 ~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~--- 215 (337)
T 1o6l_A 147 TDFGLCKEGISDGA--TMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFE--- 215 (337)
T ss_dssp CCCTTCBCSCCTTC--CBCCCEECGGGCCGG-GGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred eeccchhhcccCCC--cccccccChhhCChh-hhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHH---
Confidence 99999986433221 122356999999994 55677889999999999999999999999863211 11110
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 702 (741)
.+...... . +....+.+.+++.+||+.||++|| ++.|+++-
T Consensus 216 -----~i~~~~~~--~------------------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 216 -----LILMEEIR--F------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -----HHHHCCCC--C------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----HHHcCCCC--C------------------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 00000000 0 012345678999999999999999 89998763
No 55
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.5e-41 Score=356.24 Aligned_cols=265 Identities=17% Similarity=0.183 Sum_probs=206.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+.+++++ +||||+++++++ ..+...+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~~ 81 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK--SRAPQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYNA 81 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT--CSSCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc--cchHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCccE
Confidence 4688999999999999999999889999999998743 2345788999999999 999999999994 4466889
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc-----
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT----- 553 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~----- 553 (741)
+||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 82 lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~ 148 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC---------DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQV 148 (330)
T ss_dssp EEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTS
T ss_pred EEEEeC-CCCHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCce
Confidence 999999 99999998643 24689999999999999999999999 9999999999999998887
Q ss_pred eEEeecccccccCCCCccc-----ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 554 AHVADFGLAKLLPPAHLQT-----SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~-----~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
+||+|||+++......... ......||+.|+|| |+..+..++.++|||||||++|||++|+.||...... ..
T Consensus 149 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~ 225 (330)
T 2izr_A 149 IHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI-NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL 225 (330)
T ss_dssp EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH-HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred EEEEEcccceeeecCCCCccccccccCCcCCCccccCh-HHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence 9999999998765432211 12345699999999 5556778899999999999999999999999733111 11
Q ss_pred hhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 629 HNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 629 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
...... +.+..... ........++ .+.+++..||+.||++||++.+|.+.|+++.+
T Consensus 226 ~~~~~~--------i~~~~~~~---------------~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 226 KERYQK--------IGDTKRAT---------------PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HHHHHH--------HHHHHHHS---------------CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHH--------HHhhhccC---------------CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 111110 00000000 0000001123 78899999999999999999999999999987
Q ss_pred hhc
Q 037916 709 ILL 711 (741)
Q Consensus 709 ~~~ 711 (741)
...
T Consensus 282 ~~~ 284 (330)
T 2izr_A 282 RKG 284 (330)
T ss_dssp HTT
T ss_pred HcC
Confidence 653
No 56
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1e-40 Score=344.11 Aligned_cols=258 Identities=19% Similarity=0.255 Sum_probs=204.3
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..+...|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ ..+
T Consensus 3 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (276)
T 2yex_A 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REG 77 (276)
T ss_dssp HHHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred CceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcC
Confidence 346789999999999999999999999899999999997433 23346788999999999999999999994 455
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 144 (276)
T 2yex_A 78 NIQYLFLEYCSGGELFDRIEPD----------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNL 144 (276)
T ss_dssp TEEEEEEECCTTEEGGGGSBTT----------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CEEEEEEEecCCCcHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCE
Confidence 6889999999999999998643 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+................||+.|+|||.+.....++.++||||+|+++|+|++|..||.........+..+...
T Consensus 145 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (276)
T 2yex_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224 (276)
T ss_dssp EECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT
T ss_pred EEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc
Confidence 99999999865433222222335689999999655444445789999999999999999999997433222222221111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~------------~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 225 KTYL------------N------------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CTTS------------T------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccc------------C------------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0000 0 00123456789999999999999999999876
No 57
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=368.58 Aligned_cols=268 Identities=23% Similarity=0.354 Sum_probs=204.4
Q ss_pred HHHHHhhhcccCceeeEEEEEE-----cCCCeEEEEEEeecc-CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGIL-----DEGKTIIAVKVLNLL-HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
..|++.+.||+|+||.||+|++ ..+++.||+|+++.. .......+.+|+.++++++||||+++++++ ..
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~ 145 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----LQ 145 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----ec
Confidence 4578889999999999999994 456789999998632 223345678899999999999999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC-
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM- 552 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~- 552 (741)
....++||||+++|+|.+++...+... .....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 219 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRP---SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCS---SSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhcccc---CccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCC
Confidence 557899999999999999997542211 1234588999999999999999999999 999999999999999555
Q ss_pred --ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchh
Q 037916 553 --TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLH 629 (741)
Q Consensus 553 --~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~ 629 (741)
.+||+|||+++...............||+.|+||| +..+..++.++|||||||++|||++ |..||..... ....
T Consensus 220 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~ 296 (367)
T 3l9p_A 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVL 296 (367)
T ss_dssp TCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH
T ss_pred CceEEECCCccccccccccccccCCCcCCcccEECHH-HhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH
Confidence 59999999997654332222233355899999995 4456678999999999999999998 9999863211 1111
Q ss_pred hhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 630 NFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 630 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
..+.. ...... ...++..+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 297 ~~i~~------------~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 297 EFVTS------------GGRMDP------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp HHHHT------------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHc------------CCCCCC------------------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11110 000000 113345688999999999999999999999999998875
Q ss_pred hc
Q 037916 710 LL 711 (741)
Q Consensus 710 ~~ 711 (741)
..
T Consensus 347 ~~ 348 (367)
T 3l9p_A 347 PD 348 (367)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 58
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.7e-41 Score=353.84 Aligned_cols=287 Identities=20% Similarity=0.258 Sum_probs=189.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
...|++++.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 457999999999999999999999899999999997543 23446788999999999999999999994 456689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||++ ++|.+++...... .....+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVG----NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSS----SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhcccc----ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEEC
Confidence 99999997 6999988643111 1124588899999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC-
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL- 636 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~- 636 (741)
|||.+......... .....||+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+........
T Consensus 151 Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~ 227 (317)
T 2pmi_A 151 DFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGT 227 (317)
T ss_dssp CCSSCEETTSCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCS
T ss_pred cCccceecCCCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 99999876533221 223468999999966655567899999999999999999999999633211 11111111000
Q ss_pred C-cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 P-DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+ ........................................+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0000000000000000000000000000000001123457889999999999999999999886
No 59
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.5e-40 Score=346.86 Aligned_cols=267 Identities=28% Similarity=0.414 Sum_probs=205.9
Q ss_pred HHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC----cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 403 LFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH----HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 403 ~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
...+.||+|+||.||+|.+ +++.||+|++.... ....+.+.+|+.++++++||||+++++++ ......+
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 106 (307)
T 2nru_A 34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS-----SDGDDLC 106 (307)
T ss_dssp TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSCE
T ss_pred ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----ecCCceE
Confidence 3457899999999999987 47889999986422 22345678999999999999999999995 4456789
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~D 176 (307)
T 2nru_A 107 LVYVYMPNGSLLDRLSCLD-------GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISD 176 (307)
T ss_dssp EEEECCTTCBHHHHHHTGG-------GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred EEEEecCCCcHHHHHHhcc-------CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 9999999999999986431 124588999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc--C
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV--L 636 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~ 636 (741)
||.+................||+.|+|||.+ . +.++.++||||+||++|+|++|..||....... ....+.... .
T Consensus 177 fg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~ 253 (307)
T 2nru_A 177 FGLARASEKFAQTVMTSRIVGTTAYMAPEAL-R-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDE 253 (307)
T ss_dssp CTTCEECCSCSSCEECSSCCSCGGGCCHHHH-T-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTT
T ss_pred cccccccccccccccccccCCCcCcCChHHh-c-CCCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhh
Confidence 9999876544332223335689999999654 3 358899999999999999999999987432221 111111111 1
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
.....++++..+... ...+++.+.+++.+||+.||++|||+.||++.|+++..
T Consensus 254 ~~~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 254 EKTIEDYIDKKMNDA-------------------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHSCSSCSCC-------------------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhcccccccc-------------------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 112233333322211 23567789999999999999999999999999998864
No 60
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-41 Score=354.20 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=200.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+.+++.++||||+++++++ .+....++
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~l 78 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF-----ESMEELVM 78 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEEE
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEEE
Confidence 4688899999999999999999999999999998743 23345678999999999999999999994 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC--CCceEEe
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH--EMTAHVA 557 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL~ 557 (741)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+||+++. ++.+||+
T Consensus 79 v~e~~~g~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~ 146 (321)
T 1tki_A 79 IFEFISGLDIFERINTS---------AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKII 146 (321)
T ss_dssp EECCCCCCBHHHHHTSS---------SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEEC
T ss_pred EEEeCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEE
Confidence 99999999999998643 23588999999999999999999999 9999999999999987 7899999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||.+......... ....||+.|+|| |+..+..++.++||||+||++|+|++|..||...... ....
T Consensus 147 Dfg~a~~~~~~~~~---~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~---- 213 (321)
T 1tki_A 147 EFGQARQLKPGDNF---RLLFTAPEYYAP-EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIE---- 213 (321)
T ss_dssp CCTTCEECCTTCEE---EEEESCGGGSCH-HHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH----
T ss_pred ECCCCeECCCCCcc---ccccCChhhcCc-HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHH----
Confidence 99999877544322 234689999999 5556677899999999999999999999998632110 0100
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+......... ......+..+.+++.+||..||++|||+.|+++.
T Consensus 214 ----~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 214 ----NIMNAEYTFDE----------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----HHHHTCCCCCH----------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----HHHcCCCCCCh----------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110000000 0011335668899999999999999999999873
No 61
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.7e-41 Score=362.46 Aligned_cols=272 Identities=20% Similarity=0.244 Sum_probs=207.1
Q ss_pred HHHHHhhhcccCceeeEEEEE-----EcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGI-----LDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~-----~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 472 (741)
.+|++.+.||+|+||.||+|+ ...+++.||+|+++.... ...+.+.+|+.+++++ +||||++++++|. .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~ 97 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----K 97 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----S
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee----c
Confidence 468888999999999999999 456779999999974322 2345688999999999 7899999999973 3
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcc--------------------------------------------------
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKT-------------------------------------------------- 502 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-------------------------------------------------- 502 (741)
.+...++||||+++|+|.+++.........
T Consensus 98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (359)
T 3vhe_A 98 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVE 177 (359)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------
T ss_pred CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhh
Confidence 344689999999999999999754321000
Q ss_pred ------cCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecccccccCCCCccccccc
Q 037916 503 ------VEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576 (741)
Q Consensus 503 ------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~ 576 (741)
......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..............
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 254 (359)
T 3vhe_A 178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 254 (359)
T ss_dssp ------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--
T ss_pred hcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccc
Confidence 00122388999999999999999999999 999999999999999999999999999987654433333344
Q ss_pred ccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchh
Q 037916 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDL 655 (741)
Q Consensus 577 ~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 655 (741)
..||+.|+||| +..+..++.++|||||||++|||++ |..||....... .+...... ......
T Consensus 255 ~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~------------~~~~~~--- 317 (359)
T 3vhe_A 255 ARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE------------GTRMRA--- 317 (359)
T ss_dssp CEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHH------------TCCCCC---
T ss_pred cCCCceeEChh-hhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHc------------CCCCCC---
Confidence 56899999995 4456778999999999999999998 999986322111 11111110 000000
Q ss_pred hhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 656 TITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
+..+++.+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 318 ---------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 ---------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0123456889999999999999999999999999998653
No 62
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.9e-41 Score=365.71 Aligned_cols=256 Identities=17% Similarity=0.187 Sum_probs=200.6
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+...|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||++++++ +.++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~-----~~~~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS-----ISEE 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEE-----EECS
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEE-----EEEC
Confidence 456789999999999999999999999999999999974332 234567899999999999999999999 4566
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC---CC
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD---HE 551 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~---~~ 551 (741)
...|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++ .+
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~----------~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~ 149 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR----------EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKG 149 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTT
T ss_pred CEEEEEEEeCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCC
Confidence 7899999999999999988643 4588999999999999999999999 999999999999998 46
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+.+||+|||++......... .....||+.|+|| |+..+..++.++||||+||++|+|++|..||..... ......
T Consensus 150 ~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~AP-E~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~ 224 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSP-EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQ 224 (444)
T ss_dssp CCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHH
T ss_pred CcEEEccCceeEEecCCCce--eecccCCcccCCH-HHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHH
Confidence 78999999999876544322 2235699999999 455667899999999999999999999999852211 111000
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
+.. ........ .....++.+.+++.+||+.||++|||+.|+++-
T Consensus 225 i~~-----------~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 225 IKA-----------GAYDFPSP----------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHH-----------TCCCCCTT----------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHh-----------CCCCCCcc----------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 00000000 001234567899999999999999999999863
No 63
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-40 Score=351.14 Aligned_cols=249 Identities=21% Similarity=0.242 Sum_probs=199.8
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|...++||+|+||.||+|++..+|+.||||+++.......+.+.+|+.++++++||||+++++++ ......++|
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 120 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY-----LVGEELWVL 120 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEEE
Confidence 366677899999999999999989999999999866555667788999999999999999999995 345589999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg 560 (741)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|||
T Consensus 121 ~e~~~~~~L~~~l~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 186 (321)
T 2c30_A 121 MEFLQGGALTDIVSQ-----------VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFG 186 (321)
T ss_dssp ECCCCSCBHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeee
Confidence 999999999999863 3478999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcch
Q 037916 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640 (741)
Q Consensus 561 ~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (741)
++......... .....||+.|+||| +..+..++.++||||+||++|+|++|+.||..... ..............
T Consensus 187 ~~~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~- 260 (321)
T 2c30_A 187 FCAQISKDVPK--RKSLVGTPYWMAPE-VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPK- 260 (321)
T ss_dssp TCEECCSSSCC--BCCCCSCGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCCC-
T ss_pred eeeecccCccc--cccccCCccccCHh-hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCCCCC-
Confidence 99876543222 22356999999995 55677889999999999999999999999863211 01100111000000
Q ss_pred hHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 641 MDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 641 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. .....++.+.+++.+||+.||++|||+.|+++
T Consensus 261 -------~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 261 -------LK--------------------NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -------CT--------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------cC--------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00123456789999999999999999999986
No 64
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.1e-41 Score=351.05 Aligned_cols=278 Identities=21% Similarity=0.237 Sum_probs=197.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
+|+++++||+|+||.||+|++..+++.||+|+++..... ....+.+|+.++++++||||+++++++ .++...+
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 77 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEEE
Confidence 478899999999999999999999999999999743322 236678999999999999999999995 4566899
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+++ ++.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~-~l~~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~D 144 (292)
T 3o0g_A 78 LVFEFCDQ-DLKKYFDSC---------NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLAN 144 (292)
T ss_dssp EEEECCSE-EHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCC-CHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 99999965 666655422 24588999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|..||.........+..........
T Consensus 145 fg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~ 222 (292)
T 3o0g_A 145 FGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222 (292)
T ss_dssp CTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cccceecCCcccc--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999876533222 22346899999996665555689999999999999999999888642221111122221111110
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....+.............. .................+.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 223 TEEQWPSMTKLPDYKPYPM---YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTTCTTGGGSTTCCCCCC---CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Chhhhhhhccccccccccc---ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000000000000000000 00000000011133456789999999999999999999985
No 65
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=358.77 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=200.0
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+..|++++.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++|||||++++++ .+..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 45788999999999999999999999999999999742 233456778999999999999999999994 5566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+.+|+|.+++... ..+++..++.++.||+.||.|||+. ||+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQN----------VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTT----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEE
Confidence 899999999999999998643 4588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccC--CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~--~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
|+|||++........ .....||+.|+|||.+.. +..++.++||||+||++|||++|+.||...... .......
T Consensus 156 L~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~ 230 (384)
T 4fr4_A 156 ITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVH 230 (384)
T ss_dssp ECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHH
T ss_pred EeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHH
Confidence 999999987654322 223569999999965543 346899999999999999999999998632111 1111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCC-HHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMN-MTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 701 (741)
. +....... +......+.+++.+||+.||++||+ +.++++
T Consensus 231 ~---------~~~~~~~~-------------------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 231 T---------FETTVVTY-------------------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp H---------HHHCCCCC-------------------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred H---------HhhcccCC-------------------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0 00000000 0123456889999999999999998 666653
No 66
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.1e-41 Score=357.66 Aligned_cols=255 Identities=18% Similarity=0.212 Sum_probs=200.7
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+...|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ .+.
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~ 100 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE 100 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence 456789999999999999999999999999999999974332 2345678999999999999999999994 556
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC---
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE--- 551 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~--- 551 (741)
...|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.+
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~ 167 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKG 167 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTT
T ss_pred CEEEEEEecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCC
Confidence 6899999999999999988643 4588999999999999999999999 99999999999999865
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+.+||+|||++........ .....||+.|+||| +..+..++.++||||+||++|+|++|..||..... ......
T Consensus 168 ~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~ 241 (362)
T 2bdw_A 168 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQ 241 (362)
T ss_dssp CCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred CCEEEeecCcceEecCCcc---cccCCCCccccCHH-HHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHH
Confidence 4699999999987654332 22356999999995 55667899999999999999999999999863211 011000
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
+... ...... .....+++.+.+++.+||+.||++|||+.|+++.
T Consensus 242 i~~~-----------~~~~~~----------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 242 IKAG-----------AYDYPS----------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHT-----------CCCCCT----------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHhC-----------CCCCCc----------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 000000 0001234567899999999999999999998753
No 67
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-40 Score=358.91 Aligned_cols=253 Identities=22% Similarity=0.255 Sum_probs=195.0
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
...|++++.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..+++++ +||||++++++ +.+.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC-----FQTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE-----EECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE-----EEEC
Confidence 357899999999999999999999999999999997532 23345678899999887 89999999999 4566
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||+++|+|..++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQ----------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCE
Confidence 7899999999999999998643 4589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+....... .....+||+.|+|| |+..+..++.++||||+||++|||++|+.||...........
T Consensus 193 kL~DFGla~~~~~~~~--~~~~~~gt~~Y~aP-E~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~----- 264 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGD--TTSTFCGTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ----- 264 (396)
T ss_dssp EECCCTTCBCCCCTTC--CBCCCCBCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------
T ss_pred EEeecceeeecccCCC--ccccccCCcccCCc-hhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-----
Confidence 9999999986433222 12335799999999 555677899999999999999999999999963321111000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM 696 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 696 (741)
.....+......... ..+......+.+++.+||+.||++||++
T Consensus 265 ---~~~~~~~~~i~~~~~----------------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 265 ---NTEDYLFQVILEKQI----------------RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCHHHHHHHHHHCCC----------------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---hhHHHHHHHHhcccc----------------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 000000000000000 0011234567899999999999999996
No 68
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=347.67 Aligned_cols=253 Identities=22% Similarity=0.266 Sum_probs=193.8
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--------------------------CcchhHHHHHHHHH
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--------------------------GASKSSIAECSALR 452 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 452 (741)
...|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999974321 12356789999999
Q ss_pred hcCCCceeeEeeeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC
Q 037916 453 NIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC 532 (741)
Q Consensus 453 ~l~hpnIv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 532 (741)
+++||||+++++++.. ......++||||+++++|.+++.. ..+++..+..++.|++.||+|||+.
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~- 156 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTL-----------KPLSEDQARFYFQDLIKGIEYLHYQ- 156 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCS-----------SCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999999999999642 235688999999999999887542 4588999999999999999999999
Q ss_pred CCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCC--CCCccCchhHHHHHHH
Q 037916 533 QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSE--VSINGDVYSYGILLLE 610 (741)
Q Consensus 533 ~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~--~~~~~DIwSlG~il~e 610 (741)
+|+||||||+||+++.++.+||+|||++......... .....||+.|+|||.+..... ++.++||||+||++|+
T Consensus 157 --~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 157 --KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp --TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred --CeeccCCCHHHEEECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 9999999999999999999999999999876543221 223569999999965543332 4788999999999999
Q ss_pred HHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCC
Q 037916 611 LMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESP 690 (741)
Q Consensus 611 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 690 (741)
|++|+.||.... ...... .+......... ....++.+.+++.+||+.||
T Consensus 233 l~~g~~pf~~~~-----~~~~~~--------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 233 FVFGQCPFMDER-----IMCLHS--------KIKSQALEFPD------------------QPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHSSCSSCCSS-----HHHHHH--------HHHHCCCCCCS------------------SSCCCHHHHHHHHHHTCSCT
T ss_pred HHHCCCCCCCcc-----HHHHHH--------HHhcccCCCCC------------------ccccCHHHHHHHHHHhhcCh
Confidence 999999986321 111100 00000000000 01234568899999999999
Q ss_pred CCCCCHHHHHH
Q 037916 691 QDRMNMTIVVH 701 (741)
Q Consensus 691 ~~RPs~~evl~ 701 (741)
++|||+.|+++
T Consensus 282 ~~R~s~~e~l~ 292 (298)
T 2zv2_A 282 ESRIVVPEIKL 292 (298)
T ss_dssp TTSCCHHHHTT
T ss_pred hhCCCHHHHhc
Confidence 99999999874
No 69
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.9e-40 Score=383.96 Aligned_cols=307 Identities=17% Similarity=0.203 Sum_probs=156.6
Q ss_pred CCccCC--CCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc-Ccc-cCCchhhccc------ccc
Q 037916 37 IPSSMF--NASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN-FGG-LLPGCICNFS------ITL 106 (741)
Q Consensus 37 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~-l~~-~~~~~~~~l~------~~L 106 (741)
+|..++ ++++|++|+|++|++.+.+|..|.++++ |++|+|++|+ +++ .+|..+..+. .+|
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~----------L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L 550 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPE----------LQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSS----------CCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCC----------CCEEECcCCCCcccccchHHHHhhhhcccccCCc
Confidence 444433 4444444444444444444444444433 5555555554 444 3443333221 145
Q ss_pred cEEEccCCcccccCCc--cccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcc-cceeec
Q 037916 107 ETLIFNSNKIFRSIPA--GIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKK-LLQLYL 183 (741)
Q Consensus 107 ~~L~L~~n~i~~~~~~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L 183 (741)
+.|+|++|++. .+|. .|.++++|++|+|++|+|+ .+| .|..+++|+.|+|++|+++ .+|..|.++++ |++|+|
T Consensus 551 ~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~L 626 (876)
T 4ecn_A 551 QIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGF 626 (876)
T ss_dssp CEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEEC
T ss_pred cEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEEC
Confidence 55555555544 3444 4555555555555555554 233 4455555555555555554 44444555554 555555
Q ss_pred cCcccccccCcccccCCC--CCEEeccCccccccCCccc---c--ccccceeEEEcCCCccCCCCChhhcCCCCCcEEEe
Q 037916 184 IENFLQVSIPSSLGQCQS--LTTINLSYNNLSGTIPPQL---M--DLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFI 256 (741)
Q Consensus 184 ~~N~i~~~~~~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 256 (741)
++|.++ .+|..+..++. |+.|+|++|++++.+|... . .+.+|+. |+|++|+|...++..+..+++|+.|+|
T Consensus 627 s~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~-L~Ls~N~L~~lp~~~~~~l~~L~~L~L 704 (876)
T 4ecn_A 627 SHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAST-VTLSYNEIQKFPTELFATGSPISTIIL 704 (876)
T ss_dssp CSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEE-EECCSSCCCSCCHHHHHTTCCCSEEEC
T ss_pred cCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCE-EEccCCcCCccCHHHHccCCCCCEEEC
Confidence 555554 34444443332 5555555555544333221 1 2224554 666666665333333445666666666
Q ss_pred ccccccchhhhhcccc-------ccccEEEeCCCccCCCCChhcc--cCccCCeeeCCCCcCCCccchhhhccccCCccc
Q 037916 257 SRNMLECEILSTLGSC-------IKLEQLKLGGNLFQGPIPLSLS--SLRGLRVLDLSQNNISGEIPKFLVELQLVQNLN 327 (741)
Q Consensus 257 s~N~l~~~~~~~~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 327 (741)
++|+|+.++...+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+
T Consensus 705 s~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~ 782 (876)
T 4ecn_A 705 SNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFG 782 (876)
T ss_dssp CSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEE
T ss_pred CCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEE
Confidence 6666665444444332 26666666666666 4555554 66666666666666665 455566666666666
Q ss_pred ccC------cccccccCCc-cccCCcccccccCCCCccccCCC
Q 037916 328 LSY------NDLEGVIPTE-GVFKNASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 328 l~~------N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~~~ 363 (741)
|++ |.+.+.+|.. ..++.++.+++.+|.. +.+|.
T Consensus 783 Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L--~~Ip~ 823 (876)
T 4ecn_A 783 IRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI--RKVDE 823 (876)
T ss_dssp CCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC--CBCCS
T ss_pred CCCCCCcccccccccChHHHhcCCCCCEEECCCCCC--CccCH
Confidence 654 5555555433 4456666666666654 44444
No 70
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-40 Score=346.65 Aligned_cols=269 Identities=15% Similarity=0.140 Sum_probs=210.1
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCceE
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
...|++.+.||+|+||.||+|++..+++.||+|++.. ....+.+.+|+.+++.+ +|++|+++++++ ......
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEEC--CTTSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEecc--CCccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCcee
Confidence 3568899999999999999999988999999999863 23456788999999999 799999999984 456689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc----
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT---- 553 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~---- 553 (741)
++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLC---------GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 99999999643 23588999999999999999999999 9999999999999987765
Q ss_pred -eEEeecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 554 -AHVADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 554 -~kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
+||+|||.+......... .......||+.|+||| ...+..++.++|||||||++|||++|+.||........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 226 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN-THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN- 226 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHH-HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCch-hhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-
Confidence 999999999876544221 1223456999999995 55677789999999999999999999999974321110
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
..... .+...... .........+++.+.+++.+||+.||++|||+.||++.|+++.
T Consensus 227 -~~~~~--------~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 227 -KQKYE--------RIGEKKQS---------------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp -HHHHH--------HHHHHHHH---------------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred -HHHHH--------HHHhhccC---------------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 00000 00000000 0000001134567899999999999999999999999999999
Q ss_pred HhhcCC
Q 037916 708 SILLGP 713 (741)
Q Consensus 708 ~~~~~~ 713 (741)
+....+
T Consensus 283 ~~~~~~ 288 (298)
T 1csn_A 283 ERLNTT 288 (298)
T ss_dssp HHTTCC
T ss_pred HhcCCC
Confidence 876543
No 71
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.9e-41 Score=343.19 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=203.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|+.++++++||||+++++++ .+....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 82 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPICL 82 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceEE
Confidence 45788899999999999999997 57789999997432 3346788999999999999999999995 45567899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 150 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQ---------RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 150 (269)
T ss_dssp EEECCTTCBHHHHHHTT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCT
T ss_pred EEEeCCCCcHHHHHHhc---------CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccc
Confidence 99999999999998643 24588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+......... ......+|+.|+||| +..+..++.++||||+|+++|+|++ |+.||...... .....
T Consensus 151 g~~~~~~~~~~~-~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~---- 219 (269)
T 4hcu_A 151 GMTRFVLDDQYT-SSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED---- 219 (269)
T ss_dssp TGGGGBCCHHHH-STTSTTCCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH----
T ss_pred cccccccccccc-cccCcccccccCCHH-HhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH----
Confidence 999876543221 222345788899995 4556778999999999999999999 99998632111 11110
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
+... ..... +...++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 220 ----~~~~-~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 220 ----ISTG-FRLYK------------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----HHTT-CCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----HhcC-ccCCC------------------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0000 00000 011235688999999999999999999999999998763
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.1e-41 Score=357.41 Aligned_cols=258 Identities=21% Similarity=0.241 Sum_probs=200.7
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-----cCcchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-----HGASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
.+...|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~----- 95 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY----- 95 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----
Confidence 35578999999999999999999999999999999996321 12356788999999999999999999994
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
......|+||||+++++|.+++.... .....+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 96 ~~~~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~ 166 (351)
T 3c0i_A 96 SSDGMLYMVFEFMDGADLCFEIVKRA------DAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASK 166 (351)
T ss_dssp EETTEEEEEEECCSSCBHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSS
T ss_pred EeCCEEEEEEeCCCCCCHHHHHHHhc------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecC
Confidence 45668999999999999988875321 1123478999999999999999999999 99999999999999866
Q ss_pred C---ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 552 M---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 552 ~---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
+ .+||+|||++......... .....||+.|+||| +..+..++.++||||+||++|+|++|..||..... ..+
T Consensus 167 ~~~~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~ 241 (351)
T 3c0i_A 167 ENSAPVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLF 241 (351)
T ss_dssp STTCCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHH
T ss_pred CCCCcEEEecCcceeEecCCCee--ecCCcCCcCccCHH-HHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHH
Confidence 5 4999999999877654322 22356999999994 55667789999999999999999999999863210 000
Q ss_pred hhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 629 HNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 629 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. .+......... ......++.+.+++.+||+.||++|||+.|+++
T Consensus 242 ~------------~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 242 E------------GIIKGKYKMNP----------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H------------HHHHTCCCCCH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H------------HHHcCCCCCCc----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 01100000000 001123466889999999999999999999985
No 73
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.9e-41 Score=358.88 Aligned_cols=275 Identities=16% Similarity=0.189 Sum_probs=204.2
Q ss_pred HHHHhhhcccCceeeEEEEEEcCC-----CeEEEEEEeeccCcC-----------cchhHHHHHHHHHhcCCCceeeEee
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEG-----KTIIAVKVLNLLHHG-----------ASKSSIAECSALRNIRHKNLVKILT 464 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~hpnIv~~~~ 464 (741)
.|++.+.||+|+||.||+|.+..+ ++.||+|++...... .......|+..++.++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 588899999999999999999754 578999998643211 1122334555666778999999999
Q ss_pred eecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 465 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
++.... .+..+.|+||||+ +++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+
T Consensus 116 ~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~---------~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~ 181 (364)
T 3op5_A 116 SGLHDK-NGKSYRFMIMDRF-GSDLQKIYEAN---------AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKAS 181 (364)
T ss_dssp EEEEEE-TTEEEEEEEEECE-EEEHHHHHHHT---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred eeeecc-CCcceEEEEEeCC-CCCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHH
Confidence 975421 2235689999999 99999998642 24589999999999999999999999 9999999999
Q ss_pred CeEeC--CCCceEEeecccccccCCCCccc-----ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCC
Q 037916 545 NVLLD--HEMTAHVADFGLAKLLPPAHLQT-----SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617 (741)
Q Consensus 545 NIll~--~~~~~kL~DFg~a~~~~~~~~~~-----~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p 617 (741)
|||++ .++.+||+|||+++......... ......||+.|+||| +..+..++.++|||||||++|||++|+.|
T Consensus 182 Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~~l~el~~g~~P 260 (364)
T 3op5_A 182 NLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID-AHNGVAPSRRGDLEILGYCMIQWLTGHLP 260 (364)
T ss_dssp GEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH-HHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH-HhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99999 88999999999998765432211 112345999999994 55677799999999999999999999999
Q ss_pred CCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHH
Q 037916 618 SDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMT 697 (741)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 697 (741)
|...... ................++++..+.. ..++..+.+++..||+.||++|||+.
T Consensus 261 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~cl~~~p~~RP~~~ 318 (364)
T 3op5_A 261 WEDNLKD-PKYVRDSKIRYRENIASLMDKCFPA---------------------ANAPGEIAKYMETVKLLDYTEKPLYE 318 (364)
T ss_dssp TGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT---------------------TCCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred ccccccC-HHHHHHHHHHhhhhHHHHHHHhccc---------------------ccCHHHHHHHHHHHhcCCCCCCCCHH
Confidence 9732211 1111111111111222222222110 12356788999999999999999999
Q ss_pred HHHHHHHHHHHhhcC
Q 037916 698 IVVHELQSIKSILLG 712 (741)
Q Consensus 698 evl~~L~~i~~~~~~ 712 (741)
+|++.|+++.+....
T Consensus 319 ~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 319 NLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999986553
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2e-40 Score=351.53 Aligned_cols=259 Identities=20% Similarity=0.275 Sum_probs=197.8
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccc-----
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDY----- 471 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----- 471 (741)
+...|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||++++++|.....
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 46789999999999999999999998999999999974332 345678899999999999999999998743210
Q ss_pred -----------------------------------------------cCCceEEEEEecccCCChhhhccCCCCCCcccC
Q 037916 472 -----------------------------------------------KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE 504 (741)
Q Consensus 472 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~ 504 (741)
....+.++||||+++++|.+++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~------- 156 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC------- 156 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-------
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-------
Confidence 11234899999999999999997541
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcc----------ccc
Q 037916 505 APKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQ----------TSS 574 (741)
Q Consensus 505 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~----------~~~ 574 (741)
.....++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 157 ~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T 3qd2_B 157 SLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233 (332)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CC
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccc
Confidence 223456677899999999999999999 9999999999999999999999999999877654211 122
Q ss_pred ccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcch
Q 037916 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDED 654 (741)
Q Consensus 575 ~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 654 (741)
....||+.|+||| +..+..++.++||||+||++|||++|..|+.... ............
T Consensus 234 ~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------------------~~~~~~~~~~~~- 292 (332)
T 3qd2_B 234 TGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------------------RIITDVRNLKFP- 292 (332)
T ss_dssp CSCC-CGGGSCHH-HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------------------HHHHHHHTTCCC-
T ss_pred cccCCCcCccChH-HhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------------------HHHHHhhccCCC-
Confidence 3356999999995 5556788999999999999999999877642110 000000000000
Q ss_pred hhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 655 LTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.......+.+.+++.+||+.||++|||+.|+++
T Consensus 293 --------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 --------------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp --------------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred --------------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 111234456789999999999999999999986
No 75
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3e-41 Score=374.07 Aligned_cols=204 Identities=24% Similarity=0.312 Sum_probs=160.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
.+|++++.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.....+.....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 46899999999999999999999999999999986422 2234567899999999999999999999865544556789
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 133 ~lv~e~~-~~~L~~~~~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~ 198 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP----------VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVC 198 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEEC
T ss_pred EEEEecc-ccchhhhcccC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeec
Confidence 9999998 67999988643 4589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcc-------------------------cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHH
Q 037916 558 DFGLAKLLPPAHLQ-------------------------TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612 (741)
Q Consensus 558 DFg~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ell 612 (741)
|||+|+........ .......||+.|+|||.+..+..++.++||||+||++|||+
T Consensus 199 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp CCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence 99999876532211 12234568999999976667778999999999999999999
Q ss_pred cCCCC
Q 037916 613 TRKRP 617 (741)
Q Consensus 613 tg~~p 617 (741)
+|..|
T Consensus 279 tg~~~ 283 (458)
T 3rp9_A 279 NMIKE 283 (458)
T ss_dssp TTSTT
T ss_pred Hhccc
Confidence 95433
No 76
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.8e-40 Score=376.07 Aligned_cols=157 Identities=18% Similarity=0.263 Sum_probs=144.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|.+++.++ .+|..++ ++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.|.+|.++++ |
T Consensus 17 ~c~~~~l~-~ip~~~~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~----------L 82 (606)
T 3vq2_A 17 QCMDQKLS-KVPDDIP---SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHH----------L 82 (606)
T ss_dssp ECTTSCCS-SCCTTSC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTT----------C
T ss_pred EccCCCcc-cCCCCCC---CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhh----------c
Confidence 45677777 8898876 89999999999999999999999999999999999999988999999986 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEccccccccc-CCccccCCCcCcEEEcc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT-ISPAIGELQNLVTLAIN 160 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~ 160 (741)
++|+|++|++++..|..|.++. +|++|+|++|++.+..+..|.++++|++|+|++|+++++ .|..|.++++|++|+|+
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls 161 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLT-SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLS 161 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCT-TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECC
T ss_pred CEeECCCCcccccChhhcCCcc-cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEcc
Confidence 9999999999999999999998 999999999999988889999999999999999999874 58999999999999999
Q ss_pred cCCCCCcCccccc
Q 037916 161 TNKLSGNIPPSIG 173 (741)
Q Consensus 161 ~N~l~~~~~~~~~ 173 (741)
+|+++++.+..|+
T Consensus 162 ~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 162 YNYIQTITVNDLQ 174 (606)
T ss_dssp SSCCCEECTTTTH
T ss_pred CCcceecChhhhh
Confidence 9999877665443
No 77
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-41 Score=353.83 Aligned_cols=259 Identities=24% Similarity=0.309 Sum_probs=200.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeE----EEEEEeecc-CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTI----IAVKVLNLL-HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.|++.+.||+|+||.||+|++..+++. ||+|++... .......+.+|+.++++++||||++++++|. +.
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~ 87 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------GS 87 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------BS
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------CC
Confidence 577889999999999999999877765 777776532 2334466788999999999999999999852 34
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~k 155 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQH---------RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQ 155 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSS---------GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEE
T ss_pred ccEEEEEeCCCCCHHHHHHHc---------cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEE
Confidence 589999999999999998643 24678889999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||+++...............||..|+||| ...+..++.++||||+||++|+|++ |..||..... .........
T Consensus 156 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~ 232 (325)
T 3kex_A 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALE-SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEK 232 (325)
T ss_dssp ECSCSGGGGSCCCTTCCC-----CCTTTSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHT
T ss_pred ECCCCcccccCcccccccccCCCCcccccChH-HhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHc
Confidence 99999999876554433334456888999995 4456678999999999999999999 9999863211 111111111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
.. .... +..++..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 233 ~~------------~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 233 GE------------RLAQ------------------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TC------------BCCC------------------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CC------------CCCC------------------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00 0000 0012334678999999999999999999999999987543
No 78
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=347.42 Aligned_cols=281 Identities=19% Similarity=0.235 Sum_probs=208.2
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
+|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. ......++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~~l 86 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceEEE
Confidence 5788899999999999999999999999999997433 2335667899999999999999999998642 23447899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe----CCCCceE
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL----DHEMTAH 555 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~k 555 (741)
||||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 87 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 156 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYK 156 (319)
T ss_dssp EEECCTTCBHHHHHHSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEE
T ss_pred EEeCCCCCCHHHHHHHhc-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEE
Confidence 999999999999997431 123389999999999999999999999 99999999999999 7778899
Q ss_pred EeecccccccCCCCcccccccccccccccCccccc-------CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG-------LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~-------~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
|+|||.++........ ....||+.|+|||.+. .+..++.++||||+||++|||++|+.||..........
T Consensus 157 L~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 233 (319)
T 4euu_A 157 LTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233 (319)
T ss_dssp ECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH
T ss_pred EccCCCceecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH
Confidence 9999999876554322 2246899999996543 15778999999999999999999999986332221111
Q ss_pred hhhh--hhcCCcc-hhHh---hhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 629 HNFA--RTVLPDH-VMDI---VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 629 ~~~~--~~~~~~~-~~~~---~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
..+. ....+.. ...+ .......... ..............+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 234 EVMYKIITGKPSGAISGVQKAENGPIDWSGD----------MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp HHHHHHHHHCCTTCCEEEECSTTCCEEEESS----------CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred HHHHHHhcCCCcccchhhhcccCCccccCcc----------CCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 1111 0011100 0000 0000000000 000001124567788999999999999999999999998
Q ss_pred HHHHH
Q 037916 703 LQSIK 707 (741)
Q Consensus 703 L~~i~ 707 (741)
..+..
T Consensus 304 ~~d~~ 308 (319)
T 4euu_A 304 TSDIL 308 (319)
T ss_dssp HHHHT
T ss_pred cHHHh
Confidence 87654
No 79
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.6e-41 Score=356.33 Aligned_cols=259 Identities=24% Similarity=0.351 Sum_probs=196.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeE----EEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTI----IAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..|++.+.||+|+||.||+|++..+++. ||+|.++... ....+.+.+|+.++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 4578889999999999999999777665 4777765322 2345678899999999999999999999642
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 89 STVQLITQLMPFGCLLDYVREH---------KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp SSEEEEEECCTTCBHHHHHHHS---------TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred CCeEEEEEecCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCE
Confidence 2378999999999999998643 24588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
||+|||+++...............+|+.|+||| +..+..++.++|||||||++|||++ |+.||...... .......
T Consensus 157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~ 233 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 233 (327)
T ss_dssp EECCTTHHHHHTTTCC-------CCCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEccCcceeEccCCcccccccCCCccccccChH-HhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHH
Confidence 999999998776554333333445788999995 4456788999999999999999999 99998632111 1111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
. ...... ...++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 234 ~------------~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 234 K------------GERLPQ------------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp T------------TCCCCC------------------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred c------------CCCCCC------------------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1 100000 112345688999999999999999999999999998754
No 80
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.7e-40 Score=346.95 Aligned_cols=272 Identities=22% Similarity=0.245 Sum_probs=199.6
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+..+|+++++||+|+||.||+|++. +++.||+|+++.... .....+.+|+.++++++||||+++++++ .++
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccC
Confidence 34567899999999999999999996 589999999974322 2245678999999999999999999994 456
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||++ ++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 92 ~~~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~ 158 (311)
T 3niz_A 92 RCLTLVFEFME-KDLKKVLDEN---------KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGAL 158 (311)
T ss_dssp SCEEEEEECCS-EEHHHHHHTC---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEEcCCC-CCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCE
Confidence 68999999996 5888877533 24588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||......+ ........
T Consensus 159 kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~ 235 (311)
T 3niz_A 159 KLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI 235 (311)
T ss_dssp EECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH
T ss_pred EEccCcCceecCCCccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 99999999876533221 2224589999999766555778999999999999999999999997432221 11111111
Q ss_pred cCC---cchhHh------hhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 635 VLP---DHVMDI------VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 635 ~~~---~~~~~~------~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
... ...... .+.... ... ............+.+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTFQ-VFE----------KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCCC-CCC----------CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhhhhccchhhhcccc-ccc----------CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111 000000 000000 000 00001111233456789999999999999999999985
No 81
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.9e-41 Score=361.25 Aligned_cols=262 Identities=24% Similarity=0.368 Sum_probs=193.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEc---CCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD---EGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|.+.+.||+|+||.||+|++. .++..||+|+++... ....+.+.+|+.++++++||||+++++++ ....
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKSK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSSS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCC
Confidence 35788899999999999999986 467789999997432 22345788999999999999999999995 4456
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 187 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTT---------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEE
Confidence 789999999999999999643 24588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCccc-ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 556 VADFGLAKLLPPAHLQT-SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~-~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
|+|||+++......... ......+++.|+||| +..+..++.++|||||||++||+++ |+.||...... ..
T Consensus 188 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~-- 259 (373)
T 2qol_A 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DV-- 259 (373)
T ss_dssp ECCC----------------------CTTSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HH--
T ss_pred ECcCccccccccCCccceeccCCCcCCCccChh-hhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HH--
Confidence 99999998765432211 112223577899995 4456778999999999999999998 99998632110 01
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
...+........ ...++..+.+++.+||+.||++|||+.||++.|+.+.+...
T Consensus 260 -------~~~i~~~~~~~~------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 260 -------IKAVDEGYRLPP------------------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp -------HHHHHTTEECCC------------------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred -------HHHHHcCCCCCC------------------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 111111100000 11345678899999999999999999999999999987543
No 82
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=349.75 Aligned_cols=286 Identities=23% Similarity=0.277 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-----cCcchhHHHHHHHHHhc---CCCceeeEeee
Q 037916 394 VGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-----HGASKSSIAECSALRNI---RHKNLVKILTV 465 (741)
Q Consensus 394 ~~~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~hpnIv~~~~~ 465 (741)
+|.++..+|++.++||+|+||.||+|++..+++.||+|+++... ........+|+.+++++ +||||++++++
T Consensus 3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~ 82 (308)
T 3g33_A 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV 82 (308)
T ss_dssp -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence 35567789999999999999999999999899999999997432 12234677888887776 49999999999
Q ss_pred ecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCC
Q 037916 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545 (741)
Q Consensus 466 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~N 545 (741)
|...........++||||+. ++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~N 150 (308)
T 3g33_A 83 CATSRTDREIKVTLVFEHVD-QDLRTYLDKAP--------PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPEN 150 (308)
T ss_dssp EEECCSSSEEEEEEEEECCC-CBHHHHHHTCC--------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTT
T ss_pred eeccCCCCceeEEEEehhhh-cCHHHHHhhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence 75433233336899999995 69999987441 23489999999999999999999999 99999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCC
Q 037916 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625 (741)
Q Consensus 546 Ill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~ 625 (741)
|+++.++.+||+|||.+........ .....||+.|+||| +..+..++.++||||+||++|+|++|+.||.......
T Consensus 151 il~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 226 (308)
T 3g33_A 151 ILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPE-VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226 (308)
T ss_dssp EEECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHH-HHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH
T ss_pred EEEcCCCCEEEeeCccccccCCCcc---cCCccccccccCch-HHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999986654322 22356899999995 4456678999999999999999999999986322111
Q ss_pred cchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 626 MNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+..............+........ ................+..+.+.+++.+||+.||++|||+.|+++
T Consensus 227 -~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 227 -QLGKIFDLIGLPPEDDWPRDVSLPR-----GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp -HHHHHHHHHCCCCTTTSCSSCSSCG-----GGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHHhCCCChhhccchhhccc-----cccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1111111100000000000000000 000000000000111234567889999999999999999999885
No 83
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=359.80 Aligned_cols=274 Identities=22% Similarity=0.321 Sum_probs=210.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-------CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-------EGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVD 470 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 470 (741)
.+|.+.+.||+|+||.||+|++. ..+..||+|+++.... .....+.+|+.+++++ +||||++++++|
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~---- 144 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC---- 144 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee----
Confidence 45778889999999999999974 2446899999974322 2335678999999999 999999999995
Q ss_pred ccCCceEEEEEecccCCChhhhccCCCCCCc------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADK------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 471 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
......++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 145 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 220 (382)
T 3tt0_A 145 -TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220 (382)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred -ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence 445578999999999999999975432110 111234689999999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCcccc
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFE 623 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~ 623 (741)
||+++.++.+||+|||+++...............+|+.|+||| +..+..++.++|||||||++|+|++ |..||....
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~- 298 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP- 298 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHH-HHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHH-HhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999998776544333333455789999995 4456789999999999999999999 999986221
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 703 (741)
...... .+........ +..++..+.+++.+||+.||++|||+.||++.|
T Consensus 299 ----~~~~~~---------~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 299 ----VEELFK---------LLKEGHRMDK------------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp ----HHHHHH---------HHHTTCCCCC------------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ----HHHHHH---------HHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111111 1100000000 012345688999999999999999999999999
Q ss_pred HHHHHhhcCCc
Q 037916 704 QSIKSILLGPK 714 (741)
Q Consensus 704 ~~i~~~~~~~~ 714 (741)
+++.......+
T Consensus 348 ~~~~~~~~~~~ 358 (382)
T 3tt0_A 348 DRIVALTSNQE 358 (382)
T ss_dssp HHHHHHSCSCC
T ss_pred HHHHHHHhcCC
Confidence 99997765444
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-40 Score=350.88 Aligned_cols=268 Identities=21% Similarity=0.321 Sum_probs=205.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
..|.+.+.||+|+||.||+|.+. .++..||+|+++... ....+.+.+|+.++++++||||+++++++ ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~ 97 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-----SQ 97 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CS
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----ec
Confidence 35777889999999999999983 456899999997432 22345678999999999999999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCc--------------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceec
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADK--------------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHC 539 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHr 539 (741)
....++||||+++++|.+++........ .......+++.+++.++.|+++||.|||+. +|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 5678999999999999999875422100 001124588999999999999999999999 99999
Q ss_pred CCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCC
Q 037916 540 DLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPS 618 (741)
Q Consensus 540 Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~ 618 (741)
||||+||+++.++.+||+|||.+................+|+.|+|||. ..+..++.++||||+||++|||++ |..||
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHH-HHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhh-hcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999987755443333333457889999954 456678999999999999999999 99998
Q ss_pred CccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH
Q 037916 619 DIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI 698 (741)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 698 (741)
...... ........ ...... +..+++.+.+++.+||+.||++|||+.|
T Consensus 254 ~~~~~~--~~~~~~~~------------~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 254 PGIPPE--RLFNLLKT------------GHRMER------------------PDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp TTCCGG--GHHHHHHT------------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCHH--HHHHHhhc------------CCcCCC------------------CccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 632111 11111110 000000 0133466889999999999999999999
Q ss_pred HHHHHHHHHH
Q 037916 699 VVHELQSIKS 708 (741)
Q Consensus 699 vl~~L~~i~~ 708 (741)
+++.|+++..
T Consensus 302 l~~~l~~~~~ 311 (314)
T 2ivs_A 302 ISKDLEKMMV 311 (314)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=358.55 Aligned_cols=249 Identities=24% Similarity=0.296 Sum_probs=194.5
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
...|++++.||+|+||.||+|++..+++.||+|+++.. .....+...+|..+++.+ +||||++++++ +.+.
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~~ 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC-----FQTP 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE-----EECS
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE-----EEeC
Confidence 45789999999999999999999999999999999743 223445677899999988 79999999999 4566
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~i 163 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKS----------RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHC 163 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCE
Confidence 6899999999999999998643 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+....... .....+||+.|+||| +..+..++.++||||+||++|||++|+.||..... .....
T Consensus 164 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~- 234 (353)
T 3txo_A 164 KLADFGMCKEGICNGV--TTATFCGTPDYIAPE-ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFE- 234 (353)
T ss_dssp EECCCTTCBCSCC-----------CCGGGCCHH-HHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEccccceeecccCCc--cccccCCCcCeEChh-hcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHH-
Confidence 9999999986433322 122356999999995 55566789999999999999999999999863211 11111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH------HHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM------TIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 701 (741)
.+...... . +......+.+++.+||+.||++||++ .|+++
T Consensus 235 -------~i~~~~~~--~------------------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 235 -------AILNDEVV--Y------------------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -------HHHHCCCC--C------------------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -------HHHcCCCC--C------------------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11110000 0 01123557799999999999999998 66664
No 86
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.7e-41 Score=361.85 Aligned_cols=207 Identities=25% Similarity=0.336 Sum_probs=164.3
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc--CcCcchhHHHHHHHHHhcC-CCceeeEeeeecCcccc
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYK 472 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 472 (741)
..+..+|++++.||+|+||.||+|.+..+++.||+|++... .........+|+.+++++. ||||+++++++.. .
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~ 81 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---D 81 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---T
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---C
Confidence 45667899999999999999999999999999999998632 2233456778999999997 9999999999642 3
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
+....|+||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~ 146 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRA-----------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAEC 146 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHH-----------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTC
T ss_pred CCCEEEEEecccC-cCHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCC
Confidence 3457899999996 689988852 3578889999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCc-------------------ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc
Q 037916 553 TAHVADFGLAKLLPPAHL-------------------QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~-------------------~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt 613 (741)
.+||+|||+|+....... ........||+.|+|||.+.....++.++||||+||++|||++
T Consensus 147 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~ 226 (388)
T 3oz6_A 147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC 226 (388)
T ss_dssp CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence 999999999986543110 1112335699999999766555789999999999999999999
Q ss_pred CCCCCCc
Q 037916 614 RKRPSDI 620 (741)
Q Consensus 614 g~~p~~~ 620 (741)
|+.||..
T Consensus 227 g~~pf~~ 233 (388)
T 3oz6_A 227 GKPIFPG 233 (388)
T ss_dssp SSCSCCC
T ss_pred CCCCCCC
Confidence 9999863
No 87
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.4e-41 Score=367.44 Aligned_cols=206 Identities=21% Similarity=0.274 Sum_probs=170.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
.+|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++...........
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 46888999999999999999999999999999997432 2234577899999999999999999999755443344679
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||+. ++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+
T Consensus 106 ~lv~e~~~-~~L~~~~~~~----------~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~ 171 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP----------IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVC 171 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEecCC-cCHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEc
Confidence 99999995 6999998643 4589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcc--------------------cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCC
Q 037916 558 DFGLAKLLPPAHLQ--------------------TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617 (741)
Q Consensus 558 DFg~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p 617 (741)
|||+|+........ .......||+.|+|||.+.....++.++||||+||++|||++|..|
T Consensus 172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 99999876543211 1123466999999997666777899999999999999999997777
Q ss_pred CC
Q 037916 618 SD 619 (741)
Q Consensus 618 ~~ 619 (741)
|.
T Consensus 252 ~~ 253 (432)
T 3n9x_A 252 HI 253 (432)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 88
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.2e-41 Score=356.97 Aligned_cols=281 Identities=24% Similarity=0.275 Sum_probs=208.7
Q ss_pred HHHHHhhhcccCceeeEEEEE----EcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGI----LDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++.+.||+|+||.||+|+ +..+++.||+|++........+.+.+|+.++++++||||+++++++.. .+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCCc
Confidence 468888999999999999999 466899999999976554555678999999999999999999998642 3456
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH---------RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEeecCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEE
Confidence 789999999999999998632 24589999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+......... .......||+.|+||| +..+..++.++||||+||++|+|++|..||........ ..+...
T Consensus 168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~ 244 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCE 244 (327)
T ss_dssp ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHH-HHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC--
T ss_pred EcccccceecccCCccceeeccCCccccccCHH-HhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccc
Confidence 9999999877544321 1222345888999995 44566789999999999999999999999763221100 000000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCC
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
..........+...... ....+..+++.+.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 245 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 245 RDVPALSRLLELLEEGQ---------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp --CCHHHHHHHHHHTTC---------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cccccHHHHHHHhhccc---------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 00011111111000000 00111244567889999999999999999999999999998765543
No 89
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=361.40 Aligned_cols=323 Identities=20% Similarity=0.187 Sum_probs=300.4
Q ss_pred CcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcc
Q 037916 23 LLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNF 102 (741)
Q Consensus 23 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l 102 (741)
-+.++.++++++ .+|..+. ++|++|+|++|+|++..+..|.++++ |++|+|++|+|+++.|..|.++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~----------L~~L~L~~n~i~~~~~~~~~~l 79 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPH----------LEELELNENIVSAVEPGAFNNL 79 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTT----------CCEEECTTSCCCEECTTTTTTC
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCC----------CCEEECCCCccCEeChhhhhCC
Confidence 467999999998 5566553 68999999999999988999999986 9999999999999999999999
Q ss_pred cccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceee
Q 037916 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLY 182 (741)
Q Consensus 103 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 182 (741)
. +|++|+|++|++..+.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.+..|.++++|++|+
T Consensus 80 ~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 80 F-NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158 (477)
T ss_dssp T-TCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEE
T ss_pred c-cCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEE
Confidence 8 999999999999888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecccccc
Q 037916 183 LIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLE 262 (741)
Q Consensus 183 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 262 (741)
|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+. |++++|.+.+.+|..+....+|+.|+|++|+++
T Consensus 159 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~-L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 237 (477)
T 2id5_A 159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKV-LEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 237 (477)
T ss_dssp EESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCE-EEEECCTTCCEECTTTTTTCCCSEEEEESSCCC
T ss_pred CCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccce-eeCCCCccccccCcccccCccccEEECcCCccc
Confidence 9999999888888999999999999999999888889999999998 999999988778777777779999999999999
Q ss_pred chhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc-c
Q 037916 263 CEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE-G 341 (741)
Q Consensus 263 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~ 341 (741)
.+....|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.++.. .
T Consensus 238 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 317 (477)
T 2id5_A 238 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFH 317 (477)
T ss_dssp SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBS
T ss_pred ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcC
Confidence 988889999999999999999999998999999999999999999999999999999999999999999999887754 4
Q ss_pred ccCCcccccccCCCCcccc
Q 037916 342 VFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 342 ~~~~~~~~~~~~n~~~c~~ 360 (741)
.++.++.+++.+|++.|.+
T Consensus 318 ~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 318 SVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CGGGCCEEECCSSCEECSG
T ss_pred CCcccCEEEccCCCccCcc
Confidence 5678999999999999864
No 90
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6e-41 Score=354.23 Aligned_cols=273 Identities=23% Similarity=0.374 Sum_probs=190.8
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCe---EEEEEEeecc--CcCcchhHHHHHHHHHhcCCCceeeEeeeecCcccc-
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKT---IIAVKVLNLL--HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK- 472 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~- 472 (741)
...|++.+.||+|+||.||+|++..++. .||+|+++.. .....+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 3568899999999999999999876664 8999998743 233456788999999999999999999996432211
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
.....++||||+++|+|.+++...... .....+++..++.++.|++.||+|||+. ||+||||||+||+++.++
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIG----ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhcc----ccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 111348999999999999998643111 1123588999999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~ 631 (741)
.+||+|||.+................+++.|+||| ...+..++.++||||+||++|+|++ |..||...... .....
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~ 251 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE-SLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNY 251 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH
T ss_pred CEEEeeccccccccccccccccccccCcccccCch-hhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHH
Confidence 99999999998765544333333445788999995 4456678999999999999999999 89998632211 11100
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
+........ ...+++.+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 252 -----------~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 252 -----------LIGGNRLKQ-------------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp -----------HHTTCCCCC-------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred -----------HhcCCCCCC-------------------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 000000000 11334568899999999999999999999999999987544
No 91
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.2e-40 Score=341.92 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=203.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|+.++++++||||+++++++ ......++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 80 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIYI 80 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEEE
T ss_pred hheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceEE
Confidence 35788899999999999999887 67789999997533 2346788999999999999999999995 45567899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 148 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSH---------GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDF 148 (268)
T ss_dssp EEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCT
T ss_pred EEEccCCCcHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccC
Confidence 99999999999998632 24589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+.......... .....+|+.|+||| ...+..++.++||||+|+++|+|++ |..||....... ....
T Consensus 149 g~~~~~~~~~~~~-~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~---- 217 (268)
T 3sxs_A 149 GMTRYVLDDQYVS-SVGTKFPVKWSAPE-VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLK---- 217 (268)
T ss_dssp TCEEECCTTCEEE-CCSCCCCGGGCCHH-HHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH----
T ss_pred ccceecchhhhhc-ccCCCcCcccCCHH-HHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHH----
Confidence 9998765543222 23345778899995 4556678999999999999999999 999986321110 0000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
......... +...++.+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 218 ----~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 218 ----VSQGHRLYR-------------------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp ----HHTTCCCCC-------------------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred ----HHcCCCCCC-------------------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 000000000 00123467899999999999999999999999988864
No 92
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.4e-40 Score=342.99 Aligned_cols=273 Identities=18% Similarity=0.183 Sum_probs=206.6
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..+..+|++.+.||+|+||.||+|++..+++.||+|++... .....+.+|+.+++.++|++++..+.++ .....
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~ 78 (296)
T 4hgt_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWC----GAEGD 78 (296)
T ss_dssp ------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEE----EEETT
T ss_pred cccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc--ccchHHHHHHHHHHHhcCCCCCCeeeee----cCCCC
Confidence 34557899999999999999999999889999999987642 3345688999999999988877777665 34566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CCCC
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEM 552 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~~~ 552 (741)
..++||||+ +++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~ 145 (296)
T 4hgt_A 79 YNVMVMELL-GPSLEDLFNFC---------SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGN 145 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHT---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTT
T ss_pred ceEEEEEcc-CCCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCC
Confidence 889999999 99999998632 24589999999999999999999999 99999999999999 7888
Q ss_pred ceEEeecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 553 TAHVADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
.+||+|||.+......... .......||+.|+|| |...+..++.++||||+||++|+|++|+.||.........
T Consensus 146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 224 (296)
T 4hgt_A 146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI-NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 224 (296)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCH-HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS
T ss_pred eEEEecCccceeccCcccCccCCCCcccccCCCccccch-HHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh
Confidence 9999999999876544221 112235699999999 5556777999999999999999999999999743221110
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
... ..+........ .......+++.+.+++.+||+.||++|||+.||++.|+++.
T Consensus 225 --~~~--------~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 225 --QKY--------ERISEKKMSTP---------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp --SHH--------HHHHHHHHHSC---------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred --hhh--------hhhhcccccch---------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 000 00000000000 00000123567889999999999999999999999999999
Q ss_pred HhhcCC
Q 037916 708 SILLGP 713 (741)
Q Consensus 708 ~~~~~~ 713 (741)
+....+
T Consensus 280 ~~~~~~ 285 (296)
T 4hgt_A 280 HRQGFS 285 (296)
T ss_dssp HHHTCC
T ss_pred HHhCCC
Confidence 877643
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=357.21 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=200.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|+.++++++||||+++++++ .+....++
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~l 125 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMVL 125 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEEE
Confidence 4688999999999999999999999999999999754444455788999999999999999999994 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC--CCceEEe
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH--EMTAHVA 557 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL~ 557 (741)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+. ||+||||||+||+++. ++.+||+
T Consensus 126 v~E~~~gg~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~ 193 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE---------DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKII 193 (387)
T ss_dssp EEECCCCCBHHHHTTCT---------TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEEC
T ss_pred EEEcCCCCcHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEE
Confidence 99999999999998643 23588999999999999999999999 9999999999999974 4689999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||++......... ....||+.|+|| |+..+..++.++||||+||++|||++|..||...... ..+.........
T Consensus 194 DFG~a~~~~~~~~~---~~~~gt~~y~aP-E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~ 268 (387)
T 1kob_A 194 DFGLATKLNPDEIV---KVTTATAEFAAP-EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWE 268 (387)
T ss_dssp CCTTCEECCTTSCE---EEECSSGGGCCH-HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCC
T ss_pred ecccceecCCCcce---eeeccCCCccCc-hhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC
Confidence 99999876544322 224589999999 5556778899999999999999999999998632110 000000000000
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 269 ------------~~~~----------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 269 ------------FDED----------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ------------CCSS----------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ------------CCcc----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0000 00123456889999999999999999999986
No 94
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=350.62 Aligned_cols=246 Identities=20% Similarity=0.259 Sum_probs=200.3
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--------CcchhHHHHHHHHHhcCCCceeeEeeeecC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--------GASKSSIAECSALRNIRHKNLVKILTVCSG 468 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 468 (741)
.+..+|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~-- 98 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF-- 98 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE--
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence 466889999999999999999999999999999999975321 1334667899999999999999999994
Q ss_pred ccccCCceEEEEEecccCC-ChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeE
Q 037916 469 VDYKGDDFKALVYEFMHNG-SLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVL 547 (741)
Q Consensus 469 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIl 547 (741)
.+....++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 99 ---~~~~~~~lv~e~~~~g~~l~~~~~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 162 (335)
T 3dls_A 99 ---ENQGFFQLVMEKHGSGLDLFAFIDRH----------PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIV 162 (335)
T ss_dssp ---ECSSEEEEEEECCTTSCBHHHHHHTC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred ---eeCCEEEEEEEeCCCCccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEE
Confidence 5566899999998766 999998643 4588999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 548 LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 548 l~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
++.++.+||+|||.+......... ....||+.|+|||.+.....++.++||||+||++|+|++|..||.....
T Consensus 163 l~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---- 235 (335)
T 3dls_A 163 IAEDFTIKLIDFGSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---- 235 (335)
T ss_dssp ECTTSCEEECCCTTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----
T ss_pred EcCCCcEEEeecccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----
Confidence 999999999999999876554322 2256899999996554444458899999999999999999999863211
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
....... .. ..+.+.+.+++.+||+.||++|||+.|+++.
T Consensus 236 ---~~~~~~~------------~~--------------------~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ---TVEAAIH------------PP--------------------YLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---GTTTCCC------------CS--------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HHhhccC------------CC--------------------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00 0123457899999999999999999999875
No 95
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.9e-40 Score=342.79 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=198.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCc-------chhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA-------SKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
..|++.+.||+|+||.||+|++..+++.||+|++....... .+.+.+|+.++++++||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 93 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH----- 93 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET-----
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec-----
Confidence 45788899999999999999999899999999986433222 257789999999999999999999953
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLDH 550 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~~ 550 (741)
+.. ++||||+++++|.+++... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.
T Consensus 94 ~~~--~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~ 159 (287)
T 4f0f_A 94 NPP--RMVMEFVPCGDLYHRLLDK---------AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQS 159 (287)
T ss_dssp TTT--EEEEECCTTCBHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESC
T ss_pred CCC--eEEEEecCCCCHHHHHhcc---------cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEec
Confidence 222 6999999999998887533 24588999999999999999999999 8 999999999999988
Q ss_pred CCc-----eEEeecccccccCCCCcccccccccccccccCccccc-CCCCCCCccCchhHHHHHHHHHcCCCCCCccccC
Q 037916 551 EMT-----AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG-LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEG 624 (741)
Q Consensus 551 ~~~-----~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~-~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~ 624 (741)
++. +||+|||.++..... .....||+.|+|||.+. ....++.++||||+||++|+|++|+.||......
T Consensus 160 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 234 (287)
T 4f0f_A 160 LDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234 (287)
T ss_dssp CCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred cCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence 776 999999999754332 22356899999996553 3456789999999999999999999998633222
Q ss_pred CcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHH
Q 037916 625 NMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704 (741)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 704 (741)
.......... ....... +..+++.+.+++.+||+.||++|||+.|+++.|+
T Consensus 235 ~~~~~~~~~~-----------~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 235 KIKFINMIRE-----------EGLRPTI------------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHHHHHHHH-----------SCCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHhc-----------cCCCCCC------------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111111110 0000000 1133467889999999999999999999999998
Q ss_pred HH
Q 037916 705 SI 706 (741)
Q Consensus 705 ~i 706 (741)
++
T Consensus 286 ~l 287 (287)
T 4f0f_A 286 EL 287 (287)
T ss_dssp TC
T ss_pred hC
Confidence 64
No 96
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-40 Score=356.42 Aligned_cols=254 Identities=20% Similarity=0.204 Sum_probs=189.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.+|++.+.||+|+||.||+|++..+++.||+|++... ....+.+.+|+.+++.++||||+++++++ ......++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~~l 93 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHLAI 93 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS-TTSCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC-ccccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEEEE
Confidence 4688999999999999999999999999999999753 23356788999999999999999999995 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc--eEEe
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT--AHVA 557 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~--~kL~ 557 (741)
||||+++|+|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 94 v~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~ 160 (361)
T 3uc3_A 94 IMEYASGGELYERICNA----------GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKIC 160 (361)
T ss_dssp EEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEEC
T ss_pred EEEeCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEe
Confidence 99999999999998532 4588999999999999999999999 9999999999999987765 9999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||+++....... .....||+.|+|||.+......+.++||||+||++|+|++|+.||....... .+.......
T Consensus 161 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~-- 234 (361)
T 3uc3_A 161 DFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRI-- 234 (361)
T ss_dssp CCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHH--
T ss_pred ecCccccccccCC---CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHH--
Confidence 9999875433221 1234699999999655444444555999999999999999999997432211 111111111
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
......... .....+.+.+++.+||+.||++|||+.|+++-
T Consensus 235 ------~~~~~~~~~------------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 235 ------LSVKYSIPD------------------DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------HTTCCCCCT------------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------hcCCCCCCC------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000000000 00123567899999999999999999999864
No 97
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-41 Score=357.41 Aligned_cols=272 Identities=24% Similarity=0.355 Sum_probs=205.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
...|++.+.||+|+||.||+|++. .+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ .
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 120 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-----A 120 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----C
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----c
Confidence 356888999999999999999996 3558999999974322 2345688999999999999999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCC--------------cccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCcee
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGAD--------------KTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH 538 (741)
.....++||||+++|+|.+++....... ........+++.+++.++.||++||.|||+. +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 4567899999999999999987532110 0000125689999999999999999999999 9999
Q ss_pred cCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCC
Q 037916 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRP 617 (741)
Q Consensus 539 rDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p 617 (741)
|||||+||+++.++.+||+|||.+................+|+.|+|||. ..+..++.++|||||||++|||++ |..|
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES-IFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH-HHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhh-hccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999987654433233333568899999954 455678999999999999999999 9999
Q ss_pred CCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHH
Q 037916 618 SDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMT 697 (741)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 697 (741)
|..... ...... +.+...... +..++..+.+++.+||+.||++|||+.
T Consensus 277 ~~~~~~-----~~~~~~--------~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ 324 (343)
T 1luf_A 277 YYGMAH-----EEVIYY--------VRDGNILAC-------------------PENCPLELYNLMRLCWSKLPADRPSFC 324 (343)
T ss_dssp TTTSCH-----HHHHHH--------HHTTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCh-----HHHHHH--------HhCCCcCCC-------------------CCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 863211 111100 000000000 013345688999999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 037916 698 IVVHELQSIKSILL 711 (741)
Q Consensus 698 evl~~L~~i~~~~~ 711 (741)
|+++.|+++.+.+.
T Consensus 325 ~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 325 SIHRILQRMCERAE 338 (343)
T ss_dssp HHHHHHHHTTC---
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999886554
No 98
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=351.71 Aligned_cols=277 Identities=19% Similarity=0.218 Sum_probs=197.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
.+|++++.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++ ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCeE
Confidence 4688899999999999999999989999999998643222 235567899999999999999999995 455689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQ----------RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEEECCSEEHHHHHHHTS----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCchHHHHHhhh----------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEe
Confidence 9999999999999887533 4588999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|..||......+ ..........
T Consensus 145 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~ 220 (311)
T 4agu_A 145 DFGFARLLTGPSDY--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLG 220 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHC
T ss_pred eCCCchhccCcccc--cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhc
Confidence 99999876543222 1234689999999766556788999999999999999999999986432111 1111111000
Q ss_pred ---cchhHhhhh-cccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 ---DHVMDIVDS-TLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ---~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
+.....+.. ............... .........+..+.+++.+||+.||++|||+.|+++-
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 221 DLIPRHQQVFSTNQYFSGVKIPDPEDME----PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp SCCHHHHHHHHTCGGGTTCCCCCCSSCC----CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccccccCcCCCccccc----hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000011100 000000000000000 0000012345668899999999999999999999853
No 99
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=346.09 Aligned_cols=260 Identities=25% Similarity=0.334 Sum_probs=196.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|++. ++.||+|+++. ....+.+.+|+.++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 45778899999999999999985 78899999863 334567889999999999999999999853 23689
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc-eEEee
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT-AHVAD 558 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~-~kL~D 558 (741)
||||+++++|.+++.... ....+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|
T Consensus 77 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAE-------PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp EEECCTTCBHHHHHHCSS-------SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred EEEcCCCCCHHHHHhccC-------CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 999999999999997441 1234788889999999999999999921129999999999999998886 79999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||.+....... ....||+.|+||| +..+..++.++|||||||++|||++|+.||....................
T Consensus 150 fg~~~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 223 (307)
T 2eva_A 150 FGTACDIQTHM-----TNNKGSAAWMAPE-VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223 (307)
T ss_dssp CCC-----------------CCTTSSCHH-HHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC
T ss_pred ccccccccccc-----ccCCCCCceEChh-hhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC
Confidence 99997554321 2245899999994 55677889999999999999999999999863221111000000000000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCC
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
. ....++..+.+++.+||+.||++|||+.|+++.|+.+.+..+..
T Consensus 224 ------------~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 224 ------------P------------------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp ------------C------------------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred ------------C------------------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 0 00123456789999999999999999999999999998877643
No 100
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.4e-40 Score=340.74 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=201.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|+.++++++||||+++++++ .+....++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 96 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPIFI 96 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEEE
T ss_pred HHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCeEE
Confidence 35788899999999999999987 67889999997432 2346788999999999999999999995 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 97 v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Df 164 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM---------RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDF 164 (283)
T ss_dssp EECCCTTCBHHHHHHCG---------GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECST
T ss_pred EEeccCCCcHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccc
Confidence 99999999999998642 24588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+......... ......+|+.|+||| +..+..++.++||||+|+++|+|++ |+.||...... ........
T Consensus 165 g~~~~~~~~~~~-~~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~---- 236 (283)
T 3gen_A 165 GLSRYVLDDEYT-SSVGSKFPVRWSPPE-VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQ---- 236 (283)
T ss_dssp TGGGGBCCHHHH-STTSTTSCGGGCCHH-HHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHT----
T ss_pred cccccccccccc-cccCCccCcccCCHH-HhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhc----
Confidence 999876543221 222344788999995 4456678999999999999999998 99998632111 00000000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
...... +...++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 237 --------~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 237 --------GLRLYR------------------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --------TCCCCC------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------ccCCCC------------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 000000 011235678999999999999999999999999998764
No 101
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.7e-41 Score=352.30 Aligned_cols=267 Identities=19% Similarity=0.233 Sum_probs=194.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.+|++.+.||+|+||.||+|++..+++.||+|+++..... ....+.+|+.++++++||||+++++++.... ..+..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCcc
Confidence 4688999999999999999999989999999999753222 2346788999999999999999999864322 12235
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 157 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE----------GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKV 157 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEE
T ss_pred cEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEE
Confidence 69999999999999998632 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 557 ADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
+|||.+......... .......||+.|+||| +..+..++.++||||+||++|+|++|+.||........... .....
T Consensus 158 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~~ 235 (311)
T 3ork_A 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-HVRED 235 (311)
T ss_dssp CCCSCC------------------CCTTCCHH-HHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHCC
T ss_pred eeccCcccccccccccccccccCcCcccCCHH-HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HhcCC
Confidence 999999876543221 1222355899999995 44567889999999999999999999999863211110000 00000
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH-HHHHHHHHHHhh
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI-VVHELQSIKSIL 710 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-vl~~L~~i~~~~ 710 (741)
... . .......+..+.+++.+||+.||++||++.+ +.+.+..+....
T Consensus 236 ~~~-~---------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 283 (311)
T 3ork_A 236 PIP-P---------------------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283 (311)
T ss_dssp CCC-H---------------------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTC
T ss_pred CCC-c---------------------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCC
Confidence 000 0 0001123466889999999999999996555 555666665443
No 102
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=353.00 Aligned_cols=250 Identities=22% Similarity=0.236 Sum_probs=183.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++.. ...+.+.+|+.++++++||||+++++++ ......++
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~l 125 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEISL 125 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSEEEE
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeEEE
Confidence 4588899999999999999999989999999999743 2345678899999999999999999995 45568999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC---CCceEE
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH---EMTAHV 556 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL 556 (741)
||||+++++|.+++... ..+++.++..++.|++.||.|||+. +|+||||||+||+++. ++.+||
T Consensus 126 v~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl 192 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK----------GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKI 192 (349)
T ss_dssp EECCCCSCBHHHHHTTC----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEE
T ss_pred EEEeCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEE
Confidence 99999999999998643 4588999999999999999999999 9999999999999975 789999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++....... .....||+.|+||| +..+..++.++|||||||++|||++|..||.........+........
T Consensus 193 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~ 268 (349)
T 2w4o_A 193 ADFGLSKIVEHQVL---MKTVCGTPGYCAPE-ILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268 (349)
T ss_dssp CCCC-------------------CGGGSCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC
T ss_pred ccCccccccCcccc---cccccCCCCccCHH-HhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC
Confidence 99999986644322 12356899999995 556678899999999999999999999998632211111111111000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. ..+ ...+.+..+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~-----~~~-----------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 269 YF-----ISP-----------------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CC-----CTT-----------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cc-----CCc-----------------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000 00123456789999999999999999999986
No 103
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1e-39 Score=344.38 Aligned_cols=253 Identities=19% Similarity=0.205 Sum_probs=201.0
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------cchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------ASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
+...|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 84 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY----- 84 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----
Confidence 456799999999999999999999999999999999753322 245688999999999999999999994
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
.+....++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~ 151 (321)
T 2a2a_A 85 ENRTDVVLILELVSGGELFDFLAQK----------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDK 151 (321)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTC----------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCT
T ss_pred ecCCEEEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecC
Confidence 4566899999999999999998643 4578899999999999999999999 99999999999999988
Q ss_pred C----ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 552 M----TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 552 ~----~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
+ .+||+|||.+......... ....||+.|+||| +..+..++.++||||+||++|+|++|..||......
T Consensus 152 ~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 224 (321)
T 2a2a_A 152 NIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--- 224 (321)
T ss_dssp TSSSCCEEECCCTTCEECCTTCCC---CCCCSCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---
T ss_pred CCCcCCEEEccCccceecCccccc---cccCCCCCccCcc-cccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---
Confidence 7 7999999999876554322 2345899999995 556678899999999999999999999998632110
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
..... +..... ... .......++.+.+++.+||+.||++|||+.|+++
T Consensus 225 --~~~~~--------i~~~~~--~~~--------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 --ETLAN--------ITSVSY--DFD--------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --HHHHH--------HHTTCC--CCC--------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --HHHHH--------HHhccc--ccC--------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01000 000000 000 0001123456889999999999999999999986
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.7e-40 Score=350.30 Aligned_cols=251 Identities=23% Similarity=0.270 Sum_probs=193.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++++.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|..+++++ +||||+++++++ .+..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~~ 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTES 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeCC
Confidence 4688899999999999999999999999999999754322 234567899999887 899999999994 5566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 150 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQ----------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIK 150 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEE
Confidence 899999999999999998632 4588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|+|||+++....... ......||+.|+|| |+..+..++.++||||+||++|||++|+.||.............
T Consensus 151 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---- 223 (345)
T 3a8x_A 151 LTDYGMCKEGLRPGD--TTSTFCGTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT---- 223 (345)
T ss_dssp ECCGGGCBCSCCTTC--CBCCCCSCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------C----
T ss_pred EEeccccccccCCCC--cccccCCCccccCc-cccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccccc----
Confidence 999999986433221 12235699999999 45566788999999999999999999999996322111000000
Q ss_pred CCcchh-HhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH
Q 037916 636 LPDHVM-DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM 696 (741)
Q Consensus 636 ~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 696 (741)
..... .+...... .+......+.+++.+||+.||++||++
T Consensus 224 -~~~~~~~i~~~~~~--------------------~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 224 -EDYLFQVILEKQIR--------------------IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -HHHHHHHHHHCCCC--------------------CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -HHHHHHHHHcCCCC--------------------CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 00000 01110000 011234567899999999999999996
No 105
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-39 Score=370.32 Aligned_cols=155 Identities=22% Similarity=0.254 Sum_probs=76.8
Q ss_pred CCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCcc
Q 037916 3 VGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLK 82 (741)
Q Consensus 3 l~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~ 82 (741)
++.|.++ .||..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..|.+|.++++ |+
T Consensus 12 ~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~----------L~ 77 (549)
T 2z81_A 12 GRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS----------LE 77 (549)
T ss_dssp CTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT----------CC
T ss_pred CCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc----------CC
Confidence 3444444 4554443 45555555555555555555555555555555555555544455555443 55
Q ss_pred EEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCccccCCCCccEEEccccc-ccccCCccccCCCcCcEEEcc
Q 037916 83 HLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAGIGKFINLQTLHMWDNQ-LSGTISPAIGELQNLVTLAIN 160 (741)
Q Consensus 83 ~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~ 160 (741)
+|+|++|++++..|..|..+. +|++|+|++|++.+. .|..|.++++|++|+|++|+ ++.+.+..|.++++|++|+|+
T Consensus 78 ~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 78 HLDLSDNHLSSLSSSWFGPLS-SLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp EEECTTSCCCSCCHHHHTTCT-TCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCccCccCHHHhccCC-CCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 555555555544444454444 555555555555432 23445555555555555554 333333444555555555555
Q ss_pred cCCCCCcCcccc
Q 037916 161 TNKLSGNIPPSI 172 (741)
Q Consensus 161 ~N~l~~~~~~~~ 172 (741)
+|++++..|..|
T Consensus 157 ~n~l~~~~~~~l 168 (549)
T 2z81_A 157 ALSLRNYQSQSL 168 (549)
T ss_dssp ETTCCEECTTTT
T ss_pred CCcccccChhhh
Confidence 555544444443
No 106
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.1e-41 Score=346.94 Aligned_cols=263 Identities=25% Similarity=0.357 Sum_probs=192.0
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
+....|++.++||+|+||.||+|++.. .||+|+++.... ...+.+.+|+.++++++||||+++++++ ..
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~~ 91 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------TA 91 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------CS
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------cC
Confidence 344568889999999999999998753 499999974332 2345678999999999999999999974 23
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~ 159 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS---------ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTV 159 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred CccEEEEEecCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCE
Confidence 4579999999999999998633 24588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCccccc--CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~--~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
||+|||.+................||+.|+|||.+. .+..++.++||||+||++|+|++|+.||....... ......
T Consensus 160 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~ 238 (289)
T 3og7_A 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV 238 (289)
T ss_dssp EECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH
T ss_pred EEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh
Confidence 999999998655432222233356899999996553 25678889999999999999999999986332111 111111
Q ss_pred hh-cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 633 RT-VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 633 ~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
.. ........ . ...+++.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 239 ~~~~~~~~~~~--------~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 239 GRGSLSPDLSK--------V-------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHTSCCCCTTS--------S-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cccccCcchhh--------c-------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11 11110000 0 01345678899999999999999999999999998764
No 107
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-40 Score=353.33 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=197.0
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
...|++.+.||+|+||.||+|+++.+++.||+|+++... ....+....|..+++.+ +||||++++++ +.+.
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~-----~~~~ 90 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT-----FQTK 90 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE-----EECS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEE-----EEeC
Confidence 357889999999999999999999999999999997432 23445677899999876 99999999999 4556
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 91 ~~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~v 157 (345)
T 1xjd_A 91 ENLFFVMEYLNGGDLMYHIQSC----------HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHI 157 (345)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCE
Confidence 6899999999999999998642 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+++........ .....||+.|+|| |+..+..++.++||||+||++|||++|..||..... ......
T Consensus 158 kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~ 229 (345)
T 1xjd_A 158 KIADFGMCKENMLGDAK--TNTFCGTPDYIAP-EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFHS 229 (345)
T ss_dssp EECCCTTCBCCCCTTCC--BCCCCSCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred EEeEChhhhhcccCCCc--ccCCCCCcccCCh-hhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Confidence 99999999864332221 2335699999999 555667789999999999999999999999863211 111100
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHH-HHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMT-IVV 700 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 700 (741)
+..... .. +......+.+++.+||..||++||++. |++
T Consensus 230 --------i~~~~~--~~------------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 230 --------IRMDNP--FY------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --------HHHCCC--CC------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --------HHhCCC--CC------------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 000000 00 001235678999999999999999997 654
No 108
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=346.15 Aligned_cols=245 Identities=23% Similarity=0.234 Sum_probs=198.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 80 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQQ 80 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSSE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCCE
Confidence 46888999999999999999999999999999997432 23455678899999999999999999994 55668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL 147 (318)
T 1fot_A 81 IFMIMDYIEGGELFSLLRKS----------QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKI 147 (318)
T ss_dssp EEEEECCCCSCBHHHHHHHT----------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEE
Confidence 99999999999999998643 4578899999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++...... ....||+.|+||| +..+..++.++||||+||++|||++|+.||..... ....
T Consensus 148 ~Dfg~a~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~---- 212 (318)
T 1fot_A 148 TDFGFAKYVPDVT-----YTLCGTPDYIAPE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTY---- 212 (318)
T ss_dssp CCCSSCEECSSCB-----CCCCSCTTTCCHH-HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH----
T ss_pred eecCcceecCCcc-----ccccCCccccCHh-HhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHH----
Confidence 9999998754321 2356999999995 55677899999999999999999999999863211 0000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 701 (741)
..+...... . +......+.+++.+||..||++|| +++|+++
T Consensus 213 ----~~i~~~~~~--~------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 213 ----EKILNAELR--F------------------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----HHHHHCCCC--C------------------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----HHHHhCCCC--C------------------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111111000 0 012235678999999999999999 8888874
No 109
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.9e-41 Score=349.75 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=198.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCC-------eEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGK-------TIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
..|++.+.||+|+||.||+|++..++ ..||+|+++.......+.+.+|+.++++++||||+++++++ .
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 82 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC-----V 82 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-----C
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----E
Confidence 45788899999999999999997655 57999999765556667889999999999999999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
.+...++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 150 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKN---------KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREE 150 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHT---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCC
Confidence 455789999999999999999743 23488999999999999999999999 999999999999998887
Q ss_pred c--------eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccC
Q 037916 553 T--------AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEG 624 (741)
Q Consensus 553 ~--------~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~ 624 (741)
. +||+|||.+...... ....||+.|+|||.+.....++.++||||+||++|||++|..|+......
T Consensus 151 ~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~ 224 (289)
T 4fvq_A 151 DRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS 224 (289)
T ss_dssp BGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred cccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch
Confidence 6 999999998754332 12347889999966554477899999999999999999965543211111
Q ss_pred CcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHH
Q 037916 625 NMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704 (741)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 704 (741)
.. ....... ..... ...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 225 ~~-~~~~~~~------------~~~~~--------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 225 QR-KLQFYED------------RHQLP--------------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HH-HHHHHHT------------TCCCC--------------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HH-HHHHhhc------------cCCCC--------------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 00 0000000 00000 011234679999999999999999999999999
Q ss_pred HHHHhh
Q 037916 705 SIKSIL 710 (741)
Q Consensus 705 ~i~~~~ 710 (741)
++....
T Consensus 272 ~l~~p~ 277 (289)
T 4fvq_A 272 SLFTPD 277 (289)
T ss_dssp TCC---
T ss_pred HhcCCC
Confidence 887533
No 110
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.3e-40 Score=337.93 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=202.4
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
+..+|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|+.++++++||||+++++++ .+....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeE
Confidence 457899999999999999999999999999999999866556677889999999999999999999995 456689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CCCCce
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTA 554 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 554 (741)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 82 ~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~ 148 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK----------RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPL 148 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeccCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcE
Confidence 9999999999999988632 4588999999999999999999999 99999999999999 778899
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+......... ....||+.|+|||.+ . +.++.++||||+|+++|+|++|+.||....... ........
T Consensus 149 ~l~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~ 222 (277)
T 3f3z_A 149 KLIDFGLAARFKPGKMM---RTKVGTPYYVSPQVL-E-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREG 222 (277)
T ss_dssp EECCCTTCEECCTTSCB---CCCCSCTTTCCHHHH-T-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC
T ss_pred EEEecccceeccCccch---hccCCCCCccChHHh-c-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhC
Confidence 99999999876544322 224589999999654 3 348999999999999999999999986321110 00000000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
...... ......++.+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 223 TFTFPE----------------------------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CCCCCH----------------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCCc----------------------------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 000123467889999999999999999999986
No 111
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.6e-40 Score=362.69 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=199.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
+.|.+.+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++ .....
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~~ 90 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPSD 90 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCE
Confidence 46888999999999999999999999999999997432 23345788999999999999999999995 45568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL 157 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKN----------GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKI 157 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSS----------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEE
Confidence 99999999999999998643 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||++......... ....||+.|+|||.+......+.++||||+||++|+|++|+.||.... ......
T Consensus 158 ~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~--- 226 (476)
T 2y94_A 158 ADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFK--- 226 (476)
T ss_dssp CCCSSCEECCTTCCB---CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHH---
T ss_pred Eeccchhhccccccc---cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHH---
Confidence 999999876554322 234699999999655444455789999999999999999999986321 111111
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+.+.... . +....+.+.+++.+||+.||++|||+.|+++
T Consensus 227 -----~i~~~~~~-~-------------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 227 -----KICDGIFY-T-------------------PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -----HHHTTCCC-C-------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----HHhcCCcC-C-------------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11110000 0 0012346789999999999999999999986
No 112
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-40 Score=345.79 Aligned_cols=272 Identities=21% Similarity=0.249 Sum_probs=194.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
+|++++.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ......+
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRLV 76 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCEE
T ss_pred cchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeEE
Confidence 478889999999999999999 478999999996432 22346788999999999999999999995 4556899
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+++ +|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~~-~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 143 (288)
T 1ob3_A 77 LVFEHLDQ-DLKKLLDVC---------EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIAD 143 (288)
T ss_dssp EEEECCSE-EHHHHHHTS---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCC-CHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeE
Confidence 99999964 999888643 24578889999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||......+ .+..........
T Consensus 144 fg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 220 (288)
T 1ob3_A 144 FGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTP 220 (288)
T ss_dssp TTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred CccccccCccccc--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCC
Confidence 9999876433211 1224589999999766555678999999999999999999999986432111 111111110000
Q ss_pred c---hhHhhh-hcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 639 H---VMDIVD-STLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 639 ~---~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. .....+ +......... .............+.+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 221 NSKNWPNVTELPKYDPNFTVY-------EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTTSTTGGGSTTCCTTCCCC-------CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Chhhchhhhcccccccccccc-------cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 000000 0000000000 000000001123456789999999999999999999875
No 113
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.7e-40 Score=362.63 Aligned_cols=282 Identities=20% Similarity=0.166 Sum_probs=195.7
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc--CcCcchhHHHHHHHHHhcCCCceeeEeeeecCcc-ccCCc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIRHKNLVKILTVCSGVD-YKGDD 475 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~~~ 475 (741)
..+|++++.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++.... .++..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 35789999999999999999999999999999999743 2233566789999999999999999999975432 13345
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+++ ++.+.+. ..+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCC-CHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEE
Confidence 78999999965 5666664 2378889999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|+|||+|+....... .....||+.|+||| +..+..++.++||||+||++|||++|+.||...... ..+.......
T Consensus 205 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE-~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~l 279 (464)
T 3ttj_A 205 ILDFGLARTAGTSFM---MTPYVVTRYYRAPE-VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQL 279 (464)
T ss_dssp ECCCCCC-----CCC---C----CCCTTCCHH-HHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EEEEEeeeecCCCcc---cCCCcccccccCHH-HHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc
Confidence 999999987654322 22356999999995 556678999999999999999999999998632111 1111111111
Q ss_pred CC----------cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 636 LP----------DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 636 ~~----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. .....+++..............................+.+.+++.+||+.||++|||+.|+++
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0011111110000000000000000000000111233567899999999999999999999986
No 114
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-40 Score=358.82 Aligned_cols=282 Identities=17% Similarity=0.159 Sum_probs=199.6
Q ss_pred HHHHHhhhcccC--ceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMG--SFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G--~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.+|++.+.||+| +||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++|||||++++++ ....
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~ 99 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IADN 99 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETT
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE-----EECC
Confidence 468899999999 999999999999999999999975332 2345677899999999999999999995 4566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~k 168 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTH--------FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVY 168 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHT--------CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEccCCCCHHHHHhhh--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 899999999999999998643 124488999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCc-----ccccccccccccccCcccccCC-CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchh
Q 037916 556 VADFGLAKLLPPAHL-----QTSSIGVKGTIGYIAPAEYGLG-SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629 (741)
Q Consensus 556 L~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPEe~~~~-~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~ 629 (741)
|+|||.+........ ........||+.|+|||.+... ..++.++||||+||++|||++|+.||..........
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~- 247 (389)
T 3gni_B 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL- 247 (389)
T ss_dssp ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-
T ss_pred EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-
Confidence 999998865432211 1111224689999999665443 578999999999999999999999996432221111
Q ss_pred hhhhhcCCcchhHhhhhcccCC---------------cch---hhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCC
Q 037916 630 NFARTVLPDHVMDIVDSTLLAD---------------DED---LTITSNQRQRQARINNIMECLISVVRIGVACSMESPQ 691 (741)
Q Consensus 630 ~~~~~~~~~~~~~~~d~~l~~~---------------~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 691 (741)
.......+ .+.+...... ..+ .....................+.+.+++.+||+.||+
T Consensus 248 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 323 (389)
T 3gni_B 248 EKLNGTVP----CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPD 323 (389)
T ss_dssp HC------------------------------------------------------------CCHHHHHHHHHHTCSCTT
T ss_pred HHhcCCCC----ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcc
Confidence 11110000 0000000000 000 0000000000011112234456789999999999999
Q ss_pred CCCCHHHHHHH
Q 037916 692 DRMNMTIVVHE 702 (741)
Q Consensus 692 ~RPs~~evl~~ 702 (741)
+|||+.|+++-
T Consensus 324 ~Rpta~ell~h 334 (389)
T 3gni_B 324 ARPSASTLLNH 334 (389)
T ss_dssp TSCCHHHHTTS
T ss_pred cCCCHHHHhcC
Confidence 99999999854
No 115
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.2e-40 Score=357.42 Aligned_cols=255 Identities=20% Similarity=0.235 Sum_probs=191.6
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--------cCcchhHHHHHHHHHhcCCCceeeEeeeecC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--------HGASKSSIAECSALRNIRHKNLVKILTVCSG 468 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 468 (741)
.+...|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-- 209 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-- 209 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE--
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence 34567999999999999999999999999999999997432 11234578999999999999999999985
Q ss_pred ccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe
Q 037916 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548 (741)
Q Consensus 469 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll 548 (741)
. ....|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 210 ---~-~~~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll 272 (419)
T 3i6u_A 210 ---D-AEDYYIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLL 272 (419)
T ss_dssp ---E-SSEEEEEEECCTTCBGGGGTSSS----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred ---e-cCceEEEEEcCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEE
Confidence 2 23579999999999999988643 4588999999999999999999999 99999999999999
Q ss_pred CCCC---ceEEeecccccccCCCCcccccccccccccccCcccccC--CCCCCCccCchhHHHHHHHHHcCCCCCCcccc
Q 037916 549 DHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFE 623 (741)
Q Consensus 549 ~~~~---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~--~~~~~~~~DIwSlG~il~elltg~~p~~~~~~ 623 (741)
+.++ .+||+|||+++........ ....||+.|+|||.+.. ...++.++||||+||++|+|++|..||.....
T Consensus 273 ~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 273 SSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ecCCCcceEEEeecccceecCCCccc---cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 7544 5999999999876543222 23569999999965532 46788999999999999999999999863221
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. ..+.............+ .....++.+.+++.+||+.||++|||+.|+++
T Consensus 350 ~-~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 350 Q-VSLKDQITSGKYNFIPE---------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp S-CCHHHHHHTTCCCCCHH---------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h-HHHHHHHhcCCCCCCch---------------------------hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1 11111111110000000 01123466889999999999999999999886
No 116
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-40 Score=347.85 Aligned_cols=273 Identities=24% Similarity=0.321 Sum_probs=203.2
Q ss_pred HHHHhhhcccCceeeEEEEE----EcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 401 SFLFLCWIDMGSFGSVYKGI----LDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.|++.+.||+|+||.||+|+ +..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. .+..
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 98 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGN 98 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------C
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCCc
Confidence 36778899999999999999 46689999999997433 2334678899999999999999999999642 2235
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~k 166 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKN---------KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 166 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHH---------TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEEeCCCCcHHHHHHhc---------cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEE
Confidence 689999999999999998532 24588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+......... .......||..|+||| ...+..++.++||||+||++|+|++|..|+...... .......
T Consensus 167 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~ 242 (302)
T 4e5w_A 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPE-CLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGP 242 (302)
T ss_dssp ECCCTTCEECCTTCCEEECCCCTTCCGGGCCHH-HHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCS
T ss_pred ECcccccccccCCCcceeccCCCCCCccccCCe-eecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCC
Confidence 9999999877654321 2223355888999995 445667889999999999999999999986422110 0000000
Q ss_pred cCCcc-hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 635 VLPDH-VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 635 ~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
..... ........... .....+..+++.+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 243 THGQMTVTRLVNTLKEG---------------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCGGGHHHHHHHHHHTT---------------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHhcc---------------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00000 01111100000 000111234567889999999999999999999999999875
No 117
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.3e-40 Score=346.10 Aligned_cols=272 Identities=23% Similarity=0.364 Sum_probs=195.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..|.+.+.||+|+||.||+|.+.. ++..||+|+++.... ...+.+.+|+.++++++||||+++++++........
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 457788899999999999998864 566899999874322 234567899999999999999999999754432233
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++++|.+++...... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLE----TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBT----TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred cccEEEEecccCCCHHHHHHHhhhh----cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 4579999999999999998432110 1235689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
||+|||.+................+++.|+||| ...+..++.++|||||||++|+|++ |..||...... .......
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~ 263 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE-SLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYLL 263 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHH-HHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCch-hhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHH
Confidence 999999998765443323333345788999995 4556778999999999999999999 88898632111 1111100
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
....... +..+++.+.+++.+||+.||++|||+.|+++.|+++.+..+
T Consensus 264 -----------~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 264 -----------HGHRLKQ-------------------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp -----------TTCCCCC-------------------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -----------cCCCCCC-------------------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0000000 01334568899999999999999999999999999987654
No 118
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.2e-40 Score=340.59 Aligned_cols=269 Identities=18% Similarity=0.190 Sum_probs=207.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.+|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+.+++.++|++++..+.++ .......++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~~~~l 82 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWC----GAEGDYNVM 82 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESC--SSCCHHHHHHHHHHHHTTSTTCCCEEEE----EEETTEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC--cchhHHHHHHHHHHHhhcCCCCCccccc----cCCCCceEE
Confidence 4688999999999999999999889999999998743 3346788999999999998877666665 345668899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC---CCCceEE
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD---HEMTAHV 556 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~---~~~~~kL 556 (741)
||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||
T Consensus 83 v~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl 149 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFC---------SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYI 149 (296)
T ss_dssp EEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEE
T ss_pred EEEec-CCCHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEE
Confidence 99999 89999998632 24588999999999999999999999 999999999999994 7889999
Q ss_pred eecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 557 ADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+|||.+......... .......||+.|+|| |...+..++.++|||||||++|+|++|+.||......... ..
T Consensus 150 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~ 226 (296)
T 3uzp_A 150 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI-NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QK 226 (296)
T ss_dssp CCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH-HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SH
T ss_pred eeCCCcccccccccccccccccccccccccccCCh-hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh--hh
Confidence 999999876544321 112335699999999 5556777899999999999999999999999743211100 00
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
...+........ .......+++.+.+++.+||+.||++|||+.||++.|+.+.+...
T Consensus 227 --------~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 227 --------YERISEKKMSTP---------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --------HHHHHHHHHHSC---------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --------hhhhcccccCCc---------------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 000000000000 000011335678899999999999999999999999999998766
Q ss_pred CC
Q 037916 712 GP 713 (741)
Q Consensus 712 ~~ 713 (741)
.+
T Consensus 284 ~~ 285 (296)
T 3uzp_A 284 FS 285 (296)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 119
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=351.30 Aligned_cols=272 Identities=21% Similarity=0.284 Sum_probs=202.9
Q ss_pred HHHHHhhhcccCceeeEEEEEE-----cCCCeEEEEEEeecc-CcCcchhHHHHHHHHHhc-CCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGIL-----DEGKTIIAVKVLNLL-HHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 472 (741)
..|.+.+.||+|+||.||+|++ ..++..||+|+++.. .....+.+.+|+.+++++ +||||+++++++ .
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~ 119 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC-----T 119 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----e
Confidence 3577888999999999999997 346778999999743 233456788999999999 899999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCc-------------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceec
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADK-------------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHC 539 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHr 539 (741)
.....++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+. ||+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 45578999999999999999975422100 001123478999999999999999999999 99999
Q ss_pred CCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCC
Q 037916 540 DLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPS 618 (741)
Q Consensus 540 Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~ 618 (741)
||||+||+++.++.+||+|||.+................||+.|+||| ...+..++.++|||||||++|+|++ |..||
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE-SLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHH-HhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998665443333333355788999995 4456678999999999999999998 99998
Q ss_pred CccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH
Q 037916 619 DIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI 698 (741)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 698 (741)
...... ..+...... ...... +..+++.+.+++.+||+.||++|||+.|
T Consensus 276 ~~~~~~-~~~~~~~~~------------~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ 324 (344)
T 1rjb_A 276 PGIPVD-ANFYKLIQN------------GFKMDQ------------------PFYATEEIYIIMQSCWAFDSRKRPSFPN 324 (344)
T ss_dssp TTCCCS-HHHHHHHHT------------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred ccCCcH-HHHHHHHhc------------CCCCCC------------------CCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 633111 111111111 100000 0123456889999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 037916 699 VVHELQSIKSILL 711 (741)
Q Consensus 699 vl~~L~~i~~~~~ 711 (741)
+++.|+.+.....
T Consensus 325 l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 325 LTSFLGCQLADAE 337 (344)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876554
No 120
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.9e-40 Score=346.35 Aligned_cols=272 Identities=21% Similarity=0.291 Sum_probs=208.3
Q ss_pred HHHHHhhhcccCceeeEEEEEE-----cCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGIL-----DEGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 472 (741)
.+|++.+.||+|+||.||+|++ ..+++.||+|+++.... ...+.+.+|+.+++++ +||||+++++++ .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~ 97 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC-----T 97 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE-----e
Confidence 3577888999999999999985 45788999999974332 2346788999999999 999999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCc--------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADK--------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
.+...++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 45578999999999999999875421100 001123589999999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCcccc
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFE 623 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~ 623 (741)
||+++.++.+||+|||.+................+|+.|+||| ...+..++.++||||+||++|+|++ |..||.....
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChH-HhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 9999999999999999998776554333333355788999995 4456678999999999999999999 9999863221
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 703 (741)
.. ... ..+........ ...++..+.+++.+||+.||++|||+.|+++.|
T Consensus 254 ~~-~~~------------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 254 DS-KFY------------KMIKEGFRMLS------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp SH-HHH------------HHHHHTCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hh-HHH------------HHhccCCCCCC------------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 11 111 11111100000 012345688999999999999999999999999
Q ss_pred HHHHHhhc
Q 037916 704 QSIKSILL 711 (741)
Q Consensus 704 ~~i~~~~~ 711 (741)
+++.+...
T Consensus 303 ~~~~~~~~ 310 (313)
T 1t46_A 303 EKQISEST 310 (313)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99887654
No 121
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2e-39 Score=342.35 Aligned_cols=255 Identities=20% Similarity=0.227 Sum_probs=196.4
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--------CcchhHHHHHHHHHhcCCCceeeEeeeecC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--------GASKSSIAECSALRNIRHKNLVKILTVCSG 468 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 468 (741)
.+...|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.++++++||||+++++++.
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~- 85 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 85 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc-
Confidence 456789999999999999999999999999999999864221 22345789999999999999999999852
Q ss_pred ccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe
Q 037916 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548 (741)
Q Consensus 469 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll 548 (741)
.+ ..|+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 86 ----~~-~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~ 147 (322)
T 2ycf_A 86 ----AE-DYYIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLL 147 (322)
T ss_dssp ----SS-SEEEEEECCTTEETHHHHSTT----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ----CC-ceEEEEecCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEE
Confidence 22 379999999999999988643 4588999999999999999999999 99999999999999
Q ss_pred CCCC---ceEEeecccccccCCCCcccccccccccccccCccccc--CCCCCCCccCchhHHHHHHHHHcCCCCCCcccc
Q 037916 549 DHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMFE 623 (741)
Q Consensus 549 ~~~~---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~--~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~ 623 (741)
+.++ .+||+|||.+......... ....||+.|+|||.+. ....++.++||||+||++|+|++|..||.....
T Consensus 148 ~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 148 SSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp SSSSSSCCEEECCCTTCEECCCCHHH---HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred ecCCCCCeEEEccCccceeccccccc---ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 8765 4999999999876543221 2245899999996552 356789999999999999999999999863221
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. .+............. ......++.+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~-~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 225 QV-SLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SS-CHHHHHHHTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HH-HHHHHHHhCccccCc---------------------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11 111111110000000 001123467889999999999999999999984
No 122
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=351.70 Aligned_cols=259 Identities=24% Similarity=0.344 Sum_probs=194.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEE----EEEEeecc-CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTII----AVKVLNLL-HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
..|++++.||+|+||.||+|++..+++.| |+|.++.. .....+.+.+|+.++++++||||++++++|. ..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~ 89 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-----TS 89 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE-----SS
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe-----cC
Confidence 46888999999999999999998777655 66666432 2334567889999999999999999999963 22
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
..++||||+.+|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 90 -~~~~v~~~~~~g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 156 (327)
T 3lzb_A 90 -TVQLITQLMPFGCLLDYVREH---------KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp -SEEEEECCCSSCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred -CceEEEEecCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCE
Confidence 378999999999999998643 24588899999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
||+|||.++...............+|+.|+||| ...+..++.++||||+||++|||++ |..||...... .+.....
T Consensus 157 kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~ 233 (327)
T 3lzb_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 233 (327)
T ss_dssp EECCTTC----------------CCCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEccCcceeEccCccccccccCCCccccccCHH-HHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH
Confidence 999999998765543333333345788999995 4456778999999999999999999 99998632111 1111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
. ...... +..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 234 ~------------~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 234 K------------GERLPQ------------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp T------------TCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred c------------CCCCCC------------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1 000000 012345688999999999999999999999999999853
No 123
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.3e-39 Score=376.65 Aligned_cols=343 Identities=15% Similarity=0.200 Sum_probs=293.5
Q ss_pred CCCCCcccc-----------------cCChhh-hhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCc-Ccc-cC
Q 037916 2 DVGVNRVQG-----------------GIPLDF-GFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNN-LTG-EV 61 (741)
Q Consensus 2 dl~~n~~~~-----------------~ip~~~-~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~ 61 (741)
||++|++.+ .||..+ |..+++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+
T Consensus 454 ~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~i 533 (876)
T 4ecn_A 454 YFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQL 533 (876)
T ss_dssp EEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHH
T ss_pred ECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccc
Confidence 578888887 499887 3479999999999999999999999999999999999998 998 78
Q ss_pred CchhhhhhhhhhccccCCCccEEECcCCcCcccCCc--hhhcccccccEEEccCCcccccCCccccCCCCccEEEccccc
Q 037916 62 PSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPG--CICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQ 139 (741)
Q Consensus 62 ~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~--~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 139 (741)
|..|+.++. ...+.++|++|+|++|+|+ .+|. .+..++ +|+.|+|++|++. .+| .|..+++|++|+|++|+
T Consensus 534 P~~i~~L~~---~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~-~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~ 606 (876)
T 4ecn_A 534 KADWTRLAD---DEDTGPKIQIFYMGYNNLE-EFPASASLQKMV-KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQ 606 (876)
T ss_dssp HHHHHHHHH---CTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT-TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSC
T ss_pred hHHHHhhhh---cccccCCccEEEeeCCcCC-ccCChhhhhcCC-CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCc
Confidence 998888761 1112235999999999999 7777 899998 9999999999997 677 99999999999999999
Q ss_pred ccccCCccccCCCc-CcEEEcccCCCCCcCcccccCCcc--cceeeccCcccccccCccc---c--cCCCCCEEeccCcc
Q 037916 140 LSGTISPAIGELQN-LVTLAINTNKLSGNIPPSIGNLKK--LLQLYLIENFLQVSIPSSL---G--QCQSLTTINLSYNN 211 (741)
Q Consensus 140 i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N~i~~~~~~~~---~--~l~~L~~L~L~~N~ 211 (741)
|+ .+|..|.++++ |++|+|++|+|+ .+|..|..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+
T Consensus 607 l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~ 684 (876)
T 4ecn_A 607 IE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNE 684 (876)
T ss_dssp CS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSC
T ss_pred cc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCc
Confidence 99 67788999999 999999999999 67888887755 9999999999998766433 2 34589999999999
Q ss_pred ccccCCcccc-ccccceeEEEcCCCccCCCCChhhcCC-------CCCcEEEeccccccchhhhhcc--ccccccEEEeC
Q 037916 212 LSGTIPPQLM-DLTSLSVGLDLSRNQLVGSLPTEVGKL-------INLEILFISRNMLECEILSTLG--SCIKLEQLKLG 281 (741)
Q Consensus 212 l~~~~p~~~~-~l~~L~~~L~Ls~N~l~~~~p~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~ 281 (741)
|+ .+|..+. .+++|+. |+|++|+|....+..+... ++|+.|+|++|+|+. .|..+. .+++|+.|+|+
T Consensus 685 L~-~lp~~~~~~l~~L~~-L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~-lp~~l~~~~l~~L~~L~Ls 761 (876)
T 4ecn_A 685 IQ-KFPTELFATGSPIST-IILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVS 761 (876)
T ss_dssp CC-SCCHHHHHTTCCCSE-EECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCC-CCGGGSTTTCTTCCEEECC
T ss_pred CC-ccCHHHHccCCCCCE-EECCCCcCCccChHHhccccccccccCCccEEECCCCCCcc-chHHhhhccCCCcCEEEeC
Confidence 99 6776655 8899998 9999999994444444332 399999999999995 556665 99999999999
Q ss_pred CCccCCCCChhcccCccCCeeeCCC------CcCCCccchhhhccccCCcccccCcccccccCCccccCCcccccccCCC
Q 037916 282 GNLFQGPIPLSLSSLRGLRVLDLSQ------NNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNS 355 (741)
Q Consensus 282 ~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 355 (741)
+|+|++ +|..+.++++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++.. +|.. .++.++.+++.+|+
T Consensus 762 ~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~-Ip~~-l~~~L~~LdLs~N~ 838 (876)
T 4ecn_A 762 YNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-VDEK-LTPQLYILDIADNP 838 (876)
T ss_dssp SSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB-CCSC-CCSSSCEEECCSCT
T ss_pred CCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCc-cCHh-hcCCCCEEECCCCC
Confidence 999997 788899999999999977 88888999999999999999999999954 4443 34789999999998
Q ss_pred Cccc
Q 037916 356 KLCG 359 (741)
Q Consensus 356 ~~c~ 359 (741)
+..-
T Consensus 839 l~~i 842 (876)
T 4ecn_A 839 NISI 842 (876)
T ss_dssp TCEE
T ss_pred CCcc
Confidence 7543
No 124
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.2e-40 Score=360.46 Aligned_cols=253 Identities=26% Similarity=0.333 Sum_probs=201.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++.||||+++.. ...+.+.+|+.++++++||||+++++++. ......|+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~~i 264 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 264 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSC--TTSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTSCEEE
T ss_pred HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCc--hHHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCCceEE
Confidence 45778899999999999999986 779999999743 35678899999999999999999999963 33447899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 265 v~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~Df 333 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG--------RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDF 333 (450)
T ss_dssp EEECCTTCBHHHHHHHHC--------TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeC
Confidence 999999999999997431 13368889999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|+++....... ...+++.|+||| ...+..++.++|||||||++|||++ |+.||...... .....+..
T Consensus 334 G~a~~~~~~~~-----~~~~~~~y~aPE-~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~---- 401 (450)
T 1k9a_A 334 GLTKEASSTQD-----TGKLPVKWTAPE-ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEK---- 401 (450)
T ss_dssp TTCEECC-----------CCCTTTSCHH-HHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHT----
T ss_pred CCccccccccc-----CCCCCcceeCHH-HhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc----
Confidence 99985533211 124688999995 5556789999999999999999998 99998632111 11111110
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
.... ..+..+++.+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 402 --------~~~~------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 --------GYKM------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --------TCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --------CCCC------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0000 01123456788999999999999999999999999998754
No 125
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.8e-40 Score=350.76 Aligned_cols=249 Identities=22% Similarity=0.271 Sum_probs=197.1
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
...|++++.||+|+||.||+|++..+++.||+|+++.. .....+.+..|..+++.+ +||+|++++++ +.+.
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~-----~~~~ 93 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQTM 93 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEE-----EECS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEE-----EEcC
Confidence 35688999999999999999999989999999999743 223456678899999887 89999999999 4566
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||++||+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 94 ~~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~v 160 (353)
T 2i0e_A 94 DRLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHI 160 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcE
Confidence 7899999999999999998633 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+++....... ......||+.|+||| +..+..++.++||||+||++|||++|+.||..... .....
T Consensus 161 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~- 231 (353)
T 2i0e_A 161 KIADFGMCKENIWDGV--TTKTFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ- 231 (353)
T ss_dssp EECCCTTCBCCCCTTC--CBCCCCSCGGGCCHH-HHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEEeCCcccccccCCc--ccccccCCccccChh-hhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHHH-
Confidence 9999999986433221 122356999999994 55677889999999999999999999999863211 11111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH-----HHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM-----TIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 701 (741)
.+...... . +......+.+++.+||..||++||++ .|+++
T Consensus 232 -------~i~~~~~~--~------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 232 -------SIMEHNVA--Y------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -------HHHHCCCC--C------------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -------HHHhCCCC--C------------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11110000 0 01234567899999999999999964 66654
No 126
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.7e-40 Score=355.09 Aligned_cols=286 Identities=18% Similarity=0.226 Sum_probs=205.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
.+|++++.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...........|
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 46889999999999999999999999999999997432 22336678999999999999999999998655444556789
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+. ++|.+++.. ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 107 iv~e~~~-~~L~~~l~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 171 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT-----------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICD 171 (364)
T ss_dssp EEEECCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred EEEcccC-cCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEe
Confidence 9999995 599998852 3488999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCccc-ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 559 FGLAKLLPPAHLQT-SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 559 Fg~a~~~~~~~~~~-~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
||.+.......... ......||+.|+|||.+..+..++.++||||+||++|+|++|+.||......+ .+.........
T Consensus 172 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~ 250 (364)
T 3qyz_A 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGS 250 (364)
T ss_dssp CTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCS
T ss_pred CcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCC
Confidence 99998765432221 12335699999999766666778999999999999999999999986322111 11111111111
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.. .+...................................+.+++.+||+.||++|||+.|+++-
T Consensus 251 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 251 PS-QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CC-HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC-HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 10 00000000000000000000000000001112334678899999999999999999999863
No 127
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-40 Score=349.86 Aligned_cols=273 Identities=20% Similarity=0.317 Sum_probs=206.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-------CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-------EGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVD 470 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 470 (741)
..|++.+.||+|+||.||+|++. .++..||+|+++.... ...+.+.+|+.+++++ +||||+++++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---- 110 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC---- 110 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE----
Confidence 45788899999999999999985 3577899999974322 2345678999999999 899999999995
Q ss_pred ccCCceEEEEEecccCCChhhhccCCCCCCcc------cCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKT------VEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 471 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
......++||||+++|+|.+++......... ......+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 111 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 186 (334)
T 2pvf_A 111 -TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186 (334)
T ss_dssp -CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred -ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccc
Confidence 4455789999999999999999754321100 01123588999999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCcccc
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFE 623 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~ 623 (741)
||+++.++.+||+|||.+................+|+.|+|||. ..+..++.++||||+||++|+|++ |..||.....
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHH-HHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHH-hcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 99999999999999999987765443333333457889999954 456678999999999999999999 9999863211
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 703 (741)
..... .+....... .+..++..+.+++.+||+.||++|||+.|+++.|
T Consensus 266 -----~~~~~---------~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 266 -----EELFK---------LLKEGHRMD------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp -----HHHHH---------HHHHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -----HHHHH---------HHhcCCCCC------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11110 000000000 0113345688999999999999999999999999
Q ss_pred HHHHHhhcCC
Q 037916 704 QSIKSILLGP 713 (741)
Q Consensus 704 ~~i~~~~~~~ 713 (741)
+++.......
T Consensus 314 ~~l~~~~~~~ 323 (334)
T 2pvf_A 314 DRILTLTTNE 323 (334)
T ss_dssp HHHHHHHC--
T ss_pred HHHHhccccC
Confidence 9999876644
No 128
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5e-40 Score=349.81 Aligned_cols=245 Identities=20% Similarity=0.203 Sum_probs=197.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||++++++ +.+...
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~~ 115 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS-----FKDNSN 115 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEcCCE
Confidence 46788899999999999999999999999999997432 2345677889999999999999999999 455668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL 182 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQV 182 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEcCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEE
Confidence 99999999999999998643 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++...... ....||+.|+||| +..+..++.++||||+||++|||++|..||..... .....
T Consensus 183 ~DFg~a~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~--- 248 (350)
T 1rdq_E 183 TDFGFAKRVKGRT-----WTLCGTPEALAPE-IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYE--- 248 (350)
T ss_dssp CCCTTCEECSSCB-----CCCEECGGGCCHH-HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred cccccceeccCCc-----ccccCCccccCHH-HhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHH---
Confidence 9999998764321 2356999999995 55567889999999999999999999999863211 11110
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCC-----HHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMN-----MTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 701 (741)
.+...... . +......+.+++.+||+.||++||+ +.||++
T Consensus 249 -----~i~~~~~~--~------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 249 -----KIVSGKVR--F------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----HHHHCCCC--C------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHcCCCC--C------------------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 01110000 0 0123456789999999999999998 777764
No 129
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=349.10 Aligned_cols=270 Identities=19% Similarity=0.251 Sum_probs=205.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++||||+++++++.... ......++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~l 107 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAWL 107 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeEE
Confidence 46889999999999999999998899999999987655555677889999999999999999999874211 23457899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~df 178 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKD------KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDL 178 (317)
T ss_dssp EEECCTTCBHHHHHHHHHT------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEeCCCCcHHHHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEec
Confidence 9999999999999864211 125588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCccc-------ccccccccccccCcccccCCC--CCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 560 GLAKLLPPAHLQT-------SSIGVKGTIGYIAPAEYGLGS--EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 560 g~a~~~~~~~~~~-------~~~~~~gt~~y~aPEe~~~~~--~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
|.+.......... ......||+.|+|||.+.... .++.++|||||||++|+|++|+.||............
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 258 (317)
T 2buj_A 179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258 (317)
T ss_dssp SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH
T ss_pred CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH
Confidence 9987654221100 011234799999996553322 3689999999999999999999998643222222211
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
....... ... ....+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 259 ~~~~~~~-----------~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 259 AVQNQLS-----------IPQ-------------------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHHCC-------------CCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred HhhccCC-----------CCc-------------------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1111000 000 012345688999999999999999999999999887643
No 130
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.9e-40 Score=341.28 Aligned_cols=261 Identities=24% Similarity=0.379 Sum_probs=208.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+..++..||+|+++.. ....+.+.+|+.++++++||||+++++++ .+....++
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~~ 86 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYI 86 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEEE
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCEEE
Confidence 3577888999999999999999989999999999742 33456788999999999999999999995 45567899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 87 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 155 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLREC--------NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 155 (288)
T ss_dssp EEECCTTEEHHHHHHHC--------CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEEcCCCCcHHHHHHhc--------ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccC
Confidence 99999999999998643 124588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+........ .......+|+.|+||| ...+..++.++||||+|+++|+|++ |..||...... ...
T Consensus 156 g~~~~~~~~~~-~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~--------- 222 (288)
T 3kfa_A 156 GLSRLMTGDTY-TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY--------- 222 (288)
T ss_dssp CGGGTSCSSSS-EEETTEEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHH---------
T ss_pred ccceeccCCcc-ccccCCccccCcCChh-hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---------
Confidence 99987654432 2223345788999995 4456678999999999999999999 99998632111 111
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
+.+........ +..+++.+.+++.+||..||++|||+.|+++.|+.+.+...
T Consensus 223 ---~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 223 ---ELLEKDYRMER------------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ---HHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHhccCCCCC------------------CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11111100000 01334668899999999999999999999999999887654
No 131
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-40 Score=350.47 Aligned_cols=280 Identities=23% Similarity=0.301 Sum_probs=208.3
Q ss_pred HHHH-HHhhhcccCceeeEEEEEE----cCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 399 FVSF-LFLCWIDMGSFGSVYKGIL----DEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 399 ~~~y-~~~~~ig~G~~g~V~~a~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
..+| +++++||+|+||.||+|.+ ..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++.. .
T Consensus 29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~ 105 (318)
T 3lxp_A 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---A 105 (318)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---T
T ss_pred cHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---C
Confidence 3455 8899999999999988865 35789999999974322 234567899999999999999999999742 2
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
+....++||||+++++|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~-----------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~ 171 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH-----------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDR 171 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred CCceEEEEEecccCCcHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCC
Confidence 356789999999999999998632 378899999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
.+||+|||.+......... .......+|+.|+||| +..+..++.++||||+||++|+|++|..||............+
T Consensus 172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~ 250 (318)
T 3lxp_A 172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250 (318)
T ss_dssp CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHH-HHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred CEEECCccccccccccccccccccCCCCCceeeChH-HhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcc
Confidence 9999999999877654321 1222345788999995 4556678899999999999999999999986332111000000
Q ss_pred hhhcCC-cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 632 ARTVLP-DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 632 ~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
...... ....+.++.... ......++..+.+++.+||+.||++|||+.|+++.|+.+.+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 251 AQGQMTVLRLTELLERGER------------------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCHHHHHHHHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHhcccC------------------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 000000 001111111110 0111234567899999999999999999999999999999888
Q ss_pred cCCc
Q 037916 711 LGPK 714 (741)
Q Consensus 711 ~~~~ 714 (741)
..++
T Consensus 313 ~~~~ 316 (318)
T 3lxp_A 313 QGQA 316 (318)
T ss_dssp HC--
T ss_pred ccCC
Confidence 7554
No 132
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=351.13 Aligned_cols=271 Identities=18% Similarity=0.196 Sum_probs=197.3
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccCcC-----------cchhHHHHHHHHHhcCCCceeeEeee
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLHHG-----------ASKSSIAECSALRNIRHKNLVKILTV 465 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~hpnIv~~~~~ 465 (741)
..|++.+.||+|+||.||+|++.. ++..||+|+....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 357888999999999999999986 7889999998743221 12345678888899999999999999
Q ss_pred ecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCC
Q 037916 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545 (741)
Q Consensus 466 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~N 545 (741)
+... +.+....|+||||+ +++|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+|
T Consensus 117 ~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 181 (345)
T 2v62_A 117 GLTE-FKGRSYRFMVMERL-GIDLQKISGQN----------GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAAN 181 (345)
T ss_dssp EEEE-SSSCEEEEEEEECE-EEEHHHHCBGG----------GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred cccc-cCCCcEEEEEEecc-CCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHH
Confidence 7432 13366899999999 99999999743 3689999999999999999999999 99999999999
Q ss_pred eEeCCCC--ceEEeecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCC
Q 037916 546 VLLDHEM--TAHVADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618 (741)
Q Consensus 546 Ill~~~~--~~kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~ 618 (741)
|+++.++ .+||+|||+++........ .......||+.|+||| +..+..++.++|||||||++|||++|+.||
T Consensus 182 Ill~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 182 LLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD-AHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp EEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHH-HHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred EEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHH-HhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9998877 9999999999876533211 1113356999999995 555678899999999999999999999998
Q ss_pred CccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH
Q 037916 619 DIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI 698 (741)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 698 (741)
.................... ....+.... ....+++.+.+++.+||+.||++|||+.|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 318 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDE-LPQSVLKWA---------------------PSGSSCCEIAQFLVCAHSLAYDEKPNYQA 318 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHT-TTHHHHHHS---------------------CTTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred cccccccHHHHHHHHhhccc-ccHHHHhhc---------------------cccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence 63211111111111100000 000000000 00034567899999999999999999999
Q ss_pred HHHHHHHHHH
Q 037916 699 VVHELQSIKS 708 (741)
Q Consensus 699 vl~~L~~i~~ 708 (741)
|++.|+++.-
T Consensus 319 l~~~L~~~~~ 328 (345)
T 2v62_A 319 LKKILNPHGI 328 (345)
T ss_dssp HHHHHCTTCC
T ss_pred HHHHHhccCC
Confidence 9999987654
No 133
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.2e-39 Score=345.32 Aligned_cols=277 Identities=19% Similarity=0.218 Sum_probs=201.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++. ...+.+.+|+.++++++ ||||+++++++.. ......+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCceE
Confidence 468889999999999999999998999999999863 34567889999999997 9999999999642 2256789
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC-ceEEe
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM-TAHVA 557 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL~ 557 (741)
+||||+.+++|.+++. .+++..+..++.|++.||+|||+. ||+||||||+||+++.++ .+||+
T Consensus 110 lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~ 173 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLI 173 (330)
T ss_dssp EEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred EEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEE
Confidence 9999999999999874 378888999999999999999999 999999999999999776 89999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||.+......... ....||+.|+|||.+.....++.++||||+||++|+|++|+.||.........+.........
T Consensus 174 Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~ 250 (330)
T 3nsz_A 174 DWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250 (330)
T ss_dssp CCTTCEECCTTCCC---CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCH
T ss_pred eCCCceEcCCCCcc---ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCC
Confidence 99999876544322 224589999999766555789999999999999999999999985332221222221111111
Q ss_pred cchhHhhhhcccCCcchhhhhh-----hhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITS-----NQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....+.++.............. ................+.+.+++.+||++||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111111100000000000 000000000001123567889999999999999999999986
No 134
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.1e-40 Score=346.85 Aligned_cols=258 Identities=21% Similarity=0.252 Sum_probs=183.0
Q ss_pred HHHHHHHh---hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccC
Q 037916 398 LFVSFLFL---CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 398 ~~~~y~~~---~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 473 (741)
++..|.+. +.||+|+||.||+|.+..+++.||+|+++. .......+|+.+++.+. ||||+++++++ .+
T Consensus 6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~ 77 (325)
T 3kn6_A 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVF-----HD 77 (325)
T ss_dssp HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEE-----Ec
Confidence 34567665 679999999999999999999999999963 23467788999999996 99999999994 55
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC-
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM- 552 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~- 552 (741)
+...|+||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 144 (325)
T 3kn6_A 78 QLHTFLVMELLNGGELFERIKKK----------KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDEND 144 (325)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHC----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC---
T ss_pred CCEEEEEEEccCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCC
Confidence 66899999999999999998643 4589999999999999999999999 999999999999997765
Q ss_pred --ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 553 --TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 553 --~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
.+||+|||++......... .....||+.|+|| |+..+..++.++||||+||++|+|++|+.||.........
T Consensus 145 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP-E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--- 218 (325)
T 3kn6_A 145 NLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAP-ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC--- 218 (325)
T ss_dssp -CEEEECCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C---
T ss_pred cccEEEeccccceecCCCCCc--ccccCCCcCccCH-HHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc---
Confidence 8999999999866543222 2234589999999 5556778999999999999999999999999743221100
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....+..+....+.... .........+.+.+++.+||+.||++|||+.|+++
T Consensus 219 -------~~~~~~~~~i~~~~~~~------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 219 -------TSAVEIMKKIKKGDFSF------------EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -------CCHHHHHHHHTTTCCCC------------CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -------ccHHHHHHHHHcCCCCC------------CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00111111111111100 00011234567889999999999999999999874
No 135
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=350.37 Aligned_cols=247 Identities=20% Similarity=0.228 Sum_probs=191.7
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEEEecc
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFM 484 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv~e~~ 484 (741)
.+.||+|+||.||+|.+..+++.||+|+++.......+.+.+|+.++++++||||+++++++ ......++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence 46799999999999999989999999999865444567788999999999999999999995 4556899999999
Q ss_pred cCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe--CCCCceEEeecccc
Q 037916 485 HNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL--DHEMTAHVADFGLA 562 (741)
Q Consensus 485 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll--~~~~~~kL~DFg~a 562 (741)
++++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 169 ~~~~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIIDE---------SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHHT---------GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 999999988532 24588999999999999999999999 99999999999999 56789999999999
Q ss_pred cccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhH
Q 037916 563 KLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMD 642 (741)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (741)
.......... ...||+.|+||| +..+..++.++|||||||++|||++|..||...... ..+.........
T Consensus 237 ~~~~~~~~~~---~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~----- 306 (373)
T 2x4f_A 237 RRYKPREKLK---VNFGTPEFLAPE-VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD----- 306 (373)
T ss_dssp EECCTTCBCC---CCCSSCTTCCHH-HHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC-----
T ss_pred eecCCccccc---cccCCCcEeChh-hccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC-----
Confidence 8775443222 245899999995 556778899999999999999999999998632111 011111111000
Q ss_pred hhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 643 IVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 643 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... ......+.+.+++.+||+.||++|||+.|+++
T Consensus 307 -------~~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 307 -------LEDE----------------EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -------SCSG----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -------CChh----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 01123456889999999999999999999987
No 136
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-38 Score=367.61 Aligned_cols=347 Identities=21% Similarity=0.207 Sum_probs=245.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|||+|+|+ .||+..|.++++|++|||++|+|+++.+++|.++++|++|+|++|+|++..+..|.++++ |
T Consensus 58 dLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~----------L 126 (635)
T 4g8a_A 58 DLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSS----------L 126 (635)
T ss_dssp ECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTT----------C
T ss_pred EeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCC----------C
Confidence 56666666 333332336677777777777776666666666777777777777766555566666655 6
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCccccCCCCccEEEcccccccccCCccccCCCc-------
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAGIGKFINLQTLHMWDNQLSGTISPAIGELQN------- 153 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~------- 153 (741)
++|+|++|+|+++.+..|.+++ +|++|+|++|++... .|..+..+++|++|+|++|+|+++.+..|..+.+
T Consensus 127 ~~L~Ls~N~l~~l~~~~~~~L~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~ 205 (635)
T 4g8a_A 127 QKLVAVETNLASLENFPIGHLK-TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 205 (635)
T ss_dssp CEEECTTSCCCCSTTCCCTTCT-TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCE
T ss_pred CEEECCCCcCCCCChhhhhcCc-ccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhh
Confidence 7777777776666666666666 677777777666543 4556666666777776666666554443322211
Q ss_pred --------------------------------------------------------------------------------
Q 037916 154 -------------------------------------------------------------------------------- 153 (741)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (741)
T Consensus 206 ~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 285 (635)
T 4g8a_A 206 LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 285 (635)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEE
T ss_pred hhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhh
Confidence
Q ss_pred --------------------------------------------CcEEEcccCCCCCcCcc-------------------
Q 037916 154 --------------------------------------------LVTLAINTNKLSGNIPP------------------- 170 (741)
Q Consensus 154 --------------------------------------------L~~L~L~~N~l~~~~~~------------------- 170 (741)
|+.|++.+|.+....+.
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 286 FRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp EEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBC
T ss_pred hhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCc
Confidence 11222222222111110
Q ss_pred cccCCcccceeeccCcccccc--cC-----------------------cccccCCCCCEEeccCccccccCC-ccccccc
Q 037916 171 SIGNLKKLLQLYLIENFLQVS--IP-----------------------SSLGQCQSLTTINLSYNNLSGTIP-PQLMDLT 224 (741)
Q Consensus 171 ~~~~l~~L~~L~L~~N~i~~~--~~-----------------------~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 224 (741)
.+..+++|+.|++++|.+... .+ ..+..+++|+.+++++|++....+ ..|..+.
T Consensus 366 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~ 445 (635)
T 4g8a_A 366 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 445 (635)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCT
T ss_pred ccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccc
Confidence 112345677777777776432 22 334455666666666666554433 4567788
Q ss_pred cceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccc-cchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeee
Q 037916 225 SLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNML-ECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLD 303 (741)
Q Consensus 225 ~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 303 (741)
++.. ++++.|.+.+..+..+..++.|+.|+|++|.+ ..+.+..|..+++|++|+|++|+|+++.|.+|.++++|++|+
T Consensus 446 ~l~~-l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 446 NLIY-LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TCCE-EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccc-ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 8887 99999999988999999999999999999975 456788999999999999999999999999999999999999
Q ss_pred CCCCcCCCccchhhhccccCCcccccCcccccccCCc-ccc-CCcccccccCCCCccccC
Q 037916 304 LSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE-GVF-KNASAISVFGNSKLCGGI 361 (741)
Q Consensus 304 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~~~ 361 (741)
|++|+|++..|..|..+++|+.|+|++|+|++.+|.. ..+ ..++.+++.+|||.|.+-
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999999999999999998875 233 578999999999999753
No 137
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.3e-40 Score=338.58 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=175.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
+.|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+...
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCe
Confidence 46889999999999999999999999999999997432 22345778999999999999999999995 45568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+ ++++.+++... ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl 153 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQR----------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTS----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred EEEEehhc-CCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEE
Confidence 89999999 77888887543 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+......... ....||+.|+|||.+......+.++||||+||++|+|++|+.||..... .....
T Consensus 154 ~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~--- 222 (275)
T 2eue_A 154 ADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFK--- 222 (275)
T ss_dssp CCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH---
T ss_pred eecccceeccCcccc---cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHH---
Confidence 999999866543322 2245899999996554444457899999999999999999999863211 00000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+..... .. +....+.+.+++.+||+.||++|||+.|+++
T Consensus 223 -----~~~~~~~-~~-------------------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 223 -----NISNGVY-TL-------------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHTCC-CC-------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHhCCC-CC-------------------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0000000 00 0123456789999999999999999999975
No 138
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-40 Score=353.72 Aligned_cols=264 Identities=25% Similarity=0.389 Sum_probs=194.1
Q ss_pred HHHhhhcccCceeeEEEEEEcCC---CeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEG---KTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
|.+.+.||+|+||.||+|++..+ +..||+|.++... ....+.+.+|+.++++++||||++++++| ...+...
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~----~~~~~~~ 166 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGSP 166 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE----CCCSSCC
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE----EcCCCCe
Confidence 45677899999999999997532 3568999986432 23356788999999999999999999986 3445578
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 167 ~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~ 234 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE---------THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVA 234 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT---------TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred EEEEECCCCCCHHHHHhhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEe
Confidence 9999999999999999643 23477888999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCccc--ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 558 DFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 558 DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
|||+++......... ......+|+.|+||| ...+..++.++|||||||++|||++ |.+||...... ........
T Consensus 235 DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~ 311 (373)
T 3c1x_A 235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQ 311 (373)
T ss_dssp CC---------------------CCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHT
T ss_pred eccccccccccccccccccCCCCCcccccChH-HhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHc
Confidence 999998664432211 122345788999995 4456778999999999999999999 67777532111 11111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCCc
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGPK 714 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 714 (741)
... ... +..++..+.+++.+||+.||++|||+.|+++.|+.+...+....
T Consensus 312 ~~~-----------~~~-------------------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 312 GRR-----------LLQ-------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp TCC-----------CCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred CCC-----------CCC-------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 000 000 01234568899999999999999999999999999998777544
No 139
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=355.56 Aligned_cols=283 Identities=18% Similarity=0.233 Sum_probs=209.8
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
+|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. ......++
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~~l 86 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCEEE
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCeeEE
Confidence 5788899999999999999999999999999997433 2334667899999999999999999998642 23447899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe----CCCCceE
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL----DHEMTAH 555 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~k 555 (741)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 87 v~e~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 156 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYK 156 (396)
T ss_dssp EECCCTTEEHHHHTTSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEE
T ss_pred EEecCCCCCHHHHHHhhh-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEE
Confidence 999999999999997431 123389999999999999999999999 99999999999999 7778899
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccC-------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL-------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~-------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
|+|||.++........ ....||+.|+|||.+.. ...++.++|||||||++|||++|+.||..........
T Consensus 157 L~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 233 (396)
T 4eut_A 157 LTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233 (396)
T ss_dssp ECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH
T ss_pred EecCCCceEccCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH
Confidence 9999999876554322 23569999999965432 1467889999999999999999999986432222211
Q ss_pred hhhhhh--cCCcc-hhHh---hhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 629 HNFART--VLPDH-VMDI---VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 629 ~~~~~~--~~~~~-~~~~---~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
..+... ..+.. .... .+........ ..............+.+++.+||++||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 234 EVMYKIITGKPSGAISGVQKAENGPIDWSGD----------MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp HHHHHHHHSCCTTCCEEEECSTTCCEEEESS----------CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred HHHHHHhcCCCcccchhheeccCCCcccCcc----------CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 111111 11110 0000 0000000000 000001124567788999999999999999999999999
Q ss_pred HHHHHHh
Q 037916 703 LQSIKSI 709 (741)
Q Consensus 703 L~~i~~~ 709 (741)
++++.+.
T Consensus 304 l~~il~~ 310 (396)
T 4eut_A 304 TSDILHR 310 (396)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 9998863
No 140
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.8e-40 Score=340.78 Aligned_cols=259 Identities=20% Similarity=0.278 Sum_probs=192.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.+|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. ++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~ 88 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------EN 88 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------SS
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------cC
Confidence 468888999999999999999864 35679999986432 223456789999999999999999999852 34
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 156 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVR---------KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 156 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHT---------TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEE
T ss_pred ccEEEEecCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEE
Confidence 578999999999999998633 23588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+.......... .....+|+.|+||| ...+..++.++||||+||++|||++ |..||...... .....+
T Consensus 157 l~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i-- 230 (281)
T 1mp8_A 157 LGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI-- 230 (281)
T ss_dssp ECC--------------------CCGGGCCHH-HHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH--
T ss_pred ECccccccccCcccccc-cccCCCcccccChh-hcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH--
Confidence 99999998765433221 12234678999995 4456678999999999999999996 99998632211 111000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
....... .+..+++.+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 231 ---------~~~~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 231 ---------ENGERLP-------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ---------HTTCCCC-------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------HcCCCCC-------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000000 01133567889999999999999999999999999998654
No 141
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=338.51 Aligned_cols=266 Identities=24% Similarity=0.340 Sum_probs=202.5
Q ss_pred HHHhhhcccCceeeEEEEEEcCCC---eEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGK---TIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
|.+.+.||+|+||.||+|.+..++ ..||+|+++.... ...+.+.+|+.++++++||||+++++++. ..+...
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~ 98 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEGLP 98 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSSCC
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCCCc
Confidence 344578999999999999975443 3799999874322 23467789999999999999999999963 233445
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+.+++|.+++... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 99 ~~v~e~~~~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~ 166 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP---------QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVA 166 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT---------TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecccCCCHHHHHhcc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeC
Confidence 8999999999999998642 24578889999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCc--ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 558 DFGLAKLLPPAHL--QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 558 DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|||.+........ ........+|+.|+|| |...+..++.++||||+||++|+|++|..|+..... ...........
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~ 244 (298)
T 3pls_A 167 DFGLARDILDREYYSVQQHRHARLPVKWTAL-ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQG 244 (298)
T ss_dssp CTTSSCTTTTGGGGCSCCSSCTTCGGGGSCH-HHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTT
T ss_pred cCCCcccccCCcccccccCcCCCCCccccCh-hhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcC
Confidence 9999986654321 1122334588999999 555677889999999999999999996665431111 11111111110
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCCcc
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGPKT 715 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 715 (741)
... .. ...+++.+.+++.+||+.||++|||+.|+++.|+++.+.+.....
T Consensus 245 ~~~------------~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 245 RRL------------PQ------------------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp CCC------------CC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred CCC------------CC------------------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 000 00 012345688999999999999999999999999999988775543
No 142
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=348.70 Aligned_cols=287 Identities=23% Similarity=0.301 Sum_probs=202.3
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHH--HHhcCCCceeeEeeeecCccccCCce
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSA--LRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
...|++.+.||+|+||.||+|++ +++.||+|+++.. ....+..|..+ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35688899999999999999987 5899999999743 23344444444 45589999999998665444555667
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC------CCCceecCCCCCCeEeCC
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC------QPTTAHCDLKPSNVLLDH 550 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------~~~ivHrDlkp~NIll~~ 550 (741)
.++||||+++|+|.+++... ..++..+..++.|++.||+|||+.+ .++|+||||||+||+++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhhc-----------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 89999999999999998632 3478889999999999999999763 338999999999999999
Q ss_pred CCceEEeecccccccCCCCc------ccccccccccccccCcccccCC------CCCCCccCchhHHHHHHHHHcCCCCC
Q 037916 551 EMTAHVADFGLAKLLPPAHL------QTSSIGVKGTIGYIAPAEYGLG------SEVSINGDVYSYGILLLELMTRKRPS 618 (741)
Q Consensus 551 ~~~~kL~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPEe~~~~------~~~~~~~DIwSlG~il~elltg~~p~ 618 (741)
++.+||+|||++........ ........||+.|+|||.+... ..++.++|||||||++|||++|..||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 99999999999987654321 1112234699999999654332 45678899999999999999998776
Q ss_pred CccccCCcchhhhhhhcC-CcchhH---hhh-hcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCC
Q 037916 619 DIMFEGNMNLHNFARTVL-PDHVMD---IVD-STLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693 (741)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~-~~~~~~---~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 693 (741)
............+..... .....+ ... ........ ........+++.+.+++.+||+.||++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFP------------EAWKENSLAVRSLKETIEDCWDQDAEAR 303 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC------------TTCCCCSHHHHHHHHHHHHHSCSSGGGS
T ss_pred CCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCC------------cccccccchHHHHHHHHHHHhcCChhhC
Confidence 432211111111111111 111111 000 00000000 0001112456679999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCC
Q 037916 694 MNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 694 Ps~~evl~~L~~i~~~~~~~ 713 (741)
||+.|+++.|+++...+..-
T Consensus 304 ps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 304 LTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp CCHHHHHHHHHHHHHCCCC-
T ss_pred cchHHHHHHHHHHHHHHHhc
Confidence 99999999999999777633
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.8e-40 Score=341.12 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=200.2
Q ss_pred HHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.|++.+.||+|+||.||+|++.. ....||+|.++... ....+.+.+|+.++++++||||++++++| +..+..
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----~~~~~~ 101 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGS 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE----CCSSSC
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE----EcCCCc
Confidence 46778899999999999999753 33468999986422 22346678999999999999999999986 344567
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl 169 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE---------THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKV 169 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT---------TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEE
T ss_pred eEEEEeCCCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEE
Confidence 89999999999999999643 24578889999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcc--cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 557 ADFGLAKLLPPAHLQ--TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~--~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
+|||.+......... .......+|+.|+||| ...+..++.++||||+||++|+|++ |.+||...... .......
T Consensus 170 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~ 246 (298)
T 3f66_A 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL 246 (298)
T ss_dssp CSCGGGCCCSCGGGCBC-----CCBCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHH
T ss_pred CcccccccccccchhccccccCCCCCccccChH-HhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHh
Confidence 999999876544321 1223345788999995 4456678999999999999999999 55555422111 1111110
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCC
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
... .... +..++..+.+++.+||+.||++|||+.|+++.|+++...+...
T Consensus 247 ~~~-----------~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 247 QGR-----------RLLQ-------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TTC-----------CCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred cCC-----------CCCC-------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 000 0000 0122456889999999999999999999999999998876543
No 144
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-39 Score=342.08 Aligned_cols=287 Identities=23% Similarity=0.291 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc--CCCceeeEeeeecCccc
Q 037916 394 VGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTVCSGVDY 471 (741)
Q Consensus 394 ~~~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpnIv~~~~~~~~~~~ 471 (741)
.+..+...|++.+.||+|+||.||+|++. ++.||+|++... .......|.+++... +||||+++++++....
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~- 104 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT- 104 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-
Confidence 34566789999999999999999999986 899999998632 234455566666554 9999999999864321
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCe
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC-----QPTTAHCDLKPSNV 546 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivHrDlkp~NI 546 (741)
......++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.. .++|+||||||+||
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni 173 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-----------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-----------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence 122578999999999999999853 34889999999999999999999752 34899999999999
Q ss_pred EeCCCCceEEeecccccccCCCCccc--ccccccccccccCcccccCCCCCCCc------cCchhHHHHHHHHHcCCCCC
Q 037916 547 LLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGLGSEVSIN------GDVYSYGILLLELMTRKRPS 618 (741)
Q Consensus 547 ll~~~~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~~~~~~~~------~DIwSlG~il~elltg~~p~ 618 (741)
+++.++.+||+|||.+.......... ......||+.|+|||.+ .+..++.+ +|||||||++|||++|..|+
T Consensus 174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~ 252 (337)
T 3mdy_A 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL-DESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252 (337)
T ss_dssp EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHH-TTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhc-ccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence 99999999999999997665432221 11234699999999544 44444444 99999999999999995554
Q ss_pred CccccCCcchhhhhhhcCCc-chhHhhh-hcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH
Q 037916 619 DIMFEGNMNLHNFARTVLPD-HVMDIVD-STLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM 696 (741)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~-~~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 696 (741)
.........+.......... ....... ........ ......++++.+.+++.+||+.||++|||+
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~ 319 (337)
T 3mdy_A 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP-------------NRWSSDECLRQMGKLMTECWAHNPASRLTA 319 (337)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC-------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred cccccccccHhhhcCCCCchhhhHHHHhhhccCcccc-------------ccchhhHHHHHHHHHHHHhhhhChhhCCCH
Confidence 32211111111110000000 0001000 00000000 000122677889999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 037916 697 TIVVHELQSIKSILL 711 (741)
Q Consensus 697 ~evl~~L~~i~~~~~ 711 (741)
.||++.|+.+.+...
T Consensus 320 ~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 320 LRVKKTLAKMSESQD 334 (337)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999987653
No 145
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.4e-39 Score=342.82 Aligned_cols=276 Identities=22% Similarity=0.290 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHh--cCCCceeeEeeeecCccc
Q 037916 394 VGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN--IRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 394 ~~~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~~~~~~~~~~~ 471 (741)
.+..+...|++.+.||+|+||.||+|++. ++.||+|+++. .....+.+|.++++. ++||||+++++++....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~- 109 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDN- 109 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-
Confidence 45667789999999999999999999984 89999999863 234567788888887 79999999999964321
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH--------HDCQPTTAHCDLKP 543 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDlkp 543 (741)
......++||||+++|+|.+++.. ..+++.+++.++.|++.||+||| +. +|+||||||
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp 175 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKS 175 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSG
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCH
Confidence 112378999999999999999863 34789999999999999999999 77 999999999
Q ss_pred CCeEeCCCCceEEeecccccccCCCCccc--ccccccccccccCcccccCCC-----CCCCccCchhHHHHHHHHHcC--
Q 037916 544 SNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGLGS-----EVSINGDVYSYGILLLELMTR-- 614 (741)
Q Consensus 544 ~NIll~~~~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~~~-----~~~~~~DIwSlG~il~elltg-- 614 (741)
+||+++.++.+||+|||.+.......... ......||+.|+|||.+.... .++.++|||||||++|||++|
T Consensus 176 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~ 255 (342)
T 1b6c_B 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 255 (342)
T ss_dssp GGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccC
Confidence 99999999999999999997765433211 123346999999996554332 234789999999999999999
Q ss_pred --------CCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhccc
Q 037916 615 --------KRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACS 686 (741)
Q Consensus 615 --------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 686 (741)
..||............+...... ......... .....+++..+.+++.+||
T Consensus 256 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 256 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE--------QKLRPNIPN-------------RWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--------SCCCCCCCG-------------GGGTSHHHHHHHHHHHHHC
T ss_pred cCCcccccccCccccCcCcccHHHHHHHHHH--------HHhCCCCcc-------------cccchhHHHHHHHHHHHHh
Confidence 56665332222222222211111 011111000 0011256778999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 687 MESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 687 ~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
+.||++|||+.||++.|+++.+..
T Consensus 315 ~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 315 YANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccChhhCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999998654
No 146
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-39 Score=355.60 Aligned_cols=257 Identities=19% Similarity=0.177 Sum_probs=199.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|++..+++.||+|+++.. .......+.+|..+++.++||||++++++| .+...
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-----~~~~~ 148 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-----QDDNN 148 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-----ECSSE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeCCE
Confidence 3577888999999999999999999999999999742 223345688999999999999999999994 55668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~~---------~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL 216 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSKF---------EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRL 216 (437)
T ss_dssp EEEEECCCTTCBHHHHHHTT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHHc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEE
Confidence 99999999999999999742 24588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCccccc----CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG----LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~----~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
+|||+|+......... .....||+.|+|||.+. ....++.++||||+||++|||++|+.||......+ .+....
T Consensus 217 ~DFGla~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~ 294 (437)
T 4aw2_A 217 ADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIM 294 (437)
T ss_dssp CCCTTCEECCTTSCEE-CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHH
T ss_pred cchhhhhhcccCCCcc-cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhh
Confidence 9999998765443222 22356999999996554 25678999999999999999999999986321100 011110
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCC--CCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQD--RMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 702 (741)
.. . ..+ ..+.. .....+.+.+++.+||..+|++ ||+++|+++-
T Consensus 295 ~~----~-~~~----~~p~~------------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NH----K-ERF----QFPTQ------------------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp TH----H-HHC----CCCSS------------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hc----c-ccc----cCCcc------------------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 0 000 00000 0013456789999999988888 9999999863
No 147
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.1e-40 Score=366.61 Aligned_cols=257 Identities=24% Similarity=0.394 Sum_probs=205.2
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|++.++||+|+||.||+|.+..++..||||+++... ...+.+.+|+.++++++||||++++++|. .....++|
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~-----~~~~~~lv 294 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFYII 294 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCEEE
T ss_pred HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCCcEEEE
Confidence 4677889999999999999999889999999997532 34577899999999999999999999963 44578999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg 560 (741)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 295 ~E~~~~g~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 363 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECN--------RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFG 363 (495)
T ss_dssp EECCTTCBHHHHHHHSC--------TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTT
T ss_pred EEccCCCCHHHHHHhcC--------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecc
Confidence 99999999999996431 24578889999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCcc
Q 037916 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPDH 639 (741)
Q Consensus 561 ~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (741)
+++....... .......+++.|+||| +..+..++.++|||||||++|||++ |..||...... ...
T Consensus 364 ~a~~~~~~~~-~~~~~~~~~~~y~aPE-~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~---------- 429 (495)
T 1opk_A 364 LSRLMTGDTY-TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY---------- 429 (495)
T ss_dssp CEECCTTCCE-ECCTTCCCCGGGCCHH-HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHH----------
T ss_pred cceeccCCce-eecCCCcCCcceeCHh-HHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHH----------
Confidence 9987654322 2222344678999995 4456678999999999999999999 99998632111 111
Q ss_pred hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 640 VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 640 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
+.+....... .+..+++.+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 430 --~~~~~~~~~~------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 430 --ELLEKDYRME------------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp --HHHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred --HHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1111111000 012345678899999999999999999999999988753
No 148
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.1e-40 Score=345.34 Aligned_cols=273 Identities=20% Similarity=0.242 Sum_probs=206.9
Q ss_pred HHHHHhhhcccCceeeEEEEEE-----cCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGIL-----DEGKTIIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 472 (741)
.+|++.+.||+|+||.||+|.+ ..+++.||+|+++.... ...+.+.+|+.+++++ +||||+++++++. .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~----~ 102 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----K 102 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----C
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe----c
Confidence 5688899999999999999985 35678999999974322 2345678999999999 7999999999963 3
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcc------cCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKT------VEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NI 546 (741)
.+...++||||+++++|.+++......... ......+++..++.++.|++.||.|||+. +|+||||||+||
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Ni 179 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 179 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceE
Confidence 345689999999999999999754221000 00112378899999999999999999999 999999999999
Q ss_pred EeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCC
Q 037916 547 LLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGN 625 (741)
Q Consensus 547 ll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~ 625 (741)
+++.++.+||+|||.+................||+.|+||| +..+..++.++||||+||++|+|++ |..||.......
T Consensus 180 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~ 258 (316)
T 2xir_A 180 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258 (316)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred EECCCCCEEECCCccccccccCccceeccCCCcceeecCch-hhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH
Confidence 99999999999999998765443333333455788999995 4456778999999999999999998 999986322111
Q ss_pred cchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHH
Q 037916 626 MNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQS 705 (741)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 705 (741)
.+......... ... +..+++.+.+++.+||+.||++|||+.|+++.|+.
T Consensus 259 -~~~~~~~~~~~------------~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 307 (316)
T 2xir_A 259 -EFCRRLKEGTR------------MRA------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307 (316)
T ss_dssp -HHHHHHHHTCC------------CCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHHHhccCcc------------CCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11101100000 000 01224568899999999999999999999999999
Q ss_pred HHHhhc
Q 037916 706 IKSILL 711 (741)
Q Consensus 706 i~~~~~ 711 (741)
+.+...
T Consensus 308 ~~~~~~ 313 (316)
T 2xir_A 308 LLQANA 313 (316)
T ss_dssp HHHHHC
T ss_pred HHhhhc
Confidence 986543
No 149
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=378.78 Aligned_cols=334 Identities=20% Similarity=0.204 Sum_probs=295.2
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCccc-CCchhhhhhhhhhccccCCC
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGE-VPSEFGKATKAYCVQNCNQH 80 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~~~~~~~~~~~ 80 (741)
|.++++++ .||. +. ++|++|||++|+|+++.+..|.++++|++|+|++|.+.+. .|.+|.++++
T Consensus 10 dcs~~~L~-~vP~-lp---~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~---------- 74 (844)
T 3j0a_A 10 FYRFCNLT-QVPQ-VL---NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPN---------- 74 (844)
T ss_dssp EESCCCSS-CCCS-SC---TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTT----------
T ss_pred EccCCCCC-CCCC-CC---CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCC----------
Confidence 45667777 7887 44 8999999999999999999999999999999999965544 4888999886
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCcc--ccCCCCccEEEcccccccccCC-ccccCCCcCcEE
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG--IGKFINLQTLHMWDNQLSGTIS-PAIGELQNLVTL 157 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~--~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L 157 (741)
|++|+|++|+|++..|..|..+. +|++|+|++|++.+..|.. |.++++|++|+|++|.+++..+ ..|.++++|++|
T Consensus 75 L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 75 LRILDLGSSKIYFLHPDAFQGLF-HLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp CCEEECTTCCCCEECTTSSCSCS-SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred CCEEECCCCcCcccCHhHccCCc-ccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEE
Confidence 99999999999999999999998 9999999999998766655 9999999999999999998765 579999999999
Q ss_pred EcccCCCCCcCcccccCC--cccceeeccCcccccccCcccccCCC------CCEEeccCccccccCCcccccc------
Q 037916 158 AINTNKLSGNIPPSIGNL--KKLLQLYLIENFLQVSIPSSLGQCQS------LTTINLSYNNLSGTIPPQLMDL------ 223 (741)
Q Consensus 158 ~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~l------ 223 (741)
+|++|++++..+..|..+ ++|+.|+|++|.+.+..|..+..+++ |+.|+|++|++++..|..+...
T Consensus 154 ~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l 233 (844)
T 3j0a_A 154 DFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQA 233 (844)
T ss_dssp EEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCB
T ss_pred ECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccc
Confidence 999999999999999888 89999999999999888887776665 9999999998887666555432
Q ss_pred --------------------------------ccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccc
Q 037916 224 --------------------------------TSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGS 271 (741)
Q Consensus 224 --------------------------------~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 271 (741)
++++. |+|++|.+.+..|..|..+++|+.|+|++|+++++.+..|.+
T Consensus 234 ~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 312 (844)
T 3j0a_A 234 FSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRH-LDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG 312 (844)
T ss_dssp SEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCE-EECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTT
T ss_pred cceecccccccccccccccCCCChhhhhccccCCccE-EECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcC
Confidence 56777 999999999888999999999999999999999999999999
Q ss_pred cccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCccccCCcccccc
Q 037916 272 CIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISV 351 (741)
Q Consensus 272 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 351 (741)
+++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+++... ++.+..+.+
T Consensus 313 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l 388 (844)
T 3j0a_A 313 LDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFL 388 (844)
T ss_dssp CSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEE
T ss_pred CCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhcc
Confidence 9999999999999998889999999999999999999998888889999999999999999987543 566777777
Q ss_pred cCCCC
Q 037916 352 FGNSK 356 (741)
Q Consensus 352 ~~n~~ 356 (741)
.+|..
T Consensus 389 ~~N~l 393 (844)
T 3j0a_A 389 SGNKL 393 (844)
T ss_dssp ESCCC
T ss_pred CCCCc
Confidence 77754
No 150
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-39 Score=337.88 Aligned_cols=255 Identities=24% Similarity=0.286 Sum_probs=194.5
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
+...|.+.++||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++ .+...
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 94 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHN 94 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCe
Confidence 4567999999999999999999999999999999997543 23456788999999999999999999995 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CCCCc
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMT 553 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~~~~ 553 (741)
.++||||+++++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~ 165 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQ------ARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSP 165 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHH------HHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHhhh------hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCC
Confidence 999999999999999885321 1124588999999999999999999999 99999999999999 44578
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+||+|||.+........ .....||+.|+|||.+ ...++.++||||+||++|+|++|+.||...... .......
T Consensus 166 ~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~--~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~ 238 (285)
T 3is5_A 166 IKIIDFGLAELFKSDEH---STNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKAT 238 (285)
T ss_dssp EEECCCCCCCC-------------CTTGGGCCHHHH--TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred EEEEeeecceecCCccc---CcCcccccCcCChHHh--ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhc
Confidence 99999999976554322 2234589999999654 356889999999999999999999998632111 0000000
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
...+. ..... ....+.+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~---------~~~~~-------------------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 239 YKEPN---------YAVEC-------------------RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HCCCC---------CCC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCcc---------ccccc-------------------CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 00000 012356779999999999999999999985
No 151
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.4e-40 Score=344.81 Aligned_cols=271 Identities=18% Similarity=0.253 Sum_probs=197.8
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+..|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++ ...
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~ 104 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IED 104 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 3457899999999999999999998899999999997432 22345678999999999999999999995 345
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++++|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~ 175 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHFKK------QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVV 175 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHHHH------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CcEEEEEecCCCCCHHHHHHHhcc------cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCE
Confidence 589999999999999999863210 124578899999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+......... .....|++.|+||| +..+..++.++||||||+++|+|++|..||..... ........
T Consensus 176 kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE-~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~ 249 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKK 249 (310)
T ss_dssp EECCC--------------------CCSSCCHH-HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHH
T ss_pred EEEeccceeeecCCCcc--ccccCCCeeEeChH-HhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHH
Confidence 99999998765443221 12245899999995 55567789999999999999999999999863211 11111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCCc
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGPK 714 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 714 (741)
.... ...... ....++.+.+++.+||+.||++|||+.||++.|+++....+.|.
T Consensus 250 ~~~~--------~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 250 IEQC--------DYPPLP------------------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp HHTT--------CSCCCC------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred hhcc--------cCCCCc------------------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000 000000 01234568899999999999999999999999999998887664
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7e-40 Score=343.61 Aligned_cols=264 Identities=18% Similarity=0.192 Sum_probs=196.2
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
.+..|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ ..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EID 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EET
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----eeC
Confidence 456799999999999999999999989999999999743222 235678999999999999999999995 445
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQ----------GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred CeEEEEEEecCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 6899999999999999998632 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+......... ......|++.|+||| +..+..++.++||||||+++|+|++|+.||...... .+......
T Consensus 174 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~ 249 (309)
T 2h34_A 174 YLVDFGIASATTDEKLT-QLGNTVGTLYYMAPE-RFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQ 249 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGG-GTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHS
T ss_pred EEecCccCccccccccc-cccccCCCcCccCHH-HHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhcc
Confidence 99999999766543221 122345899999995 556678899999999999999999999998632111 11111111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-CHHHHHHHHHHHHHhhc
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-NMTIVVHELQSIKSILL 711 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~ 711 (741)
..+.. . .....++..+.+++.+||+.||++|| |++|+++.|+.+.....
T Consensus 250 ~~~~~-~---------------------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 250 AIPRP-S---------------------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp CCCCG-G---------------------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCc-c---------------------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 00000 0 00113345688999999999999999 99999999988775554
No 153
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-39 Score=345.86 Aligned_cols=268 Identities=20% Similarity=0.261 Sum_probs=198.9
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc-----CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL-----HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
.+..+|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|+.++++++||||+++++++
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~----- 97 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY----- 97 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh-----
Confidence 4667899999999999999999999999999999999743 234456788999999999999999999995
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCc------------------------------ccCcccccCHHHHHHHHHHH
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADK------------------------------TVEAPKCLNFLQRINIAIDV 521 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------~~~~~~~~~~~~~~~i~~qi 521 (741)
.+....++||||+++|+|.+++........ .......+++..++.++.|+
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 456689999999999999999852110000 00012334677788999999
Q ss_pred HHHHHHHHhcCCCCceecCCCCCCeEeCCCC--ceEEeecccccccCCCCc--ccccccccccccccCcccccC-CCCCC
Q 037916 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEM--TAHVADFGLAKLLPPAHL--QTSSIGVKGTIGYIAPAEYGL-GSEVS 596 (741)
Q Consensus 522 ~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~--~~kL~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPEe~~~-~~~~~ 596 (741)
+.||+|||+. +|+||||||+||+++.++ .+||+|||.+........ ........||+.|+|||.+.. ...++
T Consensus 178 ~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 178 FSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC
Confidence 9999999999 999999999999998776 899999999986533211 112233569999999965543 36789
Q ss_pred CccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHH
Q 037916 597 INGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLI 676 (741)
Q Consensus 597 ~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (741)
.++|||||||++|||++|+.||......+ ... .+.......... ......+
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~------------~~~~~~~~~~~~----------------~~~~~~~ 305 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVNDAD-TIS------------QVLNKKLCFENP----------------NYNVLSP 305 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH------------HHHHCCCCTTSG----------------GGGGSCH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCChHH-HHH------------HHHhcccccCCc----------------ccccCCH
Confidence 99999999999999999999986321111 011 111111100000 0012345
Q ss_pred HHHHHhhcccccCCCCCCCHHHHHH
Q 037916 677 SVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 677 ~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+.+++.+||+.||++|||+.|+++
T Consensus 306 ~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 306 LARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 6889999999999999999999986
No 154
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.8e-40 Score=338.10 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=187.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc----CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH----GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++.+.||+|+||.||+|.+. +..||+|+++.... ...+.+.+|+.+++.++||||+++++++ ..+.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKEP 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC-
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCC
Confidence 45788899999999999999985 78999999864322 2245778999999999999999999995 4455
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC---ceecCCCCCCeEeCC--
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT---TAHCDLKPSNVLLDH-- 550 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~---ivHrDlkp~NIll~~-- 550 (741)
..++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. + |+||||||+||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~ 145 (271)
T 3dtc_A 80 NLCLVMEFARGGPLNRVLSG-----------KRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKV 145 (271)
T ss_dssp -CEEEEECCTTEEHHHHHTS-----------SCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCC
T ss_pred ceEEEEEcCCCCCHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEeccc
Confidence 78999999999999999852 3578899999999999999999999 7 999999999999986
Q ss_pred ------CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccC
Q 037916 551 ------EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEG 624 (741)
Q Consensus 551 ------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~ 624 (741)
++.+||+|||.+......... ...||+.|+||| ...+..++.++||||+|+++|+|++|+.||......
T Consensus 146 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 220 (271)
T 3dtc_A 146 ENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPE-VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220 (271)
T ss_dssp SSSCCSSCCEEECCCCC-----------------CCGGGSCHH-HHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH
T ss_pred ccccccCcceEEccCCccccccccccc----CCCCccceeCHH-HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 678999999999865543221 245899999995 445667899999999999999999999998632111
Q ss_pred CcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHH
Q 037916 625 NMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704 (741)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 704 (741)
.... ........... +..+++.+.+++.+||+.||++|||+.|+++.|+
T Consensus 221 ~~~~-------------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 221 AVAY-------------GVAMNKLALPI------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp HHHH-------------HHHTSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHH-------------hhhcCCCCCCC------------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 0000 00000000000 0123456889999999999999999999999997
Q ss_pred HH
Q 037916 705 SI 706 (741)
Q Consensus 705 ~i 706 (741)
++
T Consensus 270 ~l 271 (271)
T 3dtc_A 270 TI 271 (271)
T ss_dssp C-
T ss_pred cC
Confidence 64
No 155
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.8e-40 Score=363.39 Aligned_cols=258 Identities=23% Similarity=0.370 Sum_probs=203.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|.+.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++. ....++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~~l 259 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYI 259 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCEE
T ss_pred HHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCccEE
Confidence 35778889999999999999997 57889999997533 34678899999999999999999999863 346799
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 260 v~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp EECCCTTCBHHHHHHSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECST
T ss_pred EEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeC
Confidence 99999999999999643 113578889999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|+++........ ......+++.|+||| +.....++.++|||||||++|||++ |+.||...... .....
T Consensus 329 G~a~~~~~~~~~-~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~------- 397 (454)
T 1qcf_A 329 GLARVIEDNEYT-AREGAKFPIKWTAPE-AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRA------- 397 (454)
T ss_dssp TGGGGBCCHHHH-TTCSSSSCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH-------
T ss_pred CCceEcCCCcee-ccCCCcccccccCHH-HhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHH-------
Confidence 999876543211 122234678999995 4456678999999999999999999 99998632111 11000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
+..... ...+..+++.+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 398 -----i~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 398 -----LERGYR------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -----HHHTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -----HHcCCC------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 100000 0001234567889999999999999999999999999886543
No 156
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.9e-40 Score=352.37 Aligned_cols=247 Identities=25% Similarity=0.272 Sum_probs=187.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---CcchhHHHHHHH-HHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---GASKSSIAECSA-LRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++++.||+|+||.||+|++..+++.||+|+++.... .....+..|..+ ++.++||||++++++ +.+..
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~-----~~~~~ 112 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS-----FQTAD 112 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE-----EECSS
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE-----EEeCC
Confidence 468899999999999999999999999999999975332 223445667666 567899999999999 45566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||++||+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++++|
T Consensus 113 ~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ik 179 (373)
T 2r5t_A 113 KLYFVLDYINGGELFYHLQRE----------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIV 179 (373)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEE
Confidence 899999999999999998633 4578889999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|+|||+++....... ......||+.|+|| |+..+..++.++||||+||++|||++|..||..... ....
T Consensus 180 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~--- 248 (373)
T 2r5t_A 180 LTDFGLCKENIEHNS--TTSTFCGTPEYLAP-EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMY--- 248 (373)
T ss_dssp ECCCCBCGGGBCCCC--CCCSBSCCCCCCCH-HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHH---
T ss_pred EeeCccccccccCCC--ccccccCCccccCH-HHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHH---
Confidence 999999986433221 12235699999999 555677899999999999999999999999863211 1111
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHH
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVV 700 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 700 (741)
..+....... +......+.+++.+||+.||++||++.+.+
T Consensus 249 -----~~i~~~~~~~--------------------~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 249 -----DNILNKPLQL--------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp -----HHHHHSCCCC--------------------CSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred -----HHHHhcccCC--------------------CCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 1111111000 012235678999999999999999986433
No 157
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-39 Score=353.66 Aligned_cols=254 Identities=19% Similarity=0.173 Sum_probs=198.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++|||||++++++ .+...
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~~ 143 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDDRY 143 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCE
Confidence 3577788999999999999999999999999999742 233456688999999999999999999994 55678
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||++||+|.+++.. ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||
T Consensus 144 ~~lV~E~~~gg~L~~~l~~-----------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 209 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 209 (410)
T ss_dssp EEEEECCCTTEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEE
Confidence 9999999999999999863 2478889999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCC---CCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGS---EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~---~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+|||+|+......... .....||+.|+|||.+.... .++.++||||+||++|||++|+.||..... .....
T Consensus 210 ~DFG~a~~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~ 283 (410)
T 3v8s_A 210 ADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYS 283 (410)
T ss_dssp CCCTTCEECCTTSEEE-CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH
T ss_pred eccceeEeeccCCccc-ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHHH
Confidence 9999998765443221 22356999999996554332 288999999999999999999999862211 11111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCC--CCCHHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQD--RMNMTIVVHE 702 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 702 (741)
.+......... +........+.+++.+||..+|.+ ||++.||++-
T Consensus 284 --------~i~~~~~~~~~----------------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 284 --------KIMNHKNSLTF----------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --------HHHTHHHHCCC----------------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --------HHHhccccccC----------------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11100000000 000123456789999999999988 9999998864
No 158
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.9e-39 Score=339.55 Aligned_cols=253 Identities=21% Similarity=0.242 Sum_probs=198.1
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.+...|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|+.++++++||||+++++++ .+...
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 80 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTH 80 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCE
Confidence 3567899999999999999999999989999999999865444556788999999999999999999994 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CCCCc
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMT 553 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~~~~ 553 (741)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+. ||+||||||+||++ +.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~ 147 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILER----------GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSK 147 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCC
T ss_pred EEEEEEcCCCccHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCC
Confidence 99999999999999988532 4578899999999999999999999 99999999999999 77889
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+||+|||.+....... .....||+.|+||| +..+..++.++||||+||++|+|++|..||...... .....+.
T Consensus 148 ~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~ 220 (304)
T 2jam_A 148 IMITDFGLSKMEQNGI----MSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIK 220 (304)
T ss_dssp EEBCSCSTTCCCCCBT----THHHHSCCCBCCTT-TBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH
T ss_pred EEEccCCcceecCCCc----cccccCCCCccChH-HhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH
Confidence 9999999987544321 12245899999994 556778899999999999999999999998632110 0000000
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. ...... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~-----------~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 221 EG-----------YYEFES----------------PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HC-----------CCCCCT----------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cC-----------CCCCCc----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 000000 000123456889999999999999999999986
No 159
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-40 Score=352.54 Aligned_cols=280 Identities=18% Similarity=0.178 Sum_probs=193.6
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCcc-ccCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVD-YKGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~~~~~ 477 (741)
.|++++.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.... ..+....
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 47888999999999999999999999999999864222 22456789999999999999999999975432 1122457
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 106 ~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 170 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH-----------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKIL 170 (367)
T ss_dssp EEEEECC-SEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEE
Confidence 9999999 8899999862 3478889999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||+++..... .....||+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+.........
T Consensus 171 Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~ 244 (367)
T 1cm8_A 171 DFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGT 244 (367)
T ss_dssp CCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCC
T ss_pred eeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCC
Confidence 99999875432 223468999999976665578999999999999999999999998632111 111111111000
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
...++................................+.+.+++.+||..||++|||+.|+++-
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 245 -PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp -CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0001110000000000000000000000000112335678899999999999999999999873
No 160
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.4e-39 Score=357.68 Aligned_cols=265 Identities=19% Similarity=0.231 Sum_probs=203.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCC-CceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRH-KNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|++.++||+|+||.||+|++..+++.||||+++.. .....+.+|+.+++.+.| ++|+.+..+ .......+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~~~~E~~il~~L~~~~~i~~i~~~-----~~~~~~~~ 79 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKIYRILQGGTGIPNVRWF-----GVEGDYNV 79 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETT--CSSCCHHHHHHHHHHTTTSTTCCCEEEE-----EEETTEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEE-----EeeCCEEE
Confidence 4688999999999999999999989999999998743 334568899999999987 455555544 34456889
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CCCCceE
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAH 555 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 555 (741)
+||||+ +++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+|
T Consensus 80 lvme~~-g~sL~~ll~~~---------~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC---------SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEE
Confidence 999999 99999998632 24589999999999999999999999 99999999999999 5788999
Q ss_pred EeecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 556 VADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
|+|||+++........ .......||+.|+|| |+..+..++.++|||||||++|||++|+.||........ ..
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP-E~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~ 223 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV-NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQ 223 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCH-HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HH
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCH-HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HH
Confidence 9999999876544321 112245699999999 555677899999999999999999999999974322110 00
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
.+. .+.+...... .......++..+.+++..||+.||++||++.+|++.|+++....
T Consensus 224 ~~~--------~i~~~~~~~~---------------~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 224 KYE--------KISEKKVATS---------------IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHH--------HHHHHHHHSC---------------HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHH--------HHhhcccccc---------------HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 000 0000000000 00011234567899999999999999999999999999997643
No 161
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1e-39 Score=338.11 Aligned_cols=260 Identities=22% Similarity=0.308 Sum_probs=205.7
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc----
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY---- 471 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~---- 471 (741)
..+...|++.+.||+|+||.||+|.+..+++.||+|+++.. .+.+.+|+.++++++||||+++++++....+
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 45667899999999999999999999989999999999743 2467789999999999999999998643211
Q ss_pred -------cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 472 -------KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 472 -------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
......++||||+++++|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~ 151 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--------RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPS 151 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG--------GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHH
Confidence 1244689999999999999998643 124588899999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccC
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEG 624 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~ 624 (741)
||+++.++.+||+|||.+......... ....||+.|+||| +..+..++.++||||+||++|+|++|..|+....
T Consensus 152 Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-- 225 (284)
T 2a19_B 152 NIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVCDTAFETS-- 225 (284)
T ss_dssp GEEEEETTEEEECCCTTCEESSCCSCC---CCCCSCCTTSCHH-HHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--
T ss_pred HEEEcCCCCEEECcchhheeccccccc---cccCCcccccChh-hhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--
Confidence 999999999999999999876554322 2245899999995 4456778999999999999999999998864110
Q ss_pred CcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHH
Q 037916 625 NMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704 (741)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 704 (741)
... ..+.+.... ...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 226 -----~~~--------~~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 226 -----KFF--------TDLRDGIIS----------------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp -----HHH--------HHHHTTCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHH--------HHhhccccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 000 000000000 012345779999999999999999999999999
Q ss_pred HHHHhhc
Q 037916 705 SIKSILL 711 (741)
Q Consensus 705 ~i~~~~~ 711 (741)
.+.+...
T Consensus 271 ~~~~~~~ 277 (284)
T 2a19_B 271 VWKKSPE 277 (284)
T ss_dssp HHTC---
T ss_pred HHhhCCC
Confidence 8876544
No 162
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=341.71 Aligned_cols=248 Identities=23% Similarity=0.244 Sum_probs=190.4
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--cchhHHHHHHHHHhc-CCCceeeEeeeecCccccC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 473 (741)
++..+|++.++||+|+||.||+|++..+++.||||++...... .......|+..+.++ +||||++++++| ..
T Consensus 54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~ 128 (311)
T 3p1a_A 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EE 128 (311)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----Ee
Confidence 3557899999999999999999999989999999998643222 223444556555555 899999999995 45
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
+...++||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~ 195 (311)
T 3p1a_A 129 GGILYLQTELC-GPSLQQHCEAW---------GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGR 195 (311)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHH---------CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGC
T ss_pred CCEEEEEEecc-CCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCC
Confidence 66899999999 77999887633 24589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+||+|||++......... ....||+.|+|||.+ .+ .++.++|||||||++|||++|..|+... ........
T Consensus 196 ~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~ 266 (311)
T 3p1a_A 196 CKLGDFGLLVELGTAGAG---EVQEGDPRYMAPELL-QG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQ 266 (311)
T ss_dssp EEECCCTTCEECC---------CCCCCGGGCCGGGG-GT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTT
T ss_pred EEEccceeeeecccCCCC---cccCCCccccCHhHh-cC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhc
Confidence 999999999876543322 224589999999654 33 6899999999999999999997665311 11111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
...+. ......++.+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~------------------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 267 GYLPP------------------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TCCCH------------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCc------------------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11000 001133567889999999999999999999985
No 163
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=335.10 Aligned_cols=249 Identities=24% Similarity=0.333 Sum_probs=180.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ .+...
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 85 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSNY 85 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSSE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCCe
Confidence 56889999999999999999998899999999996422 22346788999999999999999999994 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.+++... ...+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl 153 (278)
T 3cok_A 86 VYLVLEMCHNGEMNRYLKNR---------VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKI 153 (278)
T ss_dssp EEEEEECCTTEEHHHHHHTC---------SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEE
Confidence 99999999999999998643 24588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+......... .....||+.|+||| ...+..++.++||||+||++|+|++|+.||....... ......
T Consensus 154 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~ 225 (278)
T 3cok_A 154 ADFGLATQLKMPHEK--HYTLCGTPNYISPE-IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVV 225 (278)
T ss_dssp CCCTTCEECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CC
T ss_pred EeecceeeccCCCCc--ceeccCCCCcCCcc-hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHh
Confidence 999999876533221 12245899999995 5566778999999999999999999999986321111 000000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. ... .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~------------~~~----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LA------------DYE----------------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SS------------CCC----------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hc------------ccC----------------CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 000 00012345779999999999999999999885
No 164
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3e-39 Score=335.70 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=194.7
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
|.+.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++.... .+....++
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~l 106 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEEE
Confidence 566778999999999999999999999999997432 223456789999999999999999999864321 34567899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeC-CCCceEE
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLD-HEMTAHV 556 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~-~~~~~kL 556 (741)
||||+++++|.+++... ..+++..++.++.|++.||.|||+. + |+||||||+||+++ .++.+||
T Consensus 107 v~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl 173 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----------KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKI 173 (290)
T ss_dssp EEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred EEEecCCCCHHHHHHHc----------cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEE
Confidence 99999999999998632 4578899999999999999999999 8 99999999999997 7889999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+........ ....||+.|+|||.+ . +.++.++||||+||++|+|++|+.||...... ........
T Consensus 174 ~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~ 243 (290)
T 1t4h_A 174 GDLGLATLKRASFA----KAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRVT 243 (290)
T ss_dssp CCTTGGGGCCTTSB----EESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHHT
T ss_pred eeCCCccccccccc----ccccCCcCcCCHHHH-h-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHHHh
Confidence 99999976544322 224589999999654 3 45899999999999999999999998632111 11111111
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
........ .....+.+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 244 SGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCcccc--------------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00000000 0112346889999999999999999999985
No 165
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.7e-39 Score=333.77 Aligned_cols=260 Identities=19% Similarity=0.244 Sum_probs=201.3
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------cchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------ASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
+...|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~----- 77 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF----- 77 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----
Confidence 446799999999999999999999989999999999743221 246788999999999999999999995
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 144 (283)
T 3bhy_A 78 ENKTDVVLILELVSGGELFDFLAEK----------ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDK 144 (283)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCS
T ss_pred cCCCeEEEEEeecCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecC
Confidence 4556899999999999999998632 4588999999999999999999999 99999999999999887
Q ss_pred C----ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 552 M----TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 552 ~----~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
+ .+||+|||.+......... ....||+.|+||| +..+..++.++||||+|+++|+|++|..||....... .
T Consensus 145 ~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~ 219 (283)
T 3bhy_A 145 NVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-T 219 (283)
T ss_dssp SSSSCCEEECCCTTCEECC-----------CCCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-H
T ss_pred CCCCCceEEEecccceeccCCCcc---cccCCCcCccCcc-eecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-H
Confidence 7 8999999999876543221 2245899999995 5566788999999999999999999999986321100 0
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH--HHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH--ELQS 705 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 705 (741)
....... .. ... .......++.+.+++.+||..||++|||+.|+++ -++.
T Consensus 220 ~~~~~~~-~~-------------~~~--------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 220 LTNISAV-NY-------------DFD--------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp HHHHHTT-CC-------------CCC--------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred HHHhHhc-cc-------------CCc--------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 0000000 00 000 0001123456889999999999999999999997 3555
Q ss_pred HHH
Q 037916 706 IKS 708 (741)
Q Consensus 706 i~~ 708 (741)
+..
T Consensus 272 ~~~ 274 (283)
T 3bhy_A 272 IRR 274 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 166
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-39 Score=342.04 Aligned_cols=268 Identities=21% Similarity=0.227 Sum_probs=194.4
Q ss_pred HHHHh-hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFL-CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~-~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
.|++. +.||+|+||.||+|.+..+++.||+|+++.........+.+|+.+++++ +||||+++++++ .+....|
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~~~~~ 87 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEEDRFY 87 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEE
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCCEEE
Confidence 46664 6799999999999999989999999999865555567788999999885 799999999995 4566899
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc---eE
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT---AH 555 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~---~k 555 (741)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 88 lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~k 154 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR----------RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVK 154 (316)
T ss_dssp EEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEE
T ss_pred EEEEcCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceE
Confidence 999999999999998643 4578999999999999999999999 9999999999999988765 99
Q ss_pred EeecccccccCCCCc-----ccccccccccccccCcccccC----CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCc
Q 037916 556 VADFGLAKLLPPAHL-----QTSSIGVKGTIGYIAPAEYGL----GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM 626 (741)
Q Consensus 556 L~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPEe~~~----~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~ 626 (741)
|+|||++........ ........||+.|+|||.+.. ...++.++||||+||++|+|++|+.||......+.
T Consensus 155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 234 (316)
T 2ac3_A 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234 (316)
T ss_dssp ECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS
T ss_pred EEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc
Confidence 999999876542211 111122458999999965532 24578999999999999999999999974432221
Q ss_pred chhhhhhhcCCcc-hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 627 NLHNFARTVLPDH-VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 627 ~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
... ....... ...+.+......... ........+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~---~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 235 GWD---RGEACPACQNMLFESIQEGKYEF------------PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CC-------CCHHHHHHHHHHHHHCCCCC------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc---ccccchhHHHHHHHHHhccCccc------------CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 110 0000000 001111100000000 00001123567889999999999999999999986
No 167
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=345.58 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=195.7
Q ss_pred HHHHhhhcccCceeeEEEEEEcCC----CeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEG----KTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.|.+.+.||+|+||.||+|.+..+ +..||+|+++.... .....+.+|+.++++++||||+++++++ ....
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 119 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SKYK 119 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSS
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ecCC
Confidence 456678899999999999998644 35699999974322 2344678999999999999999999995 4556
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~k 187 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREK---------DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCK 187 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHT---------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred CcEEEEeCCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEE
Confidence 899999999999999998632 24588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCccc-ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 556 VADFGLAKLLPPAHLQT-SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~-~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
|+|||.+.......... ......+|+.|+||| ...+..++.++|||||||++|||++ |+.||...... .....+.
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~ 264 (333)
T 1mqb_A 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAIN 264 (333)
T ss_dssp ECCCCC-----------------CCCGGGSCHH-HHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHH
T ss_pred ECCCCcchhhccccccccccCCCCccccccCch-hcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHH
Confidence 99999998765432211 112234678899995 4456778999999999999999999 99998632110 0000000
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcC
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLG 712 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 712 (741)
+...... ...++..+.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 265 -----------~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 265 -----------DGFRLPT-------------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp -----------TTCCCCC-------------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred -----------CCCcCCC-------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0000000 012346688999999999999999999999999999875543
No 168
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.3e-40 Score=348.09 Aligned_cols=255 Identities=20% Similarity=0.258 Sum_probs=196.2
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCc
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.+...|++.+.||+|+||.||+|.+..+++.||+|+++... ....+|++++.++ +||||++++++ +.++.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~-----~~~~~ 89 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDV-----YDDGK 89 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEE-----EECSS
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEE-----EEcCC
Confidence 45678999999999999999999999999999999997432 2345788888887 79999999999 45667
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC----
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---- 551 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~---- 551 (741)
..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||++.++
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~ 156 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQ----------KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNP 156 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTC----------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSG
T ss_pred EEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCc
Confidence 899999999999999998643 4588999999999999999999999 99999999999998543
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+.+||+|||++......... .....||+.|+||| +..+..++.++||||+||++|||++|..||..... ......
T Consensus 157 ~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~ 231 (342)
T 2qr7_A 157 ESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEI 231 (342)
T ss_dssp GGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHH
T ss_pred CeEEEEECCCcccCcCCCCc--eeccCCCccccCHH-HhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHH
Confidence 35999999999876543221 22356899999995 44455688999999999999999999999863211 111111
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
... +.......... ......+.+.+++.+||..||++|||+.|+++-
T Consensus 232 ~~~--------i~~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 232 LAR--------IGSGKFSLSGG----------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHH--------HHHCCCCCCST----------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHH--------HccCCcccCcc----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 00000000000 001234567899999999999999999998863
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.3e-40 Score=348.37 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=193.1
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
.....+|++.++||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ ..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 104 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HH 104 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ec
Confidence 3455789999999999999999999999999999999974332 2244567899999999999999999994 45
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC----
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD---- 549 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~---- 549 (741)
+...++||||++ |+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMDKN----------PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred CCEEEEEEecCC-CCHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 668999999996 5999998643 4588999999999999999999999 999999999999994
Q ss_pred -CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 550 -HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 550 -~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
..+.+||+|||.+......... .....||+.|+|||.+.....++.++||||+||++|||++|..||......+ .+
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~ 247 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QL 247 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred CccceEEECcCCCccccCCcccc--cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HH
Confidence 4556999999999876533221 2224589999999766555678999999999999999999999986332111 11
Q ss_pred hhhhhhc-CCcc--hhHhhh-hcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 629 HNFARTV-LPDH--VMDIVD-STLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 629 ~~~~~~~-~~~~--~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....... .+.. ...... +.......... .............+.+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFR------GKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC------CCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhc------cccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1111110 0000 000000 00000000000 000000011123466789999999999999999999975
No 170
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.2e-38 Score=367.10 Aligned_cols=338 Identities=24% Similarity=0.234 Sum_probs=199.8
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|.+++++. .||..+. +++++|+|++|+|+++.+..|.++++|++|+|++|++++..|..|.++++ |
T Consensus 10 ~cs~~~L~-~ip~~~~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~----------L 75 (680)
T 1ziw_A 10 DCSHLKLT-QVPDDLP---TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPM----------L 75 (680)
T ss_dssp ECCSSCCS-SCCSCSC---TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTT----------C
T ss_pred ECCCCCcc-ccccccC---CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccC----------c
Confidence 45556665 5666554 56677777777766666666666677777777777766666666666654 6
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+++++.+..|..+. +|++|+|++|++.++.|..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCT-NLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 154 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCS
T ss_pred CEEECCCCccCccChhhhccCC-CCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccC
Confidence 6666666666655555566666 666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCcCccccc--CCcccceeeccCcccccccCcccccC---------------------------CCCCEEeccCccc
Q 037916 162 NKLSGNIPPSIG--NLKKLLQLYLIENFLQVSIPSSLGQC---------------------------QSLTTINLSYNNL 212 (741)
Q Consensus 162 N~l~~~~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l---------------------------~~L~~L~L~~N~l 212 (741)
|++++..+..|. .+++|++|++++|.+++..|..|..+ ++|+.|++++|++
T Consensus 155 n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l 234 (680)
T 1ziw_A 155 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQL 234 (680)
T ss_dssp SCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCC
T ss_pred CcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcc
Confidence 666655555443 34566666666666665555544433 3445555555555
Q ss_pred cccCCcccccccc--ceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhh----------------------
Q 037916 213 SGTIPPQLMDLTS--LSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILST---------------------- 268 (741)
Q Consensus 213 ~~~~p~~~~~l~~--L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---------------------- 268 (741)
++..|..|.+++. |+. |+|++|++++..|..|+.+++|++|+|++|.++++.+..
T Consensus 235 ~~~~~~~~~~l~~~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~ 313 (680)
T 1ziw_A 235 STTSNTTFLGLKWTNLTM-LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313 (680)
T ss_dssp CEECTTTTGGGGGSCCCE-EECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC---
T ss_pred cccChhHhhccCcCCCCE-EECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccc
Confidence 5555555555543 554 666666655555555555666666666666555554444
Q ss_pred -----------ccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCC--ccchhhhcc--ccCCcccccCccc
Q 037916 269 -----------LGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISG--EIPKFLVEL--QLVQNLNLSYNDL 333 (741)
Q Consensus 269 -----------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l--~~L~~L~l~~N~l 333 (741)
|..+++|++|++++|++++..+..|.++++|++|+|++|.++. ..+..|..+ ++|+.|++++|.+
T Consensus 314 ~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l 393 (680)
T 1ziw_A 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI 393 (680)
T ss_dssp ---CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCC
T ss_pred cccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCC
Confidence 4445555555555566655555555555555555555554321 111222222 2455555555666
Q ss_pred ccccCCc-cccCCcccccccCCC
Q 037916 334 EGVIPTE-GVFKNASAISVFGNS 355 (741)
Q Consensus 334 ~~~~~~~-~~~~~~~~~~~~~n~ 355 (741)
++.+|.. ..+++++.+++.+|.
T Consensus 394 ~~~~~~~~~~l~~L~~L~L~~N~ 416 (680)
T 1ziw_A 394 SKIESDAFSWLGHLEVLDLGLNE 416 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSSC
T ss_pred CeEChhhhhCCCCCCEEeCCCCc
Confidence 6555433 345667777777774
No 171
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=350.15 Aligned_cols=269 Identities=14% Similarity=0.152 Sum_probs=202.9
Q ss_pred HHHHhhhcccCceeeEEEEEEcC--------CCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeE----------
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDE--------GKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKI---------- 462 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~---------- 462 (741)
.|++.+.||+|+||.||+|++.. .++.||+|+++.. +.+.+|+.++++++||||+++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 57888999999999999999986 3889999998632 578899999999999999984
Q ss_pred -----eeeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCce
Q 037916 463 -----LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537 (741)
Q Consensus 463 -----~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv 537 (741)
++++ ...+...++||||+ +++|.+++... ....+++..++.++.||+.||+|||+. +|+
T Consensus 118 ~i~~~~~~~----~~~~~~~~lv~e~~-~~~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iv 181 (352)
T 2jii_A 118 AIPTCMGFG----VHQDKYRFLVLPSL-GRSLQSALDVS--------PKHVLSERSVLQVACRLLDALEFLHEN---EYV 181 (352)
T ss_dssp SCCCCCEEE----EETTTEEEEEEECC-CEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCB
T ss_pred Cccchhhcc----ccCCcEEEEEecCC-CcCHHHHHHhC--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 4443 22356889999999 99999999743 125689999999999999999999999 999
Q ss_pred ecCCCCCCeEeCCCC--ceEEeecccccccCCCCcc-----cccccccccccccCcccccCCCCCCCccCchhHHHHHHH
Q 037916 538 HCDLKPSNVLLDHEM--TAHVADFGLAKLLPPAHLQ-----TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLE 610 (741)
Q Consensus 538 HrDlkp~NIll~~~~--~~kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~e 610 (741)
||||||+||+++.++ .+||+|||+++........ .......||+.|+|| |+..+..++.++|||||||++||
T Consensus 182 H~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~il~e 260 (352)
T 2jii_A 182 HGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM-DLHKGCGPSRRSDLQSLGYCMLK 260 (352)
T ss_dssp CSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH-HHHTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCH-HHHccCCCCchhhHHHHHHHHHH
Confidence 999999999999998 9999999999876543211 111234699999999 55566789999999999999999
Q ss_pred HHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCC
Q 037916 611 LMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESP 690 (741)
Q Consensus 611 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 690 (741)
|++|+.||.........+......... ....+.+.... ....++.+.+++.+||+.||
T Consensus 261 l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~dp 318 (352)
T 2jii_A 261 WLYGFLPWTNCLPNTEDIMKQKQKFVD-KPGPFVGPCGH---------------------WIRPSETLQKYLKVVMALTY 318 (352)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHH-SCCCEECTTSC---------------------EECCCHHHHHHHHHHHTCCT
T ss_pred HHhCCCCcccCCcCHHHHHHHHHhccC-Chhhhhhhccc---------------------cCCCcHHHHHHHHHHHhCCh
Confidence 999999997432221111111110000 00000000000 00124668899999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCC
Q 037916 691 QDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 691 ~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
++|||+.||++.|+++.+.....
T Consensus 319 ~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 319 EEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TCCCCHHHHHHHHHHHHHHTTCC
T ss_pred hhCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999877644
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=351.07 Aligned_cols=270 Identities=20% Similarity=0.271 Sum_probs=192.7
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.|+++++||+|+||.||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++ ......++
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 77 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLTL 77 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEEE
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEEE
Confidence 47888999999999999999998999999999974322 2223455799999999999999999995 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||++ |+|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+||
T Consensus 78 v~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 144 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDDC---------GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADF 144 (324)
T ss_dssp EEECCS-EEHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSS
T ss_pred Eecccc-cCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccC
Confidence 999996 5998888643 24588899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC---
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL--- 636 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--- 636 (741)
|.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||......+ ..........
T Consensus 145 g~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 221 (324)
T 3mtl_A 145 GLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPT 221 (324)
T ss_dssp SEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred cccccccCCccc--cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 999865433221 2234589999999766555778999999999999999999999996432111 1111111000
Q ss_pred CcchhHhhhh-----cccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDS-----TLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.......... ....... ............+.+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 222 EETWPGILSNEEFKTYNYPKYR----------AEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TTTSTTGGGCHHHHHTCCCCCC----------CCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHhchhhhcchhhccccccccc----------chhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000 0000000 00001111234466789999999999999999999987
No 173
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-39 Score=343.94 Aligned_cols=248 Identities=21% Similarity=0.213 Sum_probs=186.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEc---CCCeEEEEEEeeccC----cCcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD---EGKTIIAVKVLNLLH----HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
..|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+.++++++||||+++++++ .
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 91 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF-----Q 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----E
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----E
Confidence 56889999999999999999984 588999999997432 22345577899999999999999999994 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
.....|+||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~ 158 (327)
T 3a62_A 92 TGGKLYLILEYLSGGELFMQLERE----------GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQG 158 (327)
T ss_dssp CSSCEEEEEECCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTS
T ss_pred cCCEEEEEEeCCCCCcHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCC
Confidence 566899999999999999998632 4578889999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||+++........ .....||+.|+||| +..+..++.++||||+||++|+|++|+.||...... ...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~ 230 (327)
T 3a62_A 159 HVKLTDFGLCKESIHDGTV--THTFCGTIEYMAPE-ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----KTI 230 (327)
T ss_dssp CEEECCCSCC------------CTTSSCCTTSCHH-HHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHH
T ss_pred cEEEEeCCcccccccCCcc--ccccCCCcCccCHh-hCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----HHH
Confidence 9999999998764432211 22356999999995 556677899999999999999999999998632110 000
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVH 701 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 701 (741)
..+...... . +......+.+++.+||+.||++|| ++.|+++
T Consensus 231 --------~~i~~~~~~--~------------------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 231 --------DKILKCKLN--L------------------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --------HHHHHTCCC--C------------------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --------HHHHhCCCC--C------------------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011110000 0 012245678999999999999999 6777765
No 174
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.4e-40 Score=347.92 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=187.9
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--cchhHHHHHHHHHhcCC--CceeeEeeeecCccccCCce
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNIRH--KNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--pnIv~~~~~~~~~~~~~~~~ 476 (741)
.|++.+.||+|+||.||+|.+. +++.||+|+++..... ..+.+.+|+.++++++| |||+++++++ ..+..
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~~~ 83 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQY 83 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred EEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeCCE
Confidence 4788999999999999999986 6889999999743322 23567899999999976 9999999994 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++|||+ .+++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl 148 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKL 148 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHS----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEE
T ss_pred EEEEEeC-CCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEE
Confidence 9999995 588999998643 4588899999999999999999999 999999999999997 678999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccC----------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCc
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL----------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM 626 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~----------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~ 626 (741)
+|||++................||+.|+|||.+.. ...++.++|||||||++|||++|+.||........
T Consensus 149 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 228 (343)
T 3dbq_A 149 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 228 (343)
T ss_dssp CCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred eecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH
Confidence 99999987655433323334569999999965432 26789999999999999999999999863211111
Q ss_pred chhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 627 NLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+ ...++........ ......+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~------------~~~~~~~~~~~~~------------------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 229 KL------------HAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HH------------HHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH------------HHHhcCCcccCCc------------------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11 1111111111110 0113457799999999999999999999864
No 175
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.3e-39 Score=346.33 Aligned_cols=286 Identities=20% Similarity=0.238 Sum_probs=200.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccc---cCC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDY---KGD 474 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~---~~~ 474 (741)
.+|++++.||+|+||.||+|++..+++.||+|++..... .....+.+|+.+++.++||||+++++++..... ...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 568899999999999999999998999999999864332 234567899999999999999999999754221 114
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...++||||+++ ++.+.+... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~ 163 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---------LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVL 163 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred ceEEEEEeccCC-CHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCE
Confidence 578999999964 777776532 24588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCc--ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 555 HVADFGLAKLLPPAHL--QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
||+|||.+........ ........||+.|+|||.+.....++.++||||+||++|+|++|..||....... ......
T Consensus 164 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~ 242 (351)
T 3mi9_A 164 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALIS 242 (351)
T ss_dssp EECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred EEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence 9999999987653221 1222335689999999766555678999999999999999999999987432111 111111
Q ss_pred hh--cCCcchhHhhhh-cccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RT--VLPDHVMDIVDS-TLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~--~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.. ..+.......+. ........ ..................+.+.+++.+||+.||++|||+.|+++-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 243 QLCGSITPEVWPNVDNYELYEKLEL---VKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHCCCCTTTSTTGGGCGGGTSSCC---CSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCChhhccccccchhhccccc---ccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 011110000000 00000000 000000000000001124568899999999999999999999873
No 176
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.8e-39 Score=336.36 Aligned_cols=252 Identities=19% Similarity=0.223 Sum_probs=198.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++ ......
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 80 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFH 80 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCEE
Confidence 468899999999999999999999999999999974332 2335677899999999999999999994 456688
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc---e
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT---A 554 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~---~ 554 (741)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +
T Consensus 81 ~~v~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~ 147 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147 (284)
T ss_dssp EEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCE
T ss_pred EEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcE
Confidence 9999999999998887532 4588999999999999999999999 9999999999999986654 9
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||.+......... ....||+.|+|| |+..+..++.++||||+|+++|+|++|+.||....... ........
T Consensus 148 kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~ 222 (284)
T 3kk8_A 148 KLADFGLAIEVNDSEAW---HGFAGTPGYLSP-EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAG 222 (284)
T ss_dssp EECCCTTCEECCSSCBC---CCSCSCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT
T ss_pred EEeeceeeEEcccCccc---cCCCCCcCCcCc-hhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhc
Confidence 99999999876544322 235689999999 45567778999999999999999999999985321110 00000000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.... .. ......++.+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~~~------------~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 223 AYDY------------PS----------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCCC------------CT----------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cccC------------Cc----------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 00 0001234567899999999999999999999873
No 177
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-39 Score=352.74 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=188.3
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcC--CCceeeEeeeecCccccCCce
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIR--HKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.|.+.+.||+|+||.||+|.+.. ++.||||+++.... ...+.+.+|+.+++++. ||||+++++++ .....
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~-----~~~~~ 130 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQY 130 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred ceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE-----ecCCE
Confidence 38889999999999999999874 89999999974332 23467789999999996 59999999995 44557
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||| +.+++|.+++... ..+++.++..++.||+.||.|||+. +|+||||||+|||++ ++.+||
T Consensus 131 ~~lv~E-~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl 195 (390)
T 2zmd_A 131 IYMVME-CGNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKL 195 (390)
T ss_dssp EEEEEE-CCSEEHHHHHHHC----------SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEE
T ss_pred EEEEEe-cCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEE
Confidence 999999 5588999998643 3578888999999999999999999 999999999999995 579999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccC----------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCc
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL----------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM 626 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~----------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~ 626 (741)
+|||++................||+.|+|||.+.. ...++.++|||||||++|||++|+.||........
T Consensus 196 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 275 (390)
T 2zmd_A 196 IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 275 (390)
T ss_dssp CCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred EecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH
Confidence 99999987654433222334569999999965532 24689999999999999999999999863211100
Q ss_pred chhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 627 NLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+ ..+++........ ......+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~------------~~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 276 KL------------HAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HH------------HHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH------------HHHhCccccCCCC------------------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11 1111111111100 0113457899999999999999999999864
No 178
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-39 Score=336.12 Aligned_cols=247 Identities=22% Similarity=0.276 Sum_probs=195.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+|+.++++++||||+++++++ .+...
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 83 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATR 83 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecCCE
Confidence 46888999999999999999999999999999986322 23345678999999999999999999995 45568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l 150 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKL----------SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 150 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEE
Confidence 99999999999999998633 4578899999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+........ ....||+.|+||| +..+..++.++||||+|+++|+|++|..||..... .....
T Consensus 151 ~Dfg~~~~~~~~~~----~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~--- 217 (279)
T 3fdn_A 151 ADFGWSVHAPSSRR----TDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYK--- 217 (279)
T ss_dssp CSCCEESCC------------CCCCTTCCHH-HHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH---
T ss_pred EeccccccCCcccc----cccCCCCCccCHh-HhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHH---
Confidence 99999865443321 2246899999994 55677889999999999999999999999862211 00000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+..... .. +...++.+.+++.+||+.||++|||+.|+++.
T Consensus 218 -----~~~~~~~--~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 218 -----RISRVEF--TF------------------PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -----HHHHTCC--CC------------------CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -----HHHhCCC--CC------------------CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00 01234567799999999999999999999975
No 179
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.2e-39 Score=344.17 Aligned_cols=256 Identities=20% Similarity=0.298 Sum_probs=200.5
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--------cchhHHHHHHHHHhc-CCCceeeEeeee
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--------ASKSSIAECSALRNI-RHKNLVKILTVC 466 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~hpnIv~~~~~~ 466 (741)
..+...|.+.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 45667899999999999999999999888999999999753321 134567899999999 899999999994
Q ss_pred cCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 037916 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546 (741)
Q Consensus 467 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NI 546 (741)
......|+||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||
T Consensus 170 -----~~~~~~~lv~e~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NI 231 (365)
T 2y7j_A 170 -----ESSSFMFLVFDLMRKGELFDYLTEK----------VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231 (365)
T ss_dssp -----EBSSEEEEEECCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred -----eeCCEEEEEEEeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 4566899999999999999998632 4588999999999999999999999 999999999999
Q ss_pred EeCCCCceEEeecccccccCCCCcccccccccccccccCcccccC-----CCCCCCccCchhHHHHHHHHHcCCCCCCcc
Q 037916 547 LLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL-----GSEVSINGDVYSYGILLLELMTRKRPSDIM 621 (741)
Q Consensus 547 ll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~-----~~~~~~~~DIwSlG~il~elltg~~p~~~~ 621 (741)
+++.++.+||+|||++......... ....||+.|+|||.+.. ...++.++|||||||++|+|++|..||...
T Consensus 232 l~~~~~~ikl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 308 (365)
T 2y7j_A 232 LLDDNMQIRLSDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308 (365)
T ss_dssp EECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EECCCCCEEEEecCcccccCCCccc---ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC
Confidence 9999999999999999876544322 23569999999965432 346889999999999999999999998632
Q ss_pred ccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 622 FEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. ......+ ........ .......+..+.+++.+||+.||++|||+.|+++
T Consensus 309 ~~--~~~~~~i-----------~~~~~~~~----------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 309 RQ--ILMLRMI-----------MEGQYQFS----------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SH--HHHHHHH-----------HHTCCCCC----------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CH--HHHHHHH-----------HhCCCCCC----------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 0000000 00000000 0001123456889999999999999999999986
No 180
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=348.58 Aligned_cols=260 Identities=13% Similarity=0.085 Sum_probs=201.0
Q ss_pred HHHHhhhcccCceeeEEEEE-----EcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC---CCceeeEeeeecCcccc
Q 037916 401 SFLFLCWIDMGSFGSVYKGI-----LDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR---HKNLVKILTVCSGVDYK 472 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~ 472 (741)
.|.+.+.||+|+||.||+|. +..+++.||+|+++. .....+..|+.++++++ |+||+++++++ .
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~-----~ 137 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH-----L 137 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS---CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE-----E
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC---CChhHHHHHHHHHHHhhhhhhhhhhhhheee-----e
Confidence 47788899999999999994 566889999999963 34556778888888886 99999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC--
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH-- 550 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~-- 550 (741)
..+..|+||||+++|+|.+++...+. .....+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKN-----TPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHT-----STTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhc-----ccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 45578999999999999999964211 1235689999999999999999999999 9999999999999988
Q ss_pred ---------CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCcc
Q 037916 551 ---------EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621 (741)
Q Consensus 551 ---------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~ 621 (741)
++.+||+|||+|+...............||+.|+|| |+..+..++.++|||||||++|||++|+.||...
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV-EMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH-HHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh-HHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 899999999999765422222233446699999999 5556677999999999999999999999998633
Q ss_pred ccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCC-CCHHHHH
Q 037916 622 FEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR-MNMTIVV 700 (741)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl 700 (741)
..+........... . ..+.+.+++..|++.+|.+| |++.++.
T Consensus 289 ~~~~~~~~~~~~~~----------------~---------------------~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 289 EGGECKPEGLFRRL----------------P---------------------HLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp ETTEEEECSCCTTC----------------S---------------------SHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred CCCceeechhcccc----------------C---------------------cHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 22211111100000 0 12345688889999999999 6889999
Q ss_pred HHHHHHHHhhcCCc
Q 037916 701 HELQSIKSILLGPK 714 (741)
Q Consensus 701 ~~L~~i~~~~~~~~ 714 (741)
+.|+++.+......
T Consensus 332 ~~l~~~l~~~~~~~ 345 (365)
T 3e7e_A 332 QKLKKVFQQHYTNK 345 (365)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhhhhc
Confidence 99999887755443
No 181
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-39 Score=332.77 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=202.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|+.++++++||||+++++++ ......++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 80 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPICL 80 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeEE
Confidence 35788899999999999999997 67889999997533 2346788999999999999999999995 44557899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 v~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 148 (267)
T 3t9t_A 81 VTEFMEHGCLSDYLRTQ---------RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 148 (267)
T ss_dssp EECCCTTCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCT
T ss_pred EEeCCCCCcHHHHHhhC---------cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccc
Confidence 99999999999998643 23578899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+........ .......+++.|+||| ...+..++.++||||+|+++|+|++ |+.||..... ......
T Consensus 149 g~~~~~~~~~~-~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~---- 217 (267)
T 3t9t_A 149 GMTRFVLDDQY-TSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVED---- 217 (267)
T ss_dssp TGGGGBCCHHH-HSTTSTTCCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH----
T ss_pred ccccccccccc-cccccccccccccChh-hhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHH----
Confidence 99987654321 1122345788999995 4456678999999999999999999 8999863211 111100
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
+... ..... +...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 218 ----i~~~-~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 218 ----ISTG-FRLYK------------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----HHTT-CCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HhcC-CcCCC------------------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000 00000 01223567899999999999999999999999999875
No 182
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.6e-39 Score=351.08 Aligned_cols=257 Identities=19% Similarity=0.208 Sum_probs=189.9
Q ss_pred HHHHHh-hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHh-cCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFL-CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN-IRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~-~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|.+. +.||+|+||.||+|.+..+++.||+|+++. .....+|+.++.+ .+||||+++++++... +.+....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcEE
Confidence 456665 689999999999999999999999999862 3467788888744 5899999999986421 1335678
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC---CCce
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH---EMTA 554 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~---~~~~ 554 (741)
|+||||+++|+|.+++... ....+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+
T Consensus 135 ~lv~E~~~gg~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~ 203 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR--------GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAIL 203 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHHh--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccE
Confidence 9999999999999999743 124588999999999999999999999 9999999999999987 7899
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+++....... .....||+.|+|| |+..+..++.++|||||||++|||++|+.||.......... ..
T Consensus 204 kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~--- 275 (400)
T 1nxk_A 204 KLTDFGFAKETTSHNS---LTTPCYTPYYVAP-EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GM--- 275 (400)
T ss_dssp EECCCTTCEECC--------------CTTCCG-GGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-SH---
T ss_pred EEEecccccccCCCCc---cccCCCCCCccCH-hhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-HH---
Confidence 9999999987654322 2235689999999 55567789999999999999999999999996432211100 00
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
...+......... .....+...+.+++.+||+.||++|||+.|+++-
T Consensus 276 -----~~~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 276 -----KTRIRMGQYEFPN----------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -----HHHHHHTCCCCCT----------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----HHHHHcCcccCCC----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000000 0001234568899999999999999999999864
No 183
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=363.32 Aligned_cols=344 Identities=20% Similarity=0.203 Sum_probs=265.8
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.|.+|.++++|++|+|++|++++..+..|+++++ |
T Consensus 58 ~Ls~n~i~~i~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~----------L 126 (570)
T 2z63_A 58 DLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT----------L 126 (570)
T ss_dssp ECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTT----------C
T ss_pred ECCCCcCCccCccccc-CchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccccc----------c
Confidence 6788888754444444 7888888888888888777788888888888888888887655556777665 6
Q ss_pred cEEECcCCcCccc-CCchhhcccccccEEEccCCcccccCCcccc-----------------------------------
Q 037916 82 KHLDINNNNFGGL-LPGCICNFSITLETLIFNSNKIFRSIPAGIG----------------------------------- 125 (741)
Q Consensus 82 ~~L~Ls~N~l~~~-~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~----------------------------------- 125 (741)
++|+|++|.+++. .|..|.+++ +|++|++++|++.+..+..|.
T Consensus 127 ~~L~L~~n~l~~~~lp~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L 205 (570)
T 2z63_A 127 KELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKL 205 (570)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCT-TCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred cEEecCCCccceecChhhhcccC-CCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeE
Confidence 6666666666653 456666665 666666666655443333222
Q ss_pred --------------------------------------------------------------------------CCCCcc
Q 037916 126 --------------------------------------------------------------------------KFINLQ 131 (741)
Q Consensus 126 --------------------------------------------------------------------------~l~~L~ 131 (741)
.+++|+
T Consensus 206 ~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~ 285 (570)
T 2z63_A 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285 (570)
T ss_dssp EEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCS
T ss_pred ecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCccc
Confidence 234455
Q ss_pred EEEcccccccccCCccc------------------------------------------cCCCcCcEEEcccCCCCCcC-
Q 037916 132 TLHMWDNQLSGTISPAI------------------------------------------GELQNLVTLAINTNKLSGNI- 168 (741)
Q Consensus 132 ~L~L~~N~i~~~~~~~~------------------------------------------~~l~~L~~L~L~~N~l~~~~- 168 (741)
+|++++|.++++ |..+ ..+++|++|++++|++++..
T Consensus 286 ~L~l~~~~l~~l-~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 364 (570)
T 2z63_A 286 SFSLVSVTIERV-KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGC 364 (570)
T ss_dssp EEEEESCEECSC-CBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEE
T ss_pred EEEecCccchhh-hhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccc
Confidence 555555554432 2111 34567888888888887554
Q ss_pred -cccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCC-ccccccccceeEEEcCCCccCCCCChhhc
Q 037916 169 -PPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIP-PQLMDLTSLSVGLDLSRNQLVGSLPTEVG 246 (741)
Q Consensus 169 -~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~ 246 (741)
+..+.++++|++|++++|.+.+..+. |..+++|++|++++|++++..| ..+.++++|+. |++++|.+.+..|..|.
T Consensus 365 ~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~ 442 (570)
T 2z63_A 365 CSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY-LDISHTHTRVAFNGIFN 442 (570)
T ss_dssp EEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE-EECTTSCCEECCTTTTT
T ss_pred ccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE-EeCcCCcccccchhhhh
Confidence 67889999999999999999976555 9999999999999999997766 57889999998 99999999999999999
Q ss_pred CCCCCcEEEecccccc-chhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCc
Q 037916 247 KLINLEILFISRNMLE-CEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQN 325 (741)
Q Consensus 247 ~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 325 (741)
.+++|++|+|++|.++ +..|..|..+++|+.|++++|++++..|.+|..+++|+.|+|++|++++..|..|..+++|+.
T Consensus 443 ~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 9999999999999998 567899999999999999999999998999999999999999999999998899999999999
Q ss_pred ccccCcccccccCCcccc-CC--cccccccCCCCccccC
Q 037916 326 LNLSYNDLEGVIPTEGVF-KN--ASAISVFGNSKLCGGI 361 (741)
Q Consensus 326 L~l~~N~l~~~~~~~~~~-~~--~~~~~~~~n~~~c~~~ 361 (741)
|++++|++++.+|..... .. .....+.+.+ .|..+
T Consensus 523 L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 523 IWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp EECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred EEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 999999999988865332 11 1122344444 77655
No 184
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.5e-40 Score=348.73 Aligned_cols=280 Identities=20% Similarity=0.254 Sum_probs=198.1
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..+|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++ .....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----KKKKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----ecCCE
Confidence 45788999999999999999999999999999998643322 234567899999999999999999995 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.++.... ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 165 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFP----------NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165 (331)
T ss_dssp EEEEEECCSEEHHHHHHHST----------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCcchHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEE
Confidence 99999999998888876532 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc-
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV- 635 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~- 635 (741)
+|||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||....... .........
T Consensus 166 ~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (331)
T 4aaa_A 166 CDFGFARTLAAPGEV--YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLG 242 (331)
T ss_dssp CCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred EeCCCceeecCCccc--cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhC
Confidence 999999766543221 1224589999999666555578999999999999999999999986332111 111111110
Q ss_pred -CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 636 -LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 636 -~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
..+.....+............... ...........+++.+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 243 NLIPRHQELFNKNPVFAGVRLPEIK---EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp SCCHHHHHHHHHCGGGTTCCCCCCS---SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCChhhhhHhhhccccccccCcccc---ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011111111100000000000000 0000001112345678999999999999999999998863
No 185
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=342.96 Aligned_cols=265 Identities=21% Similarity=0.213 Sum_probs=191.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCcc---ccCCce
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVD---YKGDDF 476 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~---~~~~~~ 476 (741)
+|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+.+++++. ||||+++++++.... ......
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 4778899999999999999999899999999987555455667889999999995 999999999873211 134556
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeCCCCce
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~~~~~~ 554 (741)
.++||||+. |+|.+++... .....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~ 177 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTI 177 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCE
T ss_pred EEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCE
Confidence 899999995 7999888632 1124589999999999999999999999 8 9999999999999999999
Q ss_pred EEeecccccccCCCCccc----------ccccccccccccCccccc--CCCCCCCccCchhHHHHHHHHHcCCCCCCccc
Q 037916 555 HVADFGLAKLLPPAHLQT----------SSIGVKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMF 622 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~----------~~~~~~gt~~y~aPEe~~--~~~~~~~~~DIwSlG~il~elltg~~p~~~~~ 622 (741)
||+|||.+.......... ......||+.|+|||.+. .+..++.++|||||||++|+|++|+.||....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 999999998765432211 111345899999996542 45678899999999999999999999986321
Q ss_pred cCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 623 EGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
... ......... .. ......+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~-----~~~~~~~~~------------~~------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 258 KLR-----IVNGKYSIP------------PH------------------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp -------------CCCC------------TT------------------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHH-----hhcCcccCC------------cc------------------cccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 110 000000000 00 0112336689999999999999999999999
Q ss_pred HHHHHHhhc
Q 037916 703 LQSIKSILL 711 (741)
Q Consensus 703 L~~i~~~~~ 711 (741)
|+.+.....
T Consensus 303 l~~~~~~~~ 311 (337)
T 3ll6_A 303 LQEIAAARN 311 (337)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhccC
Confidence 999987655
No 186
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.7e-40 Score=349.08 Aligned_cols=268 Identities=19% Similarity=0.314 Sum_probs=203.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-----CCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-----EGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
..|++.+.||+|+||.||+|.+. .+++.||+|+++.... .....+.+|+.++++++||||+++++++ ..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~ 99 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----SQ 99 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE-----CS
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE-----cc
Confidence 45788899999999999999886 3578899999874322 2334678999999999999999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
....++||||+++|+|.+++...+...........+++..++.++.|++.||.|||+. ||+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 5678999999999999999864211000001113468899999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 632 (741)
+||+|||.+................+|+.|+||| +..+..++.++||||+||++|+|++ |..||..... ....
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~ 250 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----EQVL 250 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----HHHH
T ss_pred EEECcCccccccccccccccccCCCCCCCccChh-hhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----HHHH
Confidence 9999999998665433222223345788999995 4456678999999999999999999 8899863211 1111
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
.. +........ ...++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 251 ~~--------~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 251 RF--------VMEGGLLDK-------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HH--------HHTTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HH--------HHcCCcCCC-------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 10 000000000 01334668899999999999999999999999988754
No 187
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=345.77 Aligned_cols=280 Identities=22% Similarity=0.225 Sum_probs=196.1
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-----CcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-----GASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
...+|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ .
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 82 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF-----G 82 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE-----e
Confidence 34689999999999999999999998999999999874222 1235678999999999999999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCC
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~ 552 (741)
.....++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 83 ~~~~~~lv~e~~~~-~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~ 149 (346)
T 1ua2_A 83 HKSNISLVFDFMET-DLEVIIKDN---------SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENG 149 (346)
T ss_dssp CTTCCEEEEECCSE-EHHHHHTTC---------CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTC
T ss_pred eCCceEEEEEcCCC-CHHHHHHhc---------CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCC
Confidence 55688999999965 888888643 23577888999999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|..||...... ..+....
T Consensus 150 ~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~ 226 (346)
T 1ua2_A 150 VLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIF 226 (346)
T ss_dssp CEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred CEEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 9999999999876543221 223568999999966655566899999999999999999999998632111 1111111
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
..........+.+.....+.......... ............+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 227 ETLGTPTEEQWPDMCSLPDYVTFKSFPGI----PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHCCCCTTTSSSTTSSTTCCCCCCCCCC----CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHcCCCChhhhhhhccCcccccccccCCC----ChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11100000000000000000000000000 0000112334678899999999999999999999874
No 188
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=346.46 Aligned_cols=275 Identities=22% Similarity=0.333 Sum_probs=207.8
Q ss_pred HHHHHhhhcccCceeeEEEEEE----cCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGIL----DEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++++.||+|+||.||+|++ ..+++.||+|+++.......+.+.+|+.++++++||||+++++++.. .+..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCCC
Confidence 3578889999999999999994 56899999999976555556678899999999999999999998642 2344
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKH---------KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHS---------TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred ceEEEEECCCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEE
Confidence 689999999999999998643 23478899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+......... .......++..|+||| ...+..++.++||||+||++|+|++|..||...... +......
T Consensus 186 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~ 261 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE-SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 261 (326)
T ss_dssp ECCCTTCEECCSSCSEEECSSCCSCCGGGCCHH-HHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCT
T ss_pred EecCcchhhccccccccccccCCCCceeEECch-hhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhcc
Confidence 9999999877654321 1122244778899995 445567889999999999999999999987522110 0000000
Q ss_pred cCCcc-----hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 635 VLPDH-----VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 635 ~~~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
..... ..+.+..... ...+..++..+.+++.+||+.||++|||+.||++.|+++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 262 DKQGQMIVFHLIELLKNNGR------------------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TCCTHHHHHHHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHhhcCCC------------------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00000 0011110000 011123456788999999999999999999999999999876
Q ss_pred hc
Q 037916 710 LL 711 (741)
Q Consensus 710 ~~ 711 (741)
+.
T Consensus 324 l~ 325 (326)
T 2w1i_A 324 MA 325 (326)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 189
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=352.89 Aligned_cols=255 Identities=18% Similarity=0.165 Sum_probs=197.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++++.||+|+||.||+|+++.+++.||+|+++.. .....+.+.+|..++..++||||++++++ +.+...
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~-----~~~~~~ 135 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA-----FQDENY 135 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE-----EECSSE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE-----EeeCCE
Confidence 4577888999999999999999999999999999742 22334568899999999999999999999 456678
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~---------~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL 203 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKF---------GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRL 203 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHH---------SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEcCCCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEE
Confidence 99999999999999998632 13588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccC------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
+|||+++......... .....||+.|+|||.+.. ...++.++||||+||++|||++|+.||..... ..
T Consensus 204 ~DFGla~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~ 277 (412)
T 2vd5_A 204 ADFGSCLKLRADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----AE 277 (412)
T ss_dssp CCCTTCEECCTTSCEE-CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HH
T ss_pred eechhheeccCCCccc-cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----HH
Confidence 9999998765443221 223569999999965542 45789999999999999999999999863211 00
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCC---CCHHHHHH
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR---MNMTIVVH 701 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 701 (741)
... .+.......... ......+..+.+++.+||. +|++| |+++|+++
T Consensus 278 ~~~--------~i~~~~~~~~~p---------------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYG--------KIVHYKEHLSLP---------------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHH--------HHHTHHHHCCCC-------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHH--------HHHhcccCcCCC---------------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 100 000000000000 0001234668899999999 99998 58888865
No 190
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.2e-40 Score=347.05 Aligned_cols=270 Identities=23% Similarity=0.338 Sum_probs=199.8
Q ss_pred HHHHHHHhhhcccCceeeEEEEE-----EcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGI-----LDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDY 471 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 471 (741)
....|++.+.||+|+||.||+|+ +..++..||+|++.... ......+.+|+.++++++||||+++++++
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 102 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS----- 102 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----
Confidence 34568899999999999999999 44578899999996322 23345678899999999999999999995
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC-
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH- 550 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~- 550 (741)
......|+||||+++++|.+++....... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~ 176 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPRP---SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 176 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCCS---SSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCS
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecC
Confidence 44557899999999999999997542211 1224588999999999999999999999 9999999999999984
Q ss_pred --CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcc
Q 037916 551 --EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMN 627 (741)
Q Consensus 551 --~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~ 627 (741)
+..+||+|||.+................||+.|+||| +..+..++.++|||||||++|+|++ |..||..... ..
T Consensus 177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~ 253 (327)
T 2yfx_A 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QE 253 (327)
T ss_dssp STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH
T ss_pred CCcceEEECccccccccccccccccCCCcCCCcceeCHh-HhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HH
Confidence 4469999999997654433322233345789999995 4455678999999999999999998 9999863211 01
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
....+... ..... ...++..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 254 ~~~~~~~~------------~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 254 VLEFVTSG------------GRMDP------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHHTT------------CCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcC------------CCCCC------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11111000 00000 0123456889999999999999999999999999888
Q ss_pred Hhhc
Q 037916 708 SILL 711 (741)
Q Consensus 708 ~~~~ 711 (741)
+...
T Consensus 304 ~~~~ 307 (327)
T 2yfx_A 304 QDPD 307 (327)
T ss_dssp HCHH
T ss_pred cCHH
Confidence 6443
No 191
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.2e-40 Score=352.27 Aligned_cols=270 Identities=20% Similarity=0.189 Sum_probs=184.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCc-cccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGV-DYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-~~~~~~~ 476 (741)
.+|++++.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++... .......
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 46889999999999999999999999999999986422 22345677999999999999999999997542 1223356
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+|||++ +++|.+++.. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL 173 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-----------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKI 173 (367)
T ss_dssp CEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred EEEEeccc-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEE
Confidence 89999999 7899988852 3488999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++..... .....||+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+........
T Consensus 174 ~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g 247 (367)
T 2fst_X 174 LDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVG 247 (367)
T ss_dssp CC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHC
T ss_pred eecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 999999865432 223568999999976655578999999999999999999999998632111 11111111110
Q ss_pred Cc-----------chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PD-----------HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~-----------~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+ ....++......... ..........+.+.+|+.+||..||++|||+.|+++-
T Consensus 248 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 248 TPGAELLKKISSESARNYIQSLTQMPKM------------NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp SCCHHHHTTCCCHHHHHHHHTSCCCCCC------------CHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHHhhhHHHHHHHhccCCCCCC------------CHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 011111100000000 0000111234668899999999999999999999863
No 192
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.5e-39 Score=334.28 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=203.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|+.++++++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 84 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYI 84 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEE
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcEE
Confidence 45788899999999999999987 67789999997432 34567889999999999999999999852 235799
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 153 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTP--------SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153 (279)
T ss_dssp EEECCTTCBHHHHTTSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCC
Confidence 99999999999998632 113588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+.......... .....+++.|+||| ...+..++.++||||+||++|||++ |+.||...... ........
T Consensus 154 g~~~~~~~~~~~~-~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~---- 225 (279)
T 1qpc_A 154 GLARLIEDNEYTA-REGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLER---- 225 (279)
T ss_dssp TTCEECSSSCEEC-CTTCCCCTTTSCHH-HHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT----
T ss_pred cccccccCccccc-ccCCCCccCccChh-hhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhc----
Confidence 9998765443221 22344788999995 4456678999999999999999999 89998632111 00000000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
...... ...+++.+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 226 --------~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 226 --------GYRMVR------------------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp --------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred --------ccCCCC------------------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 000000 01234678899999999999999999999999999987654
No 193
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-39 Score=345.80 Aligned_cols=270 Identities=21% Similarity=0.280 Sum_probs=203.5
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCe-----EEEEEEeeccCc-CcchhHHHHHHHHHhc-CCCceeeEeeeecCccccC
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKT-----IIAVKVLNLLHH-GASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~-----~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 473 (741)
.|.+.+.||+|+||.||+|.+..++. .||+|+++.... ...+.+.+|+.+++++ +||||+++++++ ..
T Consensus 47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~~ 121 (333)
T 2i1m_A 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC-----TH 121 (333)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CS
T ss_pred HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----ec
Confidence 46778899999999999999975554 799999974322 2345678999999999 899999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCC----CcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGA----DKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD 549 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~ 549 (741)
....++||||+++|+|.+++...... .........+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 55789999999999999998642100 00000123578999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcch
Q 037916 550 HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNL 628 (741)
Q Consensus 550 ~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~ 628 (741)
.++.+||+|||++................+|+.|+||| ...+..++.++|||||||++|+|++ |..||....... .+
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 276 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KF 276 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHH-HhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HH
Confidence 99999999999998664433322233345788999995 4456678999999999999999998 999986321111 11
Q ss_pred hhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 629 HNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 629 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
. ........... +..+++.+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 277 ~------------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 277 Y------------KLVKDGYQMAQ------------------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp H------------HHHHHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H------------HHHhcCCCCCC------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1 11111100000 01224568899999999999999999999999998876
Q ss_pred hh
Q 037916 709 IL 710 (741)
Q Consensus 709 ~~ 710 (741)
..
T Consensus 327 ~~ 328 (333)
T 2i1m_A 327 ED 328 (333)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 194
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.9e-40 Score=361.61 Aligned_cols=249 Identities=20% Similarity=0.221 Sum_probs=189.7
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
...|++++.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ ....
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeCC
Confidence 35688999999999999999999999999999999742 233345677899999999999999999995 4556
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCeEeCCCCce
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH-DCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ . ||+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRE----------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCE
Confidence 899999999999999988633 458899999999999999999998 8 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+........ .....||+.|+||| +..+..++.++||||+||++|||++|+.||..... .....
T Consensus 289 kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~- 359 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGAT--MKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFE- 359 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHH-HHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EEccCCCceeccCCCcc--cccccCCccccCHh-hcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHH-
Confidence 99999999864433221 22356999999995 55677899999999999999999999999863211 00100
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 701 (741)
.+...... . +....+.+.+++.+||+.||++|| |+.|+++
T Consensus 360 -------~i~~~~~~--~------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 360 -------LILMEEIR--F------------------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -------HHHHCCCC--C------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------HHHhCCCC--C------------------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00000000 0 012245678999999999999999 9999986
No 195
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-39 Score=346.30 Aligned_cols=249 Identities=26% Similarity=0.286 Sum_probs=195.6
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
...|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ ..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 127 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY-----LREH 127 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETT
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 35688899999999999999999889999999999743322 234678999999999999999999995 4456
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+. |++.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 194 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEVH---------KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVK 194 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEE
T ss_pred eEEEEEecCC-CCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEE
Confidence 8999999996 6888877522 24588999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCccccc--CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~--~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
|+|||++...... ....||+.|+|||.+. ....++.++|||||||++|||++|+.||....... .......
T Consensus 195 L~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~ 267 (348)
T 1u5q_A 195 LGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ 267 (348)
T ss_dssp ECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred EeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHh
Confidence 9999999765432 2246899999996553 35678999999999999999999999986321100 0000100
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
...+. .. ....++.+.+++.+||+.||++|||+.|+++.
T Consensus 268 ~~~~~---------~~---------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 268 NESPA---------LQ---------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp SCCCC---------CC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred cCCCC---------CC---------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00 00223567899999999999999999999864
No 196
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4e-39 Score=345.71 Aligned_cols=198 Identities=28% Similarity=0.341 Sum_probs=168.5
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-----CCceeeEeeeecCccccC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-----HKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----hpnIv~~~~~~~~~~~~~ 473 (741)
..+|+++++||+|+||.||+|++..+++.||+|+++.. .........|+.+++.+. ||||+++++++ ..
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~-----~~ 107 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF-----MY 107 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE-----EE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccccee-----eE
Confidence 35688999999999999999999989999999999632 233456678999999886 99999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC---
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH--- 550 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~--- 550 (741)
....++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+. ||+||||||+|||++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNN--------YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 56899999999 899999987431 13488899999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHH
Q 037916 551 ----------------------EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILL 608 (741)
Q Consensus 551 ----------------------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il 608 (741)
++.+||+|||++....... ....||+.|+|| |+..+..++.++||||+||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAP-EVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCH-HHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCc-HHHcCCCCCCccchHHHHHHH
Confidence 7899999999998654322 234689999999 555677899999999999999
Q ss_pred HHHHcCCCCCCc
Q 037916 609 LELMTRKRPSDI 620 (741)
Q Consensus 609 ~elltg~~p~~~ 620 (741)
|+|++|+.||..
T Consensus 250 ~ell~g~~pf~~ 261 (360)
T 3llt_A 250 AELYTGSLLFRT 261 (360)
T ss_dssp HHHHHSSCSCCC
T ss_pred HHHHHCCCCCCC
Confidence 999999999963
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.9e-39 Score=359.41 Aligned_cols=258 Identities=19% Similarity=0.235 Sum_probs=197.7
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+...|+++++||+|+||.||+|++..++..||+|+++... ......+.+|+.+++.++||||++++++| .+..
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 109 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKR 109 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence 4567999999999999999999999999999999997432 33456788999999999999999999995 4566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC---C
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---M 552 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~---~ 552 (741)
..|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.. +
T Consensus 110 ~~~lv~e~~~~g~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 176 (494)
T 3lij_A 110 NYYLVMECYKGGELFDEIIHR----------MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDA 176 (494)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTC
T ss_pred EEEEEEecCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCC
Confidence 899999999999999887532 4588999999999999999999999 99999999999999764 4
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||++........ .....||+.|+|||.+ . ..++.++||||+||++|+|++|..||...... .+...+
T Consensus 177 ~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i 249 (494)
T 3lij_A 177 LIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVL-R-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKV 249 (494)
T ss_dssp CEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred cEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHH-c-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 699999999987654332 2235699999999654 3 56899999999999999999999998632111 110000
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH--HHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE--LQSIK 707 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 707 (741)
. ......... .....++.+.+++.+||+.||++|||+.|+++- +.+..
T Consensus 250 ~-----------~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 250 E-----------KGKYTFDSP----------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299 (494)
T ss_dssp H-----------HTCCCCCSG----------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred H-----------hCCCCCCch----------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence 0 000000000 001234567899999999999999999999864 44443
No 198
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-39 Score=333.50 Aligned_cols=255 Identities=23% Similarity=0.328 Sum_probs=197.6
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
...|++.+.||+|+||.||+|++. ++.||+|+++.... ...+.+.+|+.++++++||||+++++++.. .....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT---TTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc---CCCCC
Confidence 356888999999999999999995 88899999975332 234568899999999999999999999643 22367
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCCeEeCCCCce
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT--TAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDlkp~NIll~~~~~~ 554 (741)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~ 152 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGT--------NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTA 152 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCS--------SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCE
T ss_pred eEeeecccCCCcHHHHHhhcc--------cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcce
Confidence 899999999999999997431 13589999999999999999999998 8 9999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCC---CCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV---SINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~---~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+|+|||++..... ....||+.|+|||.+. +..+ +.++||||+||++|||++|+.||........ ...
T Consensus 153 ~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~-~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~- 222 (271)
T 3kmu_A 153 RISMADVKFSFQS-------PGRMYAPAWVAPEALQ-KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMK- 222 (271)
T ss_dssp EEEGGGSCCTTSC-------TTCBSCGGGSCHHHHH-SCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHH-
T ss_pred eEEeccceeeecc-------cCccCCccccChhhhc-cCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHH-
Confidence 9999988754322 1245899999996554 3333 3379999999999999999999863211110 000
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
.......... +..++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 223 -----------~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 223 -----------VALEGLRPTI------------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -----------HHHSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -----------HHhcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0000000000 01234568899999999999999999999999998753
No 199
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-39 Score=335.96 Aligned_cols=254 Identities=27% Similarity=0.336 Sum_probs=194.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+. ++.||+|+++.. ...+.+.+|+.++++++||||+++++++. ......++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~l 92 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 92 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCEE
T ss_pred hhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceEE
Confidence 46888899999999999999985 889999998742 34567889999999999999999999863 34457899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Df 161 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDF 161 (278)
T ss_dssp EECCCTTEEHHHHHHHH--------HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCCHHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeec
Confidence 99999999999998632 113378889999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|.+........ ...+++.|+||| ...+..++.++||||+|+++|+|++ |..||..... .........
T Consensus 162 g~~~~~~~~~~-----~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~- 229 (278)
T 1byg_A 162 GLTKEASSTQD-----TGKLPVKWTAPE-ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEK- 229 (278)
T ss_dssp CC-----------------CCTTTSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTT-
T ss_pred ccccccccccc-----CCCccccccCHH-HhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhc-
Confidence 99876543221 134788999995 4456678999999999999999998 9999863211 111111000
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
...... ...+++.+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 230 --------~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 230 --------GYKMDA------------------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp --------TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------CCCCCC------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 000000 1133467889999999999999999999999999998643
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.7e-39 Score=357.71 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=198.8
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc--CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+..+|++.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++ .+..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCC
Confidence 567899999999999999999999999999999999632 233456788999999999999999999994 5566
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC---CCC
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD---HEM 552 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~---~~~ 552 (741)
..|+||||+.+|+|.+++... ..+++..+..++.|++.||.|||+. ||+||||||+||+++ .++
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKR----------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTC
T ss_pred EEEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 899999999999999988533 4588999999999999999999999 999999999999995 456
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||++........ .....||+.|+|||.+ .+ .++.++||||+||++|+|++|..||..... .. ..
T Consensus 162 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~---~~ 231 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YD---IL 231 (486)
T ss_dssp CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGG-GS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HH
T ss_pred CEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHh-CC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HH---HH
Confidence 899999999986654322 2235699999999654 33 589999999999999999999999863211 00 00
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
. .+......... +.....++.+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~--------~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 232 K--------RVETGKYAFDL----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp H--------HHHHTCCCSCS----------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred H--------HHHhCCCCCCC----------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000000000 0011234567899999999999999999999874
No 201
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.3e-38 Score=358.16 Aligned_cols=317 Identities=21% Similarity=0.214 Sum_probs=268.9
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.|++|.++++|++|+|++|+|+ .+|.. .+++ |
T Consensus 58 ~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~----------L 123 (562)
T 3a79_B 58 SLSQNSISELRMPDIS-FLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMAS----------L 123 (562)
T ss_dssp ECCSSCCCCCCGGGTT-TCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTT----------C
T ss_pred ECCCCCccccChhhhc-cCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cccc----------C
Confidence 7899999965556666 9999999999999999999999999999999999999999 45554 5655 9
Q ss_pred cEEECcCCcCcccC-CchhhcccccccEEEccCCcccccCCccccCCCCc--cEEEcccccc--cccCCccccCCC----
Q 037916 82 KHLDINNNNFGGLL-PGCICNFSITLETLIFNSNKIFRSIPAGIGKFINL--QTLHMWDNQL--SGTISPAIGELQ---- 152 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~-~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~L~~N~i--~~~~~~~~~~l~---- 152 (741)
++|+|++|++++.. |..|.+++ +|++|+|++|++... .+..+++| ++|+|++|++ ++..+..|..+.
T Consensus 124 ~~L~Ls~N~l~~l~~p~~~~~l~-~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l 199 (562)
T 3a79_B 124 RHLDLSFNDFDVLPVCKEFGNLT-KLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL 199 (562)
T ss_dssp SEEECCSSCCSBCCCCGGGGGCT-TCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE
T ss_pred CEEECCCCCccccCchHhhcccC-cccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceE
Confidence 99999999999754 68899998 999999999999764 34445555 9999999998 666666665543
Q ss_pred -----------------------------------------------------------------------------cCc
Q 037916 153 -----------------------------------------------------------------------------NLV 155 (741)
Q Consensus 153 -----------------------------------------------------------------------------~L~ 155 (741)
+|+
T Consensus 200 ~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~ 279 (562)
T 3a79_B 200 HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVE 279 (562)
T ss_dssp EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEE
T ss_pred EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccccc
Confidence 677
Q ss_pred EEEcccCCCCCcCcccc-----------------------------------------------------cCCcccceee
Q 037916 156 TLAINTNKLSGNIPPSI-----------------------------------------------------GNLKKLLQLY 182 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~-----------------------------------------------------~~l~~L~~L~ 182 (741)
+|++++|++++.+|..+ ..+++|++|+
T Consensus 280 ~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ 359 (562)
T 3a79_B 280 YLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLN 359 (562)
T ss_dssp EEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEE
T ss_pred EEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEE
Confidence 78888888876666654 6788999999
Q ss_pred ccCcccccccCcccccCCCCCEEeccCccccc--cCCccccccccceeEEEcCCCccCCCCC-hhhcCCCCCcEEEeccc
Q 037916 183 LIENFLQVSIPSSLGQCQSLTTINLSYNNLSG--TIPPQLMDLTSLSVGLDLSRNQLVGSLP-TEVGKLINLEILFISRN 259 (741)
Q Consensus 183 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N 259 (741)
|++|.+++..|..|..+++|++|+|++|++++ .+|..|.++++|+. |+|++|++++.+| ..|..+++|++|+|++|
T Consensus 360 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~-L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n 438 (562)
T 3a79_B 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET-LDVSLNSLNSHAYDRTCAWAESILVLNLSSN 438 (562)
T ss_dssp CCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCE-EECTTSCCBSCCSSCCCCCCTTCCEEECCSS
T ss_pred CCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCE-EECCCCcCCCccChhhhcCcccCCEEECCCC
Confidence 99999999899999999999999999999995 33467899999998 9999999998444 56899999999999999
Q ss_pred cccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 260 MLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 260 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
++++..+..+. ++|+.|+|++|+|+. +|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|++++..+.
T Consensus 439 ~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 439 MLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 99876665544 789999999999994 565566999999999999999965555599999999999999999987664
Q ss_pred c
Q 037916 340 E 340 (741)
Q Consensus 340 ~ 340 (741)
.
T Consensus 516 ~ 516 (562)
T 3a79_B 516 I 516 (562)
T ss_dssp H
T ss_pred H
Confidence 3
No 202
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-38 Score=360.09 Aligned_cols=178 Identities=19% Similarity=0.201 Sum_probs=159.2
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.|++|.++++|++|+|++|++++..|..|.++++ |
T Consensus 32 ~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~----------L 100 (549)
T 2z81_A 32 DLSFNKITYIGHGDLR-ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSS----------L 100 (549)
T ss_dssp ECCSSCCCEECSSTTS-SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTT----------C
T ss_pred ECcCCccCccChhhhh-cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCC----------C
Confidence 7899999977777776 8999999999999999999999999999999999999999887778999876 9
Q ss_pred cEEECcCCcCccc-CCchhhcccccccEEEccCCc-ccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 82 KHLDINNNNFGGL-LPGCICNFSITLETLIFNSNK-IFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 82 ~~L~Ls~N~l~~~-~~~~~~~l~~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
++|+|++|++++. .|..+..+. +|++|++++|+ +....+..|.++++|++|+|++|++++..|..|..+++|++|++
T Consensus 101 ~~L~Ls~n~l~~~~~~~~~~~l~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 101 KYLNLMGNPYQTLGVTSLFPNLT-NLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp CEEECTTCCCSSSCSSCSCTTCT-TCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred cEEECCCCcccccchhhhhhccC-CccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEec
Confidence 9999999999974 567888888 99999999998 54555578999999999999999999999999999999999999
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccc
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVS 191 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 191 (741)
++|.+....+..+..+++|++|++++|.+++.
T Consensus 180 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 180 HLSESAFLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp ECSBSTTHHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred ccCcccccchhhHhhcccccEEEccCCccccc
Confidence 99999854444456799999999999998863
No 203
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.3e-41 Score=351.87 Aligned_cols=269 Identities=22% Similarity=0.301 Sum_probs=183.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHh--cCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN--IRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|++. ++.||+|+++. .....+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 35888999999999999999875 78899999863 334567778888877 79999999999964321 112378
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCeEeC
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH--------HDCQPTTAHCDLKPSNVLLD 549 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDlkp~NIll~ 549 (741)
++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+||+++
T Consensus 77 ~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~ 142 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 142 (303)
T ss_dssp EEEEECCTTCCHHHHHHH-----------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CC
T ss_pred EEEEeccCCCCHHHHHhc-----------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEEC
Confidence 999999999999999853 24677788999999999999999 77 999999999999999
Q ss_pred CCCceEEeecccccccCCCCccc--ccccccccccccCcccccCCC-----CCCCccCchhHHHHHHHHHcCCC------
Q 037916 550 HEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGLGS-----EVSINGDVYSYGILLLELMTRKR------ 616 (741)
Q Consensus 550 ~~~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~~~-----~~~~~~DIwSlG~il~elltg~~------ 616 (741)
.++.+||+|||++.......... ......||+.|+|||.+.... .++.++|||||||++|||++|..
T Consensus 143 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~ 222 (303)
T 3gxj_A 143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222 (303)
T ss_dssp TTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-
T ss_pred CCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccc
Confidence 99999999999997654432221 122246999999996543322 34478999999999999999944
Q ss_pred ----CCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCC
Q 037916 617 ----PSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQD 692 (741)
Q Consensus 617 ----p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 692 (741)
||............... ...+......... .....+++..+.+++.+||+.||++
T Consensus 223 ~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dP~~ 281 (303)
T 3gxj_A 223 DYQLPYYDLVPSDPSVEEMRK--------VVCEQKLRPNIPN-------------RWQSCEALRVMAKIMRECWYANGAA 281 (303)
T ss_dssp CCCCTTTTTCC-CCCCC-CHH--------HHTTSCCCCCCCG-------------GGGSSHHHHHHHHHHHTTCCSSGGG
T ss_pred eeeccccccCCCCccHHHHHH--------HHHHhhcCCCccc-------------cccchhhHHHHHHHHHHHhccCccc
Confidence 44322211111111111 1111111111110 0011256678999999999999999
Q ss_pred CCCHHHHHHHHHHHHHh
Q 037916 693 RMNMTIVVHELQSIKSI 709 (741)
Q Consensus 693 RPs~~evl~~L~~i~~~ 709 (741)
|||+.||++.|+++.+.
T Consensus 282 Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 282 RLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp SCCHHHHHHHHHC-CCC
T ss_pred CCCHHHHHHHHHHhhhh
Confidence 99999999999988754
No 204
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=334.38 Aligned_cols=262 Identities=23% Similarity=0.324 Sum_probs=204.0
Q ss_pred HHHHhh-hcccCceeeEEEEEEc--CCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 401 SFLFLC-WIDMGSFGSVYKGILD--EGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 401 ~y~~~~-~ig~G~~g~V~~a~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.|.+.+ .||+|+||.||+|.+. .++..||+|+++... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~ 83 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AEA 83 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSS
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CCC
Confidence 345555 8999999999999864 467889999997532 223566889999999999999999999952 235
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 151 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGK---------REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKI 151 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTC---------TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEE
T ss_pred cEEEEEeCCCCCHHHHHHhC---------CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEE
Confidence 89999999999999998632 24588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 557 ADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
+|||.+......... .......+|+.|+||| +..+..++.++||||+||++|+|++ |+.||..... ......+..
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~ 228 (287)
T 1u59_A 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ 228 (287)
T ss_dssp CCCTTCEECTTCSCEECCCCSSCCCGGGCCHH-HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHT
T ss_pred CcccceeeeccCcceeeccccccccccccCHH-HhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhc
Confidence 999999877543321 1222344788999995 4456678999999999999999998 9999863211 111111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCC
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGP 713 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 713 (741)
.. ... .+..+++.+.+++.+||+.||++|||+.|+++.|+.+..+...+
T Consensus 229 ~~------------~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 229 GK------------RME------------------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp TC------------CCC------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred CC------------cCC------------------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 00 000 01134567889999999999999999999999999999877644
No 205
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.4e-38 Score=340.65 Aligned_cols=314 Identities=18% Similarity=0.209 Sum_probs=240.2
Q ss_pred CCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCch
Q 037916 19 TLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGC 98 (741)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 98 (741)
.++++++|++++|.++.+.+..|..+++|++|+|++|++++..+..|..+++ |++|+|++|++++..|..
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~----------L~~L~L~~n~l~~~~~~~ 112 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHT----------IQKLYMGFNAIRYLPPHV 112 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTT----------CCEEECCSSCCCCCCTTT
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCC----------cCEEECCCCCCCcCCHHH
Confidence 3678888888888888766666778888888888888888777777877765 888888888888777777
Q ss_pred hhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCccc
Q 037916 99 ICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKL 178 (741)
Q Consensus 99 ~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 178 (741)
|..++ +|++|+|++|++....+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|++++. .+..+++|
T Consensus 113 ~~~l~-~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L 188 (390)
T 3o6n_A 113 FQNVP-LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSL 188 (390)
T ss_dssp TTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTC
T ss_pred hcCCC-CCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cccccccc
Confidence 77777 888888888888766666678888888888888888877777888888888888888888754 35667778
Q ss_pred ceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecc
Q 037916 179 LQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258 (741)
Q Consensus 179 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 258 (741)
+.|++++|.+++. ...++|++|++++|+++.. |..+ .++|+. |++++|.+++. ..+..+++|++|+|++
T Consensus 189 ~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~-L~l~~n~l~~~--~~l~~l~~L~~L~Ls~ 257 (390)
T 3o6n_A 189 FHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGPV--NVELTI-LKLQHNNLTDT--AWLLNYPGLVEVDLSY 257 (390)
T ss_dssp SEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECCC--CSSCCE-EECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred ceeeccccccccc-----CCCCcceEEECCCCeeeec-cccc--cccccE-EECCCCCCccc--HHHcCCCCccEEECCC
Confidence 8888888877642 3345788888888888743 3332 356776 88888888743 4677888888888888
Q ss_pred ccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccC
Q 037916 259 NMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 259 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 338 (741)
|.++++.+..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++..+
T Consensus 258 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~- 334 (390)
T 3o6n_A 258 NELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK- 334 (390)
T ss_dssp SCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC-
T ss_pred CcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC-
Confidence 88888778888888888888888888875 4555677788888888888887 45566777888888888888887764
Q ss_pred CccccCCcccccccCCCCccccC
Q 037916 339 TEGVFKNASAISVFGNSKLCGGI 361 (741)
Q Consensus 339 ~~~~~~~~~~~~~~~n~~~c~~~ 361 (741)
...++.++.+++.+|++.|...
T Consensus 335 -~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 335 -LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp -CCTTCCCSEEECCSSCEEHHHH
T ss_pred -chhhccCCEEEcCCCCccchhH
Confidence 3446778888888888877543
No 206
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.6e-39 Score=358.81 Aligned_cols=258 Identities=28% Similarity=0.424 Sum_probs=197.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
.|++.++||+|+||.||+|.+. .+..||||+++... ...+.+.+|+.++++++||||+++++++. + ...++|
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~-~~~~iv 256 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPIYIV 256 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSCEEE
T ss_pred HceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc-----C-CceEEE
Confidence 4677889999999999999997 45779999997533 33567899999999999999999999863 2 457999
Q ss_pred EecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecc
Q 037916 481 YEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560 (741)
Q Consensus 481 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg 560 (741)
|||+++|+|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 257 ~e~~~~gsL~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 325 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325 (452)
T ss_dssp ECCCTTCBHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred ehhhcCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCc
Confidence 9999999999999632 123478899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCcc
Q 037916 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPDH 639 (741)
Q Consensus 561 ~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (741)
+++....... .......++..|+||| ...+..++.++|||||||++|||++ |+.||...... +...
T Consensus 326 ~a~~~~~~~~-~~~~~~~~~~~y~aPE-~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~------ 392 (452)
T 1fmk_A 326 LARLIEDNEY-TARQGAKFPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD------ 392 (452)
T ss_dssp TTC---------------CCGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH------
T ss_pred cceecCCCce-ecccCCcccccccCHh-HHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH------
Confidence 9987654322 1222344788999995 4456678999999999999999999 99998632111 0100
Q ss_pred hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 640 VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 640 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
.+...... ..+..+++.+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 393 ---~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 393 ---QVERGYRM------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp ---HHHTTCCC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred ---HHHcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 00000000 0012345678899999999999999999999999998875443
No 207
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.9e-39 Score=338.82 Aligned_cols=258 Identities=18% Similarity=0.222 Sum_probs=198.0
Q ss_pred HHHHHHHHHh-hhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhc-CCCceeeEeeeecCccc
Q 037916 396 ILLFVSFLFL-CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNI-RHKNLVKILTVCSGVDY 471 (741)
Q Consensus 396 ~~~~~~y~~~-~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~ 471 (741)
..+...|.+. +.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~----- 98 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY----- 98 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE-----
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE-----
Confidence 4566778887 889999999999999999999999999974332 2346778999999999 569999999994
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC-
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH- 550 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~- 550 (741)
......++||||+++|+|.+++... ....+++.+++.++.|++.||+|||+. ||+||||||+||+++.
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~ 167 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPE--------LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI 167 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSC--------C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence 5566899999999999999998532 124588999999999999999999999 9999999999999988
Q ss_pred --CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcch
Q 037916 551 --EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628 (741)
Q Consensus 551 --~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~ 628 (741)
++.+||+|||.+......... ....||+.|+|| |+..+..++.++||||+||++|+|++|+.||....... ..
T Consensus 168 ~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~ 242 (327)
T 3lm5_A 168 YPLGDIKIVDFGMSRKIGHACEL---REIMGTPEYLAP-EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TY 242 (327)
T ss_dssp TTBCCEEECCGGGCEEC------------CCCGGGCCH-HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred CCCCcEEEeeCccccccCCcccc---ccccCCcCccCC-eeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HH
Confidence 789999999999876543222 224689999999 55567788999999999999999999999986321110 00
Q ss_pred hhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 629 HNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 629 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.......... .. .....+++.+.+++.+||+.||++|||+.|+++-
T Consensus 243 ~~i~~~~~~~------------~~----------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 243 LNISQVNVDY------------SE----------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHTCCCC------------CT----------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHhccccc------------Cc----------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0000000000 00 0001234567899999999999999999999753
No 208
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.8e-38 Score=359.13 Aligned_cols=312 Identities=18% Similarity=0.205 Sum_probs=198.0
Q ss_pred CCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchh
Q 037916 20 LPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCI 99 (741)
Q Consensus 20 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 99 (741)
+++++.|++++|.++.+.+..|.++++|++|+|++|.|++..|..|..+++ |++|+|++|.|++..|..|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~----------L~~L~L~~n~l~~~~~~~~ 119 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHT----------IQKLYMGFNAIRYLPPHVF 119 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTT----------CCEEECCSSCCCCCCTTTT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCC----------CCEEECCCCcCCCCCHHHH
Confidence 466667777777666665556666667777777777776666666666654 6777777777766666666
Q ss_pred hcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccc
Q 037916 100 CNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLL 179 (741)
Q Consensus 100 ~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 179 (741)
..++ +|++|+|++|.|....+..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|++++.. +..+++|+
T Consensus 120 ~~l~-~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~ 195 (597)
T 3oja_B 120 QNVP-LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLF 195 (597)
T ss_dssp TTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCS
T ss_pred cCCC-CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhh
Confidence 6666 6777777777666555555666667777777777776666666666677777777777666542 44456666
Q ss_pred eeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRN 259 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 259 (741)
.|++++|.+++ +...++|+.|++++|.++...+ .+. ++|+. |+|++|.+++ +..++.+++|+.|+|++|
T Consensus 196 ~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~-~~~--~~L~~-L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N 264 (597)
T 3oja_B 196 HANVSYNLLST-----LAIPIAVEELDASHNSINVVRG-PVN--VELTI-LKLQHNNLTD--TAWLLNYPGLVEVDLSYN 264 (597)
T ss_dssp EEECCSSCCSE-----EECCTTCSEEECCSSCCCEEEC-SCC--SCCCE-EECCSSCCCC--CGGGGGCTTCSEEECCSS
T ss_pred hhhcccCcccc-----ccCCchhheeeccCCccccccc-ccC--CCCCE-EECCCCCCCC--ChhhccCCCCCEEECCCC
Confidence 66666666653 2234566666666666663322 221 35555 6666666664 345666666666666666
Q ss_pred cccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 260 MLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 260 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
.++++.+..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++.+.
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~- 341 (597)
T 3oja_B 265 ELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL- 341 (597)
T ss_dssp CCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-
T ss_pred ccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh-
Confidence 6666666666666666666666666664 3445555666666666666666 345556666666666666666665532
Q ss_pred ccccCCcccccccCCCCcccc
Q 037916 340 EGVFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 340 ~~~~~~~~~~~~~~n~~~c~~ 360 (741)
..++.+..+++.+|++.|.+
T Consensus 342 -~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 342 -STHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp -CTTCCCSEEECCSSCEEHHH
T ss_pred -hhcCCCCEEEeeCCCCCChh
Confidence 33566666666666666643
No 209
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4e-39 Score=334.24 Aligned_cols=249 Identities=17% Similarity=0.232 Sum_probs=195.7
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
+...|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+..+..+ +||||+++++++ ...
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AED 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EET
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecC
Confidence 4578999999999999999999999899999999997432 22345677899999998 999999999995 445
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC---
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE--- 551 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~--- 551 (741)
...++||||+++++|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~ 154 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENY------RIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIP 154 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHH------HHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----
T ss_pred CeEEEEEEecCCCcHHHHHHhhc------ccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCC
Confidence 68999999999999999986321 0114578999999999999999999999 99999999999999844
Q ss_pred ----------------CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCC
Q 037916 552 ----------------MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615 (741)
Q Consensus 552 ----------------~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~ 615 (741)
..+||+|||.+........ ..||+.|+|||.+.....++.++||||+||++|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 155 NAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ---------------CCCEEECCCTTCEETTCSCC------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccccccccCCceEEEEcccccccccCCccc------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 4799999999987654321 348999999976655557778999999999999999998
Q ss_pred CCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCC
Q 037916 616 RPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMN 695 (741)
Q Consensus 616 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 695 (741)
.|+... ...........+ ... ..+++.+.+++.+||+.||++|||
T Consensus 229 ~~~~~~----~~~~~~~~~~~~------------~~~-------------------~~~~~~~~~li~~~l~~dp~~Rps 273 (289)
T 1x8b_A 229 PLPRNG----DQWHEIRQGRLP------------RIP-------------------QVLSQEFTELLKVMIHPDPERRPS 273 (289)
T ss_dssp CCCSSS----HHHHHHHTTCCC------------CCS-------------------SCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCcch----hHHHHHHcCCCC------------CCC-------------------cccCHHHHHHHHHHhCCCcccCCC
Confidence 875411 111111111000 000 122456889999999999999999
Q ss_pred HHHHHH
Q 037916 696 MTIVVH 701 (741)
Q Consensus 696 ~~evl~ 701 (741)
+.|+++
T Consensus 274 ~~~ll~ 279 (289)
T 1x8b_A 274 AMALVK 279 (289)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999875
No 210
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.6e-39 Score=334.48 Aligned_cols=259 Identities=19% Similarity=0.289 Sum_probs=198.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++.+.||+|+||.||+|++.. ++..||+|+++... ....+.+.+|+.++++++||||+++++++. + .
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~ 85 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-----E-E 85 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-----S-S
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-----C-C
Confidence 467888999999999999999753 34579999987432 223567889999999999999999999853 2 3
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 153 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERN---------KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVK 153 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHH---------TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEE
T ss_pred CCEEEEecCCCCCHHHHHHhc---------cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEE
Confidence 468999999999999998632 24478899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||.+.......... .....+++.|+||| ...+..++.++|||||||++|+|++ |+.||...... ........
T Consensus 154 l~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~ 229 (281)
T 3cc6_A 154 LGDFGLSRYIEDEDYYK-ASVTRLPIKWMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEK 229 (281)
T ss_dssp ECCCCGGGCC----------CCCCCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHH
T ss_pred eCccCCCcccccccccc-cccCCCCcceeCch-hhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhc
Confidence 99999998765433221 12244788999995 4456678999999999999999998 99998632111 11111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
... ... +..+++.+.+++.+||..||++|||+.|+++.|+++.+..
T Consensus 230 ~~~-----------~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 230 GDR-----------LPK-------------------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp TCC-----------CCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC-----------CCC-------------------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 000 000 0123456889999999999999999999999999988654
No 211
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.1e-39 Score=330.81 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=191.2
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
...|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ ....
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCC
Confidence 456889999999999999999999899999999997432 23345788999999999999999999995 4556
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKH----------GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEE
Confidence 899999999999999998633 4578899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|+|||.+......... ....|++.|+|||.+......+.++||||+|+++|+|++|+.||..... .....
T Consensus 152 l~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~-- 221 (276)
T 2h6d_A 152 IADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFK-- 221 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--
T ss_pred EeecccccccCCCcce---ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHH--
Confidence 9999999876543221 2245899999996554444457899999999999999999999863211 11100
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+....... +......+.+++.+||+.||++|||+.|+++.
T Consensus 222 -------~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 222 -------KIRGGVFYI-------------------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -------HHHHCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------HhhcCcccC-------------------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000000 01223567899999999999999999999873
No 212
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-39 Score=361.31 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=198.7
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
.|++.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.+++.++||||++++++ +.+....
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~-----~~~~~~l 259 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA-----YETKDAL 259 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSSEE
T ss_pred ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEE-----EeeCCEE
Confidence 467778899999999999999999999999999742 22334567899999999999999999998 4556689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||++||+|.+++.... ...+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~--------~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~ 328 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMG--------QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRIS 328 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSS--------SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEE
Confidence 99999999999999986431 23488999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||++......... ....||+.|+||| +..+..++.++||||+||++|||++|+.||....... ......
T Consensus 329 DFGla~~~~~~~~~---~~~~GT~~Y~APE-vl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~----- 398 (576)
T 2acx_A 329 DLGLAVHVPEGQTI---KGRVGTVGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVE----- 398 (576)
T ss_dssp CCTTCEECCTTCCE---ECCCSCGGGCCHH-HHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHH-----
T ss_pred ecccceecccCccc---cccCCCccccCHH-HHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHH-----
Confidence 99999876544322 2246999999995 5566789999999999999999999999997432111 101010
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVH 701 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 701 (741)
..+..... .. +......+.+++.+||+.||++|| ++.||++
T Consensus 399 ----~~i~~~~~-~~------------------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 399 ----RLVKEVPE-EY------------------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----HHHHHCCC-CC------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----HHhhcccc-cC------------------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 00000000 00 012345678999999999999999 6788875
No 213
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-39 Score=335.87 Aligned_cols=259 Identities=22% Similarity=0.292 Sum_probs=199.9
Q ss_pred HHHHhh-hcccCceeeEEEEEE--cCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 401 SFLFLC-WIDMGSFGSVYKGIL--DEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 401 ~y~~~~-~ig~G~~g~V~~a~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
.|.+.+ .||+|+||.||+|.+ ..+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++ ...
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~------~~~ 90 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC------EAE 90 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE------ESS
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE------CCC
Confidence 466666 899999999999955 55678999999974322 2246788999999999999999999985 234
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..++||||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 157 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN----------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAK 157 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred CcEEEEEeCCCCCHHHHHHhC----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEE
Confidence 679999999999999998643 4578899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcc-cccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhh
Q 037916 556 VADFGLAKLLPPAHLQ-TSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 633 (741)
|+|||.+......... .......+++.|+|||. ..+..++.++||||+|+++|+|++ |+.||...... .......
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~ 234 (291)
T 1xbb_A 158 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLE 234 (291)
T ss_dssp ECCCTTCEECCTTCSEEEC----CCCGGGCCHHH-HHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHH
T ss_pred EccCCcceeeccCCCcccccccCCCCceeeChHH-hccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH
Confidence 9999999876544321 11222346788999954 456678899999999999999999 99998632111 1111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
... .... +..++..+.+++.+||+.||++|||+.|+++.|+++....+
T Consensus 235 ~~~------------~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 235 KGE------------RMGC------------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp TTC------------CCCC------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred cCC------------CCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 000 0000 01334678899999999999999999999999999986654
No 214
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=355.62 Aligned_cols=316 Identities=21% Similarity=0.269 Sum_probs=254.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|++.+..|..|. .+++|++|+|++|+|+++.|+.|.++++|++|+|++|+|+. +|.. .+++ |
T Consensus 27 ~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~----------L 92 (520)
T 2z7x_B 27 NISQNYISELWTSDIL-SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVN----------L 92 (520)
T ss_dssp ECCSSCCCCCCHHHHT-TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCC----------C
T ss_pred ECCCCcccccChhhcc-ccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCC----------c
Confidence 6899999965555665 89999999999999998889999999999999999999994 4444 5544 9
Q ss_pred cEEECcCCcCccc-CCchhhcccccccEEEccCCcccccCCccccCCCCc--cEEEcccccc--cccCCccccCCC----
Q 037916 82 KHLDINNNNFGGL-LPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINL--QTLHMWDNQL--SGTISPAIGELQ---- 152 (741)
Q Consensus 82 ~~L~Ls~N~l~~~-~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~L~~N~i--~~~~~~~~~~l~---- 152 (741)
++|+|++|++++. .|..|..+. +|++|++++|++.+ ..|..+++| ++|+|++|.+ ++..|..|..+.
T Consensus 93 ~~L~L~~N~l~~~~~p~~~~~l~-~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l 168 (520)
T 2z7x_B 93 KHLDLSFNAFDALPICKEFGNMS-QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESL 168 (520)
T ss_dssp SEEECCSSCCSSCCCCGGGGGCT-TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEE
T ss_pred cEEeccCCccccccchhhhccCC-cceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceE
Confidence 9999999999874 678888888 88888888888754 334444444 5555555555 333333333321
Q ss_pred -------------------------------------------------------------------------------c
Q 037916 153 -------------------------------------------------------------------------------N 153 (741)
Q Consensus 153 -------------------------------------------------------------------------------~ 153 (741)
+
T Consensus 169 ~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 248 (520)
T 2z7x_B 169 HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTT 248 (520)
T ss_dssp EEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSS
T ss_pred EEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCc
Confidence 4
Q ss_pred CcEEEcccCCCCCcCcccc-----------------------------------------------------cCCcccce
Q 037916 154 LVTLAINTNKLSGNIPPSI-----------------------------------------------------GNLKKLLQ 180 (741)
Q Consensus 154 L~~L~L~~N~l~~~~~~~~-----------------------------------------------------~~l~~L~~ 180 (741)
|++|++++|++++.+|..+ ..+++|++
T Consensus 249 L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~ 328 (520)
T 2z7x_B 249 VWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLH 328 (520)
T ss_dssp CSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccE
Confidence 4455555555544333332 67889999
Q ss_pred eeccCcccccccCcccccCCCCCEEeccCccccc--cCCccccccccceeEEEcCCCccCCCCCh-hhcCCCCCcEEEec
Q 037916 181 LYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSG--TIPPQLMDLTSLSVGLDLSRNQLVGSLPT-EVGKLINLEILFIS 257 (741)
Q Consensus 181 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls 257 (741)
|+|++|++++..|..|..+++|++|+|++|++++ .+|..+..+++|+. |+|++|.+.+.+|. .|..+++|++|+|+
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~-L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQ-LDISQNSVSYDEKKGDCSWTKSLLSLNMS 407 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCE-EECCSSCCBCCGGGCSCCCCTTCCEEECC
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCE-EECCCCcCCcccccchhccCccCCEEECc
Confidence 9999999998899999999999999999999996 56678999999998 99999999984554 58899999999999
Q ss_pred cccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccccc
Q 037916 258 RNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVI 337 (741)
Q Consensus 258 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 337 (741)
+|++++..+..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++++..
T Consensus 408 ~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 408 SNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp SSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 9999877776654 78999999999999 67777779999999999999999655555999999999999999999876
Q ss_pred CC
Q 037916 338 PT 339 (741)
Q Consensus 338 ~~ 339 (741)
+.
T Consensus 485 ~~ 486 (520)
T 2z7x_B 485 PR 486 (520)
T ss_dssp HH
T ss_pred Cc
Confidence 53
No 215
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.4e-39 Score=342.48 Aligned_cols=269 Identities=22% Similarity=0.308 Sum_probs=202.6
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEE--EEEEeecc-CcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTII--AVKVLNLL-HHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
+..|++.+.||+|+||.||+|++..++..+ |+|.++.. .....+.+.+|+.+++++ +||||+++++++ ...
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~ 98 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHR 98 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EET
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----eeC
Confidence 456888999999999999999998788765 99988742 233456788999999999 999999999995 455
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCc------ccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADK------TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll 548 (741)
...++||||+++++|.+++...+.... .......+++..++.++.|++.||.|||+. ||+||||||+||++
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~ 175 (327)
T 1fvr_A 99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 175 (327)
T ss_dssp TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEE
Confidence 689999999999999999975410000 001124688999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcc
Q 037916 549 DHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMN 627 (741)
Q Consensus 549 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~ 627 (741)
+.++.+||+|||++....... ......+++.|+||| +..+..++.++||||+||++|+|++ |..||.....
T Consensus 176 ~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---- 247 (327)
T 1fvr_A 176 GENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---- 247 (327)
T ss_dssp CGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHH-HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH----
T ss_pred cCCCeEEEcccCcCccccccc---cccCCCCCccccChh-hhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH----
Confidence 999999999999987443221 112234688999995 4456678999999999999999998 9999863211
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIK 707 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 707 (741)
....... ........ +..+++.+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 248 -~~~~~~~---------~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 248 -AELYEKL---------PQGYRLEK------------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp -HHHHHHG---------GGTCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHh---------hcCCCCCC------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111100 00000000 0123456889999999999999999999999999998
Q ss_pred Hhhc
Q 037916 708 SILL 711 (741)
Q Consensus 708 ~~~~ 711 (741)
+...
T Consensus 300 ~~~~ 303 (327)
T 1fvr_A 300 EERK 303 (327)
T ss_dssp HSSS
T ss_pred Hhhc
Confidence 7654
No 216
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.9e-39 Score=331.89 Aligned_cols=246 Identities=23% Similarity=0.265 Sum_probs=197.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++ .+...
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 88 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRKR 88 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCCE
Confidence 56888999999999999999999999999999996421 23346788999999999999999999995 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 155 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKI 155 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEE
T ss_pred EEEEEEeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEE
Confidence 99999999999999998633 4578999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+........ ....|++.|+||| +..+..++.++||||+|+++|+|++|..||...... ....
T Consensus 156 ~Dfg~~~~~~~~~~----~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--- 222 (284)
T 2vgo_A 156 ADFGWSVHAPSLRR----RTMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHR--- 222 (284)
T ss_dssp CCCTTCEECSSSCB----CCCCSCGGGCCHH-HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH---
T ss_pred ecccccccCccccc----ccccCCCCcCCHH-HhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHH---
Confidence 99999876543221 2346899999994 556677899999999999999999999998632111 0000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+...... . +...+..+.+++.+||+.||++|||+.|+++
T Consensus 223 -----~~~~~~~~--~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 223 -----RIVNVDLK--F------------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -----HHHTTCCC--C------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHhccccC--C------------------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 01000000 0 0122356789999999999999999999986
No 217
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.4e-39 Score=358.57 Aligned_cols=254 Identities=22% Similarity=0.254 Sum_probs=201.4
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
.+..+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ .+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~ 97 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----ED 97 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----EC
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence 35678999999999999999999999999999999996432 23456788999999999999999999994 55
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---CC
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DH 550 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll---~~ 550 (741)
....|+||||+.+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++ +.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 164 (484)
T 3nyv_A 98 KGYFYLVGEVYTGGELFDEIISR----------KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSK 164 (484)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTC----------SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSST
T ss_pred CCEEEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCC
Confidence 66899999999999999988643 4588999999999999999999999 99999999999999 46
Q ss_pred CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 551 EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 551 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
++.+||+|||++......... ....||+.|+|||.+ .+ .++.++||||+||++|+|++|..||..... .....
T Consensus 165 ~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~ 237 (484)
T 3nyv_A 165 DANIRIIDFGLSTHFEASKKM---KDKIGTAYYIAPEVL-HG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILK 237 (484)
T ss_dssp TCCEEECCTTHHHHBCCCCSH---HHHTTGGGTCCHHHH-HT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH
T ss_pred CCcEEEEeeeeeEEccccccc---ccCCCCccccCceee-cC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHH
Confidence 789999999999876544322 224599999999654 33 689999999999999999999999863211 11100
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+. ........ +.....++.+.+++.+||+.||++|||+.|+++-
T Consensus 238 ~i~-----------~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 238 KVE-----------KGKYTFEL----------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHH-----------HCCCCCCS----------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHH-----------cCCCCCCC----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000 00000000 0011234567899999999999999999999863
No 218
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1e-38 Score=357.78 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=196.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-------------CcchhHHHHHHHHHhcCCCceeeEeee
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-------------GASKSSIAECSALRNIRHKNLVKILTV 465 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~~~~~ 465 (741)
...|.++++||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 3568899999999999999999999999999999974321 234567899999999999999999999
Q ss_pred ecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCC
Q 037916 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545 (741)
Q Consensus 466 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~N 545 (741)
+ .+....|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|
T Consensus 115 ~-----~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N 176 (504)
T 3q5i_A 115 F-----EDKKYFYLVTEFYEGGELFEQIINR----------HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPEN 176 (504)
T ss_dssp E-----ECSSEEEEEEECCTTCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred E-----EcCCEEEEEEecCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHH
Confidence 4 5566899999999999999988532 4589999999999999999999999 99999999999
Q ss_pred eEeCCCC---ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccc
Q 037916 546 VLLDHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMF 622 (741)
Q Consensus 546 Ill~~~~---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~ 622 (741)
|+++.++ .+||+|||++......... ....||+.|+|||.+ . ..++.++||||+||++|+|++|..||....
T Consensus 177 il~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 177 ILLENKNSLLNIKIVDFGLSSFFSKDYKL---RDRLGTAYYIAPEVL-K-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp EEESSTTCCSSEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEEecCCCCccEEEEECCCCEEcCCCCcc---ccccCCcCCCCHHHh-c-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9998775 6999999999877554322 235699999999654 3 468999999999999999999999986321
Q ss_pred cCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 623 EGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
. ......+.. ...... .......++.+.+++.+||+.||++|||+.|+++-
T Consensus 252 ~--~~~~~~i~~-----------~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 252 D--QDIIKKVEK-----------GKYYFD----------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp H--HHHHHHHHH-----------CCCCCC----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H--HHHHHHHHc-----------CCCCCC----------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 011000000 000000 00011334668899999999999999999999863
No 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-38 Score=343.41 Aligned_cols=282 Identities=18% Similarity=0.150 Sum_probs=191.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCcc-ccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVD-YKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~~~~ 476 (741)
.+|++++.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.... ......
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 56889999999999999999999999999999997432 223456789999999999999999999975322 123347
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||++ ++|.+++. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 105 ~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 168 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 168 (371)
T ss_dssp EEEEEECCS-EEHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred eEEEEEcCC-CCHHHHHh------------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEE
Confidence 899999996 57888775 2378889999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||++........ .....||+.|+||| +..+..++.++||||+||++|+|++|+.||...... ..+........
T Consensus 169 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~ 243 (371)
T 2xrw_A 169 LDFGLARTAGTSFM---MTPYVVTRYYRAPE-VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLG 243 (371)
T ss_dssp CCCCC-------------------CTTCCHH-HHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CC
T ss_pred EEeecccccccccc---cCCceecCCccCHH-HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 99999986643321 22346899999995 455677899999999999999999999998632111 01111111100
Q ss_pred C----------cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 P----------DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
. ........................................+.+++.+||+.||++|||+.|+++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 00001110000000000000000000000001122346778999999999999999999999874
No 220
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.7e-39 Score=334.43 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=199.0
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.|++++.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ......++
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 97 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWI 97 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeEEE
Confidence 4778899999999999999999899999999997543 23456788999999999999999999995 34568999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++.. ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+||
T Consensus 98 v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 163 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADF 163 (303)
T ss_dssp EEECCTTEEHHHHHTT-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEeCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeec
Confidence 9999999999999852 3578999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDH 639 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (741)
|.+......... .....||+.|+|| |+..+..++.++|||||||++|+|++|+.||...... ..........+.
T Consensus 164 g~~~~~~~~~~~--~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~- 237 (303)
T 3a7i_A 164 GVAGQLTDTQIK--RNTFVGTPFWMAP-EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPP- 237 (303)
T ss_dssp TTCEECBTTBCC--BCCCCSCGGGCCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCC-
T ss_pred ccceecCccccc--cCccCCCcCccCH-HHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCC-
Confidence 999876543322 2235689999999 5556678899999999999999999999998632111 000000000000
Q ss_pred hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 640 VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 640 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
... ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 238 -------~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 -------TLE----------------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -------CCC----------------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -------CCc----------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 1223568899999999999999999999875
No 221
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5e-39 Score=347.65 Aligned_cols=288 Identities=16% Similarity=0.153 Sum_probs=200.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc--------
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY-------- 471 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-------- 471 (741)
.+|++.+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++.....
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 46889999999999999999999999999999986432 223479999999999999999999743221
Q ss_pred -------------------------cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHH
Q 037916 472 -------------------------KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526 (741)
Q Consensus 472 -------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 526 (741)
.+..+.++||||++ ++|.+.+.... .....+++..+..++.||+.||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI------RSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHH
Confidence 33456899999996 58777765210 11256889999999999999999
Q ss_pred HHHhcCCCCceecCCCCCCeEeC-CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHH
Q 037916 527 YLHHDCQPTTAHCDLKPSNVLLD-HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYG 605 (741)
Q Consensus 527 ~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG 605 (741)
|||+. ||+||||||+||+++ .++.+||+|||.|+........ ....||+.|+|||.+.....++.++||||+|
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 99999 999999999999997 6889999999999876544322 2245899999996665556799999999999
Q ss_pred HHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcc
Q 037916 606 ILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVAC 685 (741)
Q Consensus 606 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 685 (741)
|++|||++|+.||...... ..+...+.....+....+.... ......... ...........+...+..+.+++.+|
T Consensus 230 ~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~ 305 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMN--PHYTEVRFP-TLKAKDWRKILPEGTPSLAIDLLEQI 305 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHC--TTC--CCCC-CCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhC--cccccccCC-ccCcccHHhhCCCCCCHHHHHHHHHH
Confidence 9999999999998632111 1122222211111111111000 000000000 00000000001112456688999999
Q ss_pred cccCCCCCCCHHHHHHH--HHHHHH
Q 037916 686 SMESPQDRMNMTIVVHE--LQSIKS 708 (741)
Q Consensus 686 l~~dP~~RPs~~evl~~--L~~i~~ 708 (741)
|++||++|||+.|+++- +++++.
T Consensus 306 L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 306 LRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred ccCChhhCCCHHHHhcCHHHHHHHh
Confidence 99999999999999853 555554
No 222
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.2e-39 Score=334.60 Aligned_cols=248 Identities=20% Similarity=0.227 Sum_probs=197.9
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
+|.+.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++ .+....
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~ 90 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDNDFV 90 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccCCEE
Confidence 47788999999999999999999999999999874322 2345678899999999999999999995 456689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++++|.+++... ..+++.++..++.|+++||+|||+. ||+||||||+||+++.++.+||+
T Consensus 91 ~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 157 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR----------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 157 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEE
Confidence 9999999999999988532 4588999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||.+......... .....||+.|+||| +..+..++.++||||+|+++|+|++|+.||...... ....
T Consensus 158 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~---- 225 (294)
T 2rku_A 158 DFGLATKVEYDGER--KKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL---- 225 (294)
T ss_dssp CCTTCEECCSTTCC--BCCCCSCCSSCCHH-HHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH----
T ss_pred eccCceecccCccc--cccccCCCCcCCcc-hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH----
Confidence 99999876533221 22356899999995 556677899999999999999999999998632111 0000
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+...... . +......+.+++.+||+.||++|||+.|+++.
T Consensus 226 ----~~~~~~~~-~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 226 ----RIKKNEYS-I-------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----HHHTTCCC-C-------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----HHhhccCC-C-------------------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000000 0 01223457899999999999999999999874
No 223
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.9e-39 Score=355.87 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=195.6
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
.|.+.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++++++||||++++++ +......
T Consensus 186 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~-----~~~~~~l 260 (543)
T 3c4z_A 186 WFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA-----FETKTDL 260 (543)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSSEE
T ss_pred heEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEE-----EeeCCEE
Confidence 4556677999999999999999899999999997432 2334567899999999999999999998 4556689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||++||+|.+++..... ....+++..++.++.||+.||.|||+. ||+||||||+||+++.+|.+||+
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~------~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~ 331 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDE------DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRIS 331 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSST------TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEeccCCCHHHHHHHhhc------ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEe
Confidence 999999999999999864321 124588999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||+++........ .....||+.|+|| |+..+..++.++||||+||++|||++|+.||....... ....+..
T Consensus 332 DFGla~~~~~~~~~--~~~~~GT~~Y~AP-E~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~---- 403 (543)
T 3c4z_A 332 DLGLAVELKAGQTK--TKGYAGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ---- 403 (543)
T ss_dssp CCTTCEECCTTCCC--BCCCCSCTTTSCH-HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHH----
T ss_pred ecceeeeccCCCcc--cccccCCccccCh-hhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHH----
Confidence 99999876544322 2234699999999 45566789999999999999999999999996332111 1111111
Q ss_pred cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH
Q 037916 638 DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM 696 (741)
Q Consensus 638 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 696 (741)
.+...... .+...+..+.+++.+||+.||++||++
T Consensus 404 ----~i~~~~~~--------------------~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 404 ----RVLEQAVT--------------------YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ----HHHHCCCC--------------------CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ----HHhhcccC--------------------CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 01110000 001234567899999999999999976
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=334.00 Aligned_cols=257 Identities=22% Similarity=0.271 Sum_probs=196.2
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC----cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH----HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
+..+|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. .+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EE 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C-
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CC
Confidence 3467999999999999999999999899999999997432 2335678899999999999999999998632 34
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
....++||||++++ +.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~ 147 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSV--------PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGT 147 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHS--------TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred CCeEEEEehhccCC-HHHHHHhC--------cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCc
Confidence 55789999999765 76766532 124588999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCC-CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLG-SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~-~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
+||+|||.+................||+.|+|||.+... ..++.++||||+||++|+|++|+.||.... .....
T Consensus 148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~ 222 (305)
T 2wtk_C 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLF 222 (305)
T ss_dssp EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHH
T ss_pred EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHH
Confidence 999999999876543333333345689999999654332 234789999999999999999999986321 11111
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.. +..... . .+..++..+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~--------i~~~~~-~-------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 223 EN--------IGKGSY-A-------------------IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HH--------HHHCCC-C-------------------CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HH--------HhcCCC-C-------------------CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 000000 0 001234567899999999999999999999874
No 225
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.6e-39 Score=341.40 Aligned_cols=249 Identities=20% Similarity=0.225 Sum_probs=198.3
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.+|.+.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++ .+...
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 115 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDNDF 115 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCe
Confidence 357788999999999999999999999999999974322 2345678899999999999999999995 45668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++++|.+++... ..+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 116 ~~lv~e~~~~~~L~~~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl 182 (335)
T 2owb_A 116 VFVVLELCRRRSLLELHKRR----------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKI 182 (335)
T ss_dssp EEEEECCCTTCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEE
Confidence 99999999999999988632 4588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+......... .....||+.|+||| +..+..++.++|||||||++|+|++|+.||...... ....
T Consensus 183 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--- 251 (335)
T 2owb_A 183 GDFGLATKVEYDGER--KKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL--- 251 (335)
T ss_dssp CCCTTCEECCSTTCC--BCCCCSCCSSCCHH-HHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH---
T ss_pred eeccCceecccCccc--ccccCCCccccCHH-HhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHH---
Confidence 999999876533221 22356899999995 445667899999999999999999999998632110 0000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+...... .+......+.+++.+||+.||++|||+.|+++.
T Consensus 252 -----~~~~~~~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 252 -----RIKKNEYS--------------------IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -----HHHHTCCC--------------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----HHhcCCCC--------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000 001223457799999999999999999999874
No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=361.17 Aligned_cols=257 Identities=23% Similarity=0.322 Sum_probs=198.3
Q ss_pred hcccCceeeEEEEEEc--CCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEEEec
Q 037916 407 WIDMGSFGSVYKGILD--EGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEF 483 (741)
Q Consensus 407 ~ig~G~~g~V~~a~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv~e~ 483 (741)
+||+|+||.||+|.++ .++..||||+++... ....+.+.+|+.++++++|||||+++++|. . ...++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~-----~-~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----A-EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----S-SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec-----c-CCeEEEEEe
Confidence 6999999999999875 456789999997543 234577899999999999999999999963 2 358999999
Q ss_pred ccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 484 MHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 484 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 417 ~~~g~L~~~l~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 417 AGGGPLHKFLVGK---------REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp CTTCBHHHHHTTC---------TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred CCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 9999999998643 24588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCc-ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCcchh
Q 037916 564 LLPPAHL-QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPDHVM 641 (741)
Q Consensus 564 ~~~~~~~-~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (741)
....... ........+++.|+||| +..+..++.++|||||||++|||++ |+.||..... ......+..
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~y~APE-~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~------- 554 (613)
T 2ozo_A 485 ALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ------- 554 (613)
T ss_dssp TCC--------------CCTTSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHHHT-------
T ss_pred cccCCCceeeeccCCCCccceeCHh-hhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHc-------
Confidence 7654322 11122233568899995 4556789999999999999999998 9999863211 111111110
Q ss_pred HhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhcCCc
Q 037916 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILLGPK 714 (741)
Q Consensus 642 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 714 (741)
.... ..+..+++.+.+++.+||+.||++|||+.||++.|+.+........
T Consensus 555 -----~~~~------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~ 604 (613)
T 2ozo_A 555 -----GKRM------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 604 (613)
T ss_dssp -----TCCC------------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSC
T ss_pred -----CCCC------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcccc
Confidence 0000 0012345778899999999999999999999999999987765443
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.2e-39 Score=345.45 Aligned_cols=274 Identities=19% Similarity=0.220 Sum_probs=201.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++....+......+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 468889999999999999999999999999999964322 2245667899999999999999999997655455567899
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+. ++|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 91 lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST-----------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCD 155 (353)
T ss_dssp EEECCCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred EEEeccC-ccHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEe
Confidence 9999995 699998852 3578999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCccc--------ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 559 FGLAKLLPPAHLQT--------SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 559 Fg~a~~~~~~~~~~--------~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
||.+.......... ......||+.|+|||.+..+..++.++||||+||++|+|++|+.||....... .+..
T Consensus 156 fg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 234 (353)
T 2b9h_A 156 FGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLL 234 (353)
T ss_dssp CTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred cccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHH
Confidence 99998765432111 11234689999999766666789999999999999999999999986332110 0000
Q ss_pred hhhhcC------------CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH
Q 037916 631 FARTVL------------PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI 698 (741)
Q Consensus 631 ~~~~~~------------~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 698 (741)
...... .....+........... .........+..+.+++.+||+.||++|||+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 302 (353)
T 2b9h_A 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAA------------PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302 (353)
T ss_dssp HHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCC------------CHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHhCCCchhccccccccchhhHHhhcccCCCCc------------chhhhcccCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 000000 00001111100000000 000011234567889999999999999999999
Q ss_pred HHH
Q 037916 699 VVH 701 (741)
Q Consensus 699 vl~ 701 (741)
+++
T Consensus 303 ll~ 305 (353)
T 2b9h_A 303 ALE 305 (353)
T ss_dssp HHT
T ss_pred Hhc
Confidence 987
No 228
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-39 Score=338.79 Aligned_cols=253 Identities=22% Similarity=0.258 Sum_probs=194.1
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++||||+++++++ ......++
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 93 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY-----YHDGKLWI 93 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECC-CEEE
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee-----eeCCeEEE
Confidence 4588899999999999999999989999999999765555667889999999999999999999995 34558899
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 161 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLEL---------DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADF 161 (302)
T ss_dssp EEECCTTEEHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCC
T ss_pred EEEeCCCCcHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEEC
Confidence 99999999999987532 24588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCccccc----CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG----LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~----~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
|.+....... .......||+.|+|||.+. .+..++.++||||+||++|+|++|..||....... .........
T Consensus 162 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~ 238 (302)
T 2j7t_A 162 GVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSD 238 (302)
T ss_dssp HHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC
T ss_pred CCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccC
Confidence 9875432111 1112245899999996543 46678999999999999999999999986321110 000000000
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+. . .....++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~---------~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 PPT---------L--------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCC---------C--------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred Ccc---------c--------------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000 0 001123456889999999999999999999875
No 229
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-37 Score=336.07 Aligned_cols=330 Identities=22% Similarity=0.205 Sum_probs=287.9
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|+++|.+. .+|..++..+++|++|+|++|+|+++.+..|.++++|++|+|++|++++..|..|.++++ |
T Consensus 51 ~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~----------L 119 (390)
T 3o6n_A 51 TFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL----------L 119 (390)
T ss_dssp EEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT----------C
T ss_pred EecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCC----------C
Confidence 45677776 789888779999999999999999999999999999999999999999888888999986 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+++++.+..|..++ +|++|++++|++.+..+..|..+++|++|+|++|+++++. +..+++|+.|++++
T Consensus 120 ~~L~L~~n~l~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 120 TVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSY 195 (390)
T ss_dssp CEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCS
T ss_pred CEEECCCCccCcCCHHHhcCCC-CCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccc
Confidence 9999999999977777778888 9999999999999999999999999999999999999763 66788999999999
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|.+++ +...++|++|++++|.+..... .+ .++|+.|++++|++++. ..+..+++|+. |+|++|.+.+..
T Consensus 196 n~l~~-----~~~~~~L~~L~l~~n~l~~~~~-~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~-L~Ls~n~l~~~~ 264 (390)
T 3o6n_A 196 NLLST-----LAIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTDT--AWLLNYPGLVE-VDLSYNELEKIM 264 (390)
T ss_dssp SCCSE-----EECCSSCSEEECCSSCCCEEEC-CC--CSSCCEEECCSSCCCCC--GGGGGCTTCSE-EECCSSCCCEEE
T ss_pred ccccc-----cCCCCcceEEECCCCeeeeccc-cc--cccccEEECCCCCCccc--HHHcCCCCccE-EECCCCcCCCcC
Confidence 99984 3455789999999999986533 32 47999999999999853 67899999998 999999999888
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ 321 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 321 (741)
|..|..+++|++|+|++|+++++ +..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|+|++.. +..++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~ 339 (390)
T 3o6n_A 265 YHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHH 339 (390)
T ss_dssp SGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTC
T ss_pred hhHccccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC---chhhc
Confidence 99999999999999999999975 5566789999999999999994 6677889999999999999999653 67788
Q ss_pred cCCcccccCcccccccCCccccCCcccccccCCCCccccCCC
Q 037916 322 LVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 322 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 363 (741)
+|+.|++++|++++.... ..+..+....+.+++..|..+..
T Consensus 340 ~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 340 TLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp CCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTCE
T ss_pred cCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccccc
Confidence 999999999999986432 34566667777888888875533
No 230
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-38 Score=341.43 Aligned_cols=289 Identities=17% Similarity=0.156 Sum_probs=191.1
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc--cCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY--KGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~~ 474 (741)
....+|++.+.||+|+||.||+|++..+++.||+|++... ........+|+..++.++||||+++++++..... ...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 4567899999999999999999999989999999998643 3344567788888899999999999999754321 223
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHH--hcCCCCceecCCCCCCeEeCC-C
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH--HDCQPTTAHCDLKPSNVLLDH-E 551 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~~~~ivHrDlkp~NIll~~-~ 551 (741)
.+.++||||+++ ++.+.+... ......+++..+..++.|++.||.||| +. +|+||||||+||+++. +
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNY------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred eeEEEEeecccc-cHHHHHHHH------hhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 347899999976 554443211 011245788899999999999999999 88 9999999999999997 8
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+.+||+|||++......... ....||+.|+|||.+.....++.++||||+||++|+|++|+.||...... ..+...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~ 244 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEI 244 (360)
T ss_dssp TEEEECCCTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH
T ss_pred CcEEEeeCCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHH
Confidence 99999999999876544322 23458999999966655666899999999999999999999998642111 111222
Q ss_pred hhhcCCcc--hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 632 ARTVLPDH--VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 632 ~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
........ .....++....... ....................+.+.+++.+||+.||++|||+.|+++-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDL--YNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGG--GCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHcCCCCHHHHHhcccchhhccc--cccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 21111110 11111100000000 00000000000001111245678999999999999999999999864
No 231
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=332.44 Aligned_cols=250 Identities=22% Similarity=0.271 Sum_probs=191.4
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEEEecc
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFM 484 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv~e~~ 484 (741)
...||+|+||.||+|.+..+++.||+|+++.......+.+.+|+.+++.++||||+++++++ ......++||||+
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 101 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKIFMEQV 101 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEEEEECC
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEEEEEeC
Confidence 34799999999999999989999999999865555567889999999999999999999995 4456889999999
Q ss_pred cCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC-CCceEEeeccccc
Q 037916 485 HNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH-EMTAHVADFGLAK 563 (741)
Q Consensus 485 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kL~DFg~a~ 563 (741)
++++|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||.+.
T Consensus 102 ~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 102 PGGSLSALLRSKW-------GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp SEEEHHHHHHHTT-------CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred CCCCHHHHHHhhc-------cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999986431 123467888899999999999999999 9999999999999987 8899999999998
Q ss_pred ccCCCCcccccccccccccccCcccccCC-CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhH
Q 037916 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLG-SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMD 642 (741)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPEe~~~~-~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (741)
........ .....||+.|+|||.+..+ ..++.++||||||+++|+|++|+.||................
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-------- 241 (295)
T 2clq_A 172 RLAGINPC--TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF-------- 241 (295)
T ss_dssp ESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH--------
T ss_pred ccCCCCCc--ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc--------
Confidence 76543211 1234689999999655433 247899999999999999999999986321111000000000
Q ss_pred hhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 643 IVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 643 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
..... .+..++..+.+++.+||+.||++|||+.|+++
T Consensus 242 ----~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 242 ----KVHPE------------------IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CCCCC------------------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----ccccc------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 00123456789999999999999999999975
No 232
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.4e-38 Score=331.90 Aligned_cols=254 Identities=21% Similarity=0.285 Sum_probs=199.5
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---------CcchhHHHHHHHHHhcC-CCceeeEeeeec
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---------GASKSSIAECSALRNIR-HKNLVKILTVCS 467 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~ 467 (741)
+...|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.+++++. ||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~- 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY- 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE-
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee-
Confidence 45678999999999999999999999999999999974331 11345678999999995 99999999994
Q ss_pred CccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeE
Q 037916 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVL 547 (741)
Q Consensus 468 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIl 547 (741)
......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. ||+||||||+||+
T Consensus 94 ----~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil 156 (298)
T 1phk_A 94 ----ETNTFFFLVFDLMKKGELFDYLTEK----------VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL 156 (298)
T ss_dssp ----ECSSEEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred ----ccCCeEEEEEeccCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence 4566899999999999999998632 4588999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccccccCCCCcccccccccccccccCccccc-----CCCCCCCccCchhHHHHHHHHHcCCCCCCccc
Q 037916 548 LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG-----LGSEVSINGDVYSYGILLLELMTRKRPSDIMF 622 (741)
Q Consensus 548 l~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~-----~~~~~~~~~DIwSlG~il~elltg~~p~~~~~ 622 (741)
++.++.+||+|||.+......... ....|++.|+|||.+. ....++.++||||+|+++|+|++|..||....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EcCCCcEEEecccchhhcCCCccc---ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 999999999999999876543322 2345899999996543 35568899999999999999999999986321
Q ss_pred cCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 623 EGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. ...... +......... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~--~~~~~~-----------~~~~~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 Q--MLMLRM-----------IMSGNYQFGS----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp H--HHHHHH-----------HHHTCCCCCT----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred H--HHHHHH-----------HhcCCcccCc----------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1 000000 0000000000 000133456889999999999999999999975
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.1e-39 Score=345.92 Aligned_cols=268 Identities=18% Similarity=0.174 Sum_probs=194.0
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccc-cCCceE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDY-KGDDFK 477 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~ 477 (741)
.|.+.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++..... ......
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 57788999999999999999999999999999974322 224567899999999999999999999753321 111234
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 123 ~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~ 186 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKIL 186 (371)
T ss_dssp EEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred EEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEE
Confidence 99999996 68888874 3388999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCC
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 637 (741)
|||.+...... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||...... ..+.........
T Consensus 187 Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~ 260 (371)
T 4exu_A 187 DFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGV 260 (371)
T ss_dssp STTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCC
T ss_pred ecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 99999865432 123458999999966655578999999999999999999999999632111 111111111000
Q ss_pred c-----------chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 638 D-----------HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 638 ~-----------~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
. ............... ........+.+.+.+++.+||+.||++|||+.|+++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 261 PGTEFVQKLNDKAAKSYIQSLPQTPRK------------DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCHHHHTTCSCHHHHHHHHHSCCCCCC------------CHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CcHHHHHHhhhhhhhhhhhccCCCcch------------hHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 000111000000000 0001112345678899999999999999999999864
No 234
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.4e-39 Score=334.42 Aligned_cols=257 Identities=21% Similarity=0.240 Sum_probs=197.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++.. ......
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~~ 82 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTTL 82 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCceE
Confidence 468889999999999999999999999999999974332 234567899999999999999999998642 345678
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----ceecCCCCCCeEeCCCC
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT-----TAHCDLKPSNVLLDHEM 552 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-----ivHrDlkp~NIll~~~~ 552 (741)
++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~ 153 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTK------ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQ 153 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHH------TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSS
T ss_pred EEEEeCCCCCCHHHHHHhhcc------cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCC
Confidence 999999999999999864311 123488999999999999999999999 8 99999999999999999
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||.+......... .....||+.|+||| ...+..++.++||||+|+++|+|++|..||..... .......
T Consensus 154 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i 228 (279)
T 2w5a_A 154 NVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI 228 (279)
T ss_dssp CEEECCCCHHHHC---CHH--HHHHHSCCTTCCHH-HHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred CEEEecCchheeecccccc--ccccCCCccccChH-HhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH
Confidence 9999999999876543211 12245899999995 44566789999999999999999999999863211 0110000
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 703 (741)
........ +..++..+.+++.+||+.||++|||+.|+++.+
T Consensus 229 -----------~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 229 -----------REGKFRRI-------------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp -----------HHTCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred -----------hhcccccC-------------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 00000000 012345688999999999999999999999854
No 235
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.3e-39 Score=336.70 Aligned_cols=269 Identities=21% Similarity=0.256 Sum_probs=180.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ......+
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 89 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF-----VVKDELW 89 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEE-----ESSSCEE
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE-----eecCCcE
Confidence 46888999999999999999998889999999986432 23356678899999999999999999995 4455789
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+++++|.+++....... ......+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKG--EHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTT--TTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred EEehhccCCchHHHHHHHhhcc--ccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEe
Confidence 9999999999999986311000 01124588999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCc---ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 559 FGLAKLLPPAHL---QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 559 Fg~a~~~~~~~~---~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
||.+........ ........||+.|+|||.+.....++.++||||+||++|+|++|+.||......... .......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~ 243 (303)
T 2vwi_A 165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQND 243 (303)
T ss_dssp CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-HHHHTSS
T ss_pred ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-HHHhccC
Confidence 999976654321 111223458999999965544356889999999999999999999998643211110 0000000
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+.......+.... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKEML----------------------KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----CCC----------------------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccccccccchhh----------------------hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000000000010 122356789999999999999999999986
No 236
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=331.89 Aligned_cols=253 Identities=25% Similarity=0.260 Sum_probs=194.7
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.....|++.+.||+|+||.||+|.+..+++.||+|+++.. ...+.+.+|+.++++++||||+++++++ .....
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 98 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSY-----FKNTD 98 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCE
Confidence 3456788999999999999999999989999999999743 3457788999999999999999999995 34568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~~~~~L~~~~~~~---------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 166 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRLR---------NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKL 166 (314)
T ss_dssp EEEEEECCTTEEHHHHHHHH---------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEE
T ss_pred EEEEeecCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEE
Confidence 89999999999999998522 24588999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||.+......... .....||+.|+|| |+..+..++.++||||+||++|+|++|..||....... .........
T Consensus 167 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 241 (314)
T 3com_A 167 ADFGVAGQLTDTMAK--RNTVIGTPFWMAP-EVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNP 241 (314)
T ss_dssp CCCTTCEECBTTBSC--BCCCCSCGGGCCH-HHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC
T ss_pred eecccchhhhhhccc--cCccCCCCCccCh-hhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCC
Confidence 999999776543221 2234689999999 45566678999999999999999999999986321100 000000000
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. .. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~------------~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 PP------------TF----------------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CC------------CC----------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred Cc------------cc----------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 00 001122456889999999999999999999986
No 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.3e-39 Score=345.38 Aligned_cols=199 Identities=24% Similarity=0.322 Sum_probs=169.8
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
...|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE-----EETTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE-----EECCEE
Confidence 456888899999999999999999999999999997532 22345678999999999999999999995 445689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCeEeCCCCceEE
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH-DCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+ . ||+||||||+||+++.++.+||
T Consensus 107 ~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA----------GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEE
Confidence 9999999999999998643 457889999999999999999998 5 8999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCc
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~ 620 (741)
+|||.+....... .....||+.|+|| |+..+..++.++||||+||++|+|++|+.||..
T Consensus 174 ~Dfg~~~~~~~~~----~~~~~gt~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 174 CDFGVSGQLIDSM----ANSFVGTRSYMSP-ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCCCHHHHHHC--------CCCCTTCCH-HHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred EECCCCccccccc----ccCCCCCCCeECH-HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999987543221 1224689999999 555677899999999999999999999999974
No 238
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.7e-39 Score=344.76 Aligned_cols=278 Identities=18% Similarity=0.159 Sum_probs=197.0
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCc-----------chhHHHHHHHHHhcCCCceeeEee
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA-----------SKSSIAECSALRNIRHKNLVKILT 464 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpnIv~~~~ 464 (741)
..+...|++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|+.++++++||||+++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence 345578999999999999999999987 48999999986422211 267889999999999999999999
Q ss_pred eecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 465 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
++...........|+||||+. |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 163 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---------RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPG 163 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred eEEeccCCCcceEEEEEccCC-CCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChH
Confidence 975443345567899999996 6888887632 24588999999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccC
Q 037916 545 NVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEG 624 (741)
Q Consensus 545 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~ 624 (741)
||+++.++.+||+|||.+........ .....||+.|+|||.+.....++.++||||+||++|+|++|+.||......
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 240 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240 (362)
T ss_dssp GEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred HEEEcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999975543322 223458999999966655578999999999999999999999998632111
Q ss_pred CcchhhhhhhcCCcc-----------hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCC
Q 037916 625 NMNLHNFARTVLPDH-----------VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693 (741)
Q Consensus 625 ~~~~~~~~~~~~~~~-----------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 693 (741)
.............. ..+.+......... ...........+.+.+++.+||+.||++|
T Consensus 241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~li~~~L~~dP~~R 308 (362)
T 3pg1_A 241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA-----------RAWTAVVPTADPVALDLIAKMLEFNPQRR 308 (362)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC-----------CCHHHHSTTSCHHHHHHHHHHTCSSGGGS
T ss_pred -HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh-----------hhHHhhCCCCCHHHHHHHHHHhcCChhhC
Confidence 11111111111111 11111111110000 00011112335668899999999999999
Q ss_pred CCHHHHHHH
Q 037916 694 MNMTIVVHE 702 (741)
Q Consensus 694 Ps~~evl~~ 702 (741)
||+.|+++.
T Consensus 309 pt~~ell~h 317 (362)
T 3pg1_A 309 ISTEQALRH 317 (362)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHHcC
Confidence 999999863
No 239
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.7e-39 Score=334.15 Aligned_cols=275 Identities=24% Similarity=0.281 Sum_probs=196.8
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEE-----ecCCce
Confidence 35788899999999999999999899999999986432 23346788999999999999999999995 445689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+. ++|.+++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASA--------LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTT--------TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHhhh--------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEEC
Confidence 99999996 69999886431 13478889999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC-
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL- 636 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~- 636 (741)
|||.+......... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||......+ ..........
T Consensus 146 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 222 (299)
T 2r3i_A 146 DFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGT 222 (299)
T ss_dssp STTHHHHHCCCSBC--TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred cchhhhhccCCccc--cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCC
Confidence 99999876543221 1224589999999665554558999999999999999999999986432111 1111111100
Q ss_pred Ccc-hh-Hhhh-hcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 637 PDH-VM-DIVD-STLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 637 ~~~-~~-~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
+.. .. .... +........ ..............+.+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 223 PDEVVWPGVTSMPDYKPSFPK-------WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTTSTTGGGSTTCCTTSCC-------CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhhhhHhhcCcccchhhhc-------ccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00 0000 000000000 0000000001123466889999999999999999999986
No 240
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.8e-39 Score=334.84 Aligned_cols=255 Identities=20% Similarity=0.213 Sum_probs=182.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC-c-chhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG-A-SKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|++..+++.||+|+++..... . .+.+.++...++.++||||+++++++ ..+...
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~-----~~~~~~ 81 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGDV 81 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSSE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee-----eccCCE
Confidence 4688899999999999999999989999999999743221 1 22233444557788999999999995 445689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||++ |+|.+++.... .....+++..++.++.|++.||+|||++. ||+||||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~ 152 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVI------DKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMC 152 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBC
T ss_pred EEEEehhc-cchHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEe
Confidence 99999996 58877765310 11246899999999999999999999843 89999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccc---cCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY---GLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~---~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|||.+......... ....||+.|+|||.+ ..+..++.++||||+||++|+|++|+.||................
T Consensus 153 Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 229 (290)
T 3fme_A 153 DFGISGYLVDDVAK---DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229 (290)
T ss_dssp CC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS
T ss_pred ecCCcccccccccc---cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhcc
Confidence 99999876543222 223589999999654 356678999999999999999999999986321111111111111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
..+.. . ....+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~------------~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 230 PSPQL------------P------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCCC------------C------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCc------------c------------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 10000 0 0123456889999999999999999999987
No 241
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.6e-38 Score=364.40 Aligned_cols=249 Identities=23% Similarity=0.275 Sum_probs=199.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCC
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 474 (741)
...|++++.||+|+||.||+|++..+++.||||+++.. .....+....|..++..+ +||+|++++++ +++.
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~~ 414 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQTM 414 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBCS
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEeC
Confidence 45688999999999999999999999999999999742 234456778899999887 79999999998 5667
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
...|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++++
T Consensus 415 ~~~~lV~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~i 481 (674)
T 3pfq_A 415 DRLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHI 481 (674)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCE
T ss_pred CEEEEEEeCcCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcE
Confidence 7899999999999999998643 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||+|+........ .....||+.|+|| |+..+..++.++|||||||++|||++|+.||..... ......
T Consensus 482 kL~DFGla~~~~~~~~~--~~~~~GT~~Y~AP-E~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~~ 553 (674)
T 3pfq_A 482 KIADFGMCKENIWDGVT--TKTFCGTPDYIAP-EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQS 553 (674)
T ss_dssp EECCCTTCEECCCTTCC--BCCCCSCSSSCCH-HHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred EEeecceeeccccCCcc--cccccCCCcccCH-hhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHHH
Confidence 99999999864433222 2335799999999 555677899999999999999999999999863211 111111
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCH-----HHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNM-----TIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 701 (741)
+...... . +......+.+|+.+||+.||++||++ +||++
T Consensus 554 --------i~~~~~~--~------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 554 --------IMEHNVA--Y------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------HHSSCCC--C------------------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------HHhCCCC--C------------------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1110000 0 01234567899999999999999998 55553
No 242
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.7e-38 Score=363.53 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=195.4
Q ss_pred hhcccCceeeEEEEEE--cCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEEEE
Q 037916 406 CWIDMGSFGSVYKGIL--DEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVY 481 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~lv~ 481 (741)
++||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|+.++++++|||||+++++|. ....++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 4699999999999965 45678999999974322 23467899999999999999999999962 23478999
Q ss_pred ecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeeccc
Q 037916 482 EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL 561 (741)
Q Consensus 482 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~ 561 (741)
||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN----------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhhC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 999999999999643 4588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCc-ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCcc
Q 037916 562 AKLLPPAHL-QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPDH 639 (741)
Q Consensus 562 a~~~~~~~~-~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (741)
++....... ........+|+.|+||| +..+..++.++|||||||++|||++ |+.||...... .....+..
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE-~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~----- 587 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEK----- 587 (635)
T ss_dssp HHHTTC-------------CGGGSCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT-----
T ss_pred ccccccCccccccccCCCCceeeeChh-hhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc-----
Confidence 987654432 12222344678999995 5566789999999999999999998 99998632111 11111111
Q ss_pred hhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhh
Q 037916 640 VMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSIL 710 (741)
Q Consensus 640 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 710 (741)
...... +..+++.+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 588 -------~~~~~~------------------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 588 -------GERMGC------------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp -------TCCCCC------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCCCC------------------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 000000 1134567889999999999999999999999999887543
No 243
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-39 Score=351.38 Aligned_cols=257 Identities=14% Similarity=0.110 Sum_probs=186.9
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc---CcCcchhHHHHHH---HHHhcCCCceeeEeeeecCcc--cc
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL---HHGASKSSIAECS---ALRNIRHKNLVKILTVCSGVD--YK 472 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~hpnIv~~~~~~~~~~--~~ 472 (741)
.|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|+. .+++++|||||++++.+.... +.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 367788999999999999999888999999999742 2334467789995 455568999999984332100 11
Q ss_pred CC------------c-----eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037916 473 GD------------D-----FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPT 535 (741)
Q Consensus 473 ~~------------~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ 535 (741)
.. . ..|+||||+ +|+|.+++...... ......+++..++.++.||+.||+|||+. +
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHT---TTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccc---ccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11 1 378999999 68999998743110 01123455688889999999999999999 9
Q ss_pred ceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCC-----------CCCCccCchhH
Q 037916 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGS-----------EVSINGDVYSY 604 (741)
Q Consensus 536 ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~-----------~~~~~~DIwSl 604 (741)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||.+ .+. .++.++|||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~-~~~~~~~~~~~~~~~~~~~~DvwSl 299 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELE-ARRATISYHRDRRTLMTFSFDAWAL 299 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHH-HHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhh-cccccccccccccccCChhhhHHHH
Confidence 999999999999999999999999999864331 223457 999999554 444 78999999999
Q ss_pred HHHHHHHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhc
Q 037916 605 GILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVA 684 (741)
Q Consensus 605 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 684 (741)
||++|||++|+.||........ . ... .. . . ..+++.+.+++.+
T Consensus 300 G~il~elltg~~Pf~~~~~~~~-~-~~~-----------~~-~----~-------------------~~~~~~~~~li~~ 342 (377)
T 3byv_A 300 GLVIYWIWCADLPITKDAALGG-S-EWI-----------FR-S----C-------------------KNIPQPVRALLEG 342 (377)
T ss_dssp HHHHHHHHHSSCCC------CC-S-GGG-----------GS-S----C-------------------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCcccccccc-h-hhh-----------hh-h----c-------------------cCCCHHHHHHHHH
Confidence 9999999999999863221110 0 000 00 0 0 0223567899999
Q ss_pred ccccCCCCCCCHHHHHH--HHHHHHH
Q 037916 685 CSMESPQDRMNMTIVVH--ELQSIKS 708 (741)
Q Consensus 685 cl~~dP~~RPs~~evl~--~L~~i~~ 708 (741)
||+.||++|||+.|+++ -++++.+
T Consensus 343 ~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 343 FLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp HTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred HcCCCchhCCCHHHHhhChHHHHHHH
Confidence 99999999999999986 4555544
No 244
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=331.64 Aligned_cols=285 Identities=18% Similarity=0.194 Sum_probs=196.2
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCcc--------
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD-------- 470 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------- 470 (741)
..+|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357889999999999999999999899999999997655555677889999999999999999999864321
Q ss_pred -ccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC
Q 037916 471 -YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD 549 (741)
Q Consensus 471 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~ 549 (741)
.......++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+. ||+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc
Confidence 134567899999996 699999853 3478889999999999999999999 999999999999997
Q ss_pred -CCCceEEeecccccccCCCCc-ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc
Q 037916 550 -HEMTAHVADFGLAKLLPPAHL-QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 550 -~~~~~kL~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~ 627 (741)
+++.+||+|||.+........ ........+|..|+|||.+.....++.++|||||||++|||++|+.||...... ..
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQ 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 567999999999987643211 111223457899999976666678999999999999999999999998633211 01
Q ss_pred hhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 628 LHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 628 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....... .+....+.................. ............++..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 234 MQLILES-IPVVHEEDRQELLSVIPVYIRNDMT-EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHH-SCCCCHHHHHHHHTTSCHHHHHHTT-SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHh-cCCCchhhhhhhhhcCccccccccc-CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111 1100000000000000000000000 0000000111234567899999999999999999999986
No 245
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.8e-38 Score=345.35 Aligned_cols=280 Identities=19% Similarity=0.176 Sum_probs=194.3
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc-cCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY-KGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~l 479 (741)
.|++.+.||+|+||.||+|++..+++.||||++.... ....+|+.++++++|||||++++++..... .+..+.++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 3778899999999999999999899999999986422 233479999999999999999998754221 23345779
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC-CceEEee
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE-MTAHVAD 558 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kL~D 558 (741)
||||+++ ++.+.+.... .....+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 131 v~e~~~~-~l~~~~~~~~------~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~D 200 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYS------RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCD 200 (420)
T ss_dssp EEECCCE-EHHHHHHHHH------HTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred ehhcccc-cHHHHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEecc
Confidence 9999965 6666553210 1125688999999999999999999999 99999999999999965 5789999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||+++........ ....||+.|+|||.+.....++.++||||+||++|||++|+.||..... ...+...+...-..
T Consensus 201 FG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p 276 (420)
T 1j1b_A 201 FGSAKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTP 276 (420)
T ss_dssp CTTCEECCTTCCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSC
T ss_pred chhhhhcccCCCc---eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCC
Confidence 9999876543322 2246899999996665556899999999999999999999999863211 11122222211111
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
....+.. . ........... ..............+..+.+|+.+||+.||++|||+.|+++
T Consensus 277 ~~~~~~~-~-~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 277 TREQIRE-M-NPNYTEFKFPQ-IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CHHHHHH-H-CSCCCCCCCCC-CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHh-h-ChhhhhhccCc-cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1111100 0 00000000000 00000000001123467889999999999999999999985
No 246
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.8e-39 Score=361.33 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=202.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceEEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
..|++.++||+|+||.||+|.+. .+..||||+++... ...+.+.+|+.+|++++||||+++++++. + ...|+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~-~~~~l 338 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPIYI 338 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSCEE
T ss_pred hhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe-----e-ccceE
Confidence 34677889999999999999997 45779999997533 34567899999999999999999999863 2 46799
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeec
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADF 559 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 559 (741)
||||+++|+|.+++... ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 339 v~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 407 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 407 (535)
T ss_dssp EECCCTTEEHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCT
T ss_pred eeehhcCCcHHHHHhhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccc
Confidence 99999999999999632 123478899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhhcCCc
Q 037916 560 GLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 560 g~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
|+++....... .......++..|+|||. ..+..++.++|||||||++|||++ |+.||...... +...
T Consensus 408 G~a~~~~~~~~-~~~~~~~~~~~y~aPE~-~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~----- 475 (535)
T 2h8h_A 408 GLARLIEDNEY-TARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD----- 475 (535)
T ss_dssp TSTTTCCCHHH-HTTCSTTSCGGGSCHHH-HHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH-----
T ss_pred ccceecCCCce-ecccCCcCcccccCHHH-hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH-----
Confidence 99987654321 11223447789999954 455678999999999999999999 99998632111 1110
Q ss_pred chhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 639 HVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 639 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
.+...... .....+++.+.+++.+||+.||++|||+.||++.|+++.....
T Consensus 476 ----~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 476 ----QVERGYRM------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp ----HHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred ----HHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 00000000 0011345678899999999999999999999999998765433
No 247
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-39 Score=342.11 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=195.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEc---CCCeEEEEEEeeccC----cCcchhHHHHHHHHHhc-CCCceeeEeeeecCccc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD---EGKTIIAVKVLNLLH----HGASKSSIAECSALRNI-RHKNLVKILTVCSGVDY 471 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~ 471 (741)
..|++.+.||+|+||.||+|++. .+++.||+|+++... ....+.+.+|+.+++++ +||||+++++++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----- 128 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF----- 128 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE-----
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE-----
Confidence 46889999999999999999984 478999999986422 23345667899999999 699999999984
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE 551 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~ 551 (741)
......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+
T Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 129 QTETKLHLILDYINGGELFTHLSQR----------ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSN 195 (355)
T ss_dssp EETTEEEEEECCCCSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred eeCceEEEEeecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 4556899999999999999998633 4588999999999999999999999 99999999999999999
Q ss_pred CceEEeecccccccCCCCcccccccccccccccCcccccCC-CCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhh
Q 037916 552 MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLG-SEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 552 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~-~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~ 630 (741)
+.+||+|||+++......... .....||+.|+|||.+..+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 196 ~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~ 273 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAE 273 (355)
T ss_dssp SCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHH
T ss_pred CcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHH
Confidence 999999999998664332221 2235699999999655432 457899999999999999999999986322111 1111
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-----CHHHHHHH
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-----NMTIVVHE 702 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 702 (741)
+... +.. .... .+.+....+.+++.+||+.||++|| |+.|+++.
T Consensus 274 ~~~~--------~~~----~~~~----------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 274 ISRR--------ILK----SEPP----------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHH--------HHH----CCCC----------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHH--------Hhc----cCCC----------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1110 000 0000 0012345678999999999999999 88988864
No 248
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.8e-38 Score=345.17 Aligned_cols=197 Identities=23% Similarity=0.282 Sum_probs=165.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc------CCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI------RHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~hpnIv~~~~~~~~~~~~~ 473 (741)
.+|++++.||+|+||.||+|.+..+++.||||+++.. ......+.+|+.+++.+ +|+||+++++++ ..
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~-----~~ 170 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF-----TF 170 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE-----EE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec-----cc
Confidence 4688899999999999999999999999999999642 22345667788888776 578999999995 44
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
....++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~ 238 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNK--------FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGR 238 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTS
T ss_pred CCeEEEEEeccC-CCHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCC
Confidence 568999999995 69999886431 13488999999999999999999999 9999999999999999887
Q ss_pred --eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCc
Q 037916 554 --AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 554 --~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~ 620 (741)
+||+|||++....... ....||+.|+||| +..+..++.++|||||||++|||++|..||..
T Consensus 239 ~~vkL~DFG~a~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 239 SGIKVIDFGSSCYEHQRV-----YTYIQSRFYRAPE-VILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CCEEECCCTTCEETTCCC-----CSSCSCGGGCCHH-HHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cceEEeecccceecCCcc-----cccCCCCCccChH-HHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 9999999997654322 2246899999995 44566789999999999999999999999864
No 249
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=343.93 Aligned_cols=211 Identities=23% Similarity=0.297 Sum_probs=155.6
Q ss_pred HHHHH-hhhcccCceeeEEEEEEc--CCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 400 VSFLF-LCWIDMGSFGSVYKGILD--EGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 400 ~~y~~-~~~ig~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..|.+ .++||+|+||.||+|++. .+++.||+|+++. ......+.+|+.++++++||||+++++++.. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG--TGISMSACREIALLRELKHPNVISLQKVFLS---HADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSS--SSCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECC--CCCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence 45666 457999999999999975 4688999999863 2345678899999999999999999999632 34668
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe----CCCC
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL----DHEM 552 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll----~~~~ 552 (741)
.|+||||+. ++|.+++...+... .......+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred EEEEEeCCC-CCHHHHHHHhcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 999999995 58888775321100 001123488999999999999999999999 99999999999999 6778
Q ss_pred ceEEeecccccccCCCCc-ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCc
Q 037916 553 TAHVADFGLAKLLPPAHL-QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~ 620 (741)
.+||+|||+|+....... ........||+.|+|||.+.....++.++||||+||++|+|++|+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999999987654321 12223356899999996665556799999999999999999999999964
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-38 Score=338.85 Aligned_cols=255 Identities=20% Similarity=0.228 Sum_probs=192.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHHH-HHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSA-LRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++++.||+|+||.||+|++..+++.||||+++.... .....+..|..+ ++.++||||+++++++ ......
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~-----~~~~~~ 125 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGDV 125 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEE-----ECSSCE
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEE-----EeCCcE
Confidence 457788899999999999999988999999999974322 223345556555 6778999999999995 345579
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
|+||||+++ +|.+++.... .....+++..++.++.||+.||+|||+.. ||+||||||+||+++.++.+||+
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~ 196 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVI------DKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMC 196 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHH------HTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEEC
T ss_pred EEEHHHhhC-cHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEe
Confidence 999999965 9988875310 11246889999999999999999999732 89999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccc---cCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY---GLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~---~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
|||++........ .....||+.|+|||.+ .....++.++|||||||++|||++|+.||.........+......
T Consensus 197 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 273 (340)
T 3an0_A 197 DFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273 (340)
T ss_dssp CCSHHHHHSCHHH---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS
T ss_pred eCCCceecccccc---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcC
Confidence 9999987654321 1224589999999654 234578999999999999999999999986321111111111110
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
..+. .. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 274 ~~~~------------~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 274 PSPQ------------LP------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCC------------CC------------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCC------------CC------------------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0000 00 0123456889999999999999999999986
No 251
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.6e-38 Score=329.54 Aligned_cols=260 Identities=21% Similarity=0.234 Sum_probs=192.0
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCcc-------
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD------- 470 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------- 470 (741)
+...|++.+.||+|+||.||+|++..+++.||+|+++.. ....+.+.+|+.++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456899999999999999999999989999999999642 233467789999999999999999999864321
Q ss_pred -ccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC
Q 037916 471 -YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD 549 (741)
Q Consensus 471 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~ 549 (741)
.......|+||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~ 150 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---------NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFID 150 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---------CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---------ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEc
Confidence 12356789999999999999999632 24577888999999999999999999 999999999999999
Q ss_pred CCCceEEeecccccccCCCCc------------ccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCC
Q 037916 550 HEMTAHVADFGLAKLLPPAHL------------QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617 (741)
Q Consensus 550 ~~~~~kL~DFg~a~~~~~~~~------------~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p 617 (741)
.++.+||+|||.+........ ........||+.|+|||.+.....++.++||||+||++|+|++ |
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p 227 (303)
T 1zy4_A 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---P 227 (303)
T ss_dssp TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---C
T ss_pred CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---c
Confidence 999999999999986643210 1112234589999999666555578999999999999999998 5
Q ss_pred CCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHH
Q 037916 618 SDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMT 697 (741)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 697 (741)
|............ ...... ...... ....+..+.+++.+||+.||++|||+.
T Consensus 228 ~~~~~~~~~~~~~-~~~~~~---------~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 279 (303)
T 1zy4_A 228 FSTGMERVNILKK-LRSVSI---------EFPPDF------------------DDNKMKVEKKIIRLLIDHDPNKRPGAR 279 (303)
T ss_dssp CSSHHHHHHHHHH-HHSTTC---------CCCTTC------------------CTTTSHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCchhHHHHHHh-cccccc---------ccCccc------------------cccchHHHHHHHHHHHhcCcccCcCHH
Confidence 4321111000000 000000 000000 012345678999999999999999999
Q ss_pred HHHH
Q 037916 698 IVVH 701 (741)
Q Consensus 698 evl~ 701 (741)
|+++
T Consensus 280 ~ll~ 283 (303)
T 1zy4_A 280 TLLN 283 (303)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9986
No 252
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.5e-38 Score=341.79 Aligned_cols=277 Identities=19% Similarity=0.174 Sum_probs=191.6
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCceeeEeeeecCccc-cCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDY-KGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~l 479 (741)
.|++.+.||+|+||.||+|++..++. ||+|++.... ....+|+.+++.++||||+++++++..... .+..+.++
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 47889999999999999999986665 7888775322 222379999999999999999999754321 33445789
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC-CCCceEEee
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD-HEMTAHVAD 558 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~D 558 (741)
||||++++ +.+.+.... .....+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.+||+|
T Consensus 116 v~e~~~~~-l~~~~~~~~------~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~D 185 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYA------KLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLID 185 (394)
T ss_dssp EEECCSEE-HHHHHHHHH------HTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred EeeccCcc-HHHHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEee
Confidence 99999764 433332110 1124588899999999999999999999 999999999999999 789999999
Q ss_pred cccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcCCc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 638 (741)
||+|+........ ....||+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+..........
T Consensus 186 FG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p 261 (394)
T 4e7w_A 186 FGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTP 261 (394)
T ss_dssp CTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCC
T ss_pred CCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 9999876544322 23468999999976655567999999999999999999999998632111 1122222111111
Q ss_pred chhHh--hhhcc-cCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 639 HVMDI--VDSTL-LADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 639 ~~~~~--~d~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
....+ .++.. ........ ............++.+.+++.+||++||++|||+.|+++-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIR------PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCC------CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CHHHHHhhChhhhhhcccccc------CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 11110 00000 00000000 0000000011244678899999999999999999999864
No 253
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-38 Score=343.01 Aligned_cols=257 Identities=10% Similarity=-0.021 Sum_probs=175.0
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---CcchhHHHHHHHHHhc--CCCceeeEeeeec-------Cc
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---GASKSSIAECSALRNI--RHKNLVKILTVCS-------GV 469 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~hpnIv~~~~~~~-------~~ 469 (741)
|.+.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.+++.+ +||||++++..+. ..
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 6678899999999999999999999999999985432 2234556775544444 6999888653321 10
Q ss_pred cc------------cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHH------HHHHHHHHHHHHHHHhc
Q 037916 470 DY------------KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR------INIAIDVACALKYLHHD 531 (741)
Q Consensus 470 ~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~------~~i~~qi~~aL~~LH~~ 531 (741)
.. ......|+||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---------~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---------DFVYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---------HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---------ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 00 00145899999997 8999999743 122344444 67789999999999999
Q ss_pred CCCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCC--CCCCCccCchhHHHHHH
Q 037916 532 CQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLG--SEVSINGDVYSYGILLL 609 (741)
Q Consensus 532 ~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~--~~~~~~~DIwSlG~il~ 609 (741)
+|+||||||+|||++.++.+||+|||+|+....... ...+|+.|+|||.+ .+ ..++.++||||+||++|
T Consensus 214 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~-~~~~~~~~~~~DiwSlG~il~ 284 (371)
T 3q60_A 214 ---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-----ASSVPVTYAPREFL-NASTATFTHALNAWQLGLSIY 284 (371)
T ss_dssp ---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-----GGGSCGGGCCHHHH-TCSEEECCHHHHHHHHHHHHH
T ss_pred ---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-----CccCCcCCcChhhc-cCCCCCcCccccHHHHHHHHH
Confidence 999999999999999999999999999987643221 23467999999554 44 57899999999999999
Q ss_pred HHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccC
Q 037916 610 ELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMES 689 (741)
Q Consensus 610 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 689 (741)
||++|+.||......... .+........ ....... .....+++.+.+++.+||+.|
T Consensus 285 elltg~~Pf~~~~~~~~~--~~~~~~~~~~----~~~~~~~------------------~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 285 RVWCLFLPFGLVTPGIKG--SWKRPSLRVP----GTDSLAF------------------GSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp HHHHSSCSTTBCCTTCTT--CCCBCCTTSC----CCCSCCC------------------TTSSCCCHHHHHHHHHHTCSS
T ss_pred HHHhCCCCCCCcCccccc--chhhhhhhhc----cccccch------------------hhccCCCHHHHHHHHHHcCCC
Confidence 999999999744222111 0000000000 0000000 000123456889999999999
Q ss_pred CCCCCCHHHHHH
Q 037916 690 PQDRMNMTIVVH 701 (741)
Q Consensus 690 P~~RPs~~evl~ 701 (741)
|++|||+.|+++
T Consensus 341 P~~Rpt~~e~l~ 352 (371)
T 3q60_A 341 RRRRLLPLEAME 352 (371)
T ss_dssp TTTCCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999975
No 254
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.9e-38 Score=335.60 Aligned_cols=271 Identities=16% Similarity=0.189 Sum_probs=197.6
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCc---c--------------hhHHHHHHHHHhcCCCceeeE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA---S--------------KSSIAECSALRNIRHKNLVKI 462 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~hpnIv~~ 462 (741)
.+|++.+.||+|+||.||+|.+ +++.||+|++....... . +.+.+|+.++++++||||+++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred CceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 4688999999999999999999 79999999997432211 1 778999999999999999999
Q ss_pred eeeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCC
Q 037916 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH-DCQPTTAHCDL 541 (741)
Q Consensus 463 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDl 541 (741)
++++ ......++||||+++++|.+++........ .....+++..++.++.|++.||.|||+ . ||+||||
T Consensus 109 ~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl 178 (348)
T 2pml_X 109 EGII-----TNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDV 178 (348)
T ss_dssp SEEE-----ESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCC
T ss_pred EEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCC
Confidence 9995 445689999999999999999431100000 113568999999999999999999999 8 9999999
Q ss_pred CCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCC-ccCchhHHHHHHHHHcCCCCCCc
Q 037916 542 KPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI-NGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 542 kp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~-~~DIwSlG~il~elltg~~p~~~ 620 (741)
||+||+++.++.+||+|||.+...... ......||+.|+|||.+.....++. ++||||+||++|+|++|..||..
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 254 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999876443 1223568999999966554436665 99999999999999999999873
Q ss_pred cccCCcchhhhhhhcC--CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH
Q 037916 621 MFEGNMNLHNFARTVL--PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI 698 (741)
Q Consensus 621 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 698 (741)
................ +.....+..... ...........+..+.+++.+||+.||++|||+.|
T Consensus 255 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e 319 (348)
T 2pml_X 255 KISLVELFNNIRTKNIEYPLDRNHFLYPLT---------------NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED 319 (348)
T ss_dssp SSCSHHHHHHHTSCCCCCCCSSSSSTTTTC---------------C--------CCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCcHHHHHHHHhccCcCCccchhhhhcccc---------------ccccccchhhcCHHHHHHHHHHccCChhhCCCHHH
Confidence 3221111111111100 000000000000 00000111234567889999999999999999999
Q ss_pred HHH
Q 037916 699 VVH 701 (741)
Q Consensus 699 vl~ 701 (741)
+++
T Consensus 320 ~l~ 322 (348)
T 2pml_X 320 ALK 322 (348)
T ss_dssp HHT
T ss_pred Hhc
Confidence 986
No 255
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.3e-37 Score=350.01 Aligned_cols=337 Identities=22% Similarity=0.209 Sum_probs=294.5
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|++.|.+. .+|..++..+++|++|+|++|.|+++.+..|.++++|++|+|++|.|++..|..|+++++ |
T Consensus 57 ~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~----------L 125 (597)
T 3oja_B 57 TFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL----------L 125 (597)
T ss_dssp EESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT----------C
T ss_pred EeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCC----------C
Confidence 46677776 788888779999999999999999999999999999999999999999988888999986 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|.|+++++..|..++ +|++|+|++|.+.+..|..|..+++|++|+|++|.|+++. +..+++|+.|++++
T Consensus 126 ~~L~L~~n~l~~l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 126 TVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSY 201 (597)
T ss_dssp CEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCS
T ss_pred CEEEeeCCCCCCCCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhccc
Confidence 9999999999988777788888 9999999999999999999999999999999999999764 56678999999999
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|.+++ +...++|+.|++++|.+....+.. .++|+.|+|++|++++ +..+..+++|+. |+|++|.|.+..
T Consensus 202 n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~-L~Ls~N~l~~~~ 270 (597)
T 3oja_B 202 NLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVE-VDLSYNELEKIM 270 (597)
T ss_dssp SCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSE-EECCSSCCCEEE
T ss_pred Ccccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCE-EECCCCccCCCC
Confidence 99984 455678999999999998655433 2689999999999985 478999999998 999999999999
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ 321 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 321 (741)
|..|+.+++|+.|+|++|.++++ +..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.|++.. +..++
T Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~ 345 (597)
T 3oja_B 271 YHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHH 345 (597)
T ss_dssp SGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTC
T ss_pred HHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcC
Confidence 99999999999999999999975 566678999999999999999 57778899999999999999999653 66778
Q ss_pred cCCcccccCcccccccCCccccCCcccccccCCCCccccCCCCCCCccC
Q 037916 322 LVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGIPEFQLPICG 370 (741)
Q Consensus 322 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~ 370 (741)
+|+.|+|++|++++.... ..+.......+.++...|+..+......|.
T Consensus 346 ~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~cc 393 (597)
T 3oja_B 346 TLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLEHGLCC 393 (597)
T ss_dssp CCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEETTEEE
T ss_pred CCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhccCCccc
Confidence 999999999999987533 335666667778888899876555444443
No 256
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.6e-38 Score=323.82 Aligned_cols=255 Identities=22% Similarity=0.263 Sum_probs=199.7
Q ss_pred HHHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCcccc
Q 037916 395 GILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472 (741)
Q Consensus 395 ~~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 472 (741)
...+..+|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ .
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~ 91 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----E 91 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----E
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----e
Confidence 3556789999999999999999999999899999999997432 23456788999999999999999999995 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC-
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE- 551 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~- 551 (741)
.....++||||+++++|.+++... ..+++..++.++.|++.||.|||+. ||+||||||+||+++.+
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~ 158 (287)
T 2wei_A 92 DSSSFYIVGELYTGGELFDEIIKR----------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKE 158 (287)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred CCCeEEEEEEccCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCC
Confidence 556899999999999999887532 4578999999999999999999999 99999999999999764
Q ss_pred --CceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchh
Q 037916 552 --MTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629 (741)
Q Consensus 552 --~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~ 629 (741)
+.+||+|||.+......... ....||+.|+|||.+ .+ .++.++||||+|+++|+|++|..||...... ...
T Consensus 159 ~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~-~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~ 231 (287)
T 2wei_A 159 KDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DIL 231 (287)
T ss_dssp TTCCEEECSTTGGGTBCCCSSC---SCHHHHHTTCCHHHH-TT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH
T ss_pred CcccEEEeccCcceeecCCCcc---ccccCcccccChHHh-cC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHH
Confidence 47999999999866543221 224589999999654 33 4889999999999999999999998632111 110
Q ss_pred hhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 630 NFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 630 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.. +......... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~-----------~~~~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 232 KR-----------VETGKYAFDL----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HH-----------HHHCCCCCCS----------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HH-----------HHcCCCCCCc----------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 0000000000 001123456889999999999999999999987
No 257
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=339.04 Aligned_cols=269 Identities=19% Similarity=0.191 Sum_probs=193.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcCCCceeeEeeeecCccc-cCCce
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSGVDY-KGDDF 476 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-~~~~~ 476 (741)
..|.+.+.||+|+||.||+|++..+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..... .....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 357788999999999999999999999999999964322 224567889999999999999999999643221 11124
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+. ++|.+++. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||
T Consensus 104 ~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl 167 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKI 167 (353)
T ss_dssp CEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEE
T ss_pred EEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEE
Confidence 599999996 68888774 2378899999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc-
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV- 635 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~- 635 (741)
+|||.+...... .....||+.|+|||.+.....++.++||||+||++|+|++|+.||...... ..+.......
T Consensus 168 ~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~ 241 (353)
T 3coi_A 168 LDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTG 241 (353)
T ss_dssp CSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHC
T ss_pred eecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 999999765432 122458999999966655578899999999999999999999998632211 0111111100
Q ss_pred CC----------cchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 636 LP----------DHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 636 ~~----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+ ......+......... ............+.+++.+||+.||++|||+.|+++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRK------------DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp BCCHHHHTTCSCHHHHHHHHTSCBCSSC------------CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCHHHHHHHhhHHHHHHHHhCcCCCCc------------cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 0000111000000000 0000111345678899999999999999999999863
No 258
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-37 Score=322.28 Aligned_cols=237 Identities=13% Similarity=0.074 Sum_probs=182.8
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC---cchhHHHHHHHHHhcCCCceeeEeeeecCccccCC
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG---ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGD 474 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 474 (741)
+.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ ...
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~ 103 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTR 103 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EEC
Confidence 446799999999999999999999989999999999753322 236788999999999999999999995 445
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCce
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 554 (741)
+..|+||||++|++|.++++.. ....++..++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~------------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~ 168 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS------------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDV 168 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCE
T ss_pred CcEEEEEEecCCCCHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCE
Confidence 6899999999999999998532 24456788999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+++| |++| ++.++|||||||++|||++|+.||........ +.....
T Consensus 169 kl~~~~----------------------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~- 216 (286)
T 3uqc_A 169 VLAYPA----------------------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LAPAER- 216 (286)
T ss_dssp EECSCC----------------------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SEECCB-
T ss_pred EEEecc----------------------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hHHHHH-
Confidence 998443 3333 57899999999999999999999974322110 000000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHhhc
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSILL 711 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 711 (741)
......... ......+++.+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 217 ~~~~~~~~~------------------------~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 217 DTAGQPIEP------------------------ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CTTSCBCCH------------------------HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HhccCCCCh------------------------hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 000000000 00011334668899999999999999 99999999999886554
No 259
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=331.29 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=190.0
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc------CcchhHHHHHHHHHhc----CCCceeeEeee
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH------GASKSSIAECSALRNI----RHKNLVKILTV 465 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~hpnIv~~~~~ 465 (741)
..+..+|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 4566789999999999999999999998999999999964322 1234456799999888 89999999999
Q ss_pred ecCccccCCceEEEEEec-ccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 037916 466 CSGVDYKGDDFKALVYEF-MHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPS 544 (741)
Q Consensus 466 ~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~ 544 (741)
+ ......++|||| +.+++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 107 ~-----~~~~~~~~v~e~~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 168 (312)
T 2iwi_A 107 F-----ETQEGFMLVLERPLPAQDLFDYITEK----------GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDE 168 (312)
T ss_dssp C----------CEEEEECCSSEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGG
T ss_pred E-----ecCCeEEEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChh
Confidence 4 455678999999 7889999998642 4588999999999999999999999 9999999999
Q ss_pred CeEeC-CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCcccc
Q 037916 545 NVLLD-HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFE 623 (741)
Q Consensus 545 NIll~-~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~ 623 (741)
||+++ .++.+||+|||.+........ ....||+.|+|||.+......+.++||||+||++|+|++|+.||.....
T Consensus 169 Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 244 (312)
T 2iwi_A 169 NILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244 (312)
T ss_dssp GEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred hEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH
Confidence 99999 789999999999987654322 2345899999996655445556789999999999999999999863210
Q ss_pred CCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 624 GNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
..+..... .......+.+++.+||+.||++|||+.|+++.
T Consensus 245 -------------------~~~~~~~~--------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 -------------------ILEAELHF--------------------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------------------HHHTCCCC--------------------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------------------HhhhccCC--------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 01223567899999999999999999999863
No 260
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2e-38 Score=329.64 Aligned_cols=259 Identities=24% Similarity=0.279 Sum_probs=190.4
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC-C--CeEEEEEEeeccC---cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE-G--KTIIAVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~-~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 473 (741)
..|++.+.||+|+||.||+|++.. + +..||+|+++... ....+.+.+|+.++++++||||+++++++. .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 92 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-----T 92 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-----c
Confidence 468889999999999999998642 2 3369999987432 233467789999999999999999999953 2
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
. ..++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 93 ~-~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~ 159 (291)
T 1u46_A 93 P-PMKMVTELAPLGSLLDRLRKH---------QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 159 (291)
T ss_dssp S-SCEEEEECCTTCBHHHHHHHH---------GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTE
T ss_pred C-CceeeEecccCCCHHHHHHhc---------cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCC
Confidence 2 378999999999999998632 24588999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCccc-ccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhh
Q 037916 554 AHVADFGLAKLLPPAHLQT-SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~-~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~ 631 (741)
+||+|||.+.......... ......+|+.|+||| +..+..++.++||||+|+++|+|++ |+.||...... ..
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~ 233 (291)
T 1u46_A 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QI 233 (291)
T ss_dssp EEECCCTTCEECCC-CCEEEC-----CCGGGCCHH-HHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HH
T ss_pred EEEccccccccccccccchhhhccCCCCceeeCch-hhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HH
Confidence 9999999998775443211 122345788999995 4456678899999999999999999 99998632111 11
Q ss_pred hhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHH
Q 037916 632 ARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKS 708 (741)
Q Consensus 632 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 708 (741)
... +........ ....++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 234 ~~~--------~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 234 LHK--------IDKEGERLP------------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHH--------HHTSCCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHH--------HHccCCCCC------------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 110 000000000 001334678899999999999999999999999988764
No 261
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.2e-38 Score=331.05 Aligned_cols=245 Identities=20% Similarity=0.223 Sum_probs=196.3
Q ss_pred HHHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------cchhHHHHHHHHHhcC--CCceeeEeeeec
Q 037916 396 ILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------ASKSSIAECSALRNIR--HKNLVKILTVCS 467 (741)
Q Consensus 396 ~~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpnIv~~~~~~~ 467 (741)
..+...|++.+.||+|+||.||+|++..+++.||+|+++..... ....+.+|+.++++++ ||||+++++++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~- 117 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF- 117 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE-
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE-
Confidence 44556799999999999999999999999999999999754322 2355678999999996 59999999994
Q ss_pred CccccCCceEEEEEecccC-CChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 037916 468 GVDYKGDDFKALVYEFMHN-GSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546 (741)
Q Consensus 468 ~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NI 546 (741)
......++|||++.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 118 ----~~~~~~~lv~e~~~~~~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 180 (320)
T 3a99_A 118 ----ERPDSFVLILERPEPVQDLFDFITER----------GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENI 180 (320)
T ss_dssp ----ECSSEEEEEEECCSSEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred ----ecCCcEEEEEEcCCCCccHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHE
Confidence 456689999999976 8999998632 4578899999999999999999999 999999999999
Q ss_pred EeC-CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCC
Q 037916 547 LLD-HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625 (741)
Q Consensus 547 ll~-~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~ 625 (741)
+++ .++.+||+|||.+........ ....||+.|+|||.+.....++.++|||||||++|||++|+.||.....
T Consensus 181 ll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-- 254 (320)
T 3a99_A 181 LIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-- 254 (320)
T ss_dssp EEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--
T ss_pred EEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--
Confidence 999 778999999999987654322 2245899999996655455557899999999999999999999863210
Q ss_pred cchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 626 MNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
. ........ ...++.+.+++.+||+.||++|||+.|+++
T Consensus 255 -----~------------~~~~~~~~--------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 -----I------------IRGQVFFR--------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----H------------HHCCCCCS--------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----h------------hccccccc--------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000000 012356789999999999999999999986
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=330.03 Aligned_cols=257 Identities=21% Similarity=0.266 Sum_probs=192.2
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccc-cCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDY-KGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~-~~~~~~ 477 (741)
..|++.+.||+|+||.||+|++..+++.||+|++... ....+.+.+|+.+++++ +||||+++++++..... ......
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 102 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 102 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceE
Confidence 4588889999999999999999889999999999753 23456788999999999 89999999999753211 114578
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++++|.+++... ....+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 103 WLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp EEEEECCTTEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 9999999999999998643 124578889999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccC----CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL----GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 558 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~----~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
|||.+......... .....||+.|+|||.+.. +..++.++|||||||++|+|++|..||....... .......
T Consensus 172 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 248 (326)
T 2x7f_A 172 DFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPR 248 (326)
T ss_dssp CCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred eCcCceecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhc
Confidence 99998865433211 122458999999965532 4668899999999999999999999986321110 0000000
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
...+ ... ...++..+.+++.+||..||++|||+.|+++
T Consensus 249 ~~~~---------~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 249 NPAP---------RLK---------------------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCCC---------CCS---------------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccc---------cCC---------------------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 000 0022356789999999999999999999987
No 263
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.7e-37 Score=337.58 Aligned_cols=284 Identities=18% Similarity=0.184 Sum_probs=200.0
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC--------CCceeeEeeeecCc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR--------HKNLVKILTVCSGV 469 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------hpnIv~~~~~~~~~ 469 (741)
+..+|++.++||+|+||.||+|++..+++.||+|+++.. ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 346799999999999999999999999999999999632 223466788999999885 78899999986421
Q ss_pred cccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC
Q 037916 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD 549 (741)
Q Consensus 470 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~ 549 (741)
. ......++||||+ ++++.+++... ....+++..++.++.||+.||+|||+++ ||+||||||+|||++
T Consensus 114 ~-~~~~~~~lv~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~ 181 (397)
T 1wak_A 114 G-VNGTHICMVFEVL-GHHLLKWIIKS--------NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLS 181 (397)
T ss_dssp E-TTEEEEEEEECCC-CCBHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEEC
T ss_pred C-CCCceEEEEEecc-CccHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEe
Confidence 1 2456889999999 56766665432 1245889999999999999999999853 899999999999998
Q ss_pred CCC-------------------------------------------------ceEEeecccccccCCCCccccccccccc
Q 037916 550 HEM-------------------------------------------------TAHVADFGLAKLLPPAHLQTSSIGVKGT 580 (741)
Q Consensus 550 ~~~-------------------------------------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt 580 (741)
.++ .+||+|||.+...... .....||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt 256 (397)
T 1wak_A 182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQT 256 (397)
T ss_dssp CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSC
T ss_pred ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCC
Confidence 775 7999999999876432 1224689
Q ss_pred ccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcc-----hhhhhhhcCCcchhHh----------hh
Q 037916 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN-----LHNFARTVLPDHVMDI----------VD 645 (741)
Q Consensus 581 ~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~----------~d 645 (741)
+.|+||| +..+..++.++|||||||++|||++|+.||......... ...... ......... +.
T Consensus 257 ~~y~aPE-~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~ 334 (397)
T 1wak_A 257 RQYRSLE-VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE-LLGKVPRKLIVAGKYSKEFFT 334 (397)
T ss_dssp GGGCCHH-HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH-HHCSCCHHHHHHCTTGGGTBC
T ss_pred CcccCCh-hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH-hcCCCChHHhhcccccccccC
Confidence 9999995 555667899999999999999999999999743222110 111110 000000000 00
Q ss_pred hccc-CCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 646 STLL-ADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 646 ~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.... .......................+....+.+++.+||+.||++|||+.|+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 335 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000 0000000000000111112233566788999999999999999999999985
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.2e-37 Score=326.13 Aligned_cols=280 Identities=22% Similarity=0.288 Sum_probs=198.0
Q ss_pred HHHHHhhhcccCceeeEEEEEEc-CCCeEEEEEEeeccC--cCcchhHHHHHHHHHhc---CCCceeeEeeeecCccccC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILD-EGKTIIAVKVLNLLH--HGASKSSIAECSALRNI---RHKNLVKILTVCSGVDYKG 473 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~hpnIv~~~~~~~~~~~~~ 473 (741)
..|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+.+++.+ +||||+++++++.......
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 46889999999999999999995 678999999997432 22345677888887776 8999999999975332235
Q ss_pred CceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc
Q 037916 474 DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553 (741)
Q Consensus 474 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 553 (741)
....++||||+. |+|.+++.... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~ 158 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVP--------EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ 158 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSC--------TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcc--------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCC
Confidence 567899999996 69999986431 23478999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhh
Q 037916 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633 (741)
Q Consensus 554 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 633 (741)
+||+|||.+....... ......||+.|+||| +..+..++.++||||+||++|+|++|+.||....... .+.....
T Consensus 159 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~ 233 (326)
T 1blx_A 159 IKLADFGLARIYSFQM---ALTSVVVTLWYRAPE-VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILD 233 (326)
T ss_dssp EEECSCCSCCCCCGGG---GGCCCCCCCTTCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred EEEecCcccccccCCC---CccccccccceeCHH-HHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHH
Confidence 9999999998654322 122356899999995 5556678999999999999999999999986332111 1111111
Q ss_pred hcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 634 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.........+........ ..................+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 234 VIGLPGEEDWPRDVALPR-----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHCCCCGGGSCTTCSSCG-----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcCCCCcccCccccccch-----hhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000000000 000000000000011133466789999999999999999999985
No 265
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.2e-37 Score=329.06 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=197.2
Q ss_pred HHHHHHHhhhcccCceeeEEEEEE-cCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCC------ceeeEeeeecCcc
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGIL-DEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK------NLVKILTVCSGVD 470 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp------nIv~~~~~~~~~~ 470 (741)
+..+|++.+.||+|+||.||+|.+ ..+++.||+|+++.. ....+.+.+|+.+++.++|+ +|+++++++
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~---- 86 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF---- 86 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE----
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc----
Confidence 345789999999999999999998 557899999999642 22345678899999888654 599999984
Q ss_pred ccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC
Q 037916 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH 550 (741)
Q Consensus 471 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~ 550 (741)
......++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 87 -~~~~~~~lv~e~~-~~~l~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 153 (339)
T 1z57_A 87 -EHHGHICIVFELL-GLSTYDFIKENG--------FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQ 153 (339)
T ss_dssp -EETTEEEEEEECC-CCBHHHHHHHTT--------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESC
T ss_pred -ccCCcEEEEEcCC-CCCHHHHHHhcC--------CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEec
Confidence 4556899999999 889999986431 13578899999999999999999999 9999999999999987
Q ss_pred -------------------CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHH
Q 037916 551 -------------------EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611 (741)
Q Consensus 551 -------------------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~el 611 (741)
++.+||+|||.+....... ....||+.|+||| +..+..++.++||||+||++|||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 154 SDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPE-VILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp CCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHH-HHTTSCCCTHHHHHHHHHHHHHH
T ss_pred cccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChH-HhhCCCCCcchhhHHHHHHHHHH
Confidence 6689999999998654322 2246899999995 55567789999999999999999
Q ss_pred HcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccC--------Ccchhhhhhhh-----HHHHHhHhhHHHHHHHH
Q 037916 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA--------DDEDLTITSNQ-----RQRQARINNIMECLISV 678 (741)
Q Consensus 612 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~--------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 678 (741)
++|..||...... .....+..........+....... ........... ............+.+.+
T Consensus 228 ~~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (339)
T 1z57_A 228 YLGFTVFPTHDSK--EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305 (339)
T ss_dssp HHSSCSCCCSCHH--HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH
T ss_pred HhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHH
Confidence 9999998632211 111111111111001110000000 00000000000 00000001122456789
Q ss_pred HHHhhcccccCCCCCCCHHHHHH
Q 037916 679 VRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 679 ~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+++.+||+.||++|||+.|+++
T Consensus 306 ~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 306 FDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHhCcCcccccCHHHHhc
Confidence 99999999999999999999985
No 266
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=330.53 Aligned_cols=260 Identities=21% Similarity=0.251 Sum_probs=191.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|+.++++++||||+++++++ ......
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~ 104 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC-----MSPPHL 104 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE-----ECSSCE
T ss_pred HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCCce
Confidence 357788999999999999999863 38999987432 23345677899999999999999999995 345579
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEe
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 557 (741)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+
T Consensus 105 ~iv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDA---------KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp EEECBCCCSEEHHHHTTSS---------CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEEC
T ss_pred EEEeecccCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEe
Confidence 9999999999999999643 23578899999999999999999999 999999999999998 6799999
Q ss_pred ecccccccCCCC---cccccccccccccccCcccccC--------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCc
Q 037916 558 DFGLAKLLPPAH---LQTSSIGVKGTIGYIAPAEYGL--------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM 626 (741)
Q Consensus 558 DFg~a~~~~~~~---~~~~~~~~~gt~~y~aPEe~~~--------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~ 626 (741)
|||++....... .........||+.|+|||.+.. ...++.++|||||||++|||++|+.||.......
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~- 250 (319)
T 2y4i_B 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA- 250 (319)
T ss_dssp CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-
T ss_pred ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999987653221 1112223458999999965543 3457899999999999999999999986321110
Q ss_pred chhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHH
Q 037916 627 NLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSI 706 (741)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 706 (741)
........... .... ..++..+.+++.+||..||++|||+.|+++.|+.+
T Consensus 251 -~~~~~~~~~~~--------~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l 300 (319)
T 2y4i_B 251 -IIWQMGTGMKP--------NLSQ---------------------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300 (319)
T ss_dssp -HHHHHHTTCCC--------CCCC---------------------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred -HHHHhccCCCC--------CCCc---------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00000000000 0000 01234577999999999999999999999999998
Q ss_pred HHhhc
Q 037916 707 KSILL 711 (741)
Q Consensus 707 ~~~~~ 711 (741)
.+...
T Consensus 301 ~~~~~ 305 (319)
T 2y4i_B 301 PKRNR 305 (319)
T ss_dssp -----
T ss_pred HHhhc
Confidence 86543
No 267
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-37 Score=326.59 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=186.3
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--CcchhHHHHHHHHHhcC--CCceeeEeeeecCccccCCce
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIR--HKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~~~~ 476 (741)
.|++.+.||+|+||.||+|.+. +++.||+|+++.... ...+.+.+|+.++++++ ||||+++++++ .....
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~~~ 102 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQY 102 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE-----ECSSE
T ss_pred eEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe-----ecCCE
Confidence 4788899999999999999986 588999999974322 23466789999999996 59999999995 44568
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.++||| +.+++|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||++++ +.+||
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHC----------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEE
T ss_pred EEEEEe-cCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEE
Confidence 999999 4588999998643 4578889999999999999999999 9999999999999964 89999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccC----------CCCCCCccCchhHHHHHHHHHcCCCCCCccccCCc
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL----------GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM 626 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~----------~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~ 626 (741)
+|||.+................||+.|+|||.+.. ...++.++|||||||++|+|++|+.||........
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (313)
T 3cek_A 168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 247 (313)
T ss_dssp CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH
Confidence 99999987654433222233568999999965532 24688999999999999999999999863221111
Q ss_pred chhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 627 NLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
.+ ....+........ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~------------~~~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 248 KL------------HAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HH------------HHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH------------HHHHhcccccCCc------------------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11 1111111110000 0123467899999999999999999999864
No 268
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.6e-36 Score=331.47 Aligned_cols=319 Identities=26% Similarity=0.312 Sum_probs=224.2
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
++++|.+. .+|. +. .+++|++|+|++|+|+++.+ |.++++|++|+|++|++++..+ |.++++ |
T Consensus 52 ~l~~~~i~-~l~~-~~-~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~----------L 114 (466)
T 1o6v_A 52 QADRLGIK-SIDG-VE-YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTN----------L 114 (466)
T ss_dssp ECCSSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTT----------C
T ss_pred ecCCCCCc-cCcc-hh-hhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCC----------C
Confidence 35566665 4553 43 57777777777777775543 7777777777777777775443 666654 7
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCC-------------------ccccCCCCccEEEcccccccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIP-------------------AGIGKFINLQTLHMWDNQLSG 142 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~-------------------~~~~~l~~L~~L~L~~N~i~~ 142 (741)
++|+|++|++++..+ +..++ +|++|++++|.+..... ..+..+++|++|++++|.+++
T Consensus 115 ~~L~L~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 115 TGLTLFNNQITDIDP--LKNLT-NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CEEECCSSCCCCCGG--GTTCT-TCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred CEEECCCCCCCCChH--HcCCC-CCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCC
Confidence 777777777775533 56665 67777777776654311 125566677777777777765
Q ss_pred cCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccc
Q 037916 143 TISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMD 222 (741)
Q Consensus 143 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 222 (741)
+ ..+..+++|++|++++|++++..+ ++.+++|++|++++|.+++. ..+..+++|++|++++|++++..| +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 4 346777777777777777775544 66677777777777777643 356777788888888887775443 777
Q ss_pred cccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCee
Q 037916 223 LTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVL 302 (741)
Q Consensus 223 l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 302 (741)
+++|+. |++++|.+++..+ +..+++|+.|+|++|+++++.+ +..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 264 l~~L~~-L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 264 LTKLTE-LKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp CTTCSE-EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCCCCE-EECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 777776 8888888775443 7777888888888888876544 6777888888888888886655 6778888888
Q ss_pred eCCCCcCCCccchhhhccccCCcccccCcccccccCCccccCCcccccccCCCCcc
Q 037916 303 DLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLC 358 (741)
Q Consensus 303 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 358 (741)
++++|++++. ..+..+++|+.|++++|++++.+| ...++.+..+++.+|++..
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccC
Confidence 8888888764 357778888888888888887776 5566777888888886654
No 269
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.4e-38 Score=331.63 Aligned_cols=258 Identities=19% Similarity=0.220 Sum_probs=174.0
Q ss_pred HHHHHHHhh-hcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHH-HHHHhcCCCceeeEeeeecCccccCCc
Q 037916 398 LFVSFLFLC-WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAEC-SALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 398 ~~~~y~~~~-~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
+..+|.+.+ .||+|+||.||+|.+..+++.||+|++... ....+|+ ..++.+.||||+++++++.... .+..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCc
Confidence 345677765 599999999999999999999999998632 2233333 3456679999999999964321 2345
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC---CC
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH---EM 552 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~---~~ 552 (741)
..++||||+++|+|.+++.... ...+++.+++.++.|++.||.|||+. +|+||||||+||+++. ++
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~ 168 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERG--------DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDA 168 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC---------CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTC
T ss_pred eEEEEEeccCCCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCc
Confidence 6899999999999999997431 24588999999999999999999999 9999999999999976 45
Q ss_pred ceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 553 TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 553 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
.+||+|||.+........ ....||+.|+|| |+..+..++.++||||+||++|+|++|..||.......... ..
T Consensus 169 ~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aP-E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~- 241 (336)
T 3fhr_A 169 VLKLTDFGFAKETTQNAL----QTPCYTPYYVAP-EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GM- 241 (336)
T ss_dssp CEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred eEEEeccccceecccccc----ccCCCCcCccCh-hhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hH-
Confidence 699999999986654322 224589999999 55567788999999999999999999999986332211100 00
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
............. . ....++..+.+++.+||+.||++|||+.|+++-
T Consensus 242 ~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 242 KRRIRLGQYGFPN----P-------------------EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---------CCCT----T-------------------TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhccccccCc----h-------------------hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000000 0 001234568899999999999999999999973
No 270
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-35 Score=316.54 Aligned_cols=304 Identities=21% Similarity=0.313 Sum_probs=260.1
Q ss_pred CCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCch
Q 037916 19 TLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGC 98 (741)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 98 (741)
.+++|++|++++|.++.+ + .|..+++|++|+|++|++++..+ |..+++ |++|+|++|.+++. ..
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~----------L~~L~L~~n~i~~~--~~ 105 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVK----------LTNLYIGTNKITDI--SA 105 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTT----------CCEEECCSSCCCCC--GG
T ss_pred hcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCc----------CCEEEccCCcccCc--hH
Confidence 569999999999999854 3 48889999999999999995543 777765 99999999999864 35
Q ss_pred hhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCccc
Q 037916 99 ICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKL 178 (741)
Q Consensus 99 ~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 178 (741)
+..++ +|++|++++|++....+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..+++|
T Consensus 106 ~~~l~-~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L 179 (347)
T 4fmz_A 106 LQNLT-NLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDL 179 (347)
T ss_dssp GTTCT-TCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTC
T ss_pred HcCCC-cCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCC
Confidence 78887 99999999999976544 889999999999999665443 448999999999999999986544 8899999
Q ss_pred ceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecc
Q 037916 179 LQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258 (741)
Q Consensus 179 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 258 (741)
++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|+. |++++|.+++..+ +..+++|++|++++
T Consensus 180 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~-L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 252 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNS-LKIGNNKITDLSP--LANLSQLTWLEIGT 252 (347)
T ss_dssp SEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCE-EECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCE-EEccCCccCCCcc--hhcCCCCCEEECCC
Confidence 999999999986544 8889999999999999985444 888999997 9999999985544 88999999999999
Q ss_pred ccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccC
Q 037916 259 NMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 259 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 338 (741)
|.++.+ ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++.+|
T Consensus 253 n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 253 NQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 999875 5688999999999999999975 468899999999999999998889999999999999999999998877
Q ss_pred CccccCCcccccccCCCC
Q 037916 339 TEGVFKNASAISVFGNSK 356 (741)
Q Consensus 339 ~~~~~~~~~~~~~~~n~~ 356 (741)
...++.++.+++.+|+.
T Consensus 329 -~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 329 -LASLSKMDSADFANQVI 345 (347)
T ss_dssp -GGGCTTCSEESSSCC--
T ss_pred -hhhhhccceeehhhhcc
Confidence 66788999999999863
No 271
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-37 Score=355.82 Aligned_cols=258 Identities=21% Similarity=0.289 Sum_probs=198.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcC---CCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDE---GKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. ++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------~~ 463 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------EN 463 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------SS
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------cC
Confidence 467888999999999999999854 35679999986432 223467889999999999999999999852 23
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vk 531 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR---------KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 531 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT---------TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEE
T ss_pred ceEEEEEcCCCCcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEE
Confidence 579999999999999998633 23578899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhhhhhh
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 634 (741)
|+|||++.......... .....+|+.|+||| +..+..++.++|||||||++|||++ |..||...... .....
T Consensus 532 L~DFG~a~~~~~~~~~~-~~~~~~t~~y~aPE-~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~--- 604 (656)
T 2j0j_A 532 LGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGR--- 604 (656)
T ss_dssp ECCCCCCCSCCC-----------CCGGGCCHH-HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH---
T ss_pred EEecCCCeecCCCccee-ccCCCCCcceeCHH-HhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH---
Confidence 99999998765443222 12234778999995 4456688999999999999999997 99998632111 00000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHHHHHHHHh
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQSIKSI 709 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 709 (741)
+.+..... .+..+++.+.+++.+||..||++|||+.|+++.|+.+.+.
T Consensus 605 --------i~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 605 --------IENGERLP-------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --------HHHTCCCC-------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHcCCCCC-------------------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 00000000 0113456788999999999999999999999999998764
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.3e-36 Score=316.98 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=188.8
Q ss_pred cccEEEccCCcccc--cCCccccCCCCccEEEccc-ccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCccccee
Q 037916 105 TLETLIFNSNKIFR--SIPAGIGKFINLQTLHMWD-NQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQL 181 (741)
Q Consensus 105 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 181 (741)
+++.|+|++|++.+ .+|..|.++++|++|+|++ |.+++..|..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 56666666666655 5666666666777777763 66666666667777777777777777766666667777777777
Q ss_pred eccCcccccccCcccccCCCCCEEeccCccccccCCccccccc-cceeEEEcCCCccCCCCChhhcCCCCCcEEEecccc
Q 037916 182 YLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLT-SLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNM 260 (741)
Q Consensus 182 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 260 (741)
+|++|.+++.+|..|..+++|++|+|++|++++.+|..+..++ +|+. |+|++|++++..|..|..++ |++|+|++|.
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~-L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS-MTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCE-EECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcE-EECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 7777777666677777777777777777777767777777776 6665 77777777767777777776 7777777777
Q ss_pred ccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc
Q 037916 261 LECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 261 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
+++..+..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 7777777777777888888888888765554 777788888888888888788888888888888888888888888877
Q ss_pred cccCCcccccccCCCCccccC
Q 037916 341 GVFKNASAISVFGNSKLCGGI 361 (741)
Q Consensus 341 ~~~~~~~~~~~~~n~~~c~~~ 361 (741)
+.++.+..+++.+|++.|+.+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTT
T ss_pred ccccccChHHhcCCCCccCCC
Confidence 777888888888888888864
No 273
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.5e-37 Score=327.12 Aligned_cols=258 Identities=21% Similarity=0.237 Sum_probs=173.4
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-CcchhHHHHHH-HHHhcCCCceeeEeeeecCccccCCceEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECS-ALRNIRHKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
.|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+..|+. +++.++||||+++++++ ......+
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~-----~~~~~~~ 97 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-----FREGDCW 97 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE-----ECSSEEE
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE-----EeCCceE
Confidence 47788899999999999999998999999999974322 22334555665 66778999999999995 4456889
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEee
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVAD 558 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 558 (741)
+||||+++ +|.+++..... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|
T Consensus 98 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYS-----VLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHH-----TTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECC
T ss_pred EEEeecCC-ChHHHHHHHHh-----hhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEcc
Confidence 99999964 88777642100 01245888999999999999999999842 899999999999999999999999
Q ss_pred cccccccCCCCcccccccccccccccCccccc---CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhc
Q 037916 559 FGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG---LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635 (741)
Q Consensus 559 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~---~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 635 (741)
||.+......... ....||+.|+|||.+. .+..++.++|||||||++|+|++|+.||.........+.......
T Consensus 170 fg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 246 (327)
T 3aln_A 170 FGISGQLVDSIAK---TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246 (327)
T ss_dssp CSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSC
T ss_pred CCCceeccccccc---ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCC
Confidence 9999866543221 2235899999996542 456689999999999999999999999864322111111111100
Q ss_pred CCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 636 LPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 636 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
.+. +.. ... ..++..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~----~~~-~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PPQ----LSN-SEE----------------------REFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCC----CCC-CSS----------------------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCC----CCC-ccc----------------------ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000 000 000 022456889999999999999999999976
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-35 Score=311.50 Aligned_cols=299 Identities=18% Similarity=0.223 Sum_probs=244.1
Q ss_pred cCChhhhhCCC-----CCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEE
Q 037916 11 GIPLDFGFTLP-----NLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLD 85 (741)
Q Consensus 11 ~ip~~~~~~l~-----~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~ 85 (741)
.+|..+....| +++.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++ |++|+
T Consensus 18 ~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~----------L~~L~ 84 (332)
T 2ft3_A 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQH----------LYALV 84 (332)
T ss_dssp -------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTT----------CCEEE
T ss_pred cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCC----------CcEEE
Confidence 57766654333 6899999999998 5566553 68999999999999888888888876 99999
Q ss_pred CcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCC
Q 037916 86 INNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLS 165 (741)
Q Consensus 86 Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 165 (741)
|++|+|++..|..|..++ +|++|+|++|++.. +|..+. ++|++|+|++|+|+++.+..|.++++|++|++++|.++
T Consensus 85 L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 85 LVNNKISKIHEKAFSPLR-KLQKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp CCSSCCCEECGGGSTTCT-TCCEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CCCCccCccCHhHhhCcC-CCCEEECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 999999988888898888 89999999999864 444444 68999999999999888888999999999999999996
Q ss_pred C--cCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCCh
Q 037916 166 G--NIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPT 243 (741)
Q Consensus 166 ~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~ 243 (741)
. ..+..|..+ +|++|++++|++++ +|..+. ++|++|+|++|++++..+..|.++++|+. |+|++|++++..+.
T Consensus 161 ~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~-L~L~~N~l~~~~~~ 235 (332)
T 2ft3_A 161 NSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYR-LGLGHNQIRMIENG 235 (332)
T ss_dssp GGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSC-CBCCSSCCCCCCTT
T ss_pred cCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCE-EECCCCcCCcCChh
Confidence 3 677888888 99999999999985 455443 78999999999999777788999999987 99999999988888
Q ss_pred hhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccC------ccCCeeeCCCCcCC--Cccch
Q 037916 244 EVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSL------RGLRVLDLSQNNIS--GEIPK 315 (741)
Q Consensus 244 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~~~ 315 (741)
.|..+++|+.|+|++|+++. .|..+..+++|+.|++++|+|++..+..|..+ +.|+.|++++|.+. +..|.
T Consensus 236 ~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~ 314 (332)
T 2ft3_A 236 SLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPA 314 (332)
T ss_dssp GGGGCTTCCEEECCSSCCCB-CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGG
T ss_pred HhhCCCCCCEEECCCCcCee-cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcc
Confidence 89999999999999999984 56668889999999999999998877777653 67889999999987 67788
Q ss_pred hhhccccCCcccccCcc
Q 037916 316 FLVELQLVQNLNLSYND 332 (741)
Q Consensus 316 ~~~~l~~L~~L~l~~N~ 332 (741)
.|..+++|+.+++++|.
T Consensus 315 ~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 315 TFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGTTBCCSTTEEC----
T ss_pred cccccchhhhhhccccc
Confidence 88899999999998884
No 275
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.4e-37 Score=329.69 Aligned_cols=200 Identities=23% Similarity=0.279 Sum_probs=163.7
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CC-----ceeeEeeeecCcccc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HK-----NLVKILTVCSGVDYK 472 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hp-----nIv~~~~~~~~~~~~ 472 (741)
..+|++.+.||+|+||.||+|++..+++.||||+++.. ......+..|+.+++.+. |+ +|+++++++ .
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-----~ 126 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF-----M 126 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE-----E
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee-----c
Confidence 35688999999999999999999999999999999632 223456677888888874 44 499999984 4
Q ss_pred CCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeC--C
Q 037916 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLD--H 550 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~--~ 550 (741)
.....|+||||+. ++|.+++.... ...+++..+..++.|++.||.|||+. ..||+||||||+|||++ .
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~ 196 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTN--------FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPK 196 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTT--------TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTT
T ss_pred cCCceEEEEecCC-CCHHHHHhhcC--------cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCC
Confidence 4568999999995 59999986431 13478999999999999999999942 22999999999999995 4
Q ss_pred CCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCc
Q 037916 551 EMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDI 620 (741)
Q Consensus 551 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~ 620 (741)
++.+||+|||++....... ....||+.|+||| +..+..++.++||||+||++|||++|+.||..
T Consensus 197 ~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE-~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 197 RSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPE-VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp SCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCcEEEEeccCceeccccc-----ccccCCccccChH-HHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7789999999998764332 2246899999995 55666799999999999999999999999974
No 276
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.6e-35 Score=311.75 Aligned_cols=297 Identities=24% Similarity=0.363 Sum_probs=259.6
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
++++|.+. .+|. +. .+++|++|+|++|+|+++.+ |.++++|++|+|++|+++.. ..|..+++ |
T Consensus 50 ~l~~~~i~-~~~~-~~-~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~----------L 112 (347)
T 4fmz_A 50 VVAGEKVA-SIQG-IE-YLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN----------L 112 (347)
T ss_dssp ECCSSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT----------C
T ss_pred EEeCCccc-cchh-hh-hcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc----------C
Confidence 57788887 6664 55 79999999999999996544 99999999999999999953 36777766 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|++++|++++..+ +..+. +|++|++++|...... ..+..+++|++|++++|.+++..+ +..+++|++|++++
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~-~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLT-KMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNY 186 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCT-TCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTT
T ss_pred CEEECcCCcccCchh--hccCC-ceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccC
Confidence 999999999996644 77887 9999999999765544 449999999999999999986654 89999999999999
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|++++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++. +. +..+++|+. |++++|.+++.
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~-L~l~~n~l~~~- 258 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTW-LEIGTNQISDI- 258 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCE-EECCSSCCCCC-
T ss_pred Cccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCE-EECCCCccCCC-
Confidence 99986544 8999999999999999986655 88999999999999999854 44 899999998 99999999854
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ 321 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 321 (741)
..+..+++|++|++++|+++++ ..+..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..| +..++
T Consensus 259 -~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~ 333 (347)
T 4fmz_A 259 -NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLS 333 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCT
T ss_pred -hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhh
Confidence 4789999999999999999976 568999999999999999999999999999999999999999998766 88999
Q ss_pred cCCcccccCcccc
Q 037916 322 LVQNLNLSYNDLE 334 (741)
Q Consensus 322 ~L~~L~l~~N~l~ 334 (741)
+|+.|++++|+++
T Consensus 334 ~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 334 KMDSADFANQVIK 346 (347)
T ss_dssp TCSEESSSCC---
T ss_pred ccceeehhhhccc
Confidence 9999999999986
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.8e-37 Score=330.01 Aligned_cols=283 Identities=17% Similarity=0.232 Sum_probs=197.9
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-----------CCceeeEeeeecC
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-----------HKNLVKILTVCSG 468 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~~~~~~~~ 468 (741)
.+|++.+.||+|+||.||+|++..+++.||+|+++.. ....+.+.+|+.+++++. ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4688899999999999999999989999999999632 223456778999998875 8999999998643
Q ss_pred ccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe
Q 037916 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548 (741)
Q Consensus 469 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll 548 (741)
.. .+....++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ ||+||||||+||++
T Consensus 98 ~~-~~~~~~~lv~e~~-~~~L~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll 165 (373)
T 1q8y_A 98 KG-PNGVHVVMVFEVL-GENLLALIKKYE--------HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLM 165 (373)
T ss_dssp EE-TTEEEEEEEECCC-CEEHHHHHHHTT--------TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEE
T ss_pred cC-CCCceEEEEEecC-CCCHHHHHHHhh--------ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEE
Confidence 21 2334789999999 889999986431 234888999999999999999999843 89999999999999
Q ss_pred C------CCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccc
Q 037916 549 D------HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMF 622 (741)
Q Consensus 549 ~------~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~ 622 (741)
+ ..+.+||+|||.+....... ....||+.|+||| +..+..++.++||||+||++|||++|+.||....
T Consensus 166 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE-~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 166 EIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPE-VLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp EEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHH-HHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred eccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcH-HHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 4 34589999999998764321 2246899999995 4556678999999999999999999999997432
Q ss_pred cCC-----cchhhhhhhc--CCcc-------hhHhhhhc-ccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccc
Q 037916 623 EGN-----MNLHNFARTV--LPDH-------VMDIVDST-LLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSM 687 (741)
Q Consensus 623 ~~~-----~~~~~~~~~~--~~~~-------~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 687 (741)
... ..+....... .+.. ...+++.. ..........................+.+.+.+++.+||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 319 (373)
T 1q8y_A 240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319 (373)
T ss_dssp -----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC
T ss_pred ccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc
Confidence 111 0111111100 0000 00000000 0000000000001111112222345677889999999999
Q ss_pred cCCCCCCCHHHHHH
Q 037916 688 ESPQDRMNMTIVVH 701 (741)
Q Consensus 688 ~dP~~RPs~~evl~ 701 (741)
.||++|||+.|+++
T Consensus 320 ~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 320 LDPRKRADAGGLVN 333 (373)
T ss_dssp SSTTTCBCHHHHHT
T ss_pred cCccccCCHHHHhh
Confidence 99999999999987
No 278
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.9e-37 Score=345.92 Aligned_cols=288 Identities=22% Similarity=0.237 Sum_probs=201.3
Q ss_pred HHHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeecc-CcCcchhHHHHHHHHHhcCCCceeeEeeeecCcc-ccCC
Q 037916 397 LLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLL-HHGASKSSIAECSALRNIRHKNLVKILTVCSGVD-YKGD 474 (741)
Q Consensus 397 ~~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-~~~~ 474 (741)
..+++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|+.++++++||||+++++++.... +...
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 4458999999999999999999999989999999998643 2223456788999999999999999999865422 2236
Q ss_pred ceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCc-
Q 037916 475 DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT- 553 (741)
Q Consensus 475 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~- 553 (741)
...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~-------~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~ 160 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQR 160 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSS-------CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcc-------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCc
Confidence 67899999999999999987541 123578889999999999999999999 9999999999999987664
Q ss_pred --eEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhh
Q 037916 554 --AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF 631 (741)
Q Consensus 554 --~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~ 631 (741)
+||+|||.+......... ....||+.|+|| |+..+..++.++||||+||++|+|++|..||.... ....|
T Consensus 161 ~~vKL~DFG~a~~~~~~~~~---~~~~gt~~Y~AP-E~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~ 232 (676)
T 3qa8_A 161 LIHKIIDLGYAKELDQGELC---TEFVGTLQYLAP-ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQW 232 (676)
T ss_dssp CEEEECSCCCCCBTTSCCCC---CCCCSCCTTCSS-CSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHS
T ss_pred eeEEEccccccccccccccc---ccccCCcccCCh-HHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhh
Confidence 999999999876544322 235689999999 55567789999999999999999999999986321 11111
Q ss_pred hhhcCCcchhH-hhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHH-----HHHHHHH
Q 037916 632 ARTVLPDHVMD-IVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTI-----VVHELQS 705 (741)
Q Consensus 632 ~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~ 705 (741)
........... .......+.......... ........++.+.+++.+||.+||++|||+.| ..+.+++
T Consensus 233 ~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~------p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~ 306 (676)
T 3qa8_A 233 HGKVREKSNEHIVVYDDLTGAVKFSSVLPT------PNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDS 306 (676)
T ss_dssp STTCC------CCSCCCCSSSCCCCSSSCC------SCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHH
T ss_pred hhhhhcccchhhhhhhhhccccccccccCC------chhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHH
Confidence 11111100000 000000000000000000 00011134567889999999999999999988 4566666
Q ss_pred HHH
Q 037916 706 IKS 708 (741)
Q Consensus 706 i~~ 708 (741)
+.+
T Consensus 307 iL~ 309 (676)
T 3qa8_A 307 ILS 309 (676)
T ss_dssp HHC
T ss_pred HHh
Confidence 664
No 279
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-35 Score=340.30 Aligned_cols=332 Identities=23% Similarity=0.258 Sum_probs=274.8
Q ss_pred cCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc
Q 037916 11 GIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN 90 (741)
Q Consensus 11 ~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~ 90 (741)
.||+++. +++++|||++|+|+++.+.+|.++++|++|+|++|+|+++.|++|.++++ |++|+|++|+
T Consensus 45 ~vP~~lp---~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~----------L~~L~Ls~N~ 111 (635)
T 4g8a_A 45 KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSH----------LSTLILTGNP 111 (635)
T ss_dssp SCCSSSC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTT----------CCEEECTTCC
T ss_pred ccCCCCC---cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCC----------CCEEEccCCc
Confidence 6777766 78999999999999999999999999999999999999888999999987 9999999999
Q ss_pred CcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEccccccccc-CCccccCCCcCcEEEcccCCCCCcCc
Q 037916 91 FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT-ISPAIGELQNLVTLAINTNKLSGNIP 169 (741)
Q Consensus 91 l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~ 169 (741)
|+++.+..|.++. +|++|+|++|++.++.+..|+++++|++|+|++|+|+++ .|..+..+++|++|+|++|+|+++.+
T Consensus 112 l~~l~~~~f~~L~-~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 112 IQSLALGAFSGLS-SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCEECGGGGTTCT-TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCCHHHhcCCC-CCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 9988888999998 999999999999998888999999999999999999875 47888999999999999999987766
Q ss_pred ccccCCccc-----------------------------------------------------------------------
Q 037916 170 PSIGNLKKL----------------------------------------------------------------------- 178 (741)
Q Consensus 170 ~~~~~l~~L----------------------------------------------------------------------- 178 (741)
..|..+.++
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~ 270 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 270 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccc
Confidence 655433222
Q ss_pred ------------------------------------------------------------ceeeccCcccccccCc----
Q 037916 179 ------------------------------------------------------------LQLYLIENFLQVSIPS---- 194 (741)
Q Consensus 179 ------------------------------------------------------------~~L~L~~N~i~~~~~~---- 194 (741)
+.|++.+|.+....+.
T Consensus 271 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 350 (635)
T 4g8a_A 271 DKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKS 350 (635)
T ss_dssp CTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTT
T ss_pred cccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchh
Confidence 2222222222211111
Q ss_pred ---------------ccccCCCCCEEeccCccccc-------------------------cCCccccccccceeEEEcCC
Q 037916 195 ---------------SLGQCQSLTTINLSYNNLSG-------------------------TIPPQLMDLTSLSVGLDLSR 234 (741)
Q Consensus 195 ---------------~~~~l~~L~~L~L~~N~l~~-------------------------~~p~~~~~l~~L~~~L~Ls~ 234 (741)
.+..+++|+.|++++|.+.. ..+..+..+++|+. ++++.
T Consensus 351 L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~-l~l~~ 429 (635)
T 4g8a_A 351 LKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEH-LDFQH 429 (635)
T ss_dssp CCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCE-EECTT
T ss_pred hhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccc-hhhhh
Confidence 11245678888888887742 12334556677776 78877
Q ss_pred CccCCCCC-hhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCcc-CCCCChhcccCccCCeeeCCCCcCCCc
Q 037916 235 NQLVGSLP-TEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLF-QGPIPLSLSSLRGLRVLDLSQNNISGE 312 (741)
Q Consensus 235 N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 312 (741)
|++....+ ..|..+++++.+++++|.+....+..+..+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+|++.
T Consensus 430 ~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l 509 (635)
T 4g8a_A 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509 (635)
T ss_dssp SEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCc
Confidence 77665544 4688899999999999999999999999999999999999975 456788999999999999999999999
Q ss_pred cchhhhccccCCcccccCcccccccCCc-cccCCcccccccCCCCc
Q 037916 313 IPKFLVELQLVQNLNLSYNDLEGVIPTE-GVFKNASAISVFGNSKL 357 (741)
Q Consensus 313 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~ 357 (741)
.|..|.++++|+.|+|++|+|++.++.. ..++.++.+++.+|...
T Consensus 510 ~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 510 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred ChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 9999999999999999999999988764 45678999999999543
No 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.9e-37 Score=327.05 Aligned_cols=198 Identities=22% Similarity=0.290 Sum_probs=163.4
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcCCC-eEEEEEEeeccCcCcchhHHHHHHHHHhcCCCc------eeeEeeeecCccc
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDEGK-TIIAVKVLNLLHHGASKSSIAECSALRNIRHKN------LVKILTVCSGVDY 471 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~~~~~~~~~~~ 471 (741)
..+|++.+.||+|+||.||+|.+..++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~----- 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF----- 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE-----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee-----
Confidence 456889999999999999999997666 79999999642 233456778999999886655 88888884
Q ss_pred cCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEe---
Q 037916 472 KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL--- 548 (741)
Q Consensus 472 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll--- 548 (741)
......++||||+ ++++.+++... ....+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKEN--------NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecc
Confidence 4556899999999 66777776532 113588999999999999999999999 99999999999999
Q ss_pred ----------------CCCCceEEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHH
Q 037916 549 ----------------DHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612 (741)
Q Consensus 549 ----------------~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~ell 612 (741)
+.++.+||+|||.+....... ....||+.|+||| +..+..++.++||||+||++|||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE-~~~~~~~~~~~Di~slG~il~el~ 233 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPE-VILELGWAQPCDVWSIGCILFEYY 233 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHH-HHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCe-eeecCCCCCccchHHHHHHHHHHH
Confidence 567899999999998654322 2246899999994 555778899999999999999999
Q ss_pred cCCCCCCc
Q 037916 613 TRKRPSDI 620 (741)
Q Consensus 613 tg~~p~~~ 620 (741)
+|..||..
T Consensus 234 ~g~~pf~~ 241 (355)
T 2eu9_A 234 RGFTLFQT 241 (355)
T ss_dssp HSSCSCCC
T ss_pred hCCCCCCC
Confidence 99999973
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.7e-35 Score=312.03 Aligned_cols=283 Identities=20% Similarity=0.248 Sum_probs=253.6
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|+++|.+. .+|..++ ++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++ |
T Consensus 39 ~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~----------L 104 (332)
T 2ft3_A 39 QCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK----------L 104 (332)
T ss_dssp ECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT----------C
T ss_pred ECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC----------C
Confidence 57788887 8898876 89999999999999998999999999999999999999888999999986 9
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccc--cCCccccCCCcCcEEEc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG--TISPAIGELQNLVTLAI 159 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L 159 (741)
++|+|++|+++.+ |..+. . +|++|++++|++....+..|..+++|++|+|++|.++. ..+..|..+ +|++|++
T Consensus 105 ~~L~L~~n~l~~l-~~~~~--~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l 179 (332)
T 2ft3_A 105 QKLYISKNHLVEI-PPNLP--S-SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRI 179 (332)
T ss_dssp CEEECCSSCCCSC-CSSCC--T-TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBC
T ss_pred CEEECCCCcCCcc-Ccccc--c-cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEEC
Confidence 9999999999954 44433 3 89999999999998888889999999999999999964 778889988 9999999
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCC
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVG 239 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~ 239 (741)
++|++++ +|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+. |+|++|+++
T Consensus 180 ~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~- 254 (332)
T 2ft3_A 180 SEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRE-LHLDNNKLS- 254 (332)
T ss_dssp CSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCE-EECCSSCCC-
T ss_pred cCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCE-EECCCCcCe-
Confidence 9999996 455544 78999999999999988899999999999999999999888889999999998 999999999
Q ss_pred CCChhhcCCCCCcEEEeccccccchhhhhcccc------ccccEEEeCCCccC--CCCChhcccCccCCeeeCCCCc
Q 037916 240 SLPTEVGKLINLEILFISRNMLECEILSTLGSC------IKLEQLKLGGNLFQ--GPIPLSLSSLRGLRVLDLSQNN 308 (741)
Q Consensus 240 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 308 (741)
.+|..+..+++|++|++++|+|+.+.+..|... .+|+.|++++|.+. +..|.+|..+++|+.|+|++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 778889999999999999999999988888764 67999999999998 7888999999999999999985
No 282
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.5e-36 Score=313.56 Aligned_cols=253 Identities=32% Similarity=0.495 Sum_probs=231.2
Q ss_pred CCccEEECcCCcCcc--cCCchhhcccccccEEEccC-CcccccCCccccCCCCccEEEcccccccccCCccccCCCcCc
Q 037916 79 QHLKHLDINNNNFGG--LLPGCICNFSITLETLIFNS-NKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLV 155 (741)
Q Consensus 79 ~~L~~L~Ls~N~l~~--~~~~~~~~l~~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 155 (741)
.+++.|+|++|++++ .+|..+..++ +|++|+|++ |++.+.+|..|.++++|++|+|++|+|++..|..|.++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 358899999999988 7888888888 899999995 888888899999999999999999999988899999999999
Q ss_pred EEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCC-CCCEEeccCccccccCCccccccccceeEEEcCC
Q 037916 156 TLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQ-SLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSR 234 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~ 234 (741)
+|+|++|++++.+|..|..+++|++|+|++|++++.+|..|..++ +|++|+|++|++++.+|..+..+. |+. |+|++
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~-L~Ls~ 206 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAF-VDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSE-EECCS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccE-EECcC
Confidence 999999999988999999999999999999999988999999998 999999999999999999999887 887 99999
Q ss_pred CccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccc
Q 037916 235 NQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIP 314 (741)
Q Consensus 235 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (741)
|.+++..|..|..+++|+.|+|++|.+++..+. +..+++|++|+|++|++++.+|..|..+++|+.|+|++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999989999999999999999999999876665 8889999999999999999999999999999999999999998888
Q ss_pred hhhhccccCCcccccCcc-cccc
Q 037916 315 KFLVELQLVQNLNLSYND-LEGV 336 (741)
Q Consensus 315 ~~~~~l~~L~~L~l~~N~-l~~~ 336 (741)
.. ..+++|+.|++++|+ +.+.
T Consensus 286 ~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CS-TTGGGSCGGGTCSSSEEEST
T ss_pred CC-ccccccChHHhcCCCCccCC
Confidence 86 889999999999998 5554
No 283
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=324.12 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=174.5
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC-cc-hhHHHHHHHHHhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG-AS-KSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|++.+.||+|+||.||+|.+..+++.||+|+++..... .. +.+..+..+++.++||||+++++++ ......
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~~~ 99 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNTDV 99 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCCcE
Confidence 4678889999999999999999989999999999743321 11 2233444567788999999999995 445689
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCeEeCCCCceEE
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH-DCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
++||||+ ++.+..+.... ...+++..+..++.|++.||.|||+ . ||+||||||+||+++.++.+||
T Consensus 100 ~lv~e~~-~~~~~~l~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl 166 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRM---------QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKL 166 (318)
T ss_dssp EEEECCC-SEEHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEecc-CCcHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEE
Confidence 9999999 55665554321 2457889999999999999999998 6 9999999999999999999999
Q ss_pred eecccccccCCCCcccccccccccccccCccccc----CCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhh
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG----LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~----~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 632 (741)
+|||.+......... ....||+.|+|||.+. ....++.++||||+||++|+|++|+.||.........+....
T Consensus 167 ~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (318)
T 2dyl_A 167 CDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243 (318)
T ss_dssp CCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred EECCCchhccCCccc---cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh
Confidence 999999765443221 2245899999996553 355688999999999999999999999863211111111111
Q ss_pred hhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 633 RTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 633 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
....+ ..... ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~----------~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 244 QEEPP----------LLPGH-------------------MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HSCCC----------CCCSS-------------------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccCCC----------CCCcc-------------------CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 10000 00000 0224568899999999999999999999863
No 284
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.6e-35 Score=309.39 Aligned_cols=289 Identities=18% Similarity=0.246 Sum_probs=239.1
Q ss_pred CCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhc
Q 037916 22 NLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICN 101 (741)
Q Consensus 22 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 101 (741)
++++++++++.++ .+|..+. ++|++|+|++|+|++..+..|.++++ |++|+|++|++++..|..|..
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~----------L~~L~L~~n~l~~~~~~~~~~ 98 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKN----------LHTLILINNKISKISPGAFAP 98 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTT----------CCEEECCSSCCCCBCTTTTTT
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCC----------CCEEECCCCcCCeeCHHHhcC
Confidence 7888999999888 4565553 68889999999999777778888876 999999999999888888888
Q ss_pred ccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCC--cCcccccCCcccc
Q 037916 102 FSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSG--NIPPSIGNLKKLL 179 (741)
Q Consensus 102 l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~ 179 (741)
+. +|++|+|++|++.. +|..+. ++|++|++++|+|+++.+..|.++++|++|+|++|+++. ..+..|.++++|+
T Consensus 99 l~-~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 99 LV-KLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp CT-TCCEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CC-CCCEEECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 88 89999999998864 444443 689999999999998888888999999999999999864 6777888899999
Q ss_pred eeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRN 259 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 259 (741)
+|++++|.++. +|..+. ++|++|++++|++++..|..|..+++|+. |+|++|.+++..+..|..+++|++|+|++|
T Consensus 175 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 250 (330)
T 1xku_A 175 YIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAK-LGLSFNSISAVDNGSLANTPHLRELHLNNN 250 (330)
T ss_dssp EEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCE-EECCSSCCCEECTTTGGGSTTCCEEECCSS
T ss_pred EEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCE-EECCCCcCceeChhhccCCCCCCEEECCCC
Confidence 99999999884 454443 78999999999998888888999999987 999999998877778889999999999999
Q ss_pred cccchhhhhccccccccEEEeCCCccCCCCChhcccC------ccCCeeeCCCCcCCC--ccchhhhccccCCcccccCc
Q 037916 260 MLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSL------RGLRVLDLSQNNISG--EIPKFLVELQLVQNLNLSYN 331 (741)
Q Consensus 260 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N 331 (741)
+++ ..|..+..+++|++|++++|+|+++.+..|... +.|+.|++++|.+.. ..|..|..+..++.++|++|
T Consensus 251 ~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 251 KLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred cCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 998 456678888999999999999998877777543 788899999999864 67788999999999999998
Q ss_pred c
Q 037916 332 D 332 (741)
Q Consensus 332 ~ 332 (741)
+
T Consensus 330 ~ 330 (330)
T 1xku_A 330 K 330 (330)
T ss_dssp -
T ss_pred C
Confidence 5
No 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.6e-37 Score=335.09 Aligned_cols=255 Identities=19% Similarity=0.219 Sum_probs=179.1
Q ss_pred HHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCceEEEEE
Q 037916 403 LFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDDFKALVY 481 (741)
Q Consensus 403 ~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~lv~ 481 (741)
.+.+.||+|+||+||.+.. .+|+.||||++... ..+.+.+|+.+++++ +||||++++++ +.++...|+||
T Consensus 18 ~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~-----~~~~~~~~lv~ 88 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCS-----ETTDRFLYIAL 88 (434)
T ss_dssp EEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEE-----EECSSEEEEEE
T ss_pred eccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEE-----EecCCeEEEEE
Confidence 3457799999999987644 47899999998642 245678899999876 89999999998 45567899999
Q ss_pred ecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCC----------
Q 037916 482 EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---------- 551 (741)
Q Consensus 482 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~---------- 551 (741)
||+. |+|.+++........ .....++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDE---NLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp CCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred ecCC-CCHHHHHhccCCCch---hhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9995 699999975421110 001123345678999999999999999 99999999999999654
Q ss_pred ---CceEEeecccccccCCCCccc--ccccccccccccCcccccC------CCCCCCccCchhHHHHHHHHHc-CCCCCC
Q 037916 552 ---MTAHVADFGLAKLLPPAHLQT--SSIGVKGTIGYIAPAEYGL------GSEVSINGDVYSYGILLLELMT-RKRPSD 619 (741)
Q Consensus 552 ---~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPEe~~~------~~~~~~~~DIwSlG~il~ellt-g~~p~~ 619 (741)
+.+||+|||++.......... ......||+.|+|||.+.. ...++.++||||+||++|||++ |..||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 489999999998776543211 1223569999999965533 2678999999999999999999 999986
Q ss_pred ccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHH
Q 037916 620 IMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIV 699 (741)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 699 (741)
...... ........... .. ... .....+..+.+++.+||+.||++|||+.||
T Consensus 242 ~~~~~~---~~i~~~~~~~~-------~~-~~~-----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 293 (434)
T 2rio_A 242 DKYSRE---SNIIRGIFSLD-------EM-KCL-----------------HDRSLIAEATDLISQMIDHDPLKRPTAMKV 293 (434)
T ss_dssp STTTHH---HHHHHTCCCCC-------CC-TTC-----------------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CchhhH---HHHhcCCCCcc-------cc-ccc-----------------ccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence 322111 11111110000 00 000 012455678899999999999999999999
Q ss_pred HH
Q 037916 700 VH 701 (741)
Q Consensus 700 l~ 701 (741)
++
T Consensus 294 l~ 295 (434)
T 2rio_A 294 LR 295 (434)
T ss_dssp HT
T ss_pred Hh
Confidence 85
No 286
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=331.34 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=177.3
Q ss_pred HHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCceEEE
Q 037916 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 401 ~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
.|.+.+.||+|+||.||.... .+++.||||++.. .......+|+.+++.+ +|||||++++++ .+....|+
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~---~~~~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~~l 95 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILP---ECFSFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQYI 95 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECT---TTEEECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEEEE
T ss_pred EEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECH---HHHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEEEE
Confidence 367778999999999764333 3688999999863 2234567899999999 799999999984 45668999
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC-----CCce
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH-----EMTA 554 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~-----~~~~ 554 (741)
||||+. |+|.+++.... ....+..++.++.||+.||+|||+. +|+||||||+||+++. ...+
T Consensus 96 v~E~~~-g~L~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~ 162 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD---------FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKA 162 (432)
T ss_dssp EEECCS-EEHHHHHHSSS---------CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCE
T ss_pred EEECCC-CCHHHHHHhcC---------CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeE
Confidence 999995 69999987542 1233345678999999999999999 9999999999999953 2368
Q ss_pred EEeecccccccCCCCc-ccccccccccccccCcccccC--CCCCCCccCchhHHHHHHHHHc-CCCCCCccccCCcchhh
Q 037916 555 HVADFGLAKLLPPAHL-QTSSIGVKGTIGYIAPAEYGL--GSEVSINGDVYSYGILLLELMT-RKRPSDIMFEGNMNLHN 630 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPEe~~~--~~~~~~~~DIwSlG~il~ellt-g~~p~~~~~~~~~~~~~ 630 (741)
||+|||+|+....... ........||+.|+|||.+.. ...++.++||||+||++|||++ |..||....... ..
T Consensus 163 kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~ 239 (432)
T 3p23_A 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---AN 239 (432)
T ss_dssp EECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HH
T ss_pred EEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HH
Confidence 8999999987654321 122233569999999965543 4567889999999999999999 899985221110 00
Q ss_pred hhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHH
Q 037916 631 FARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701 (741)
Q Consensus 631 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 701 (741)
........ ... . ........+.+++.+||+.||++|||+.||++
T Consensus 240 ~~~~~~~~---~~~----~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 240 ILLGACSL---DCL----H--------------------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHTTCCCC---TTS----C--------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccCCc---ccc----C--------------------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00000000 000 0 00123445779999999999999999999983
No 287
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.9e-35 Score=323.72 Aligned_cols=301 Identities=28% Similarity=0.365 Sum_probs=258.9
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|.+.+ +|. +. .+++|++|+|++|++++..+ |.++++|++|+|++|++++..+ |..+++ |
T Consensus 74 ~Ls~n~l~~-~~~-~~-~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~----------L 136 (466)
T 1o6v_A 74 NFSNNQLTD-ITP-LK-NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTN----------L 136 (466)
T ss_dssp ECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTT----------C
T ss_pred ECCCCccCC-chh-hh-ccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCC----------C
Confidence 688999884 454 54 89999999999999986655 8999999999999999986533 777765 8
Q ss_pred cEEECcCCcCcccCC-------------------chhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccc
Q 037916 82 KHLDINNNNFGGLLP-------------------GCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG 142 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~-------------------~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~ 142 (741)
++|++++|++++... ..+..++ +|++|++++|.+... ..+..+++|++|++++|.+++
T Consensus 137 ~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 137 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp SEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCC-CCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc
Confidence 888888888775321 1255666 899999999998664 458999999999999999997
Q ss_pred cCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccc
Q 037916 143 TISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMD 222 (741)
Q Consensus 143 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 222 (741)
..+ +..+++|++|++++|+++++ +.+..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 285 (466)
T 1o6v_A 214 ITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 285 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTT
T ss_pred ccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccC
Confidence 765 78899999999999999864 478999999999999999997665 8899999999999999995444 889
Q ss_pred cccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCee
Q 037916 223 LTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVL 302 (741)
Q Consensus 223 l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 302 (741)
+++|+. |++++|++.+..+ ++.+++|+.|+|++|++++..+ +..+++|+.|++++|++++. ..+..+++|+.|
T Consensus 286 l~~L~~-L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 286 LTALTN-LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp CTTCSE-EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCccCe-EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 999998 9999999997554 8899999999999999998766 78999999999999999975 478999999999
Q ss_pred eCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 303 DLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 303 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
++++|++++..| +..+++|+.|++++|++++.+..
T Consensus 359 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p~~ 393 (466)
T 1o6v_A 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVN 393 (466)
T ss_dssp ECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCCBC
T ss_pred eCCCCccCccch--hhcCCCCCEEeccCCcccCCchh
Confidence 999999998877 88999999999999999986543
No 288
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.2e-34 Score=304.74 Aligned_cols=288 Identities=23% Similarity=0.267 Sum_probs=224.4
Q ss_pred CCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccc
Q 037916 45 SKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI 124 (741)
Q Consensus 45 ~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~ 124 (741)
.+|++++++++.++ .+|..+.. +|++|+|++|+|++..+..|..++ +|++|+|++|++.+..|..|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~~------------~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~ 96 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLPP------------DTALLDLQNNKITEIKDGDFKNLK-NLHTLILINNKISKISPGAF 96 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCCT------------TCCEEECCSSCCCCBCTTTTTTCT-TCCEEECCSSCCCCBCTTTT
T ss_pred CCCeEEEecCCCcc-ccCccCCC------------CCeEEECCCCcCCEeChhhhccCC-CCCEEECCCCcCCeeCHHHh
Confidence 46888888888888 55655432 388888888888887777888887 88888888888888888888
Q ss_pred cCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCccccc--ccCcccccCCCC
Q 037916 125 GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQV--SIPSSLGQCQSL 202 (741)
Q Consensus 125 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L 202 (741)
..+++|++|+|++|+|+.+....+ ++|++|++++|+++++.+..|.++++|++|++++|.++. ..+..|..+++|
T Consensus 97 ~~l~~L~~L~Ls~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L 173 (330)
T 1xku_A 97 APLVKLERLYLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173 (330)
T ss_dssp TTCTTCCEEECCSSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTC
T ss_pred cCCCCCCEEECCCCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCc
Confidence 888888888888888885544333 678888888888887777788888888888888888853 667788888888
Q ss_pred CEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCC
Q 037916 203 TTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGG 282 (741)
Q Consensus 203 ~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 282 (741)
++|++++|+++ .+|..+. ++|+. |++++|++++..|..|..+++|++|+|++|.++++.+..|..+++|++|+|++
T Consensus 174 ~~L~l~~n~l~-~l~~~~~--~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 174 SYIRIADTNIT-TIPQGLP--PSLTE-LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp CEEECCSSCCC-SCCSSCC--TTCSE-EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred CEEECCCCccc-cCCcccc--ccCCE-EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCC
Confidence 88888888887 5666554 67776 88888888877788888888888888888888888878888888888888888
Q ss_pred CccCCCCChhcccCccCCeeeCCCCcCCCccchhhhcc------ccCCcccccCcccccc--cCCc-cccCCcccccccC
Q 037916 283 NLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVEL------QLVQNLNLSYNDLEGV--IPTE-GVFKNASAISVFG 353 (741)
Q Consensus 283 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~~~--~~~~-~~~~~~~~~~~~~ 353 (741)
|+++ .+|..+..+++|++|+|++|+|++..+..|... ..++.|++++|++... .|.. .....+..+++.+
T Consensus 250 N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~ 328 (330)
T 1xku_A 250 NKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGN 328 (330)
T ss_dssp SCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC--
T ss_pred CcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecc
Confidence 8888 567778888888888888888887777766543 6778888888888642 2221 2234566676666
Q ss_pred C
Q 037916 354 N 354 (741)
Q Consensus 354 n 354 (741)
|
T Consensus 329 N 329 (330)
T 1xku_A 329 Y 329 (330)
T ss_dssp -
T ss_pred c
Confidence 5
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.5e-36 Score=327.16 Aligned_cols=249 Identities=16% Similarity=0.105 Sum_probs=177.4
Q ss_pred HHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc---CcchhHHHHHHHHHhcCC-CceeeE----------------
Q 037916 403 LFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH---GASKSSIAECSALRNIRH-KNLVKI---------------- 462 (741)
Q Consensus 403 ~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-pnIv~~---------------- 462 (741)
...+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++.+.| +++..+
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 445789999999999999999999999999873222 235678899999999977 321111
Q ss_pred -----eeeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCce
Q 037916 463 -----LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537 (741)
Q Consensus 463 -----~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv 537 (741)
..++...........+++|+++ +++|.++++..... ......+++..++.++.|+++||+|||+. +|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHH---TTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1110000000122467788876 67999888421000 01235678889999999999999999999 999
Q ss_pred ecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCccccc---------CCCCCCCccCchhHHHHH
Q 037916 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG---------LGSEVSINGDVYSYGILL 608 (741)
Q Consensus 538 HrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~---------~~~~~~~~~DIwSlG~il 608 (741)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||.+. .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998865433 223457 9999996552 556688999999999999
Q ss_pred HHHHcCCCCCCccccCCcchhhhhhhcCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhccccc
Q 037916 609 LELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSME 688 (741)
Q Consensus 609 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 688 (741)
|||++|+.||........ .. .++. ... .+++.+.+++.+||+.
T Consensus 308 ~elltg~~Pf~~~~~~~~-----~~--------~~~~-----~~~-------------------~~~~~~~~li~~~l~~ 350 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----SE--------WIFR-----SCK-------------------NIPQPVRALLEGFLRY 350 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----SG--------GGGS-----SCC-------------------CCCHHHHHHHHHHTCS
T ss_pred HHHHHCCCCCCCcchhhh-----HH--------HHHh-----hcc-------------------cCCHHHHHHHHHHccC
Confidence 999999999863321110 00 0000 000 1235688999999999
Q ss_pred CCCCCCCHHHHHH
Q 037916 689 SPQDRMNMTIVVH 701 (741)
Q Consensus 689 dP~~RPs~~evl~ 701 (741)
||++|||+.|+++
T Consensus 351 dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 351 PKEDRLLPLQAME 363 (413)
T ss_dssp SGGGSCCHHHHTT
T ss_pred ChhhCcCHHHHHh
Confidence 9999999877753
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-36 Score=349.80 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=192.1
Q ss_pred HHHHHHhhhcccCceeeEEEEEEcC-CCeEEEEEEeeccC-cCcchhHHHHHHHHHhcCCCceeeEeeeecCccccCCce
Q 037916 399 FVSFLFLCWIDMGSFGSVYKGILDE-GKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 399 ~~~y~~~~~ig~G~~g~V~~a~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 476 (741)
..+|++.+.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.++++++||||+++++++......+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 4679999999999999999999975 68999999986422 223456789999999999999999999975433222233
Q ss_pred EEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEE
Q 037916 477 KALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHV 556 (741)
Q Consensus 477 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 556 (741)
.|+||||+++++|.+++. ..+++.+++.++.||+.||.|||+. ||+||||||+||+++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEE
Confidence 799999999999988764 2588999999999999999999999 99999999999999875 8999
Q ss_pred eecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhhcC
Q 037916 557 ADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVL 636 (741)
Q Consensus 557 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 636 (741)
+|||+++..... ....||+.|+|||.+. +. ++.++|||||||++|+|++|..||........
T Consensus 223 ~DFG~a~~~~~~------~~~~gt~~y~aPE~~~-~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------- 284 (681)
T 2pzi_A 223 IDLGAVSRINSF------GYLYGTPGFQAPEIVR-TG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------- 284 (681)
T ss_dssp CCCTTCEETTCC------SCCCCCTTTSCTTHHH-HC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------
T ss_pred EecccchhcccC------CccCCCccccCHHHHc-CC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------
Confidence 999999876543 2246999999996553 33 48899999999999999999888753211100
Q ss_pred CcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCC-CHHHHHHHHHHHHH
Q 037916 637 PDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM-NMTIVVHELQSIKS 708 (741)
Q Consensus 637 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~ 708 (741)
+.. . ......+.+.+++.+||+.||++|| +++++.+.+..+..
T Consensus 285 ~~~------------~-----------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 285 PED------------D-----------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp CTT------------C-----------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ccc------------c-----------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 000 0 0112345678999999999999999 56777777777654
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.4e-35 Score=309.37 Aligned_cols=236 Identities=19% Similarity=0.253 Sum_probs=178.3
Q ss_pred HHHHHh-hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHH-HhcCCCceeeEeeeecCccccCCceE
Q 037916 400 VSFLFL-CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSAL-RNIRHKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 400 ~~y~~~-~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
..|.+. +.||+|+||.||+|.+..+++.||+|+++. .....+|+.++ +..+||||+++++++... ..+....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceE
Confidence 456666 679999999999999998999999999863 35677888888 556999999999986431 1235678
Q ss_pred EEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCC---CCce
Q 037916 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDH---EMTA 554 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~---~~~~ 554 (741)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~ 159 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRG--------DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAIL 159 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCT--------TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeecCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcE
Confidence 99999999999999987431 23588999999999999999999999 9999999999999998 7899
Q ss_pred EEeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCCCccccCCcchhhhhhh
Q 037916 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART 634 (741)
Q Consensus 555 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 634 (741)
||+|||++.... +..++.++||||+||++|||++|+.||......... ......
T Consensus 160 kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~~~ 213 (299)
T 3m2w_A 160 KLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTR 213 (299)
T ss_dssp EECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCS
T ss_pred EEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-HHHHHH
Confidence 999999885321 234677899999999999999999998633211100 000000
Q ss_pred cCCcchhHhhhhcccCCcchhhhhhhhHHHHHhHhhHHHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Q 037916 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHE 702 (741)
Q Consensus 635 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 702 (741)
......... ......+++.+.+++.+||+.||++|||+.|+++-
T Consensus 214 -~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 -IRMGQYEFP-----------------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -SCTTCCSSC-----------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HhhccccCC-----------------------chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000000 00011335678899999999999999999999873
No 292
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-33 Score=310.78 Aligned_cols=291 Identities=21% Similarity=0.191 Sum_probs=167.9
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
||++|.+.+ +| .+. .+++|++|+|++|+|+++ | |+.+++|++|+|++|+|++. + |+.+++ |
T Consensus 48 ~Ls~n~l~~-~~-~l~-~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~----------L 108 (457)
T 3bz5_A 48 DCHNSSITD-MT-GIE-KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK----------L 108 (457)
T ss_dssp ECCSSCCCC-CT-TGG-GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT----------C
T ss_pred EccCCCccc-Ch-hhc-ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc----------C
Confidence 456666663 44 344 566666666666666653 2 56666666666666666643 2 555544 6
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+++++ + +..++ +|++|++++|++.+. .+..+++|++|++++|+..+.. .+..+++|++|++++
T Consensus 109 ~~L~L~~N~l~~l-~--~~~l~-~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 109 TYLNCDTNKLTKL-D--VSQNP-LLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CEEECCSSCCSCC-C--CTTCT-TCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CEEECCCCcCCee-c--CCCCC-cCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 6666666666653 2 45555 666666666666553 2556666666666666332222 355666666666666
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|+++++ | +..+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+. |++++|++++..
T Consensus 180 n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~-L~l~~N~l~~~~ 249 (457)
T 3bz5_A 180 NKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTY-FDCSVNPLTELD 249 (457)
T ss_dssp SCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSE-EECCSSCCSCCC
T ss_pred Ccccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCE-EEeeCCcCCCcC
Confidence 666643 2 56666666666666666643 25566666666666666664 44 556666665 666666666554
Q ss_pred ChhhcCCC-------CCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCCh--------hcccCccCCeeeCCC
Q 037916 242 PTEVGKLI-------NLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPL--------SLSSLRGLRVLDLSQ 306 (741)
Q Consensus 242 p~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~Ls~ 306 (741)
+..+.++. +|+.|++++|.+.+..+ ++.+++|+.|++++|...+.+|. .+.++++|+.|+|++
T Consensus 250 ~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~ 327 (457)
T 3bz5_A 250 VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNN 327 (457)
T ss_dssp CTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTT
T ss_pred HHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCC
Confidence 43333332 33334444443333222 34556666666666655443332 244556666777777
Q ss_pred CcCCCccchhhhccccCCcccccCccccc
Q 037916 307 NNISGEIPKFLVELQLVQNLNLSYNDLEG 335 (741)
Q Consensus 307 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 335 (741)
|+|++. + +..+++|+.|++++|++++
T Consensus 328 N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 328 TELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred Cccccc-c--cccCCcCcEEECCCCCCCC
Confidence 777653 2 6666677777777777665
No 293
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-33 Score=309.22 Aligned_cols=306 Identities=21% Similarity=0.170 Sum_probs=258.0
Q ss_pred cccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcC
Q 037916 9 QGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINN 88 (741)
Q Consensus 9 ~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~ 88 (741)
.+..+..+. .+++|++|+|++|.|+++ | .|..+++|++|+|++|+|++. | |..+++ |++|+|++
T Consensus 31 ~~~~~~~~~-~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~----------L~~L~Ls~ 94 (457)
T 3bz5_A 31 QATDTISEE-QLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTN----------LTYLACDS 94 (457)
T ss_dssp CTTSEEEHH-HHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTT----------CSEEECCS
T ss_pred CcccccChh-HcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCC----------CCEEECcC
Confidence 334455666 789999999999999975 5 799999999999999999965 4 777765 99999999
Q ss_pred CcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcC
Q 037916 89 NNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNI 168 (741)
Q Consensus 89 N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 168 (741)
|+|++. + +..++ +|++|++++|++.+. + +..+++|++|+|++|+|+++ .+..+++|++|++++|+..+.+
T Consensus 95 N~l~~~-~--~~~l~-~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 95 NKLTNL-D--VTPLT-KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp SCCSCC-C--CTTCT-TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC
T ss_pred CCCcee-e--cCCCC-cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc
Confidence 999976 3 77887 999999999999774 3 89999999999999999985 3889999999999999655454
Q ss_pred cccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCC
Q 037916 169 PPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKL 248 (741)
Q Consensus 169 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l 248 (741)
.+..+++|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|+. |++++|++++ +| ++.+
T Consensus 165 --~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~-L~Ls~N~l~~-ip--~~~l 232 (457)
T 3bz5_A 165 --DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTF-LDCSSNKLTE-ID--VTPL 232 (457)
T ss_dssp --CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSE-EECCSSCCSC-CC--CTTC
T ss_pred --ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCE-EECcCCcccc-cC--cccc
Confidence 588999999999999999974 4 88899999999999999964 4889999998 9999999997 55 8899
Q ss_pred CCCcEEEeccccccchhhhhccccc-------cccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccch------
Q 037916 249 INLEILFISRNMLECEILSTLGSCI-------KLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPK------ 315 (741)
Q Consensus 249 ~~L~~L~Ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~------ 315 (741)
++|+.|++++|+++++.+..+..+. +|+.|++++|.+.+.+| +..+++|+.|+|++|.+.+.+|.
T Consensus 233 ~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~ 310 (457)
T 3bz5_A 233 TQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGIT 310 (457)
T ss_dssp TTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCS
T ss_pred CCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcce
Confidence 9999999999999998766655554 45666666666665555 56789999999999987766654
Q ss_pred --hhhccccCCcccccCcccccccCCccccCCcccccccCCCC
Q 037916 316 --FLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSK 356 (741)
Q Consensus 316 --~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~ 356 (741)
.+..+++|+.|++++|++++. + ...++.++.+++.+|..
T Consensus 311 ~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~l 351 (457)
T 3bz5_A 311 ELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKLKSLSCVNAHI 351 (457)
T ss_dssp CCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTCSEEECCSSCC
T ss_pred EechhhcccCCEEECCCCccccc-c-cccCCcCcEEECCCCCC
Confidence 256678899999999999996 3 56688899999999854
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.1e-35 Score=309.37 Aligned_cols=197 Identities=19% Similarity=0.165 Sum_probs=157.7
Q ss_pred HHHHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc--------CcchhHHHHHHHHHhcC---------CCcee
Q 037916 398 LFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH--------GASKSSIAECSALRNIR---------HKNLV 460 (741)
Q Consensus 398 ~~~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------hpnIv 460 (741)
....|++.+.||+|+||.||+|++ +++.||+|+++.... ...+.+.+|+.+++.++ ||||+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred ccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 457899999999999999999998 579999999975422 12367889999998885 77777
Q ss_pred eEeeeecCc-------------------------cccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHH
Q 037916 461 KILTVCSGV-------------------------DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515 (741)
Q Consensus 461 ~~~~~~~~~-------------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~ 515 (741)
++.+++... ++.+....|+||||+++|++.+.+.. ..+++..++
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----------~~~~~~~~~ 164 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----------KLSSLATAK 164 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----------TCCCHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----------cCCCHHHHH
Confidence 666653210 01136689999999999976666532 347899999
Q ss_pred HHHHHHHHHHHHHH-hcCCCCceecCCCCCCeEeCCCC--------------------ceEEeecccccccCCCCccccc
Q 037916 516 NIAIDVACALKYLH-HDCQPTTAHCDLKPSNVLLDHEM--------------------TAHVADFGLAKLLPPAHLQTSS 574 (741)
Q Consensus 516 ~i~~qi~~aL~~LH-~~~~~~ivHrDlkp~NIll~~~~--------------------~~kL~DFg~a~~~~~~~~~~~~ 574 (741)
.++.||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 165 ~i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------ 235 (336)
T 2vuw_A 165 SILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------ 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------
T ss_pred HHHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------
Confidence 99999999999999 89 999999999999999887 8999999999865432
Q ss_pred ccccccccccCcccccCCCCCCCccCchhHHHH-HHHHHcCCCCCC
Q 037916 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGIL-LLELMTRKRPSD 619 (741)
Q Consensus 575 ~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~i-l~elltg~~p~~ 619 (741)
...||+.|+|||.+ .+.. +.++||||+|++ .+++++|..||.
T Consensus 236 -~~~gt~~y~aPE~~-~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 -IVVFCDVSMDEDLF-TGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp -EEECCCCTTCSGGG-CCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred -cEEEeecccChhhh-cCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 24699999999654 4444 889999998777 777888999974
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=100.00 E-value=4.9e-33 Score=291.14 Aligned_cols=281 Identities=22% Similarity=0.205 Sum_probs=206.1
Q ss_pred cCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccC--CccccCCCcC
Q 037916 77 CNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTI--SPAIGELQNL 154 (741)
Q Consensus 77 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L 154 (741)
|...-+.++++++.++. +|..+. .+|++|+|++|++..+.+..|.++++|++|+|++|+|+.+. +..+.++++|
T Consensus 5 C~C~~~~l~c~~~~l~~-ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 80 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTS-VPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL 80 (306)
T ss_dssp CEEETTEEECCSSCCSS-CCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC
T ss_pred CeeCCCEEEcCCCCccc-CCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccccccc
Confidence 33345677888877774 343332 27788888888877666666778888888888888877432 5666777888
Q ss_pred cEEEcccCCCCCcCcccccCCcccceeeccCcccccccC-cccccCCCCCEEeccCccccccCCccccccccceeEEEcC
Q 037916 155 VTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIP-SSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLS 233 (741)
Q Consensus 155 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls 233 (741)
++|+|++|.++ .+|..|.++++|++|++++|.+++..+ ..|..+++|++|++++|++++..|..|.++++|+. |+++
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~ 158 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-LKMA 158 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE-EECT
T ss_pred CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE-EECC
Confidence 88888888887 456667788888888888888876554 56777888888888888888777777888888876 8888
Q ss_pred CCccCC-CCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCc
Q 037916 234 RNQLVG-SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGE 312 (741)
Q Consensus 234 ~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 312 (741)
+|.+.+ ..|..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 238 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc
Confidence 888775 4677788888888888888888877778888888888888888888877777788888888888888888877
Q ss_pred cchhhhccc-cCCcccccCcccccccCCccc---cCCcccccccCCCCccccCCC
Q 037916 313 IPKFLVELQ-LVQNLNLSYNDLEGVIPTEGV---FKNASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 313 ~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~---~~~~~~~~~~~n~~~c~~~~~ 363 (741)
.|..+..++ +|+.|+|++|++++..+.... ......+.+..+...|..++.
T Consensus 239 ~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 239 KKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp SSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred CHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 777777774 788888888888776543211 223344455566677766544
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=298.13 Aligned_cols=278 Identities=15% Similarity=0.137 Sum_probs=162.5
Q ss_pred CCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhh
Q 037916 21 PNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCIC 100 (741)
Q Consensus 21 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 100 (741)
+.....++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++ |++|+|++|+|++..+..|.
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~----------L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVN----------LQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTT----------CCEEECTTSCCCEECTTTTT
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCC----------CCEEECCCCccCccCHhhcC
Confidence 33344555555555 2333332 24555555555555444444554443 55555555555554455555
Q ss_pred cccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCC-ccccCCCcCcEEEcccC-CCCCcCcccccCCccc
Q 037916 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTIS-PAIGELQNLVTLAINTN-KLSGNIPPSIGNLKKL 178 (741)
Q Consensus 101 ~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L 178 (741)
.++ +|++|+|++|++.+..+..|.++++|++|+|++|+|+++.. ..|.++++|++|++++| .++.+.+..|.++++|
T Consensus 98 ~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 176 (353)
T 2z80_A 98 SLG-SLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFL 176 (353)
T ss_dssp TCT-TCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred CCC-CCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCC
Confidence 554 55555555555544444445555555555555555554433 34555555555555555 3444444555555555
Q ss_pred ceeeccCcccccccCcccccCCCCCEEeccCccccccCCcc-ccccccceeEEEcCCCccCCCCChhh---cCCCCCcEE
Q 037916 179 LQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQ-LMDLTSLSVGLDLSRNQLVGSLPTEV---GKLINLEIL 254 (741)
Q Consensus 179 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~~L~Ls~N~l~~~~p~~~---~~l~~L~~L 254 (741)
++|++++|.+++..|..|..+++|++|++++|+++ .+|.. +..+++|+. |++++|.+++..+..+ .....++.+
T Consensus 177 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~-L~L~~n~l~~~~~~~l~~~~~~~~l~~l 254 (353)
T 2z80_A 177 EELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVEC-LELRDTDLDTFHFSELSTGETNSLIKKF 254 (353)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEE-EEEESCBCTTCCCC------CCCCCCEE
T ss_pred CEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccE-EECCCCccccccccccccccccchhhcc
Confidence 55555555555555555555555555555555554 22222 233555554 6666666554443332 235667888
Q ss_pred Eeccccccc----hhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccc
Q 037916 255 FISRNMLEC----EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIP 314 (741)
Q Consensus 255 ~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (741)
+|++|.+++ ..+..+..+++|+.|+|++|+++.+.+..|..+++|++|+|++|.+++..|
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 888887775 356778899999999999999996665667999999999999999997654
No 297
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.9e-32 Score=301.57 Aligned_cols=255 Identities=22% Similarity=0.237 Sum_probs=121.4
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCC-------------cEEEeecCcCcccCCchhhhh
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKL-------------EVFQVTSNNLTGEVPSEFGKA 68 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~~~~~~~l 68 (741)
+++.|++ +.||.+++ +|++|++|+|++|++++.+|..++++++| ++|++++|++++ +|....++
T Consensus 17 ~l~~n~l-~~iP~~i~-~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~~~~L 93 (454)
T 1jl5_A 17 LRHSSNL-TEMPVEAE-NVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPELPPHL 93 (454)
T ss_dssp -------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSCCTTC
T ss_pred hcccCch-hhCChhHh-cccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCCcCCC
Confidence 6788999 79999987 89999999999999999999999988764 888888888874 33322111
Q ss_pred hhhhhcc-------ccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEccccccc
Q 037916 69 TKAYCVQ-------NCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLS 141 (741)
Q Consensus 69 ~~~~~~~-------~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 141 (741)
..+.... ....+|++|++++|+++++.. +..+|++|++++|++.+ +| .|.++++|++|++++|+++
T Consensus 94 ~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~l~~-----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~ 166 (454)
T 1jl5_A 94 ESLVASCNSLTELPELPQSLKSLLVDNNNLKALSD-----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK 166 (454)
T ss_dssp SEEECCSSCCSSCCCCCTTCCEEECCSSCCSCCCS-----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred CEEEccCCcCCccccccCCCcEEECCCCccCcccC-----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc
Confidence 1100000 000234444444444443211 11245555555555543 33 3555555555555555555
Q ss_pred ccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccc
Q 037916 142 GTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLM 221 (741)
Q Consensus 142 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 221 (741)
++ |.. ..+|++|++++|++++ +| .|+++++|++|++++|.+++ +|... ++|++|++++|+++ .+|. +.
T Consensus 167 ~l-p~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~ 234 (454)
T 1jl5_A 167 KL-PDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQ 234 (454)
T ss_dssp CC-CCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CT
T ss_pred cc-CCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cC
Confidence 42 221 1355555555555554 23 35555555555555555553 22211 34555555555555 4442 55
Q ss_pred ccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCC
Q 037916 222 DLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQG 287 (741)
Q Consensus 222 ~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 287 (741)
.+++|+. |++++|++++ +|.. +++|+.|++++|+++++. . .+++|+.|++++|++++
T Consensus 235 ~l~~L~~-L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~-~---~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 235 NLPFLTT-IYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP-E---LPQSLTFLDVSENIFSG 291 (454)
T ss_dssp TCTTCCE-EECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSE
T ss_pred CCCCCCE-EECCCCcCCc-cccc---ccccCEEECCCCcccccC-c---ccCcCCEEECcCCccCc
Confidence 5555554 5555555553 2221 245555555555554421 1 12445555555555543
No 298
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=6e-32 Score=297.75 Aligned_cols=258 Identities=21% Similarity=0.225 Sum_probs=227.2
Q ss_pred ccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCc
Q 037916 76 NCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLV 155 (741)
Q Consensus 76 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 155 (741)
.|....+.++.+++.++ .+|..+. .+++.|+|++|+|..+.+..|.++++|++|+|++|+|+++.+..|.++++|+
T Consensus 40 ~C~~~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~ 115 (440)
T 3zyj_A 40 SCSNQFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115 (440)
T ss_dssp EECTTSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCC
T ss_pred EeCCCCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCC
Confidence 34456788999999998 4554443 3889999999999888889999999999999999999988889999999999
Q ss_pred EEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccC-ccccccCCccccccccceeEEEcCC
Q 037916 156 TLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY-NNLSGTIPPQLMDLTSLSVGLDLSR 234 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~~L~Ls~ 234 (741)
+|+|++|+|+.+.+..|.++++|++|+|++|.|+...+..|..+++|++|+|++ |.+....+..|.++++|+. |+|++
T Consensus 116 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~-L~L~~ 194 (440)
T 3zyj_A 116 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRY-LNLAM 194 (440)
T ss_dssp EEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCE-EECTT
T ss_pred EEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCe-ecCCC
Confidence 999999999988788899999999999999999988888999999999999998 4555455557889999997 99999
Q ss_pred CccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccc
Q 037916 235 NQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIP 314 (741)
Q Consensus 235 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (741)
|+|+ .+| .+..+++|+.|+|++|+|+++.+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+
T Consensus 195 n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 195 CNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp SCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred CcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 9998 445 48889999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhccccCCcccccCcccccccCCc
Q 037916 315 KFLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 315 ~~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
..|..+++|+.|+|++|++.+.....
T Consensus 273 ~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 273 DLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp TTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred hHhccccCCCEEEcCCCCccCCCCch
Confidence 88999999999999999998766543
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=8.7e-33 Score=295.36 Aligned_cols=283 Identities=19% Similarity=0.185 Sum_probs=245.8
Q ss_pred CCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCC
Q 037916 42 FNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIP 121 (741)
Q Consensus 42 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~ 121 (741)
..++...+.++++|.++ .+|..+.. +|++|+|++|+|+++.+..|..++ +|++|+|++|++.+..+
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~~------------~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~ 93 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLTE------------AVKSLDLSNNRITYISNSDLQRCV-NLQALVLTSNGINTIEE 93 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCCT------------TCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTSCCCEECT
T ss_pred CCCCCCeEeeCCCCCcc-cccccccc------------cCcEEECCCCcCcccCHHHhccCC-CCCEEECCCCccCccCH
Confidence 34566777999999999 56665543 399999999999988888899998 99999999999999889
Q ss_pred ccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCc-ccccCCcccceeeccCc-ccccccCcccccC
Q 037916 122 AGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIP-PSIGNLKKLLQLYLIEN-FLQVSIPSSLGQC 199 (741)
Q Consensus 122 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l 199 (741)
..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.+ ..|.++++|++|++++| .+....+..|.++
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 94 DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 999999999999999999998877779999999999999999996655 58999999999999999 5887788899999
Q ss_pred CCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhcc---cccccc
Q 037916 200 QSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLG---SCIKLE 276 (741)
Q Consensus 200 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~ 276 (741)
++|++|++++|++++..|..|..+++|+. |++++|.+....+..+..+++|+.|+|++|.+++..+..+. ....++
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~-L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSH-LILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEE-EEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCe-ecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 99999999999999888999999999998 99999999855445566799999999999999986655443 466788
Q ss_pred EEEeCCCccCC----CCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 277 QLKLGGNLFQG----PIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 277 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
.++|++|.+.+ .+|..+..+++|+.|+|++|+|+...+..|..+++|+.|+|++|++++.+|.
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 99999998876 3677889999999999999999965555579999999999999999988764
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.98 E-value=8.2e-32 Score=297.75 Aligned_cols=257 Identities=19% Similarity=0.181 Sum_probs=224.8
Q ss_pred cCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcE
Q 037916 77 CNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVT 156 (741)
Q Consensus 77 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 156 (741)
|......++.+++.++. +|..+. .+|+.|+|++|+|.++.+..|.++++|++|+|++|+|+++.+..|.++++|++
T Consensus 52 C~~~~~~v~c~~~~l~~-iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 127 (452)
T 3zyi_A 52 CSNQFSKVVCTRRGLSE-VPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNT 127 (452)
T ss_dssp ECSSSCEEECCSSCCSS-CCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ECCCCcEEEECCCCcCc-cCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCE
Confidence 44457889999999984 454433 38999999999998888999999999999999999999988899999999999
Q ss_pred EEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccC-ccccccCCccccccccceeEEEcCCC
Q 037916 157 LAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY-NNLSGTIPPQLMDLTSLSVGLDLSRN 235 (741)
Q Consensus 157 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~~L~Ls~N 235 (741)
|+|++|+|+.+.+..|.++++|++|+|++|.|+...+..|..+++|++|+|++ |.+....+..|.++++|+. |+|++|
T Consensus 128 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~-L~L~~n 206 (452)
T 3zyi_A 128 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKY-LNLGMC 206 (452)
T ss_dssp EECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCE-EECTTS
T ss_pred EECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCE-EECCCC
Confidence 99999999988888899999999999999999988888899999999999998 5565445557889999997 999999
Q ss_pred ccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccch
Q 037916 236 QLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPK 315 (741)
Q Consensus 236 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 315 (741)
++++. | .+..+++|+.|+|++|.|+++.+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+.
T Consensus 207 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 207 NIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHD 284 (452)
T ss_dssp CCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChH
Confidence 99854 4 588899999999999999999999999999999999999999998899999999999999999999988888
Q ss_pred hhhccccCCcccccCcccccccCCc
Q 037916 316 FLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 316 ~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
.|..+++|+.|+|++|++.+.....
T Consensus 285 ~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 285 LFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp SSTTCTTCCEEECCSSCEECSTTTH
T ss_pred HhccccCCCEEEccCCCcCCCCCch
Confidence 8899999999999999998776543
No 301
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.98 E-value=3.3e-31 Score=291.68 Aligned_cols=263 Identities=27% Similarity=0.338 Sum_probs=137.6
Q ss_pred CCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccc
Q 037916 45 SKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI 124 (741)
Q Consensus 45 ~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~ 124 (741)
++|++|+|++|++++ +| .|.++++ |++|++++|++++ +|..+ . +|++|++++|++.+ +| .|
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~----------L~~L~l~~N~l~~-lp~~~---~-~L~~L~L~~n~l~~-l~-~~ 191 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSF----------LKIIDVDNNSLKK-LPDLP---P-SLEFIAAGNNQLEE-LP-EL 191 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTT----------CCEEECCSSCCSC-CCCCC---T-TCCEEECCSSCCSS-CC-CC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCC----------CCEEECCCCcCcc-cCCCc---c-cccEEECcCCcCCc-Cc-cc
Confidence 345555555555553 33 3444443 5555555555553 22211 1 45555555555544 23 35
Q ss_pred cCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCE
Q 037916 125 GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTT 204 (741)
Q Consensus 125 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 204 (741)
.++++|++|++++|+++++. .. .++|++|++++|+++ .+| .|..+++|++|++++|++++ +|.. +++|++
T Consensus 192 ~~l~~L~~L~l~~N~l~~l~-~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~ 261 (454)
T 1jl5_A 192 QNLPFLTAIYADNNSLKKLP-DL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEA 261 (454)
T ss_dssp TTCTTCCEEECCSSCCSSCC-CC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCE
T ss_pred cCCCCCCEEECCCCcCCcCC-CC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCE
Confidence 55555555555555555422 11 135555555555555 333 25556666666666666553 2321 245666
Q ss_pred EeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhcccc-ccccEEEeCCC
Q 037916 205 INLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSC-IKLEQLKLGGN 283 (741)
Q Consensus 205 L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N 283 (741)
|++++|++++ +|..+ ++|+. |++++|++++. |. -.++|+.|++++|+++++ ..+ ++|+.|++++|
T Consensus 262 L~l~~N~l~~-l~~~~---~~L~~-L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N 327 (454)
T 1jl5_A 262 LNVRDNYLTD-LPELP---QSLTF-LDVSENIFSGL-SE---LPPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNN 327 (454)
T ss_dssp EECCSSCCSC-CCCCC---TTCCE-EECCSSCCSEE-SC---CCTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSS
T ss_pred EECCCCcccc-cCccc---CcCCE-EECcCCccCcc-cC---cCCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCC
Confidence 6666666553 44322 44554 66666666541 11 014566666666666542 123 47888888888
Q ss_pred ccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccc--ccCCc-ccc-------------CCcc
Q 037916 284 LFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEG--VIPTE-GVF-------------KNAS 347 (741)
Q Consensus 284 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~-~~~-------------~~~~ 347 (741)
++++ +|.. +++|+.|+|++|++++ +|. .+++|+.|++++|++++ .+|.. ... .+++
T Consensus 328 ~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~ 399 (454)
T 1jl5_A 328 KLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLK 399 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-------------
T ss_pred cccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCC
Confidence 8886 4433 5788888998888885 444 46788888888888888 33332 222 5677
Q ss_pred cccccCCCCcc
Q 037916 348 AISVFGNSKLC 358 (741)
Q Consensus 348 ~~~~~~n~~~c 358 (741)
.+++.+|+...
T Consensus 400 ~L~ls~N~l~~ 410 (454)
T 1jl5_A 400 QLHVETNPLRE 410 (454)
T ss_dssp -----------
T ss_pred EEECCCCcCCc
Confidence 88888886543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.1e-31 Score=280.83 Aligned_cols=279 Identities=20% Similarity=0.215 Sum_probs=175.0
Q ss_pred cEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhccc
Q 037916 24 LFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFS 103 (741)
Q Consensus 24 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 103 (741)
+.++++++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++ |++|+|++|+++...
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~----------L~~L~L~~n~l~~~~-------- 68 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQ----------LTKLSLSSNGLSFKG-------- 68 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTT----------CSEEECCSSCCCEEE--------
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhcccc----------CCEEECCCCccCccc--------
Confidence 35566666665 3333332 45666666666666443344555544 666666666555221
Q ss_pred ccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCc-ccccCCcccceee
Q 037916 104 ITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIP-PSIGNLKKLLQLY 182 (741)
Q Consensus 104 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 182 (741)
..+..+..+++|++|+|++|.++. .+..|.++++|++|+|++|++++..+ ..|..+++|++|+
T Consensus 69 ---------------~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 132 (306)
T 2z66_A 69 ---------------CCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 132 (306)
T ss_dssp ---------------EEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEE
T ss_pred ---------------CcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEE
Confidence 113334445555555555555553 23345555666666666666654433 3556666666666
Q ss_pred ccCcccccccCcccccCCCCCEEeccCccccc-cCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccc
Q 037916 183 LIENFLQVSIPSSLGQCQSLTTINLSYNNLSG-TIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNML 261 (741)
Q Consensus 183 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 261 (741)
+++|.+.+..+..|..+++|++|+|++|++++ ..|..+..+++|+. |+|++|++++..|..|..+++|++|+|++|++
T Consensus 133 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF-LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp CTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE-EECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE-EECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 66666666666666666666666666666664 46666667777766 77777777766667777777777777777777
Q ss_pred cchhhhhccccccccEEEeCCCccCCCCChhcccCc-cCCeeeCCCCcCCCccc--hhhhccccCCcccccCcccccccC
Q 037916 262 ECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLR-GLRVLDLSQNNISGEIP--KFLVELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 262 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~l~~N~l~~~~~ 338 (741)
+++.+..|..+++|+.|+|++|++++..+..+..++ +|++|+|++|.+++.-+ .....+...+.+.+..+.+.+..|
T Consensus 212 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 212 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp SBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 777676777788888888888888887888888874 88888888888875422 223334556667777788877766
Q ss_pred Cc
Q 037916 339 TE 340 (741)
Q Consensus 339 ~~ 340 (741)
..
T Consensus 292 ~~ 293 (306)
T 2z66_A 292 SD 293 (306)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 303
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.5e-34 Score=318.07 Aligned_cols=347 Identities=17% Similarity=0.112 Sum_probs=268.4
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCccccc----CCccCCCCCCCcEEEeecCcCcccCCchhhh-hhhhhhccc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGV----IPSSMFNASKLEVFQVTSNNLTGEVPSEFGK-ATKAYCVQN 76 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~~~~~~~ 76 (741)
||+.|++.......++..+++|++|+|++|+|++. ++..|..+++|++|+|++|+++...+..+.. +. .
T Consensus 9 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~------~ 82 (461)
T 1z7x_W 9 DIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ------T 82 (461)
T ss_dssp EEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC------S
T ss_pred hhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh------h
Confidence 67888888665566556899999999999999853 4677888899999999999998654444433 22 1
Q ss_pred cCCCccEEECcCCcCcc----cCCchhhcccccccEEEccCCcccccCCccc-----cCCCCccEEEcccccccccC---
Q 037916 77 CNQHLKHLDINNNNFGG----LLPGCICNFSITLETLIFNSNKIFRSIPAGI-----GKFINLQTLHMWDNQLSGTI--- 144 (741)
Q Consensus 77 ~~~~L~~L~Ls~N~l~~----~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~L~~N~i~~~~--- 144 (741)
+..+|++|+|++|+|+. .++..+..++ +|++|+|++|.+....+..+ ..+++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLP-TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCT-TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCC-ceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 11259999999999984 4577788888 99999999999865544433 23568999999999998644
Q ss_pred -CccccCCCcCcEEEcccCCCCCcCccccc-----CCcccceeeccCcccccc----cCcccccCCCCCEEeccCccccc
Q 037916 145 -SPAIGELQNLVTLAINTNKLSGNIPPSIG-----NLKKLLQLYLIENFLQVS----IPSSLGQCQSLTTINLSYNNLSG 214 (741)
Q Consensus 145 -~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~ 214 (741)
+..+..+++|++|+|++|.++...+..+. ..++|++|+|++|.++.. ++..+..+++|++|+|++|++++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 56677789999999999999765555553 366899999999999864 47778889999999999999875
Q ss_pred cC-----CccccccccceeEEEcCCCccCCC----CChhhcCCCCCcEEEeccccccchhhhhcccc-----ccccEEEe
Q 037916 215 TI-----PPQLMDLTSLSVGLDLSRNQLVGS----LPTEVGKLINLEILFISRNMLECEILSTLGSC-----IKLEQLKL 280 (741)
Q Consensus 215 ~~-----p~~~~~l~~L~~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L 280 (741)
.. +..+..+++|+. |++++|.++.. ++..+..+++|++|+|++|.++...+..+... ++|++|+|
T Consensus 242 ~~~~~l~~~~~~~~~~L~~-L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRT-LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCE-EECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred HHHHHHHHHHhcCCCCceE-EECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 32 223335788987 99999998854 56677889999999999999987666555543 68999999
Q ss_pred CCCccCCC----CChhcccCccCCeeeCCCCcCCCccchhhhc-----cccCCcccccCccccc----ccC-CccccCCc
Q 037916 281 GGNLFQGP----IPLSLSSLRGLRVLDLSQNNISGEIPKFLVE-----LQLVQNLNLSYNDLEG----VIP-TEGVFKNA 346 (741)
Q Consensus 281 ~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~----~~~-~~~~~~~~ 346 (741)
++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++ .++ .....+++
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 99999865 4566778899999999999998665555543 5789999999999985 333 33456888
Q ss_pred ccccccCCCC
Q 037916 347 SAISVFGNSK 356 (741)
Q Consensus 347 ~~~~~~~n~~ 356 (741)
+.+++.+|+.
T Consensus 401 ~~L~l~~N~i 410 (461)
T 1z7x_W 401 RELDLSNNCL 410 (461)
T ss_dssp CEEECCSSSC
T ss_pred cEEECCCCCC
Confidence 9999988853
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=8.4e-31 Score=289.66 Aligned_cols=247 Identities=19% Similarity=0.169 Sum_probs=143.5
Q ss_pred CcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcc
Q 037916 23 LLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNF 102 (741)
Q Consensus 23 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l 102 (741)
...++.+++.++ .+|..+. ++|++|+|++|+|+++.|..|.++++ |++|+|++|+|+++.+..|..+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~----------L~~L~Ls~n~i~~~~~~~~~~l 122 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHH----------LEVLQLGRNSIRQIEVGAFNGL 122 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTT----------CCEEECCSSCCCEECTTTTTTC
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCC----------CCEEECCCCccCCcChhhccCc
Confidence 345555555555 2343332 45555666666655555555555544 5666666666555555555555
Q ss_pred cccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc-CCCCCcCcccccCCccccee
Q 037916 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT-NKLSGNIPPSIGNLKKLLQL 181 (741)
Q Consensus 103 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 181 (741)
. +|++|+|++|+|....+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..+.+..|.++++|++|
T Consensus 123 ~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 A-SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp T-TCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred c-cCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 5 566666666665555555555666666666666666655555566666666666665 34444444455666666666
Q ss_pred eccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccc
Q 037916 182 YLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNML 261 (741)
Q Consensus 182 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 261 (741)
+|++|.+++. | .+..+++|++|+|++|+|++..|..|.++++|+. |+|++|++++..+..|..+++|+.|+|++|+|
T Consensus 202 ~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 278 (452)
T 3zyi_A 202 NLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK-LWVMNSQVSLIERNAFDGLASLVELNLAHNNL 278 (452)
T ss_dssp ECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCE-EECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCE-EEeCCCcCceECHHHhcCCCCCCEEECCCCcC
Confidence 6666666532 2 3555566666666666666555666666666665 66666666655556666666666666666666
Q ss_pred cchhhhhccccccccEEEeCCCccC
Q 037916 262 ECEILSTLGSCIKLEQLKLGGNLFQ 286 (741)
Q Consensus 262 ~~~~~~~~~~l~~L~~L~L~~N~l~ 286 (741)
+++.+..|..+++|+.|+|++|.+.
T Consensus 279 ~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 279 SSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp SCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CccChHHhccccCCCEEEccCCCcC
Confidence 6666666666666666666666554
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=3.5e-31 Score=274.02 Aligned_cols=252 Identities=21% Similarity=0.178 Sum_probs=161.7
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
+.++++++.++. +|..+ ..+|++|++++|++....+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~~-ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSS-CCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCccc-CCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 677888888774 34332 22677777777777776667777777777777777777777677777777777777777
Q ss_pred CC-CCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCC
Q 037916 162 NK-LSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240 (741)
Q Consensus 162 N~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~ 240 (741)
|+ ++.+.+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|..+++|+. |+|++|++++.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH-LFLHGNRISSV 168 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE-EECCSSCCCEE
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccE-EECCCCccccc
Confidence 76 66555666777777777777777777666666666777777777777766555555666666665 66666666655
Q ss_pred CChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhcc
Q 037916 241 LPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVEL 320 (741)
Q Consensus 241 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 320 (741)
.+..|..+++|++|+|++|.++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|.+....+.. .-+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 5555666666666666666666666666666666666666666666555555666666666666666665332211 122
Q ss_pred ccCCcccccCcccccccCC
Q 037916 321 QLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 321 ~~L~~L~l~~N~l~~~~~~ 339 (741)
..++.+..+.|.+.+..|.
T Consensus 248 ~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHHCCSEECCCBEEESG
T ss_pred HHHHhcccccCccccCCch
Confidence 3344445555555555444
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=287.38 Aligned_cols=247 Identities=19% Similarity=0.200 Sum_probs=143.7
Q ss_pred CcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcc
Q 037916 23 LLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNF 102 (741)
Q Consensus 23 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l 102 (741)
...++.+++.++ .+|..+. +++++|+|++|+|+++.+..|.++++ |++|+|++|+|+++.+..|.++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~----------L~~L~Ls~n~i~~i~~~~~~~l 111 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRH----------LEILQLSRNHIRTIEIGAFNGL 111 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSS----------CCEEECCSSCCCEECGGGGTTC
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCC----------CCEEECCCCcCCccChhhccCC
Confidence 345555555555 3343332 45555566666555555555555544 5566666665555555555555
Q ss_pred cccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc-CCCCCcCcccccCCccccee
Q 037916 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT-NKLSGNIPPSIGNLKKLLQL 181 (741)
Q Consensus 103 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 181 (741)
. +|++|+|++|+|..+.+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..+.+..|.++++|++|
T Consensus 112 ~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 A-NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp S-SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred c-cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 5 566666666665555555566666666666666666655555566666666666665 34443444455666666666
Q ss_pred eccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccc
Q 037916 182 YLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNML 261 (741)
Q Consensus 182 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 261 (741)
+|++|.++. +| .+..+++|++|+|++|+|++..|..|.++++|+. |+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 191 ~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 267 (440)
T 3zyj_A 191 NLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQK-LWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267 (440)
T ss_dssp ECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCE-EECTTCCCCEECTTSSTTCTTCCEEECTTSCC
T ss_pred cCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCE-EECCCCceeEEChhhhcCCCCCCEEECCCCCC
Confidence 666666652 23 2555566666666666666555666666666665 66666666655556666666666666666666
Q ss_pred cchhhhhccccccccEEEeCCCccC
Q 037916 262 ECEILSTLGSCIKLEQLKLGGNLFQ 286 (741)
Q Consensus 262 ~~~~~~~~~~l~~L~~L~L~~N~l~ 286 (741)
+.+.+..|..+++|+.|+|++|.+.
T Consensus 268 ~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 268 TLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CccChhHhccccCCCEEEcCCCCcc
Confidence 6666666666666666666666554
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.5e-31 Score=297.29 Aligned_cols=234 Identities=21% Similarity=0.234 Sum_probs=182.4
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
+|++|+|++|.|++..|..|..++ +|++|+|++|.+.+..| |..+++|++|+|++|.|+++.+. ++|++|+|
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEEC
Confidence 477888888888777777777777 78888888887766554 77888888888888888765432 67888888
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccc-ccccceeEEEcCCCccC
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLM-DLTSLSVGLDLSRNQLV 238 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~~L~Ls~N~l~ 238 (741)
++|.|++..+.. +++|+.|+|++|.+++..|..|..+++|++|+|++|+|++..|..+. .+++|+. |+|++|.|+
T Consensus 107 ~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~-L~Ls~N~l~ 182 (487)
T 3oja_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH-LNLQYNFIY 182 (487)
T ss_dssp CSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCE-EECTTSCCC
T ss_pred cCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccE-EecCCCccc
Confidence 888887665543 46788888888888877777888888888888888888877777776 6788887 888888887
Q ss_pred CCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCC-Cccchhh
Q 037916 239 GSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNIS-GEIPKFL 317 (741)
Q Consensus 239 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~ 317 (741)
+..+ +..+++|+.|+|++|.|+++++. |..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|.+. +.+|..+
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 5532 33588888888888888876555 8888889999999998885 6667888889999999999887 5677788
Q ss_pred hccccCCccccc
Q 037916 318 VELQLVQNLNLS 329 (741)
Q Consensus 318 ~~l~~L~~L~l~ 329 (741)
..++.|+.++++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 888888888876
No 308
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.5e-33 Score=313.00 Aligned_cols=342 Identities=18% Similarity=0.151 Sum_probs=269.4
Q ss_pred CCCCCcccc----cCChhhhhCCCCCcEEEcccCcccccCCccCC-CCC----CCcEEEeecCcCcc----cCCchhhhh
Q 037916 2 DVGVNRVQG----GIPLDFGFTLPNLLFLSLGFNQITGVIPSSMF-NAS----KLEVFQVTSNNLTG----EVPSEFGKA 68 (741)
Q Consensus 2 dl~~n~~~~----~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~----~L~~L~L~~N~l~~----~~~~~~~~l 68 (741)
||++|++.. .+|..+. .+++|++|+|++|+|++..+..+. .++ +|++|+|++|+|+. .++..|..+
T Consensus 34 ~L~~~~l~~~~~~~l~~~l~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 112 (461)
T 1z7x_W 34 RLDDCGLTEARCKDISSALR-VNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTL 112 (461)
T ss_dssp EEESSCCCHHHHHHHHHHHH-TCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSC
T ss_pred EccCCCCCHHHHHHHHHHHH-hCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccC
Confidence 567888774 4565565 789999999999999875444433 354 79999999999994 446667776
Q ss_pred hhhhhccccCCCccEEECcCCcCcccCCchhhc-----ccccccEEEccCCcccccC----CccccCCCCccEEEccccc
Q 037916 69 TKAYCVQNCNQHLKHLDINNNNFGGLLPGCICN-----FSITLETLIFNSNKIFRSI----PAGIGKFINLQTLHMWDNQ 139 (741)
Q Consensus 69 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~-----l~~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~ 139 (741)
++ |++|+|++|.+++..+..+.. .. +|++|+|++|++.... +..+..+++|++|+|++|.
T Consensus 113 ~~----------L~~L~Ls~n~i~~~~~~~l~~~l~~~~~-~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 181 (461)
T 1z7x_W 113 PT----------LQELHLSDNLLGDAGLQLLCEGLLDPQC-RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181 (461)
T ss_dssp TT----------CCEEECCSSBCHHHHHHHHHHHHTSTTC-CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB
T ss_pred Cc----------eeEEECCCCcCchHHHHHHHHHHhcCCC-cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCC
Confidence 65 999999999998665554443 23 7999999999997644 5667778999999999999
Q ss_pred ccccCCcccc-----CCCcCcEEEcccCCCCCc----CcccccCCcccceeeccCccccccc-----CcccccCCCCCEE
Q 037916 140 LSGTISPAIG-----ELQNLVTLAINTNKLSGN----IPPSIGNLKKLLQLYLIENFLQVSI-----PSSLGQCQSLTTI 205 (741)
Q Consensus 140 i~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L 205 (741)
++...+..+. .+++|++|+|++|+++.. ++..+..+++|++|+|++|.++... +..+..+++|++|
T Consensus 182 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L 261 (461)
T 1z7x_W 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 261 (461)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred cchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEE
Confidence 9866555543 367999999999999864 4777888999999999999988643 3334468999999
Q ss_pred eccCcccccc----CCccccccccceeEEEcCCCccCCCCChhhcC-----CCCCcEEEeccccccch----hhhhcccc
Q 037916 206 NLSYNNLSGT----IPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGK-----LINLEILFISRNMLECE----ILSTLGSC 272 (741)
Q Consensus 206 ~L~~N~l~~~----~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l 272 (741)
+|++|++++. ++..+..+++|+. |+|++|.+.+..+..+.. .++|++|+|++|.++.. .+..+..+
T Consensus 262 ~L~~n~l~~~~~~~l~~~l~~~~~L~~-L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 340 (461)
T 1z7x_W 262 WIWECGITAKGCGDLCRVLRAKESLKE-LSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN 340 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCTTCCE-EECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred ECcCCCCCHHHHHHHHHHHhhCCCcce-EECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhC
Confidence 9999999854 6777888999998 999999997554444443 37999999999999976 46667788
Q ss_pred ccccEEEeCCCccCCCCChhccc-----CccCCeeeCCCCcCCC----ccchhhhccccCCcccccCcccccccCCc---
Q 037916 273 IKLEQLKLGGNLFQGPIPLSLSS-----LRGLRVLDLSQNNISG----EIPKFLVELQLVQNLNLSYNDLEGVIPTE--- 340 (741)
Q Consensus 273 ~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--- 340 (741)
++|++|+|++|++++..+..+.. .++|+.|+|++|.+++ .+|..+..+++|+.|++++|++++.....
T Consensus 341 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~ 420 (461)
T 1z7x_W 341 RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVE 420 (461)
T ss_dssp SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHH
T ss_pred CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHH
Confidence 99999999999998766655543 6799999999999986 67888999999999999999998652111
Q ss_pred ---cccCCcccccccCCCC
Q 037916 341 ---GVFKNASAISVFGNSK 356 (741)
Q Consensus 341 ---~~~~~~~~~~~~~n~~ 356 (741)
.....++.+.+.++.+
T Consensus 421 ~l~~~~~~L~~L~~~~~~~ 439 (461)
T 1z7x_W 421 SVRQPGCLLEQLVLYDIYW 439 (461)
T ss_dssp HHTSTTCCCCEEECTTCCC
T ss_pred HhccCCcchhheeeccccc
Confidence 1123566677766654
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.8e-30 Score=268.59 Aligned_cols=254 Identities=22% Similarity=0.184 Sum_probs=197.7
Q ss_pred ccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccC
Q 037916 106 LETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIE 185 (741)
Q Consensus 106 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 185 (741)
-++++++++.+.. +|..+ .++|++|+|++|+|+++.+..|..+++|++|+|++|+++++.+..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 3677788887744 44444 35788888888888877777888888888888888888877778888888888888888
Q ss_pred cc-cccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccch
Q 037916 186 NF-LQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECE 264 (741)
Q Consensus 186 N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 264 (741)
|. ++...|..|..+++|++|+|++|++++..|..|.++++|+. |++++|++++..+..|+.+++|++|+|++|+++++
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY-LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE-EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCE-EECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 86 77666778888888888888888888777777888888887 88888888876667788888888888888888877
Q ss_pred hhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCccccC
Q 037916 265 ILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFK 344 (741)
Q Consensus 265 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 344 (741)
.+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.+..+..+.+.
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 77778888888888888888887778888888888888888888887777778888888888888888887666544444
Q ss_pred CcccccccCCCCccccCCC
Q 037916 345 NASAISVFGNSKLCGGIPE 363 (741)
Q Consensus 345 ~~~~~~~~~n~~~c~~~~~ 363 (741)
.+..+....+...|..++.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHCCSEECCCBEEESGG
T ss_pred HHHhcccccCccccCCchH
Confidence 5555666667777766544
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.1e-29 Score=267.92 Aligned_cols=227 Identities=25% Similarity=0.354 Sum_probs=166.7
Q ss_pred CCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCch
Q 037916 19 TLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGC 98 (741)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 98 (741)
..++++.|+|++|+|+ .+|..++++++|++|+|++|+|+ .+|..|..+++ |++|+|++|+++ .+|..
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~----------L~~L~Ls~n~l~-~lp~~ 145 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAG----------LETLTLARNPLR-ALPAS 145 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTT----------CSEEEEESCCCC-CCCGG
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCC----------CCEEECCCCccc-cCcHH
Confidence 3478999999999998 66777888999999999999998 78888888876 999999999988 66778
Q ss_pred hhcccccccEEEccCCcccccCCccccC---------CCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCc
Q 037916 99 ICNFSITLETLIFNSNKIFRSIPAGIGK---------FINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIP 169 (741)
Q Consensus 99 ~~~l~~~L~~L~L~~n~i~~~~~~~~~~---------l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 169 (741)
+..+. +|++|+|++|++.+..|..+.. +++|++|+|++|+|+ .+|..|.++++|++|+|++|++++ +|
T Consensus 146 l~~l~-~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~ 222 (328)
T 4fcg_A 146 IASLN-RLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LG 222 (328)
T ss_dssp GGGCT-TCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CC
T ss_pred HhcCc-CCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cc
Confidence 88887 8888888888887888776654 667777777777766 445566666777777777777764 44
Q ss_pred ccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCC
Q 037916 170 PSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLI 249 (741)
Q Consensus 170 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~ 249 (741)
..|..+++|++|+|++|.+.+.+|..|..+++|++|+|++|++.+.+|..+.++++|+. |+|++|++.+.+|..++.++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~-L~L~~n~~~~~iP~~l~~L~ 301 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEK-LDLRGCVNLSRLPSLIAQLP 301 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCE-EECTTCTTCCCCCGGGGGSC
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCE-EeCCCCCchhhccHHHhhcc
Confidence 45666666666666666666666666666666666666666666666666666666665 66666666666666666666
Q ss_pred CCcEEEecccccc
Q 037916 250 NLEILFISRNMLE 262 (741)
Q Consensus 250 ~L~~L~Ls~N~l~ 262 (741)
+|+.+++..|.+.
T Consensus 302 ~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 302 ANCIILVPPHLQA 314 (328)
T ss_dssp TTCEEECCGGGSC
T ss_pred CceEEeCCHHHHH
Confidence 6666666655544
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=2.1e-31 Score=280.02 Aligned_cols=243 Identities=21% Similarity=0.229 Sum_probs=179.2
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcc
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAIN 160 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 160 (741)
|++|+|++|+|++..|..|..+. +|++|+|++|++.+..+ |..+++|++|+|++|+|+++. ..++|++|+++
T Consensus 36 L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~ 107 (317)
T 3o53_A 36 VKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (317)
T ss_dssp CSEEECTTSCCCCCCHHHHTTCT-TCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CCEEECcCCccCcCCHHHhhCCC-cCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECC
Confidence 66666666666666556666666 66677776666655443 667777777777777776543 22677777777
Q ss_pred cCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccc-ccccceeEEEcCCCccCC
Q 037916 161 TNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLM-DLTSLSVGLDLSRNQLVG 239 (741)
Q Consensus 161 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~~L~Ls~N~l~~ 239 (741)
+|++++..+.. +++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+. .+++|+. |+|++|.|++
T Consensus 108 ~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~-L~L~~N~l~~ 183 (317)
T 3o53_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH-LNLQYNFIYD 183 (317)
T ss_dssp SSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCE-EECTTSCCCE
T ss_pred CCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCE-EECCCCcCcc
Confidence 77777554433 45677777777777776676777777777777777777766666554 5677776 8888887774
Q ss_pred CCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCC-Cccchhhh
Q 037916 240 SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNIS-GEIPKFLV 318 (741)
Q Consensus 240 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~ 318 (741)
. + ....+++|++|+|++|+|+++.+. |..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ +.+|..+.
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-c-cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 4 2 233478899999999999876554 8889999999999999994 6778899999999999999998 77888999
Q ss_pred ccccCCcccccC-cccccccCC
Q 037916 319 ELQLVQNLNLSY-NDLEGVIPT 339 (741)
Q Consensus 319 ~l~~L~~L~l~~-N~l~~~~~~ 339 (741)
.+++|+.|++++ +.+++..+.
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccccceEEECCCchhccCCchh
Confidence 999999999994 456665543
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=1.3e-31 Score=281.49 Aligned_cols=253 Identities=20% Similarity=0.198 Sum_probs=151.5
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|++.+.+. .++..++..+++|++|+|++|+|+++.|..|.++++|++|+|++|++++..+ |..+++ |
T Consensus 16 ~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~----------L 82 (317)
T 3o53_A 16 KVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLST----------L 82 (317)
T ss_dssp SCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTT----------C
T ss_pred eccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCC----------C
Confidence 56666665 3444555466677777777777777666777777777777777777775543 556554 7
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+|++..+. + +|++|++++|++.+..+.. +++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 83 ~~L~Ls~n~l~~l~~~-----~-~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 83 RTLDLNNNYVQELLVG-----P-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp CEEECCSSEEEEEEEC-----T-TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred CEEECcCCccccccCC-----C-CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 7777777777644321 2 6666666666665544433 34566666666666666566666666666666666
Q ss_pred CCCCCcCccccc-CCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCC
Q 037916 162 NKLSGNIPPSIG-NLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240 (741)
Q Consensus 162 N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~ 240 (741)
|++++..+..+. .+++|++|+|++|.|++..+ ...+++|++|+|++|+|+ .+|..+..+++|+. |+|++|+|+ .
T Consensus 154 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~-L~L~~N~l~-~ 228 (317)
T 3o53_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTW-ISLRNNKLV-L 228 (317)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSE-EECTTSCCC-E
T ss_pred CCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCC-cchhhhcccCcccE-EECcCCccc-c
Confidence 666655555543 45666666666666654422 223556666666666665 33334555555555 666666655 3
Q ss_pred CChhhcCCCCCcEEEecccccc-chhhhhccccccccEEEeC
Q 037916 241 LPTEVGKLINLEILFISRNMLE-CEILSTLGSCIKLEQLKLG 281 (741)
Q Consensus 241 ~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~ 281 (741)
+|..+..+++|+.|+|++|.+. +..+..+..+++|+.|+++
T Consensus 229 l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 4445555555555555555555 4444555555555555555
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.8e-29 Score=266.07 Aligned_cols=235 Identities=18% Similarity=0.265 Sum_probs=147.6
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
+++.|+|++|+|+ .+|..+..+. +|++|+|++|.+. .+|..|..+++|++|+|++|+|+ .+|..|.++++|++|+|
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 3555555555554 3333344444 4555555555543 44444455555555555555554 33444555555555555
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCC
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVG 239 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~ 239 (741)
++|++.+.+|..+... ..+..|.++++|++|+|++|+|+ .+|..+.++++|+. |+|++|++++
T Consensus 158 ~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~-L~L~~N~l~~ 220 (328)
T 4fcg_A 158 RACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKS-LKIRNSPLSA 220 (328)
T ss_dssp EEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCE-EEEESSCCCC
T ss_pred CCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCE-EEccCCCCCc
Confidence 5544444444433320 01122344777777777777777 67777777777776 7777777774
Q ss_pred CCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhc
Q 037916 240 SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVE 319 (741)
Q Consensus 240 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 319 (741)
+|..++.+++|++|+|++|.+.+..+..|+.+++|+.|+|++|.+.+.+|..+.++++|+.|+|++|++.+.+|..+..
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 4456777777777777777777777777777777888888887777777777888888888888888877778888888
Q ss_pred cccCCcccccCcccccc
Q 037916 320 LQLVQNLNLSYNDLEGV 336 (741)
Q Consensus 320 l~~L~~L~l~~N~l~~~ 336 (741)
+++|+.+++..|.+...
T Consensus 300 L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 300 LPANCIILVPPHLQAQL 316 (328)
T ss_dssp SCTTCEEECCGGGSCC-
T ss_pred ccCceEEeCCHHHHHHH
Confidence 88888887777766543
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.5e-29 Score=281.63 Aligned_cols=263 Identities=24% Similarity=0.307 Sum_probs=190.4
Q ss_pred CCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhh
Q 037916 21 PNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCIC 100 (741)
Q Consensus 21 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 100 (741)
.++++|++++|.|+ .+|..+. ++|++|+|++|+|+ .+|. .++ +|++|+|++|+|+++.+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~----------~L~~L~Ls~N~l~~lp~---- 98 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP----------ELRTLEVSGNQLTSLPV---- 98 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT----------TCCEEEECSCCCSCCCC----
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC----------CCCEEEcCCCcCCcCCC----
Confidence 45788888888887 5566554 78888888888888 4444 233 38888888888875433
Q ss_pred cccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccce
Q 037916 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQ 180 (741)
Q Consensus 101 ~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 180 (741)
.+. +|++|+|++|+|.+..+ .+++|++|+|++|+|+++.. .+++|++|+|++|+|+++ |. .+.+|+.
T Consensus 99 ~l~-~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~ 165 (622)
T 3g06_A 99 LPP-GLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASL-PA---LPSELCK 165 (622)
T ss_dssp CCT-TCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC-CC---CCTTCCE
T ss_pred CCC-CCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCc-CC---ccCCCCE
Confidence 344 78888888888865433 45678888888888886443 247788888888888753 33 3467888
Q ss_pred eeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecccc
Q 037916 181 LYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNM 260 (741)
Q Consensus 181 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 260 (741)
|++++|.|++ +| ..+++|+.|+|++|+|+ .+|.. +++|+. |++++|.|+. +|. .+++|+.|+|++|+
T Consensus 166 L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~-~l~~~---~~~L~~-L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~ 232 (622)
T 3g06_A 166 LWAYNNQLTS-LP---MLPSGLQELSVSDNQLA-SLPTL---PSELYK-LWAYNNRLTS-LPA---LPSGLKELIVSGNR 232 (622)
T ss_dssp EECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCCC---CTTCCE-EECCSSCCSS-CCC---CCTTCCEEECCSSC
T ss_pred EECCCCCCCC-Cc---ccCCCCcEEECCCCCCC-CCCCc---cchhhE-EECcCCcccc-cCC---CCCCCCEEEccCCc
Confidence 8888888875 44 34578888888888887 45543 356666 8888888874 443 24778888888888
Q ss_pred ccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 261 LECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 261 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
|+++. ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++.+|.
T Consensus 233 L~~lp----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 233 LTSLP----VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CSCCC----CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred cCcCC----CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 88644 456778888888888885 443 5678888888888888 5677788888888888888888877654
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.2e-28 Score=279.30 Aligned_cols=264 Identities=26% Similarity=0.268 Sum_probs=222.3
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHL 81 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L 81 (741)
|+++|.+. .||..++ ++|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .++ +|
T Consensus 46 ~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~----------~L 103 (622)
T 3g06_A 46 NVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPP----------GL 103 (622)
T ss_dssp ECCSSCCS-CCCSCCC---TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCT----------TC
T ss_pred EecCCCcC-ccChhhC---CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCC----------CC
Confidence 68999998 9998887 899999999999995 454 57999999999999994 554 344 49
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
++|+|++|+|+++.+ .+. +|+.|++++|+|.. +|.. +++|++|+|++|+|+++. . .+++|+.|++++
T Consensus 104 ~~L~Ls~N~l~~l~~----~l~-~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L~~ 170 (622)
T 3g06_A 104 LELSIFSNPLTHLPA----LPS-GLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLP-A---LPSELCKLWAYN 170 (622)
T ss_dssp CEEEECSCCCCCCCC----CCT-TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCC-C---CCTTCCEEECCS
T ss_pred CEEECcCCcCCCCCC----CCC-CcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcC-C---ccCCCCEEECCC
Confidence 999999999996544 344 89999999999976 4443 489999999999999654 3 357899999999
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
|+|++ +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|+|+ .+|.. +++|+. |+|++|+|++ +
T Consensus 171 N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~-L~Ls~N~L~~-l 236 (622)
T 3g06_A 171 NQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKE-LIVSGNRLTS-L 236 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCE-EECCSSCCSC-C
T ss_pred CCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCE-EEccCCccCc-C
Confidence 99996 44 457899999999999985 4433 479999999999998 66654 467887 9999999996 5
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ 321 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 321 (741)
| ..+++|+.|+|++|+|+.++. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++..|..+..++
T Consensus 237 p---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 237 P---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred C---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 5 567899999999999997554 6789999999999999 6688899999999999999999998888887776
Q ss_pred c
Q 037916 322 L 322 (741)
Q Consensus 322 ~ 322 (741)
.
T Consensus 309 ~ 309 (622)
T 3g06_A 309 S 309 (622)
T ss_dssp H
T ss_pred c
Confidence 3
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.7e-31 Score=277.42 Aligned_cols=202 Identities=23% Similarity=0.239 Sum_probs=102.9
Q ss_pred CCCccEEEcccccccccCCccc--cCCCcCcEEEcccCCCCCcCcccccCC-----cccceeeccCcccccccCcccccC
Q 037916 127 FINLQTLHMWDNQLSGTISPAI--GELQNLVTLAINTNKLSGNIPPSIGNL-----KKLLQLYLIENFLQVSIPSSLGQC 199 (741)
Q Consensus 127 l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l 199 (741)
+++|++|+|++|+|++..|..+ ..+++|++|+|++|++++. |..|..+ ++|++|+|++|++++..|..|..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4444444444444444333332 4444444444444444433 3444433 444444444444444444444444
Q ss_pred CCCCEEeccCcccccc--CCccc--cccccceeEEEcCCCccCCC---CChhhcCCCCCcEEEeccccccchhh-hhccc
Q 037916 200 QSLTTINLSYNNLSGT--IPPQL--MDLTSLSVGLDLSRNQLVGS---LPTEVGKLINLEILFISRNMLECEIL-STLGS 271 (741)
Q Consensus 200 ~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~ 271 (741)
++|++|+|++|++.+. .|..+ ..+++|+. |+|++|+|++. ....+..+++|++|+|++|++++..+ ..+..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQV-LALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCE-EECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCE-EECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 4555555555544332 11122 44455554 55555555421 11233455666666666666665442 34455
Q ss_pred cccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccc
Q 037916 272 CIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEG 335 (741)
Q Consensus 272 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 335 (741)
+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 566666666666666 3444444 5666666666666654 44 6666666777777776654
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.1e-30 Score=271.61 Aligned_cols=248 Identities=18% Similarity=0.171 Sum_probs=190.5
Q ss_pred hCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCc-ccCCchhh-------hhhhhhhccccCCCccEEECcCC
Q 037916 18 FTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLT-GEVPSEFG-------KATKAYCVQNCNQHLKHLDINNN 89 (741)
Q Consensus 18 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~~~~~~~~~~~L~~L~Ls~N 89 (741)
..+++|++|++++|.+ .+|..+... |++|+|++|+++ ...|..+. +++ +|++|+|++|
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~----------~L~~L~L~~n 105 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS----------GLQELTLENL 105 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS----------CCCEEEEEEE
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC----------CccEEEccCC
Confidence 3567788888888888 566655544 888888888884 34555443 344 3888888888
Q ss_pred cCcccCCchh--hcccccccEEEccCCcccccCCccccCC-----CCccEEEcccccccccCCccccCCCcCcEEEcccC
Q 037916 90 NFGGLLPGCI--CNFSITLETLIFNSNKIFRSIPAGIGKF-----INLQTLHMWDNQLSGTISPAIGELQNLVTLAINTN 162 (741)
Q Consensus 90 ~l~~~~~~~~--~~l~~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 162 (741)
++++..|..+ ..++ +|++|+|++|++.+. |..+..+ ++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 106 ~l~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 183 (312)
T 1wwl_A 106 EVTGTAPPPLLEATGP-DLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDN 183 (312)
T ss_dssp BCBSCCCCCSSSCCSC-CCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSC
T ss_pred cccchhHHHHHHhcCC-CccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCC
Confidence 8887777765 6666 888888888888776 7777766 78888888888888888888888888888888888
Q ss_pred CCCCc--Ccccc--cCCcccceeeccCccccc---ccCcccccCCCCCEEeccCccccccCC-ccccccccceeEEEcCC
Q 037916 163 KLSGN--IPPSI--GNLKKLLQLYLIENFLQV---SIPSSLGQCQSLTTINLSYNNLSGTIP-PQLMDLTSLSVGLDLSR 234 (741)
Q Consensus 163 ~l~~~--~~~~~--~~l~~L~~L~L~~N~i~~---~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~~L~Ls~ 234 (741)
++.+. .+..+ ..+++|++|+|++|+|++ .....+..+++|++|+|++|+|++..| ..+..+++|+. |+|++
T Consensus 184 ~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~-L~Ls~ 262 (312)
T 1wwl_A 184 PELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNS-LNLSF 262 (312)
T ss_dssp TTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCE-EECTT
T ss_pred CcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCE-EECCC
Confidence 87654 23333 788888888888888873 223445677889999999999887665 45666788887 99999
Q ss_pred CccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCC
Q 037916 235 NQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQG 287 (741)
Q Consensus 235 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 287 (741)
|+|+ .+|..+. ++|++|+|++|+|+++ |. +..+++|++|+|++|++++
T Consensus 263 N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 263 TGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 9988 5666655 7899999999999877 44 8888999999999998875
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.2e-29 Score=282.07 Aligned_cols=234 Identities=21% Similarity=0.211 Sum_probs=150.6
Q ss_pred CCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhh
Q 037916 21 PNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCIC 100 (741)
Q Consensus 21 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 100 (741)
++|++|+|++|.|+++.|..|.++++|++|+|++|.|++..| |..+++ |++|+|++|.|+++.+.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~----------L~~L~Ls~N~l~~l~~~--- 98 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLST----------LRTLDLNNNYVQELLVG--- 98 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTT----------CCEEECCSSEEEEEEEC---
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCC----------CCEEEecCCcCCCCCCC---
Confidence 378888888888888777888888888888888888886654 666665 88888888888755432
Q ss_pred cccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCccccc-CCcccc
Q 037916 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIG-NLKKLL 179 (741)
Q Consensus 101 ~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~ 179 (741)
+ +|++|++++|.|.+..+.. +++|++|+|++|.|+++.+..|.++++|++|+|++|+|++..|..|. .+++|+
T Consensus 99 --~-~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~ 172 (487)
T 3oja_A 99 --P-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE 172 (487)
T ss_dssp --T-TCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCC
T ss_pred --C-CcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCccc
Confidence 3 6777777777776554432 35667777777777666666666666777777777777666666654 566666
Q ss_pred eeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRN 259 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 259 (741)
+|+|++|.|++..+ +..+++|++|+|++|+|++ +|..|..+++|+. |+|++|.|++ +|..+..+++|+.|++++|
T Consensus 173 ~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~-L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 173 HLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW-ISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp EEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE-EECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred EEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccE-EEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 66666666665422 2235666666666666663 3333556666665 6666666653 4444555556666666665
Q ss_pred ccc-chhhhhccccccccEEEe
Q 037916 260 MLE-CEILSTLGSCIKLEQLKL 280 (741)
Q Consensus 260 ~l~-~~~~~~~~~l~~L~~L~L 280 (741)
.+. +..+..+..+++|+.|++
T Consensus 248 ~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 248 GFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp CBCHHHHHHHHTTCHHHHHHHH
T ss_pred CCcCcchHHHHHhCCCCcEEec
Confidence 555 334444444444444444
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=9e-28 Score=247.12 Aligned_cols=209 Identities=21% Similarity=0.177 Sum_probs=117.4
Q ss_pred CccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEecc
Q 037916 129 NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS 208 (741)
Q Consensus 129 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 208 (741)
+|++|+|++|+|+++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444444444444445555555554444444444445555555555555544444455555555555555
Q ss_pred CccccccCCccccccccceeEEEcCCCccCCC-CChhhcCCCCCcEEEeccccccchhhhhcccccccc----EEEeCCC
Q 037916 209 YNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS-LPTEVGKLINLEILFISRNMLECEILSTLGSCIKLE----QLKLGGN 283 (741)
Q Consensus 209 ~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~L~~N 283 (741)
+|++++..+..+.++++|+. |++++|.+++. +|..|..+++|++|+|++|+++++.+..|..+++|+ .|++++|
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKE-LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCE-EECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCccccCchhcccCCCCCE-EECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 55555444444555555554 55555555542 355666666666666666666665555565555555 6666777
Q ss_pred ccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 284 LFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 284 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
++++..+..+... +|+.|+|++|++++..+..|..+++|+.|+|++|++++..+.
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 188 PMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred cccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 6665555444433 677777777777766556666677777777777777766553
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=7.8e-30 Score=287.42 Aligned_cols=187 Identities=16% Similarity=-0.003 Sum_probs=129.3
Q ss_pred hcccCceeeEEEEEEcCCCeEEEEEEeeccCc----------CcchhHHHHHHHHHhc-CCCceeeEeeeecCccccCCc
Q 037916 407 WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH----------GASKSSIAECSALRNI-RHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 407 ~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..+.|++|.+..++....|+.||+|++..... ...+++.+|+++|+++ .|+||++++++ ++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence 35567777777777666788999999974311 1235688999999999 79999999999 67778
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..||||||++|++|.+++... ..++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+|
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~----------~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vK 379 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAG----------EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHAR 379 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTT----------CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhC----------CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEE
Confidence 999999999999999999744 334443 5899999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCCC
Q 037916 556 VADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p~ 618 (741)
|+|||+|+........ ....+||+.|+|||.+ . +.+..++|+||+|++++++.++..++
T Consensus 380 L~DFGlAr~~~~~~~~--~~t~vGTp~YmAPE~l-~-g~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 380 LIDFGSIVTTPQDCSW--PTNLVQSFFVFVNELF-A-ENKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ECCCTTEESCC---CC--SHHHHHHHHHHHHHHC-------------------CCCCTTHHHH
T ss_pred EeecccCeeCCCCCcc--ccCceechhhccHHHh-C-CCCCCcccccccccchhhhccccchh
Confidence 9999999876544322 2235699999999654 3 35677899999999999887766553
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.5e-27 Score=245.49 Aligned_cols=226 Identities=20% Similarity=0.199 Sum_probs=183.0
Q ss_pred cEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEccc
Q 037916 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINT 161 (741)
Q Consensus 82 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 161 (741)
...+.++.++. .+|..+. .+|++|++++|++.+..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 10 ~~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ceEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 45666777776 3444332 2688888888888777777888888888888888888877777888888888888888
Q ss_pred CCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCcccccc-CCccccccccceeEEEcCCCccCCC
Q 037916 162 NKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGT-IPPQLMDLTSLSVGLDLSRNQLVGS 240 (741)
Q Consensus 162 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~~L~Ls~N~l~~~ 240 (741)
|++++..+..|.++++|++|++++|.+++..+..|..+++|++|+|++|++++. +|..|.++++|+. |+|++|++++.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~-L~Ls~N~l~~~ 164 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH-LDLSSNKIQSI 164 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE-EECCSSCCCEE
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCE-EECCCCCCCcC
Confidence 888877777888888888888888888877776788888888888888888753 5788888888887 88888888877
Q ss_pred CChhhcCCCCCc----EEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCcc
Q 037916 241 LPTEVGKLINLE----ILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEI 313 (741)
Q Consensus 241 ~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (741)
.+..|..+++|+ .|++++|.++++.+..+... +|+.|+|++|++++..+..|..+++|+.|+|++|.+++.-
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 777777777777 89999999998777777654 7999999999999888888899999999999999998644
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.5e-26 Score=237.08 Aligned_cols=207 Identities=26% Similarity=0.274 Sum_probs=123.8
Q ss_pred ccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCc
Q 037916 76 NCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLV 155 (741)
Q Consensus 76 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 155 (741)
.|..+++.+++++|+++. +|..+. .+|+.|+|++|++....+..|.++++|++|+|++|+|+.+.+..|.++++|+
T Consensus 13 ~c~~~~~~l~~~~~~l~~-ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~ 88 (270)
T 2o6q_A 13 SCNNNKNSVDCSSKKLTA-IPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88 (270)
T ss_dssp EEETTTTEEECTTSCCSS-CCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCC
T ss_pred EeCCCCCEEEccCCCCCc-cCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCC
Confidence 444567778888877774 343322 2566666666666655555666666666666666666655555556666666
Q ss_pred EEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCC
Q 037916 156 TLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRN 235 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N 235 (741)
+|+|++|+++++.+..|.++++|++|+|++|.+++..+..|..+++|++ |+|++|
T Consensus 89 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-------------------------L~Ls~n 143 (270)
T 2o6q_A 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY-------------------------LSLGYN 143 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE-------------------------EECCSS
T ss_pred EEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE-------------------------EECCCC
Confidence 6666666665554445555555555555555555444444444444444 555555
Q ss_pred ccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCC
Q 037916 236 QLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 236 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
.|++..+..|..+++|+.|+|++|+++.+.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 5544444445555566666666666665555556666666666666666666666667777777777777777654
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.3e-26 Score=235.63 Aligned_cols=207 Identities=23% Similarity=0.237 Sum_probs=163.1
Q ss_pred CccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEecc
Q 037916 129 NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS 208 (741)
Q Consensus 129 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 208 (741)
+++++++++|.++.+ |..+. ++|++|+|++|+|+++.+.+|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~i-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAI-PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCcc-CCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 345566666665533 22222 356666666666665555566666666666666666665555566677777777777
Q ss_pred CccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCC
Q 037916 209 YNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGP 288 (741)
Q Consensus 209 ~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 288 (741)
+|++++..+..|.++++|+. |+|++|++++..+..|..+++|++|+|++|.|+.+.+..|..+++|+.|+|++|++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAE-LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCE-EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCE-EECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 77777655666777888887 88888888877888899999999999999999999888899999999999999999998
Q ss_pred CChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCC
Q 037916 289 IPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 289 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+....
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 888899999999999999999988888899999999999999999877653
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=2.5e-26 Score=237.47 Aligned_cols=198 Identities=23% Similarity=0.184 Sum_probs=95.3
Q ss_pred cccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeecc
Q 037916 105 TLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLI 184 (741)
Q Consensus 105 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 184 (741)
+++++++++|++.. +|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+ ...+++|++|+|+
T Consensus 11 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls 85 (290)
T 1p9a_G 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLS 85 (290)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECC
T ss_pred CccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECC
Confidence 55555555555533 233332 355555555555555555555555555555555555553322 1444555555555
Q ss_pred CcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccch
Q 037916 185 ENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECE 264 (741)
Q Consensus 185 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 264 (741)
+|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+. |+|++|+|++..+..|..+++|+.|+|++|+|+.+
T Consensus 86 ~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQE-LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCE-EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCE-EECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 55554 33444444455555555555554333344444444444 44444444444444444444444444444444444
Q ss_pred hhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCC
Q 037916 265 ILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNIS 310 (741)
Q Consensus 265 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 310 (741)
.+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 164 ~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 164 PAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 4444444444444444444444 23333333344444444444443
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=4.3e-26 Score=235.77 Aligned_cols=207 Identities=24% Similarity=0.186 Sum_probs=180.4
Q ss_pred cccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCC
Q 037916 123 GIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSL 202 (741)
Q Consensus 123 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 202 (741)
.+.++++|+++++++|.|+.+++..+ ++|+.|+|++|+|+++.+..|.++++|++|+|++|.|++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 36778899999999999996654433 6899999999999988888999999999999999999866543 788999
Q ss_pred CEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCC
Q 037916 203 TTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGG 282 (741)
Q Consensus 203 ~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 282 (741)
++|+|++|+|+ .+|..+..+++|+. |+|++|+|++..+..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~-L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTV-LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCE-EECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCE-EECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 99999999998 78888899999997 99999999988888899999999999999999988888899999999999999
Q ss_pred CccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccccc
Q 037916 283 NLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVI 337 (741)
Q Consensus 283 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 337 (741)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.+..
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9999887788889999999999999998 56666777788899999999887654
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3.5e-26 Score=234.49 Aligned_cols=204 Identities=23% Similarity=0.214 Sum_probs=139.7
Q ss_pred cCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCE
Q 037916 125 GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTT 204 (741)
Q Consensus 125 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 204 (741)
..+++|+.|++++|.++.+ ..+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 3444555555555555532 2355555666666666665542 25556666666666666666555555666666666
Q ss_pred EeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCc
Q 037916 205 INLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNL 284 (741)
Q Consensus 205 L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 284 (741)
|+|++|++++..+..|.++++|+. |+|++|++++..+..|+.+++|++|+|++|+++++.+..|..+++|+.|++++|+
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTY-LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCE-EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCccCHHHhccCCCCCE-EECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 666666666555555666667765 7777777776666667777777777777777777777777778888888888888
Q ss_pred cCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc
Q 037916 285 FQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 285 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
+++..+..|..+++|+.|+|++|.+.+. ++.|+.|++..|.++|.+|..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 8877777788888888888888887753 446888888889998887765
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6e-26 Score=232.80 Aligned_cols=229 Identities=19% Similarity=0.192 Sum_probs=176.6
Q ss_pred CCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhh
Q 037916 21 PNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCIC 100 (741)
Q Consensus 21 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 100 (741)
.++..++++++.+.+.. .+..+++|+.|++++|.++. ++ .+..+++ |++|+|++|++++. ..+.
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~----------L~~L~l~~n~l~~~--~~l~ 82 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPN----------VRYLALGGNKLHDI--SALK 82 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-CT-TGGGCTT----------CCEEECTTSCCCCC--GGGT
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-cc-ccccCCC----------CcEEECCCCCCCCc--hhhc
Confidence 55666777777776543 35567788888888888773 22 4666654 88888888888753 3566
Q ss_pred cccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccce
Q 037916 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQ 180 (741)
Q Consensus 101 ~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 180 (741)
.++ +|++|+|++|++.+..+..|..+++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|..+++|++
T Consensus 83 ~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELT-NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCC-CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 776 7888888888887777777888888888888888888777777888888888888888888777777888888888
Q ss_pred eeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecccc
Q 037916 181 LYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNM 260 (741)
Q Consensus 181 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 260 (741)
|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+. |+|++|.+.+. +++|+.|+++.|.
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~~~-------~~~l~~l~~~~n~ 233 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY-IWLHDNPWDCT-------CPGIRYLSEWINK 233 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCCC-------TTTTHHHHHHHHH
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCE-EEccCCCcccc-------CcHHHHHHHHHHh
Confidence 888888888777777788888888888888888777777788888887 88888887643 4478888888888
Q ss_pred ccchhhhhcccccc
Q 037916 261 LECEILSTLGSCIK 274 (741)
Q Consensus 261 l~~~~~~~~~~l~~ 274 (741)
+++..|..++.+..
T Consensus 234 ~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 234 HSGVVRNSAGSVAP 247 (272)
T ss_dssp TGGGBBCTTSCBCG
T ss_pred CCCcccCcccccCC
Confidence 88888887776654
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=4.8e-26 Score=228.82 Aligned_cols=196 Identities=17% Similarity=0.169 Sum_probs=99.4
Q ss_pred cccEEEccCCcccccCCccccCCCCccEEEccccc-ccccCCccccCCCcCcEEEccc-CCCCCcCcccccCCcccceee
Q 037916 105 TLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQ-LSGTISPAIGELQNLVTLAINT-NKLSGNIPPSIGNLKKLLQLY 182 (741)
Q Consensus 105 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 182 (741)
+|++|++++|++.++.+..|.++++|++|+|++|+ ++++.+..|.++++|++|+|++ |+|+++.+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555544444445555555555555553 4444444455555555555554 455444444444444444444
Q ss_pred ccCcccccccCcccccCCCCCEEeccCccccccCCccccccccce---eEEEcCCC-ccCCCCChhhcCCCCCc-EEEec
Q 037916 183 LIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLS---VGLDLSRN-QLVGSLPTEVGKLINLE-ILFIS 257 (741)
Q Consensus 183 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls 257 (741)
|++|.+++ +|. |..+++|+ . |++++| .+++..+..|..+++|+ .|+++
T Consensus 112 l~~n~l~~-------------------------lp~-~~~l~~L~~L~~-L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 112 IFNTGLKM-------------------------FPD-LTKVYSTDIFFI-LEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEECCCS-------------------------CCC-CTTCCBCCSEEE-EEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred CCCCCCcc-------------------------ccc-cccccccccccE-EECCCCcchhhcCcccccchhcceeEEEcC
Confidence 44444443 333 44444443 4 555555 55544444455555555 55555
Q ss_pred cccccchhhhhccccccccEEEeCCCc-cCCCCChhcccC-ccCCeeeCCCCcCCCccchhhhccccCCcccccCc
Q 037916 258 RNMLECEILSTLGSCIKLEQLKLGGNL-FQGPIPLSLSSL-RGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYN 331 (741)
Q Consensus 258 ~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 331 (741)
+|+++.+.+..|.. ++|+.|+|++|+ ++++.+..|.++ ++|+.|+|++|+|++..+. .+++|+.|+++++
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 55555444444444 556666666663 555555555555 6666666666666543333 3445555555544
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=1.1e-25 Score=226.26 Aligned_cols=197 Identities=18% Similarity=0.172 Sum_probs=152.0
Q ss_pred cCcEEEcccCCCCCcCcccccCCcccceeeccCcc-cccccCcccccCCCCCEEeccC-ccccccCCccccccccceeEE
Q 037916 153 NLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENF-LQVSIPSSLGQCQSLTTINLSY-NNLSGTIPPQLMDLTSLSVGL 230 (741)
Q Consensus 153 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~~L 230 (741)
+|++|+|++|+|+++.+..|.++++|++|++++|. ++.+.+..|.++++|++|+|++ |+|++..+..|.++++|+. |
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~-L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF-L 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE-E
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE-E
Confidence 44455555555554444455555555555555554 5545555666666677777776 6776555667777888887 8
Q ss_pred EcCCCccCCCCChhhcCCCCCc---EEEeccc-cccchhhhhcccccccc-EEEeCCCccCCCCChhcccCccCCeeeCC
Q 037916 231 DLSRNQLVGSLPTEVGKLINLE---ILFISRN-MLECEILSTLGSCIKLE-QLKLGGNLFQGPIPLSLSSLRGLRVLDLS 305 (741)
Q Consensus 231 ~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 305 (741)
++++|++++ +|. |..+++|+ +|++++| .++.+.+..|.++++|+ .|++++|+++.+.+..|.. ++|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 889999886 555 88888888 9999999 99999999999999999 9999999999666666766 899999999
Q ss_pred CCc-CCCccchhhhcc-ccCCcccccCcccccccCCccccCCcccccccCCC
Q 037916 306 QNN-ISGEIPKFLVEL-QLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNS 355 (741)
Q Consensus 306 ~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 355 (741)
+|+ +++..+..|..+ ++|+.|++++|++++.++. .+..+..+.+.++.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC-
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCcc
Confidence 995 998888899999 9999999999999987665 58889998887663
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.3e-26 Score=248.20 Aligned_cols=256 Identities=18% Similarity=0.169 Sum_probs=116.1
Q ss_pred EEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCC----chhhcccccccEEEccCCcccccCCcccc
Q 037916 50 FQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLP----GCICNFSITLETLIFNSNKIFRSIPAGIG 125 (741)
Q Consensus 50 L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~----~~~~~l~~~L~~L~L~~n~i~~~~~~~~~ 125 (741)
+.|++|++++.+|..+....+ |++|||++|+|++..+ ..+..++.+|++|+|++|+|....+..|.
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~----------L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 72 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHG----------VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELV 72 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTT----------CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHH
T ss_pred cccccccchHHHHHHHhCCCC----------ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHH
Confidence 455556665554443333322 5566666665554444 33333332455555555555444444443
Q ss_pred CC-----CCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCC-cccceeeccCcccccccCccccc-
Q 037916 126 KF-----INLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNL-KKLLQLYLIENFLQVSIPSSLGQ- 198 (741)
Q Consensus 126 ~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~- 198 (741)
.+ ++|++|+|++|+|++..+..+... +..+ ++|++|+|++|.|+...+..+..
T Consensus 73 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 132 (362)
T 3goz_A 73 QILAAIPANVTSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQA 132 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred HHHhccCCCccEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHH
Confidence 32 445555555555444333322211 1222 44444444444444333332221
Q ss_pred ----CCCCCEEeccCccccccCC----ccccccc-cceeEEEcCCCccCCCCChhhc----CC-CCCcEEEeccccccch
Q 037916 199 ----CQSLTTINLSYNNLSGTIP----PQLMDLT-SLSVGLDLSRNQLVGSLPTEVG----KL-INLEILFISRNMLECE 264 (741)
Q Consensus 199 ----l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~ 264 (741)
.++|++|+|++|+|++..+ ..+..++ +|+. |+|++|+|++..+..+. .+ ++|++|+|++|.|+..
T Consensus 133 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~-L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 133 FSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNS-LNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp HTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCE-EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccE-eeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 1345555555555542221 1222222 4444 55555555444433222 22 3555555555555542
Q ss_pred ----hhhhccc-cccccEEEeCCCccCCCCCh----hcccCccCCeeeCCCCcCCCccc-------hhhhccccCCcccc
Q 037916 265 ----ILSTLGS-CIKLEQLKLGGNLFQGPIPL----SLSSLRGLRVLDLSQNNISGEIP-------KFLVELQLVQNLNL 328 (741)
Q Consensus 265 ----~~~~~~~-l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~-------~~~~~l~~L~~L~l 328 (741)
.+..+.. .++|++|+|++|++++..+. .+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+
T Consensus 212 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL 291 (362)
T 3goz_A 212 SYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDK 291 (362)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEec
Confidence 2223333 23566666666655544332 23444556666666665433222 23445555666666
Q ss_pred cCcccccc
Q 037916 329 SYNDLEGV 336 (741)
Q Consensus 329 ~~N~l~~~ 336 (741)
++|++...
T Consensus 292 ~~N~l~~~ 299 (362)
T 3goz_A 292 NGKEIHPS 299 (362)
T ss_dssp TSCBCCGG
T ss_pred CCCcCCCc
Confidence 66665544
No 331
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=8.7e-27 Score=249.51 Aligned_cols=233 Identities=15% Similarity=0.170 Sum_probs=122.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccCcccccCC----ccCCCCC-CCcEEEeecCcCcccCCchhhhhhhhhhccc
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIP----SSMFNAS-KLEVFQVTSNNLTGEVPSEFGKATKAYCVQN 76 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~ 76 (741)
+|++|.+.+.+|..+. ..++|++|+|++|+|++..+ +.|.+++ +|++|+|++|+|++..+..|..+-. .
T Consensus 4 ~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~-----~ 77 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILA-----A 77 (362)
T ss_dssp ECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHH-----T
T ss_pred ccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHh-----c
Confidence 4677777777665444 45557777777777776665 6666777 7777777777777666666665411 0
Q ss_pred cCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCC-CCccEEEcccccccccCCcccc----C-
Q 037916 77 CNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKF-INLQTLHMWDNQLSGTISPAIG----E- 150 (741)
Q Consensus 77 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~----~- 150 (741)
+..+|++|+|++|+|++..+..+... +..+ ++|++|+|++|+|++..+..+. .
T Consensus 78 ~~~~L~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~ 136 (362)
T 3goz_A 78 IPANVTSLNLSGNFLSYKSSDELVKT---------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNL 136 (362)
T ss_dssp SCTTCCEEECCSSCGGGSCHHHHHHH---------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTS
T ss_pred cCCCccEEECcCCcCChHHHHHHHHH---------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhC
Confidence 11237777777777765555433332 1112 3455555555555444333322 2
Q ss_pred CCcCcEEEcccCCCCCcCc----ccccCCc-ccceeeccCcccccccCcccc----cC-CCCCEEeccCcccccc----C
Q 037916 151 LQNLVTLAINTNKLSGNIP----PSIGNLK-KLLQLYLIENFLQVSIPSSLG----QC-QSLTTINLSYNNLSGT----I 216 (741)
Q Consensus 151 l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~i~~~~~~~~~----~l-~~L~~L~L~~N~l~~~----~ 216 (741)
.++|++|+|++|+|++... ..+..++ +|++|+|++|.|++..+..+. .+ ++|++|+|++|+|++. +
T Consensus 137 ~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l 216 (362)
T 3goz_A 137 PASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAEL 216 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHH
Confidence 1355555555555543222 2223333 555555555555544433222 22 3566666666665531 2
Q ss_pred Ccccccc-ccceeEEEcCCCccCCCCCh----hhcCCCCCcEEEecccccc
Q 037916 217 PPQLMDL-TSLSVGLDLSRNQLVGSLPT----EVGKLINLEILFISRNMLE 262 (741)
Q Consensus 217 p~~~~~l-~~L~~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 262 (741)
+..+..+ ++|+. |+|++|.|.+..+. .+..+++|++|+|++|.+.
T Consensus 217 ~~~l~~~~~~L~~-L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 217 AYIFSSIPNHVVS-LNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHHHSCTTCCE-EECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHhcCCCCceE-EECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcc
Confidence 3333332 24554 55555555543332 2344455666666666533
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=1.8e-25 Score=236.96 Aligned_cols=251 Identities=16% Similarity=0.226 Sum_probs=194.0
Q ss_pred CccEEECcCCcCcccCCchhhcc--cccccEEEccCCcccccCCccccCCCCccEEEccccccccc-CCccccCCCcCcE
Q 037916 80 HLKHLDINNNNFGGLLPGCICNF--SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT-ISPAIGELQNLVT 156 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l--~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~ 156 (741)
.++.|++++|.+. +..+..+ . +++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~-~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQ-GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHT-TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhc-cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3777777777765 3444444 4 778888888887666554 55678888888888888765 6677888888888
Q ss_pred EEcccCCCCCcCcccccCCcccceeeccCc-ccccc-cCcccccCCCCCEEeccCc-ccccc-CCccccccc-cceeEEE
Q 037916 157 LAINTNKLSGNIPPSIGNLKKLLQLYLIEN-FLQVS-IPSSLGQCQSLTTINLSYN-NLSGT-IPPQLMDLT-SLSVGLD 231 (741)
Q Consensus 157 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~~L~ 231 (741)
|+|++|++++..+..|+.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|+. |+
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~-L~ 201 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQ-LN 201 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCE-EE
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCE-EE
Confidence 888888888777788888888888888888 67653 5666788889999999998 88754 566778888 8887 99
Q ss_pred cCCCc--cC-CCCChhhcCCCCCcEEEecccc-ccchhhhhccccccccEEEeCCCc-cCCCCChhcccCccCCeeeCCC
Q 037916 232 LSRNQ--LV-GSLPTEVGKLINLEILFISRNM-LECEILSTLGSCIKLEQLKLGGNL-FQGPIPLSLSSLRGLRVLDLSQ 306 (741)
Q Consensus 232 Ls~N~--l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~ 306 (741)
+++|. ++ +.+|..+..+++|++|+|++|. ++...+..+..+++|+.|++++|. +.......+..+++|+.|+|++
T Consensus 202 l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 202 LSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp CCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred eCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccC
Confidence 99984 44 3456778889999999999998 777778888999999999999995 3322223688899999999999
Q ss_pred CcCCCccchhhhcc-ccCCcccccCcccccccCCc
Q 037916 307 NNISGEIPKFLVEL-QLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 307 N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~ 340 (741)
| ++ ...+..+ ..+..|++++|.+++..|..
T Consensus 282 ~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 282 I-VP---DGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp S-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred c-cC---HHHHHHHHhhCcceEEecccCccccCCc
Confidence 9 44 2344455 35888899999999988765
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=4.8e-25 Score=230.70 Aligned_cols=199 Identities=20% Similarity=0.127 Sum_probs=122.7
Q ss_pred cccEEEccCCcccccCCccc--cCCCCccEEEcccccccccCC----ccccCCCcCcEEEcccCCCCCcCcccccCCccc
Q 037916 105 TLETLIFNSNKIFRSIPAGI--GKFINLQTLHMWDNQLSGTIS----PAIGELQNLVTLAINTNKLSGNIPPSIGNLKKL 178 (741)
Q Consensus 105 ~L~~L~L~~n~i~~~~~~~~--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 178 (741)
+|++|++++|++.+..|..+ ..+++|++|+|++|+|++..+ ..+..+++|++|+|++|++++..+..|.++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46666666666655555555 566666666666666664333 233456666666666666666666666666666
Q ss_pred ceeeccCcccccc---c-CcccccCCCCCEEeccCccccccCCc----cccccccceeEEEcCCCccCCCCChhhcCC--
Q 037916 179 LQLYLIENFLQVS---I-PSSLGQCQSLTTINLSYNNLSGTIPP----QLMDLTSLSVGLDLSRNQLVGSLPTEVGKL-- 248 (741)
Q Consensus 179 ~~L~L~~N~i~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l-- 248 (741)
++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .+.++++|+. |+|++|+|.+..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~-L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHS-LDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSS-EECTTSCCCCCCCSCCSSCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCE-EECCCCCCCccchhhHHhccC
Confidence 6666666665431 1 222355666666666666665 2222 2345566665 7777777766656555555
Q ss_pred -CCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCC
Q 037916 249 -INLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNIS 310 (741)
Q Consensus 249 -~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 310 (741)
++|++|+|++|+|+.+ |..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 250 ~~~L~~L~Ls~N~l~~l-p~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLEQV-PKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCCSC-CSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCCch-hhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 5777777777777744 33332 5777777777777754 32 567778888888888776
No 334
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.92 E-value=7.1e-25 Score=233.45 Aligned_cols=243 Identities=16% Similarity=0.123 Sum_probs=149.9
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccc-cCCccccCCCcCcE-E
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG-TISPAIGELQNLVT-L 157 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~-L 157 (741)
.-++++.++|+|+ .+|..+ ..++++|+|++|+|..+.+.+|.++++|++|+|++|+|.+ +.+++|.++++|.+ +
T Consensus 10 ~~~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 10 SNRVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp ETTEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred eCCEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 3467777777777 344433 2267777777777766666677777777777777777644 34456777777654 5
Q ss_pred EcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccC-ccccccCCcccccccc-ceeEEEcCCC
Q 037916 158 AINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY-NNLSGTIPPQLMDLTS-LSVGLDLSRN 235 (741)
Q Consensus 158 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~-L~~~L~Ls~N 235 (741)
.+++|+|+.+.|++|.++++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+.. ++. |+|++|
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~-L~L~~N 164 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVI-LWLNKN 164 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEE-EECCSS
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhh-hccccc
Confidence 5566777766677777777777777777777766666666666666676644 4565444455555543 444 777777
Q ss_pred ccCCCCChhhcCCCCCcEEEec-cccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccc
Q 037916 236 QLVGSLPTEVGKLINLEILFIS-RNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIP 314 (741)
Q Consensus 236 ~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (741)
+|+.+.+..| ...+|+.|+++ +|.++.+.++.|.++++|++|+|++|+|+.+.+..|.++++|+.+++ ++++ .+|
T Consensus 165 ~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP 240 (350)
T 4ay9_X 165 GIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP 240 (350)
T ss_dssp CCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC
T ss_pred cccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC
Confidence 7764443333 34566666665 35666666666677777777777777776555555554444443332 2233 344
Q ss_pred hhhhccccCCcccccCcc
Q 037916 315 KFLVELQLVQNLNLSYND 332 (741)
Q Consensus 315 ~~~~~l~~L~~L~l~~N~ 332 (741)
.+..+++|+.++++++.
T Consensus 241 -~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 241 -TLEKLVALMEASLTYPS 257 (350)
T ss_dssp -CTTTCCSCCEEECSCHH
T ss_pred -CchhCcChhhCcCCCCc
Confidence 25566666666666543
No 335
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=1.7e-26 Score=249.67 Aligned_cols=265 Identities=18% Similarity=0.202 Sum_probs=156.6
Q ss_pred cCCccCCCCCCCcEEEeecCcCcccCCch----hhhhhhhhhccccCCCccEEECcCCcCc---ccCCchhhcccccccE
Q 037916 36 VIPSSMFNASKLEVFQVTSNNLTGEVPSE----FGKATKAYCVQNCNQHLKHLDINNNNFG---GLLPGCICNFSITLET 108 (741)
Q Consensus 36 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~~~~~~~~~~~L~~L~Ls~N~l~---~~~~~~~~~l~~~L~~ 108 (741)
.++..+..+++|++|+|++|+|+...+.. |..++ +|++|+|++|.+. +..|..+..+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~----------~L~~L~Ls~~~~~~l~~~~~~~~~~l------ 86 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKK----------DLEIAEFSDIFTGRVKDEIPEALRLL------ 86 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCT----------TCCEEECCSCCTTSCGGGSHHHHHHH------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCC----------CccEEeCcccccCccccchhHHHHHH------
Confidence 34555666677777777777776543333 22333 3677777665333 2233322111
Q ss_pred EEccCCcccccCCccccCCCCccEEEcccccccc----cCCccccCCCcCcEEEcccCCCCCcCcccccC----C-----
Q 037916 109 LIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG----TISPAIGELQNLVTLAINTNKLSGNIPPSIGN----L----- 175 (741)
Q Consensus 109 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l----- 175 (741)
...|..+++|++|+|++|+|+. .++..+..+++|++|+|++|.|+...+..+.. +
T Consensus 87 ------------~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~ 154 (386)
T 2ca6_A 87 ------------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKK 154 (386)
T ss_dssp ------------HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhh
Confidence 1233556667777777776665 34556666667777777777765433333332 2
Q ss_pred ----cccceeeccCcccc-cccC---cccccCCCCCEEeccCccccc-----cCCccccccccceeEEEcCCCccC----
Q 037916 176 ----KKLLQLYLIENFLQ-VSIP---SSLGQCQSLTTINLSYNNLSG-----TIPPQLMDLTSLSVGLDLSRNQLV---- 238 (741)
Q Consensus 176 ----~~L~~L~L~~N~i~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~~L~Ls~N~l~---- 238 (741)
++|++|+|++|+++ ...+ ..|..+++|++|+|++|+|+. ..|..+..+++|+. |+|++|.|+
T Consensus 155 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~-L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 155 AKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKV-LDLQDNTFTHLGS 233 (386)
T ss_dssp HHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCE-EECCSSCCHHHHH
T ss_pred cccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccE-EECcCCCCCcHHH
Confidence 66777777777665 2333 355566777777777777652 33445666677766 777777764
Q ss_pred CCCChhhcCCCCCcEEEeccccccch----hhhhcc--ccccccEEEeCCCccCC----CCChhc-ccCccCCeeeCCCC
Q 037916 239 GSLPTEVGKLINLEILFISRNMLECE----ILSTLG--SCIKLEQLKLGGNLFQG----PIPLSL-SSLRGLRVLDLSQN 307 (741)
Q Consensus 239 ~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N 307 (741)
..+|..+..+++|++|+|++|.|+.. .+..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 34566677777777777777777755 344442 36777777777777775 355555 55777777777777
Q ss_pred cCCCccc--hh-hhccccCCccccc
Q 037916 308 NISGEIP--KF-LVELQLVQNLNLS 329 (741)
Q Consensus 308 ~l~~~~~--~~-~~~l~~L~~L~l~ 329 (741)
.+++..+ .. ...+++++.+++.
T Consensus 314 ~l~~~~~~~~~l~~~l~~~~~~~l~ 338 (386)
T 2ca6_A 314 RFSEEDDVVDEIREVFSTRGRGELD 338 (386)
T ss_dssp BSCTTSHHHHHHHHHHHHHTCCEEC
T ss_pred cCCcchhHHHHHHHHhhhcCcchhh
Confidence 7776553 22 2234444444443
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=5.1e-25 Score=230.52 Aligned_cols=200 Identities=22% Similarity=0.217 Sum_probs=128.4
Q ss_pred CCccEEEcccccccccCCccc--cCCCcCcEEEcccCCCCCcCc----ccccCCcccceeeccCcccccccCcccccCCC
Q 037916 128 INLQTLHMWDNQLSGTISPAI--GELQNLVTLAINTNKLSGNIP----PSIGNLKKLLQLYLIENFLQVSIPSSLGQCQS 201 (741)
Q Consensus 128 ~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 201 (741)
++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+.+..+..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 457777777777776666666 667777777777777765433 23445667777777777777666667777777
Q ss_pred CCEEeccCcccccc--C--CccccccccceeEEEcCCCccCCCCCh----hhcCCCCCcEEEeccccccchhhhhcccc-
Q 037916 202 LTTINLSYNNLSGT--I--PPQLMDLTSLSVGLDLSRNQLVGSLPT----EVGKLINLEILFISRNMLECEILSTLGSC- 272 (741)
Q Consensus 202 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l- 272 (741)
|++|+|++|++.+. + +..+..+++|++ |+|++|+++ .++. .++.+++|++|+|++|+|++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~-L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQN-LALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCS-CBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCE-EECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 77777777766531 1 222356666766 777777775 2232 24566777777777777776655555554
Q ss_pred --ccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccc
Q 037916 273 --IKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLE 334 (741)
Q Consensus 273 --~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 334 (741)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 57777777777777 3444443 5777777777777753 22 456677777777777765
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=3.5e-26 Score=247.23 Aligned_cols=242 Identities=18% Similarity=0.191 Sum_probs=188.2
Q ss_pred CCchhhcccccccEEEccCCcccccC----CccccCCCCccEEEcccccc---cccCCcc-------ccCCCcCcEEEcc
Q 037916 95 LPGCICNFSITLETLIFNSNKIFRSI----PAGIGKFINLQTLHMWDNQL---SGTISPA-------IGELQNLVTLAIN 160 (741)
Q Consensus 95 ~~~~~~~l~~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i---~~~~~~~-------~~~l~~L~~L~L~ 160 (741)
++..+..++ +|++|+|++|++.... +..|..+++|++|+|++|.+ ++..|.. |..+++|++|+|+
T Consensus 24 l~~~l~~~~-~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDD-SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TSHHHHHCS-CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHhcCC-CccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 334444444 5666666666665442 23466788888888888644 3344444 4788999999999
Q ss_pred cCCCCC----cCcccccCCcccceeeccCcccccccCccccc----C---------CCCCEEeccCcccc-ccCC---cc
Q 037916 161 TNKLSG----NIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQ----C---------QSLTTINLSYNNLS-GTIP---PQ 219 (741)
Q Consensus 161 ~N~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~----l---------~~L~~L~L~~N~l~-~~~p---~~ 219 (741)
+|+++. .++..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+|+ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999987 46778899999999999999997554444443 3 89999999999997 3444 46
Q ss_pred ccccccceeEEEcCCCccCC-----CCChhhcCCCCCcEEEecccccc----chhhhhccccccccEEEeCCCccCCC--
Q 037916 220 LMDLTSLSVGLDLSRNQLVG-----SLPTEVGKLINLEILFISRNMLE----CEILSTLGSCIKLEQLKLGGNLFQGP-- 288 (741)
Q Consensus 220 ~~~l~~L~~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~-- 288 (741)
+..+++|+. |+|++|+|.. ..|..+..+++|++|+|++|.|+ ...+..+..+++|+.|+|++|++++.
T Consensus 183 l~~~~~L~~-L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 183 FQSHRLLHT-VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHCTTCCE-EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHhCCCcCE-EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 678889997 9999999872 34447889999999999999996 56778889999999999999999865
Q ss_pred --CChhcc--cCccCCeeeCCCCcCCC----ccchhh-hccccCCcccccCcccccccC
Q 037916 289 --IPLSLS--SLRGLRVLDLSQNNISG----EIPKFL-VELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 289 --~~~~~~--~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~~ 338 (741)
++.++. .+++|+.|+|++|.|++ .+|..+ .++++|+.|+|++|++++..+
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 455663 38999999999999997 377766 668999999999999987654
No 338
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=2.7e-24 Score=228.98 Aligned_cols=221 Identities=18% Similarity=0.101 Sum_probs=145.9
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCccccCCCCccE-EEcccccccccCCccccCCCcCcEEE
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAGIGKFINLQT-LHMWDNQLSGTISPAIGELQNLVTLA 158 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~-L~L~~N~i~~~~~~~~~~l~~L~~L~ 158 (741)
+++|+|++|+|+.+.++.|.+++ +|++|+|++|++.+. .+.+|.++++|++ +.+++|+|+.+.++.|.++++|++|+
T Consensus 32 l~~L~Ls~N~i~~i~~~~f~~l~-~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 32 AIELRFVLTKLRVIQKGAFSGFG-DLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp CSEEEEESCCCSEECTTSSTTCT-TCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCEEEccCCcCCCcCHHHHcCCC-CCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 55666666666555555555555 566666666665443 3345666666654 55566777777777777777777777
Q ss_pred cccCCCCCcCcccccCCcccceeeccC-cccccccCcccccCC-CCCEEeccCccccccCCccccccccceeEEEcCC-C
Q 037916 159 INTNKLSGNIPPSIGNLKKLLQLYLIE-NFLQVSIPSSLGQCQ-SLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSR-N 235 (741)
Q Consensus 159 L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~-N 235 (741)
+++|+|+...+..+....++..|++.+ |.+..+.+..|..+. .++.|+|++|+|+ .+|...+..++++. |++++ |
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~-l~l~~~n 188 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDE-LNLSDNN 188 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEE-EECTTCT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhH-HhhccCC
Confidence 777777766666666666677777754 566666666666654 5777888888887 45555555667776 88764 6
Q ss_pred ccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCc
Q 037916 236 QLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNN 308 (741)
Q Consensus 236 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 308 (741)
.++.+.+..|..+++|++|+|++|+|+.+++..|.++++|+.+++ +.++ .+| .+..+++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 676555567888888888888888888777666665554444433 3344 445 47788888888887653
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.4e-25 Score=237.65 Aligned_cols=257 Identities=21% Similarity=0.188 Sum_probs=206.2
Q ss_pred CCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCccccc-CCcc
Q 037916 45 SKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRS-IPAG 123 (741)
Q Consensus 45 ~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~-~~~~ 123 (741)
..++.|++++|.+. +..+..+.. ++++.|++++|.+.+..+. +..+. +|++|+|++|.+... .+..
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~--------~~l~~L~l~~n~l~~~~~~-~~~~~-~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLS--------QGVIAFRCPRSFMDQPLAE-HFSPF-RVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHH--------TTCSEEECTTCEECSCCCS-CCCCB-CCCEEECTTCEECHHHHHHH
T ss_pred hhheeeccccccCC---HHHHHhhhh--------ccceEEEcCCccccccchh-hccCC-CCCEEEccCCCcCHHHHHHH
Confidence 34788999998887 455666521 2499999999999877666 44566 899999999998765 7778
Q ss_pred ccCCCCccEEEcccccccccCCccccCCCcCcEEEcccC-CCCCc-CcccccCCcccceeeccCc-ccccc-cCcccccC
Q 037916 124 IGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTN-KLSGN-IPPSIGNLKKLLQLYLIEN-FLQVS-IPSSLGQC 199 (741)
Q Consensus 124 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~i~~~-~~~~~~~l 199 (741)
+..+++|++|+|++|.+++..+..+..+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++..+..+
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l 193 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 193 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhc
Confidence 889999999999999998888888899999999999999 67753 5666888999999999999 88864 57778889
Q ss_pred C-CCCEEeccCc--ccc-ccCCccccccccceeEEEcCCCc-cCCCCChhhcCCCCCcEEEecccc-ccchhhhhccccc
Q 037916 200 Q-SLTTINLSYN--NLS-GTIPPQLMDLTSLSVGLDLSRNQ-LVGSLPTEVGKLINLEILFISRNM-LECEILSTLGSCI 273 (741)
Q Consensus 200 ~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~ 273 (741)
+ +|++|+|++| .++ +.+|..+..+++|+. |++++|. +++..+..+..+++|++|++++|. +.......+..++
T Consensus 194 ~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~-L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~ 272 (336)
T 2ast_B 194 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH-LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP 272 (336)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE-EECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCT
T ss_pred ccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE-EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCC
Confidence 9 9999999999 454 456777788999997 9999999 776777788999999999999994 4433344688899
Q ss_pred cccEEEeCCCccCCCCChhcccC-ccCCeeeCCCCcCCCccchhhhc
Q 037916 274 KLEQLKLGGNLFQGPIPLSLSSL-RGLRVLDLSQNNISGEIPKFLVE 319 (741)
Q Consensus 274 ~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 319 (741)
+|+.|++++| +. ...+..+ ..|..|++++|++++..|..+..
T Consensus 273 ~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 273 TLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 9999999999 43 3344454 34888889999999988877654
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.1e-24 Score=215.08 Aligned_cols=182 Identities=24% Similarity=0.269 Sum_probs=106.1
Q ss_pred ccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCc
Q 037916 76 NCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLV 155 (741)
Q Consensus 76 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 155 (741)
.|....++++++++.++. +|..+. .+|+.|+|++|++.+..+..|.++++|++|+|++|+|+++.+..|.++++|+
T Consensus 11 ~C~~~~~~l~~~~~~l~~-~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 86 (251)
T 3m19_A 11 TCNEGKKEVDCQGKSLDS-VPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86 (251)
T ss_dssp EEEGGGTEEECTTCCCSS-CCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred EcCCCCeEEecCCCCccc-cCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCC
Confidence 344457778888877773 343322 2566667777666666666666666666666666666666666666666666
Q ss_pred EEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCC
Q 037916 156 TLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRN 235 (741)
Q Consensus 156 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N 235 (741)
+|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+. |+|++|
T Consensus 87 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~L~~N 165 (251)
T 3m19_A 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT-LSLSTN 165 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE-EECCSS
T ss_pred EEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCE-EECCCC
Confidence 6666666666555555666666666666666665555555555555555555555555443334555555554 555555
Q ss_pred ccCCCCChhhcCCCCCcEEEecccccc
Q 037916 236 QLVGSLPTEVGKLINLEILFISRNMLE 262 (741)
Q Consensus 236 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 262 (741)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 166 ~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 166 QLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 555444444444444444444444443
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.6e-24 Score=214.84 Aligned_cols=180 Identities=22% Similarity=0.206 Sum_probs=97.3
Q ss_pred cccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeecc
Q 037916 105 TLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLI 184 (741)
Q Consensus 105 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 184 (741)
..++++++++.+. .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455555555553 2333333 245555555555555555555555555555555555554444444444444444444
Q ss_pred CcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccch
Q 037916 185 ENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECE 264 (741)
Q Consensus 185 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 264 (741)
+|.|++..+. .|..+++|+. |+|++|+|++..+..|..+++|++|+|++|+|+++
T Consensus 92 ~n~l~~~~~~------------------------~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 NNQLASLPLG------------------------VFDHLTQLDK-LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TSCCCCCCTT------------------------TTTTCTTCCE-EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcccccChh------------------------HhcccCCCCE-EEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 4444444334 4444444444 55555555444444455555555555555555555
Q ss_pred hhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCc
Q 037916 265 ILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGE 312 (741)
Q Consensus 265 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 312 (741)
.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555566666666666666666666666666666777777777766644
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=4.1e-24 Score=223.14 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=133.8
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcc
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAIN 160 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 160 (741)
+..+.+..+.+.+... +..+. +|++|++++|.+... + .+..+++|++|+|++|+|+++.+ +..+++|++|+|+
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~-~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLD-GITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHH-TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHhCCCCcCceec--HHHcC-CcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc
Confidence 3344566666664433 33455 777788887777543 3 57777777777777777776544 7777777777777
Q ss_pred cCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCC
Q 037916 161 TNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240 (741)
Q Consensus 161 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~ 240 (741)
+|++++. ..|..+++|++|+|++|.+++.. .+..+++|++|+|++|++++..+ +..+++|+. |+|++|.+++.
T Consensus 94 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~-L~l~~n~l~~~ 166 (308)
T 1h6u_A 94 GNPLKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQY-LSIGNAQVSDL 166 (308)
T ss_dssp SCCCSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE-EECCSSCCCCC
T ss_pred CCcCCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccE-EEccCCcCCCC
Confidence 7777743 25777777777777777776532 26667777777777777763322 666666665 66666666643
Q ss_pred CChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCC
Q 037916 241 LPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 241 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
.+ +..+++|+.|+|++|+++++.+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|.+++
T Consensus 167 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 TP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 32 6666666666666666665443 5566666666666666664432 5566666666666666653
No 343
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=3.9e-26 Score=261.56 Aligned_cols=271 Identities=13% Similarity=-0.001 Sum_probs=149.9
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCccc---ccCCccccCCCCccEEEcccccccccCCccccCCCcCcEE
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIF---RSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTL 157 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 157 (741)
|++|+|++|.+.+ .+..+..++ +|++|+++.+... ...+..+..+++|+.|+++++... ..+..+..+++|++|
T Consensus 222 L~~L~L~~~~~~~-l~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L 298 (592)
T 3ogk_B 222 LVSVKVGDFEILE-LVGFFKAAA-NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKL 298 (592)
T ss_dssp CCEEECSSCBGGG-GHHHHHHCT-TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEE
T ss_pred CcEEeccCccHHH-HHHHHhhhh-HHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEE
Confidence 4444444444443 233344443 4444444432211 112233444455555555554322 344556666677777
Q ss_pred EcccCCCCCcCc-ccccCCcccceeeccCcccccccCcccccCCCCCEEecc-----------Ccccccc-CCccccccc
Q 037916 158 AINTNKLSGNIP-PSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS-----------YNNLSGT-IPPQLMDLT 224 (741)
Q Consensus 158 ~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~ 224 (741)
+|++|.+++... ..+..+++|++|+|+++.....++..+..+++|++|+|+ .|.+++. ++..+..++
T Consensus 299 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 378 (592)
T 3ogk_B 299 DLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQ 378 (592)
T ss_dssp EETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCT
T ss_pred ecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCc
Confidence 777777654332 234666777777776332222333344556777777777 2455432 112233466
Q ss_pred cceeEEEcCCCccCCCCChhhcC-CCCCcEEEec----cccccch-----hhhhccccccccEEEeCCC--ccCCCCChh
Q 037916 225 SLSVGLDLSRNQLVGSLPTEVGK-LINLEILFIS----RNMLECE-----ILSTLGSCIKLEQLKLGGN--LFQGPIPLS 292 (741)
Q Consensus 225 ~L~~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~L~~N--~l~~~~~~~ 292 (741)
+|+. |+++.|.+++..+..+.. +++|+.|+|+ .|.+++. .+..+.++++|+.|+|++| .+++.....
T Consensus 379 ~L~~-L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 379 ELEY-MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TCSE-EEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred cCeE-EEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 6765 777777766555555544 6777777775 5666642 3344566777777777643 244443333
Q ss_pred cc-cCccCCeeeCCCCcCCC-ccchhhhccccCCcccccCcccccccCC--ccccCCcccccccCCC
Q 037916 293 LS-SLRGLRVLDLSQNNISG-EIPKFLVELQLVQNLNLSYNDLEGVIPT--EGVFKNASAISVFGNS 355 (741)
Q Consensus 293 ~~-~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~~~~~~~~~~~n~ 355 (741)
+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|+++..... ...+++++.+++.+|.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 33 36778888888887765 2445556777888888888877643221 1346677777777775
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.1e-23 Score=219.89 Aligned_cols=193 Identities=27% Similarity=0.373 Sum_probs=97.7
Q ss_pred CCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEE
Q 037916 126 KFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTI 205 (741)
Q Consensus 126 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 205 (741)
.+++|++|++++|.|+.+ + .+..+++|++|+|++|+++++.+ |..+++|++|+|++|.+++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 344555555555555532 1 34555555555555555553322 55555555555555555432 235555555555
Q ss_pred eccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCcc
Q 037916 206 NLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLF 285 (741)
Q Consensus 206 ~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 285 (741)
+|++|++++ ++. +..+++|+. |++++|.+++..+ ++.+++|+.|+|++|+++.+.+ +..+++|+.|++++|++
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~-L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQV-LYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCE-EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCE-EECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 555555553 222 555555554 5555555553322 5555555555555555554333 55555555555555555
Q ss_pred CCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccc
Q 037916 286 QGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEG 335 (741)
Q Consensus 286 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 335 (741)
++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 54332 4555555555555555554332 4555555555555555544
No 345
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=8.1e-26 Score=258.95 Aligned_cols=319 Identities=13% Similarity=0.032 Sum_probs=237.7
Q ss_pred CCCCCccccc----CChhhhhCCCCCcEEEcccCcccc----cCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhh
Q 037916 2 DVGVNRVQGG----IPLDFGFTLPNLLFLSLGFNQITG----VIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYC 73 (741)
Q Consensus 2 dl~~n~~~~~----ip~~~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~ 73 (741)
||++|.+.+. ++. +...+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..+++
T Consensus 170 ~L~~~~~~~~~~~~l~~-~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~--- 244 (592)
T 3ogk_B 170 LMEESSFSEKDGKWLHE-LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN--- 244 (592)
T ss_dssp ECTTCEEECCCSHHHHH-HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT---
T ss_pred ECccccccCcchhHHHH-HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH---
Confidence 5667776544 332 33367888888888888763 334445577888888888888874 5566777765
Q ss_pred ccccCCCccEEECcCCcCc---ccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCC-cccc
Q 037916 74 VQNCNQHLKHLDINNNNFG---GLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTIS-PAIG 149 (741)
Q Consensus 74 ~~~~~~~L~~L~Ls~N~l~---~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~ 149 (741)
|++|+++.+... +..+..+..+. +|+.|.++++.. ...|..+..+++|++|+|++|.+++... ..+.
T Consensus 245 -------L~~L~l~~~~~~~~~~~~~~~l~~~~-~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~ 315 (592)
T 3ogk_B 245 -------LEEFCGGSLNEDIGMPEKYMNLVFPR-KLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQ 315 (592)
T ss_dssp -------CCEEEECBCCCCTTCTTSSSCCCCCT-TCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHT
T ss_pred -------HHhhcccccccccchHHHHHHhhccc-cccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHH
Confidence 999999864433 22334455666 899999998754 5677888899999999999999875444 4468
Q ss_pred CCCcCcEEEcccCCCCC-cCcccccCCcccceeecc-----------Cccccccc-CcccccCCCCCEEeccCccccccC
Q 037916 150 ELQNLVTLAINTNKLSG-NIPPSIGNLKKLLQLYLI-----------ENFLQVSI-PSSLGQCQSLTTINLSYNNLSGTI 216 (741)
Q Consensus 150 ~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~-----------~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~ 216 (741)
++++|++|+|+ |.+.. .++..+..+++|++|+|+ .|.++... +..+..+++|++|+++.|++++..
T Consensus 316 ~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~ 394 (592)
T 3ogk_B 316 KCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNES 394 (592)
T ss_dssp TCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHH
T ss_pred hCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHH
Confidence 89999999999 55543 334444678999999999 36676442 333556899999999999998777
Q ss_pred Cccccc-cccceeEEEcC----CCccCCC-----CChhhcCCCCCcEEEeccc--cccchhhhhcc-ccccccEEEeCCC
Q 037916 217 PPQLMD-LTSLSVGLDLS----RNQLVGS-----LPTEVGKLINLEILFISRN--MLECEILSTLG-SCIKLEQLKLGGN 283 (741)
Q Consensus 217 p~~~~~-l~~L~~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~-~l~~L~~L~L~~N 283 (741)
+..+.. +++|+. |+++ .|.+++. ++..+.++++|++|+|++| .++......+. .+++|+.|+|++|
T Consensus 395 ~~~l~~~~~~L~~-L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n 473 (592)
T 3ogk_B 395 LESIGTYLKNLCD-FRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYV 473 (592)
T ss_dssp HHHHHHHCCSCCE-EEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSC
T ss_pred HHHHHhhCCCCcE-EEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCC
Confidence 666665 888987 9996 7888864 3334778999999999854 46665555554 4899999999999
Q ss_pred ccCCC-CChhcccCccCCeeeCCCCcCCCc-cchhhhccccCCcccccCcccccc
Q 037916 284 LFQGP-IPLSLSSLRGLRVLDLSQNNISGE-IPKFLVELQLVQNLNLSYNDLEGV 336 (741)
Q Consensus 284 ~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 336 (741)
++++. .+..+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|+++..
T Consensus 474 ~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 474 GESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 99863 345567899999999999998754 455567899999999999998765
No 346
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=6.2e-25 Score=246.07 Aligned_cols=185 Identities=15% Similarity=0.097 Sum_probs=138.7
Q ss_pred HhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--------cchhHHHHHHHHHhcCCCceeeEeeeecCccccCCc
Q 037916 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--------ASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDD 475 (741)
Q Consensus 404 ~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 475 (741)
..+.||+|+||.||+|.. .+..+|+|+....... ..+++.+|+.++++++||||+++..++. ...
T Consensus 340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-----~~~ 412 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV-----DLD 412 (540)
T ss_dssp --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE-----ETT
T ss_pred CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE-----eCC
Confidence 356899999999999955 4778899987532211 1234689999999999999994444322 233
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceE
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 555 (741)
..|+||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+|
T Consensus 413 ~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~k 469 (540)
T 3en9_A 413 NKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLY 469 (540)
T ss_dssp TTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEE
T ss_pred ccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEE
Confidence 56999999999999999862 357999999999999999 9999999999999998 999
Q ss_pred EeecccccccCCCCccc-----ccccccccccccCcccccCC--CCCCCccCchhHHHHHHHHHcCCCCCC
Q 037916 556 VADFGLAKLLPPAHLQT-----SSIGVKGTIGYIAPAEYGLG--SEVSINGDVYSYGILLLELMTRKRPSD 619 (741)
Q Consensus 556 L~DFg~a~~~~~~~~~~-----~~~~~~gt~~y~aPEe~~~~--~~~~~~~DIwSlG~il~elltg~~p~~ 619 (741)
|+|||+++......... ......||+.|+|||.+ .. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 470 L~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~-~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 470 IIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIW-ERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp ECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 99999999876542211 11235699999999544 33 457888999999999998888777653
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.1e-22 Score=197.56 Aligned_cols=181 Identities=18% Similarity=0.241 Sum_probs=112.3
Q ss_pred cEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhccc
Q 037916 24 LFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFS 103 (741)
Q Consensus 24 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 103 (741)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++ |++|+|++|+|+++.+..|..+.
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~----------L~~L~l~~n~l~~~~~~~~~~l~ 76 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTS----------LTQLYLGGNKLQSLPNGVFNKLT 76 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTT----------CSEEECCSSCCCCCCTTTTTTCT
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhccccc----------CcEEECCCCccCccChhhcCCCC
Confidence 345555565553 23222 235666666666666554445555544 66666666666655555555555
Q ss_pred ccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeec
Q 037916 104 ITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYL 183 (741)
Q Consensus 104 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 183 (741)
+|++|+|++|++.+..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.+..|..+++|++|+|
T Consensus 77 -~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 77 -SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 155 (208)
T ss_dssp -TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred -CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEe
Confidence 6666666666666555555666667777777777776666666666777777777777776665556666777777777
Q ss_pred cCcccccccCcccccCCCCCEEeccCccccccCCcccccccc
Q 037916 184 IENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTS 225 (741)
Q Consensus 184 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 225 (741)
++|.+. +.+++|+.|+++.|+++|.+|..++.++.
T Consensus 156 ~~N~~~-------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 156 HDNPWD-------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CSCCBC-------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCCee-------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 777554 23456777777777777777776666543
No 348
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=8.2e-25 Score=250.66 Aligned_cols=324 Identities=13% Similarity=0.108 Sum_probs=185.4
Q ss_pred hhCCCCCcEEEcccCcccccCCccCC-CCCCCcEEEeecC-cCccc-CCchhhhhhhhhhccccCCCccEEECcCCcCcc
Q 037916 17 GFTLPNLLFLSLGFNQITGVIPSSMF-NASKLEVFQVTSN-NLTGE-VPSEFGKATKAYCVQNCNQHLKHLDINNNNFGG 93 (741)
Q Consensus 17 ~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~ 93 (741)
...+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..++ +|++|+|++|.+++
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~----------~L~~L~L~~~~i~~ 170 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCR----------NLKELDLRESDVDD 170 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCT----------TCCEEECTTCEEEC
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCC----------CCCEEeCcCCccCC
Confidence 34678888888888888776666664 5788888888888 55532 222233444 38888888888776
Q ss_pred cCCchhh----cccccccEEEccCCcccccCCcc----ccCCCCccEEEcccc-cccccCCccccCCCcCcEEEcccCC-
Q 037916 94 LLPGCIC----NFSITLETLIFNSNKIFRSIPAG----IGKFINLQTLHMWDN-QLSGTISPAIGELQNLVTLAINTNK- 163 (741)
Q Consensus 94 ~~~~~~~----~l~~~L~~L~L~~n~i~~~~~~~----~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~- 163 (741)
..+..+. .++ +|++|++++|. ....... +..+++|++|+|++| .+++ .+..+..+++|+.|+++.+.
T Consensus 171 ~~~~~l~~~~~~~~-~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~ 247 (594)
T 2p1m_B 171 VSGHWLSHFPDTYT-SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTA 247 (594)
T ss_dssp CCGGGGGGSCTTCC-CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCC
T ss_pred cchHHHHHHhhcCC-cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccC
Confidence 5544443 333 78888888876 1111122 234578888888877 3333 44555556666666644431
Q ss_pred -------------------------CCC----cCcccccCCcccceeeccCcccccccC-cccccCCCCCEEeccCcccc
Q 037916 164 -------------------------LSG----NIPPSIGNLKKLLQLYLIENFLQVSIP-SSLGQCQSLTTINLSYNNLS 213 (741)
Q Consensus 164 -------------------------l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~ 213 (741)
+.. .++..+..+++|++|+|++|.++.... ..+..+++|++|++++| ++
T Consensus 248 ~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~ 326 (594)
T 2p1m_B 248 EVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IE 326 (594)
T ss_dssp CCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GH
T ss_pred ccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cC
Confidence 111 122223356777788887777654322 22456777777777777 43
Q ss_pred cc-CCccccccccceeEEEcC---------CCccCCCCChhh-cCCCCCcEEEeccccccchhhhhcc-ccccccEEEeC
Q 037916 214 GT-IPPQLMDLTSLSVGLDLS---------RNQLVGSLPTEV-GKLINLEILFISRNMLECEILSTLG-SCIKLEQLKLG 281 (741)
Q Consensus 214 ~~-~p~~~~~l~~L~~~L~Ls---------~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~ 281 (741)
.. ++.....+++|+. |+++ .|.+++.....+ ..+++|+.|+++.|.++......+. .+++|+.|+|+
T Consensus 327 ~~~l~~l~~~~~~L~~-L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 327 DAGLEVLASTCKDLRE-LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHHHHHHHHCTTCCE-EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHHhCCCCCE-EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 21 2222224566665 7663 234432222222 2367777777777777665555554 46777777777
Q ss_pred --C----CccCCCCC-----hhcccCccCCeeeCCCCcCCCccchhhhc-cccCCcccccCcccccccCCc--cccCCcc
Q 037916 282 --G----NLFQGPIP-----LSLSSLRGLRVLDLSQNNISGEIPKFLVE-LQLVQNLNLSYNDLEGVIPTE--GVFKNAS 347 (741)
Q Consensus 282 --~----N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~--~~~~~~~ 347 (741)
+ |.+++... ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..... ..+++++
T Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~ 484 (594)
T 2p1m_B 406 IIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLR 484 (594)
T ss_dssp ESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCC
T ss_pred cccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcC
Confidence 3 45552221 1245566677777755 555444444443 566777777777665432211 2255666
Q ss_pred cccccCCCC
Q 037916 348 AISVFGNSK 356 (741)
Q Consensus 348 ~~~~~~n~~ 356 (741)
.+++.+|+.
T Consensus 485 ~L~L~~n~~ 493 (594)
T 2p1m_B 485 KLEIRDCPF 493 (594)
T ss_dssp EEEEESCSC
T ss_pred EEECcCCCC
Confidence 666666653
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.5e-22 Score=197.04 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=95.2
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
.-+.++++++.++.+ |..+ ..+|++|++++|++.+..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|
T Consensus 8 ~~~~v~c~~~~l~~~-p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 8 SGTTVECYSQGRTSV-PTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp ETTEEECCSSCCSSC-CSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEecCCCccCC-CCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 455666666666633 2221 114555555555554444444455555555555555555444444444555555555
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCC
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVG 239 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~ 239 (741)
++|+|+++.+ ..|..+++|++|+|++|+|++..+..|..+++|+. |+|++|++++
T Consensus 84 s~n~l~~~~~------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~l~~ 138 (208)
T 2o6s_A 84 STNQLQSLPN------------------------GVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKD-LRLYQNQLKS 138 (208)
T ss_dssp CSSCCCCCCT------------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE-EECCSSCCSC
T ss_pred CCCcCCccCH------------------------hHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCE-EECCCCccce
Confidence 5555444433 34444444444455545444333334445555554 5555555554
Q ss_pred CCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCcc
Q 037916 240 SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRG 298 (741)
Q Consensus 240 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 298 (741)
..+..|..+++|++|+|++|.+.+ .+++|+.|+++.|++++.+|..++.++.
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 444445555666666666665442 3445666666777777777766665544
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=7.8e-22 Score=220.82 Aligned_cols=191 Identities=28% Similarity=0.312 Sum_probs=103.3
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
+|+.|+|++|+|++ +|..+. + +|++|+|++|+|. .+| ..+++|++|+|++|+|+++ |. |.+ +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~-~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--P-QITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--T-TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc--C-CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc--CCCEEEC
Confidence 36666666666664 333221 2 4555555555554 233 2244555555555555542 22 332 4555555
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCC
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVG 239 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~ 239 (741)
++|+|++ +|. .++ +|+.|+|++|+|++ +|. .+++|+. |+|++|+|++
T Consensus 128 s~N~l~~-lp~---~l~------------------------~L~~L~Ls~N~l~~-lp~---~l~~L~~-L~Ls~N~L~~ 174 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPA------------------------LLEYINADNNQLTM-LPE---LPTSLEV-LSVRNNQLTF 174 (571)
T ss_dssp CSSCCSC-CCC---CCT------------------------TCCEEECCSSCCSC-CCC---CCTTCCE-EECCSSCCSC
T ss_pred CCCcCCC-CCC---cCc------------------------cccEEeCCCCccCc-CCC---cCCCcCE-EECCCCCCCC
Confidence 5555543 222 344 44444555554442 333 2344444 5555555553
Q ss_pred CCChhhcCCCCCcEEEeccccccchhhhhccc-----cccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccc
Q 037916 240 SLPTEVGKLINLEILFISRNMLECEILSTLGS-----CIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIP 314 (741)
Q Consensus 240 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (741)
+|. |. ++|+.|+|++|+|+.++. |.. .+.|+.|+|++|+|+ .+|..+..+++|+.|+|++|.|++..|
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~~lp~--~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLESLPA--VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCSSCCC--CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred -cch-hh--CCCCEEECcCCCCCchhh--HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 333 33 455555555555553322 332 122388888888888 466677778889999999999988888
Q ss_pred hhhhcccc
Q 037916 315 KFLVELQL 322 (741)
Q Consensus 315 ~~~~~l~~ 322 (741)
..+..+..
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 88777654
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=6.2e-22 Score=211.53 Aligned_cols=185 Identities=25% Similarity=0.248 Sum_probs=133.9
Q ss_pred hccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCcccc-CCCCccEEEcccccccccCCccccCC
Q 037916 73 CVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIG-KFINLQTLHMWDNQLSGTISPAIGEL 151 (741)
Q Consensus 73 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l 151 (741)
|...|...-+.+++++|+|+. +|..+. ..++.|+|++|+|.+..+..|. ++++|++|+|++|+|+++.+..|.++
T Consensus 12 Cp~~C~C~~~~l~c~~~~l~~-iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 12 CPANCLCASNILSCSKQQLPN-VPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp CCTTCEEETTEEECCSSCCSS-CCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCCCEECCCEEEeCCCCcCc-cCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 444555556788899888884 454333 2678888888888777777777 88888888888888888777788888
Q ss_pred CcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccc---ccccccee
Q 037916 152 QNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQL---MDLTSLSV 228 (741)
Q Consensus 152 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~ 228 (741)
++|++|+|++|+|+.+.+..|.++++|++|+|++|+|+...|..|.++++|++|+|++|+|++..+..| ..+++|+.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 888888888888887777778888888888888888887777778888888888888888774333333 35666665
Q ss_pred EEEcCCCccCCCCChhhcCCCC--CcEEEecccccc
Q 037916 229 GLDLSRNQLVGSLPTEVGKLIN--LEILFISRNMLE 262 (741)
Q Consensus 229 ~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 262 (741)
|+|++|+|++..+..|..++. |+.|+|++|.+.
T Consensus 168 -L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 168 -LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred -EECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 777777777555556666665 366666666665
No 352
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.86 E-value=1.9e-23 Score=239.36 Aligned_cols=344 Identities=10% Similarity=0.094 Sum_probs=240.0
Q ss_pred CCCCCcccccCChhhhhCCCCCcEEEcccC-ccccc-CCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCC
Q 037916 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFN-QITGV-IPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQ 79 (741)
Q Consensus 2 dl~~n~~~~~ip~~~~~~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~ 79 (741)
||++|.+.+..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+..+.. ..+
T Consensus 111 ~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~------~~~ 184 (594)
T 2p1m_B 111 RLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD------TYT 184 (594)
T ss_dssp EEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT------TCC
T ss_pred EeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh------cCC
Confidence 567888887777777656899999999999 66543 3444457899999999999988665555554331 123
Q ss_pred CccEEECcCCcCcccCCchh----hcccccccEEEccCCcccccCCccccCCCCccEEEccccc----------------
Q 037916 80 HLKHLDINNNNFGGLLPGCI----CNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQ---------------- 139 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~----~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~---------------- 139 (741)
+|+.|+|++|. .......+ ..++ +|++|++++|.-.+.++..+..+++|++|+++.+.
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~-~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCP-NLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCT-TCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCC-CCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 59999999887 21222222 2335 89999999883323366667777788888755442
Q ss_pred ----------ccc----cCCccccCCCcCcEEEcccCCCCCcCcc-cccCCcccceeeccCcccccc-cCcccccCCCCC
Q 037916 140 ----------LSG----TISPAIGELQNLVTLAINTNKLSGNIPP-SIGNLKKLLQLYLIENFLQVS-IPSSLGQCQSLT 203 (741)
Q Consensus 140 ----------i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~ 203 (741)
+.. ..+..+..+++|++|+|++|.+++.... .+..+++|++|++++| +... ++.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 111 1233334678999999999998753322 3568899999999998 4422 333344689999
Q ss_pred EEec---------cCccccccCCcccc-ccccceeEEEcCCCccCCCCChhhc-CCCCCcEEEec--c----ccccc---
Q 037916 204 TINL---------SYNNLSGTIPPQLM-DLTSLSVGLDLSRNQLVGSLPTEVG-KLINLEILFIS--R----NMLEC--- 263 (741)
Q Consensus 204 ~L~L---------~~N~l~~~~p~~~~-~l~~L~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~--- 263 (741)
+|++ +.|.+++.....+. ++++|+. |+++.|.+++.....+. .+++|+.|+|+ + |.++.
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~-L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~ 420 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES-VLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE-EEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCT
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHH-HHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCch
Confidence 9998 34556543333333 4788887 99999998865555554 58999999999 4 56662
Q ss_pred --hhhhhccccccccEEEeCCCccCCCCChhccc-CccCCeeeCCCCcCCCccchhh-hccccCCcccccCcccccccCC
Q 037916 264 --EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSS-LRGLRVLDLSQNNISGEIPKFL-VELQLVQNLNLSYNDLEGVIPT 339 (741)
Q Consensus 264 --~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~ 339 (741)
..+..+..+++|+.|+|++ .+++.....+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|+++.....
T Consensus 421 ~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~ 499 (594)
T 2p1m_B 421 DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL 499 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH
T ss_pred hhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH
Confidence 2233467889999999987 666555555555 8899999999999986555555 6789999999999999654332
Q ss_pred --ccccCCcccccccCCCC
Q 037916 340 --EGVFKNASAISVFGNSK 356 (741)
Q Consensus 340 --~~~~~~~~~~~~~~n~~ 356 (741)
...+++++.+++.+|+.
T Consensus 500 ~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 500 ANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HTGGGGGGSSEEEEESSCC
T ss_pred HHHHhCCCCCEEeeeCCCC
Confidence 23467899999988864
No 353
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.3e-22 Score=206.40 Aligned_cols=131 Identities=19% Similarity=0.149 Sum_probs=105.6
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC------------------cchhHHHHHHHHHhcCCCceeeEe
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG------------------ASKSSIAECSALRNIRHKNLVKIL 463 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~hpnIv~~~ 463 (741)
|.+.+.||+|+||.||+|.+ .+++.||+|+++..... ....+.+|+.++++++| +++.
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~ 167 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVP 167 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSC
T ss_pred EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcC
Confidence 44558999999999999999 68999999999642211 23457899999999984 5555
Q ss_pred eeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 037916 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKP 543 (741)
Q Consensus 464 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp 543 (741)
+++. .+..|+||||++|++|.+ +.. .....++.|++.||.|||+. ||+||||||
T Consensus 168 ~~~~------~~~~~lvmE~~~g~~L~~-l~~----------------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp 221 (282)
T 1zar_A 168 KVYA------WEGNAVLMELIDAKELYR-VRV----------------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQ 221 (282)
T ss_dssp CEEE------EETTEEEEECCCCEEGGG-CCC----------------SCHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred eEEe------ccceEEEEEecCCCcHHH-cch----------------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCH
Confidence 5421 135699999999999998 431 12346999999999999999 999999999
Q ss_pred CCeEeCCCCceEEeeccccc
Q 037916 544 SNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 544 ~NIll~~~~~~kL~DFg~a~ 563 (741)
+|||++ ++.+||+|||+|.
T Consensus 222 ~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 222 YNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp TSEEEE-TTEEEECCCTTCE
T ss_pred HHEEEE-CCcEEEEECCCCe
Confidence 999999 9999999999986
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.1e-21 Score=219.69 Aligned_cols=189 Identities=22% Similarity=0.285 Sum_probs=144.1
Q ss_pred CCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCcccc
Q 037916 46 KLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIG 125 (741)
Q Consensus 46 ~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~ 125 (741)
+|+.|+|++|+|++ +|..+. + +|++|+|++|+|+ .+| ..+. +|++|+|++|+|++ +|. |.
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~----------~L~~L~Ls~N~l~-~ip---~~l~-~L~~L~Ls~N~l~~-ip~-l~ 119 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--P----------QITVLEITQNALI-SLP---ELPA-SLEYLDACDNRLST-LPE-LP 119 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--T----------TCSEEECCSSCCS-CCC---CCCT-TCCEEECCSSCCSC-CCC-CC
T ss_pred CccEEEeCCCCCCc-cCHhHc--C----------CCCEEECcCCCCc-ccc---cccC-CCCEEEccCCCCCC-cch-hh
Confidence 78888888888875 554442 2 3888888888887 344 2233 78888888888866 454 65
Q ss_pred CCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEE
Q 037916 126 KFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTI 205 (741)
Q Consensus 126 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 205 (741)
+ +|++|+|++|+|+++.+ .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|
T Consensus 120 ~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L 185 (571)
T 3cvr_A 120 A--SLKHLDVDNNQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL 185 (571)
T ss_dssp T--TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE
T ss_pred c--CCCEEECCCCcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE
Confidence 5 88888888888887443 57888888888888886 444 56788888888888886 555 65 889999
Q ss_pred eccCccccccCCccccccccc-------eeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhcccccc
Q 037916 206 NLSYNNLSGTIPPQLMDLTSL-------SVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIK 274 (741)
Q Consensus 206 ~L~~N~l~~~~p~~~~~l~~L-------~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 274 (741)
+|++|+|+ .+|. |.. +| +. |+|++|+|+ .+|..+..+++|+.|+|++|.|++..|..+..++.
T Consensus 186 ~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~-L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 186 DVSTNLLE-SLPA-VPV--RNHHSEETEIF-FRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ECCSSCCS-SCCC-CC----------CCEE-EECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred ECcCCCCC-chhh-HHH--hhhcccccceE-EecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 99999998 6776 554 66 77 999999999 57777778999999999999999999998887654
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.1e-21 Score=209.50 Aligned_cols=176 Identities=21% Similarity=0.210 Sum_probs=131.5
Q ss_pred cEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhh-hhhhhhhccccCCCccEEECcCCcCcccCCchhhcc
Q 037916 24 LFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFG-KATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNF 102 (741)
Q Consensus 24 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l 102 (741)
+.+++++|+|+. +|..+. ..+++|+|++|+|++..+..|. ++++ |++|+|++|+|+++.+..|..+
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~----------L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTN----------LHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTT----------CCEEECCSSCCCEECTTTTTTC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccc----------cCEEECCCCcCCccChhhccCC
Confidence 567777777773 454443 3577777777777766666665 6654 7777777777777777777777
Q ss_pred cccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccc---cCCcccc
Q 037916 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI---GNLKKLL 179 (741)
Q Consensus 103 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~ 179 (741)
. +|++|+|++|+|..+.+..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++|+|+++.+..| ..+++|+
T Consensus 88 ~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 P-NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM 166 (361)
T ss_dssp T-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCC
T ss_pred C-CCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCC
Confidence 7 78888888888777777778888888888888888887778888888888888888888886655555 5678888
Q ss_pred eeeccCcccccccCcccccCCC--CCEEeccCcccc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQS--LTTINLSYNNLS 213 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~--L~~L~L~~N~l~ 213 (741)
.|+|++|+|+...+..|..++. |+.|+|++|.+.
T Consensus 167 ~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 167 LLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp EEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred EEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 8888888888766677777776 478888888886
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=194.01 Aligned_cols=153 Identities=21% Similarity=0.226 Sum_probs=98.2
Q ss_pred cEEEcccCCCCCcCcccccCCcccceeeccCcccccccC-cccccCCCCCEEeccCccccccCCccccccccceeEEEcC
Q 037916 155 VTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIP-SSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLS 233 (741)
Q Consensus 155 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls 233 (741)
+.+++++|.++. +|..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|.++++|+. |+|+
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~-L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE-ILLT 89 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE-EECC
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE-EECC
Confidence 477777887774 454443 345677777777776543 44667777777777777777655556666666665 6666
Q ss_pred CCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCC
Q 037916 234 RNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 234 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
+|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+.+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 666666666666666666666666666666656666666666666666666665556666666666666666666554
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=1.7e-21 Score=192.53 Aligned_cols=153 Identities=24% Similarity=0.336 Sum_probs=113.2
Q ss_pred cEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCC
Q 037916 155 VTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSR 234 (741)
Q Consensus 155 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~ 234 (741)
+.+++++|.++. +|..+. ++|+.|+|++|.|+++.+..|..+++|++|+|++|+|++..|..|.++++|+. |+|++
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~-L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS-LVLYG 89 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCE-EECCS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCE-EECCC
Confidence 578888888874 455443 57888888888888777777888888888888888887777777777777776 77777
Q ss_pred CccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCC
Q 037916 235 NQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 235 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
|+|+...+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 77776666667777777777777777777777777777777777777777776666667777777777777776653
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=3.8e-21 Score=190.06 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=85.0
Q ss_pred hccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCC-ccccCCCCccEEEcccccccccCCccccCC
Q 037916 73 CVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIP-AGIGKFINLQTLHMWDNQLSGTISPAIGEL 151 (741)
Q Consensus 73 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 151 (741)
|...|...-+.+++++|.++. +|..+.. .+++|+|++|+|.+..+ ..|..+++|++|+|++|+|+++.+..|.++
T Consensus 5 CP~~C~C~~~~l~~s~n~l~~-iP~~~~~---~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 80 (220)
T 2v70_A 5 CPEKCRCEGTTVDCSNQKLNK-IPEHIPQ---YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 80 (220)
T ss_dssp CCTTCEEETTEEECCSSCCSS-CCSCCCT---TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCCCEECCCEeEeCCCCccc-CccCCCC---CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC
Confidence 344454456677777777774 3433222 45566666666655533 335555566666666666655555555555
Q ss_pred CcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEE
Q 037916 152 QNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLD 231 (741)
Q Consensus 152 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~ 231 (741)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+. |+
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~ 159 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST-LN 159 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE-EE
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE-EE
Confidence 55555555555555555555555555555555555555444455555555555555555444433444444444443 44
Q ss_pred cCCCccC
Q 037916 232 LSRNQLV 238 (741)
Q Consensus 232 Ls~N~l~ 238 (741)
|++|.+.
T Consensus 160 L~~N~l~ 166 (220)
T 2v70_A 160 LLANPFN 166 (220)
T ss_dssp CCSCCEE
T ss_pred ecCcCCc
Confidence 4444433
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=7e-21 Score=196.78 Aligned_cols=169 Identities=21% Similarity=0.325 Sum_probs=83.2
Q ss_pred CCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchh
Q 037916 20 LPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCI 99 (741)
Q Consensus 20 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 99 (741)
+++|++|++++|.|+.+ + .+..+++|++|+|++|++++..+ +..+++ |++|+|++|++++. + .+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~----------L~~L~l~~n~l~~~-~-~l 108 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKN----------LGWLFLDENKVKDL-S-SL 108 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTT----------CCEEECCSSCCCCG-G-GG
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCC----------CCEEECCCCcCCCC-h-hh
Confidence 45555555555555533 2 25555555555555555554322 444443 55555555555532 1 24
Q ss_pred hcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccc
Q 037916 100 CNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLL 179 (741)
Q Consensus 100 ~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 179 (741)
..+. +|++|+|++|++... ..+..+++|++|+|++|+|+++ ..+..+++|++|+|++|+|++..+ +..+++|+
T Consensus 109 ~~l~-~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 181 (291)
T 1h6t_A 109 KDLK-KLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181 (291)
T ss_dssp TTCT-TCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred ccCC-CCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccC
Confidence 4444 555555555555332 3344555555555555555443 344455555555555555543332 44555555
Q ss_pred eeeccCcccccccCcccccCCCCCEEeccCcccc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLS 213 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 213 (741)
+|+|++|.|+.. + .+..+++|+.|++++|+++
T Consensus 182 ~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 182 NLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp EEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred EEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 555555555432 2 2444555555555555544
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=3.5e-21 Score=199.08 Aligned_cols=166 Identities=25% Similarity=0.348 Sum_probs=80.4
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcc
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAIN 160 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 160 (741)
+..+.+..+.+++..+ +..+. +|+.|++++|.+... ..+..+++|++|+|++|+|+++.+ +.++++|++|+|+
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~-~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELN-SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHH-TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHhcCCCcccccc--hhhcC-cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 3344455555543322 12333 555666666555433 235555666666666666654433 5556666666666
Q ss_pred cCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCC
Q 037916 161 TNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240 (741)
Q Consensus 161 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~ 240 (741)
+|++++. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|+. |+|++|+|++.
T Consensus 99 ~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~-L~L~~N~l~~~ 171 (291)
T 1h6t_A 99 ENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT-LSLEDNQISDI 171 (291)
T ss_dssp SSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE-EECCSSCCCCC
T ss_pred CCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE-EEccCCccccc
Confidence 6665532 2255555555555555555432 2344455555555555555422 33444444443 44444444432
Q ss_pred CChhhcCCCCCcEEEecccccc
Q 037916 241 LPTEVGKLINLEILFISRNMLE 262 (741)
Q Consensus 241 ~p~~~~~l~~L~~L~Ls~N~l~ 262 (741)
.+ +..+++|+.|+|++|.|+
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCC
T ss_pred hh--hcCCCccCEEECCCCcCC
Confidence 22 444444444444444444
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=8.2e-21 Score=187.64 Aligned_cols=161 Identities=19% Similarity=0.262 Sum_probs=85.8
Q ss_pred ccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCc
Q 037916 74 VQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQN 153 (741)
Q Consensus 74 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 153 (741)
...|...-+.+++++|.++. +|..+. .+|+.|+|++|+|..+.+..|..+++|++|+|++|+|+++.+..|.++++
T Consensus 6 P~~C~C~~~~v~c~~~~l~~-iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 81 (220)
T 2v9t_B 6 PAACTCSNNIVDCRGKGLTE-IPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81 (220)
T ss_dssp CTTSEEETTEEECTTSCCSS-CCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSS
T ss_pred CCCCEECCCEEEcCCCCcCc-CCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcC
Confidence 33444445677777777763 333222 25555555555555555555555555555555555555555555555555
Q ss_pred CcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcC
Q 037916 154 LVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLS 233 (741)
Q Consensus 154 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls 233 (741)
|++|+|++|+|+.+.+..|.+ +++|++|+|++|+|++..|..|.++++|+. |+|+
T Consensus 82 L~~L~Ls~N~l~~l~~~~f~~------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~ 136 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSLFEG------------------------LFSLQLLLLNANKINCLRVDAFQDLHNLNL-LSLY 136 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTT------------------------CTTCCEEECCSSCCCCCCTTTTTTCTTCCE-EECC
T ss_pred CCEEECCCCcCCccCHhHccC------------------------CCCCCEEECCCCCCCEeCHHHcCCCCCCCE-EECC
Confidence 555555555555444444444 444445555555554444444555555554 5555
Q ss_pred CCccCCCCChhhcCCCCCcEEEeccccccc
Q 037916 234 RNQLVGSLPTEVGKLINLEILFISRNMLEC 263 (741)
Q Consensus 234 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 263 (741)
+|+|++..+..|..+++|+.|+|++|.+..
T Consensus 137 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 137 DNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 555555555555666666666666666653
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=1.4e-21 Score=221.28 Aligned_cols=168 Identities=20% Similarity=0.290 Sum_probs=81.2
Q ss_pred CCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhh
Q 037916 21 PNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCIC 100 (741)
Q Consensus 21 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 100 (741)
.++..++|+.+.++++.+ +..|++|+.|+|++|.|+.. + .|..+++ |+.|+|++|+|++..+ +.
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~----------L~~L~Ls~N~l~~~~~--l~ 84 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPN----------VTKLFLNGNKLTDIKP--LT 84 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTT----------CCEEECTTSCCCCCGG--GG
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCC----------CCEEEeeCCCCCCChh--hc
Confidence 334455555555554432 34555566666666665532 2 3444443 5566666655554433 44
Q ss_pred cccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccce
Q 037916 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQ 180 (741)
Q Consensus 101 ~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 180 (741)
.+. +|+.|+|++|.|... ..+..+++|++|+|++|+|+++ ..|..+++|+.|+|++|+|+++ ..|..+++|+.
T Consensus 85 ~l~-~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 157 (605)
T 1m9s_A 85 NLK-NLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 157 (605)
T ss_dssp GCT-TCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSE
T ss_pred cCC-CCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCE
Confidence 444 555555555555331 2445555555555555555532 2344555555555555555433 33444444444
Q ss_pred eeccCcccccccCcccccCCCCCEEeccCcccc
Q 037916 181 LYLIENFLQVSIPSSLGQCQSLTTINLSYNNLS 213 (741)
Q Consensus 181 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 213 (741)
|+|++|.|++..| +..+++|+.|+|++|+|+
T Consensus 158 L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 158 LSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 4444444443333 444444444444444443
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=1.4e-20 Score=213.08 Aligned_cols=192 Identities=19% Similarity=0.290 Sum_probs=163.7
Q ss_pred CCCCcccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCcc
Q 037916 3 VGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLK 82 (741)
Q Consensus 3 l~~n~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~ 82 (741)
|+.+.+...++.. .|++|+.|+|++|.|+.+ + .|..+++|+.|+|++|+|++..| |..+++ |+
T Consensus 28 l~~~~i~~~~~~~---~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~----------L~ 90 (605)
T 1m9s_A 28 LKKKSVTDAVTQN---ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKN----------LG 90 (605)
T ss_dssp TTCSCTTSEECHH---HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTT----------CC
T ss_pred ccCCCcccccchh---cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCC----------CC
Confidence 5667777665543 579999999999999864 3 58999999999999999996654 777765 99
Q ss_pred EEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccC
Q 037916 83 HLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTN 162 (741)
Q Consensus 83 ~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 162 (741)
.|+|++|+|++. | .+..+. +|+.|+|++|+|... ..+..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|
T Consensus 91 ~L~Ls~N~l~~l-~-~l~~l~-~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N 163 (605)
T 1m9s_A 91 WLFLDENKIKDL-S-SLKDLK-KLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN 163 (605)
T ss_dssp EEECCSSCCCCC-T-TSTTCT-TCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSS
T ss_pred EEECcCCCCCCC-h-hhccCC-CCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCC
Confidence 999999999964 3 678888 999999999999764 5699999999999999999976 78999999999999999
Q ss_pred CCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccc
Q 037916 163 KLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMD 222 (741)
Q Consensus 163 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 222 (741)
+|++..| |..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.....+..
T Consensus 164 ~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 164 QISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred cCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 9997766 99999999999999999964 46899999999999999998543333333
No 364
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=1.2e-20 Score=198.96 Aligned_cols=286 Identities=12% Similarity=0.037 Sum_probs=173.4
Q ss_pred CCCCcEEEcccCcccccCCccCCC-CCCCcEEEeecCcCc--ccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCC
Q 037916 20 LPNLLFLSLGFNQITGVIPSSMFN-ASKLEVFQVTSNNLT--GEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLP 96 (741)
Q Consensus 20 l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~N~l~--~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 96 (741)
+++++.|.++++ +....-..+.. +++|++|||++|+|+ ...+..+.. ++.+.+..|. +.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~-------------~~~~~~~~~~---I~~ 86 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN-------------GKFYIYMANF---VPA 86 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG-------------GCCEEECTTE---ECT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc-------------cccccccccc---cCH
Confidence 366788888765 32222223333 677888888888877 333222221 3444444553 344
Q ss_pred chhhc--------ccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCC----C
Q 037916 97 GCICN--------FSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNK----L 164 (741)
Q Consensus 97 ~~~~~--------l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~----l 164 (741)
.+|.+ +. +|+.|+|.+ ++..+.+.+|.++++|++|+|++|.++.+.+.+|.++.++..+.+..+. .
T Consensus 87 ~aF~~~~~~~~~g~~-~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQ-TLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTEEEETTEEEECT-TCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHhcccccccccccC-CCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 55655 66 777777777 6666677777777777777777777776777777776666666655522 2
Q ss_pred CCcCcccccCCcccc-eeeccCcc-cccccCcccccCCCCCEEeccCccccccCCccc-cccccceeEEEcCCCccCCCC
Q 037916 165 SGNIPPSIGNLKKLL-QLYLIENF-LQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQL-MDLTSLSVGLDLSRNQLVGSL 241 (741)
Q Consensus 165 ~~~~~~~~~~l~~L~-~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~~L~Ls~N~l~~~~ 241 (741)
..+...+|.++.+|+ .+.+.... +.......-....+++.+.+.++-.. .....+ ..+++|+. |+|++|+++.+.
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~-l~L~~n~i~~I~ 242 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVS-LDISKTNATTIP 242 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCE-EECTTBCCCEEC
T ss_pred ccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeE-EECCCCCcceec
Confidence 333444555555555 33333221 10000000011234445554443211 111111 12567776 888887777666
Q ss_pred ChhhcCCCCCcEEEeccccccchhhhhcccccccc-EEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhcc
Q 037916 242 PTEVGKLINLEILFISRNMLECEILSTLGSCIKLE-QLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVEL 320 (741)
Q Consensus 242 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 320 (741)
+..|.++++|+.|+|++| ++.+...+|.++++|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++.+.+.+|.++
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred HhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 777888888888888877 7777778888888887 888877 6766777788888888888888888877777788888
Q ss_pred ccCCcccc
Q 037916 321 QLVQNLNL 328 (741)
Q Consensus 321 ~~L~~L~l 328 (741)
++|+.++.
T Consensus 321 ~~L~~ly~ 328 (329)
T 3sb4_A 321 VPSKLIYK 328 (329)
T ss_dssp CCCCEEEC
T ss_pred cchhhhcc
Confidence 88877653
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=5.4e-23 Score=231.52 Aligned_cols=204 Identities=19% Similarity=0.158 Sum_probs=151.8
Q ss_pred CCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc-------------CcccCCchhhcccccccE
Q 037916 42 FNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN-------------FGGLLPGCICNFSITLET 108 (741)
Q Consensus 42 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~~L~~ 108 (741)
...++|+.|+|++|+|+ .+|..++.+++ |+.|++++|. +.+..|..+..+. +|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~----------L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~-~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKE----------LQELEPENKWCLLTIILLMRALDPLLYEKETLQYFS-TLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHH----------HHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHH-HHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHH----------HHHhccccchhhhhHHHHHHhcccccCCHHHHHHHH-hccc
Confidence 45677788888888887 66777777776 7777776664 4455566666666 6666
Q ss_pred EE-ccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcc
Q 037916 109 LI-FNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENF 187 (741)
Q Consensus 109 L~-L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 187 (741)
|+ ++.|.+ .+|+.+.+++|.|+.+.+. .|+.|+|++|+|++ +|. |+.+++|+.|+|++|.
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 66 555543 2455666667776654332 47888888888885 454 8888888888888888
Q ss_pred cccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCC-ChhhcCCCCCcEEEeccccccchhh
Q 037916 188 LQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL-PTEVGKLINLEILFISRNMLECEIL 266 (741)
Q Consensus 188 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~ 266 (741)
|+ .+|..|+.+++|++|+|++|+|++ +| .+.++++|+. |+|++|+|++.. |..|+.+++|+.|+|++|.|++.++
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~-L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQE-LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCE-EECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcE-EECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 88 677888888888888888888884 66 7888888887 888888888776 8888888888888888888887654
Q ss_pred h---hccccccccEEEe
Q 037916 267 S---TLGSCIKLEQLKL 280 (741)
Q Consensus 267 ~---~~~~l~~L~~L~L 280 (741)
. .+..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 3 3445788888864
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.3e-19 Score=180.19 Aligned_cols=132 Identities=26% Similarity=0.278 Sum_probs=65.4
Q ss_pred CccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEecc
Q 037916 129 NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS 208 (741)
Q Consensus 129 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 208 (741)
+|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 120 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEecc
Confidence 44444444444444444444444444444554444444434444444445555555554444444444455555555555
Q ss_pred CccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecccccc
Q 037916 209 YNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLE 262 (741)
Q Consensus 209 ~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 262 (741)
+|+|+ .+|..+..+++|+. |+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 121 ~N~l~-~lp~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 121 CNKLT-ELPRGIERLTHLTH-LALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SSCCC-SCCTTGGGCTTCSE-EECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCccc-ccCcccccCCCCCE-EECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 55554 44444555555554 555555555444444555555555555555544
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.1e-19 Score=180.72 Aligned_cols=152 Identities=22% Similarity=0.332 Sum_probs=94.9
Q ss_pred cEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhccc
Q 037916 24 LFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFS 103 (741)
Q Consensus 24 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 103 (741)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|..+++ |++|+|++|+|+++.+..|..+.
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~----------L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLIN----------LKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTT----------CCEEECCSSCCCCCCTTTTTTCT
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccC----------CcEEECCCCCCCCcChhhcccCC
Confidence 45666666665 3333332 56666666666666555666666554 66666666666655555555555
Q ss_pred ccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeec
Q 037916 104 ITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYL 183 (741)
Q Consensus 104 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 183 (741)
+|+.|+|++|+|.+..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|+|
T Consensus 89 -~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 166 (229)
T 3e6j_A 89 -QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166 (229)
T ss_dssp -TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred -CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 6666666666666665666666666777777777666 34555666667777777777776655566666677777777
Q ss_pred cCccccc
Q 037916 184 IENFLQV 190 (741)
Q Consensus 184 ~~N~i~~ 190 (741)
++|.+..
T Consensus 167 ~~N~~~c 173 (229)
T 3e6j_A 167 FGNPWDC 173 (229)
T ss_dssp TTSCBCT
T ss_pred eCCCccC
Confidence 7776653
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=4.4e-22 Score=224.08 Aligned_cols=200 Identities=23% Similarity=0.231 Sum_probs=160.6
Q ss_pred CccEEECcCCcCcccCCchhhcccccccEEEccCCc-------------ccccCCccccCCCCccEEE-cccccccccCC
Q 037916 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNK-------------IFRSIPAGIGKFINLQTLH-MWDNQLSGTIS 145 (741)
Q Consensus 80 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~-------------i~~~~~~~~~~l~~L~~L~-L~~N~i~~~~~ 145 (741)
+|+.|+|++|+|+ .+|..+..+. +|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~---- 423 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD---- 423 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH----
T ss_pred cceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc----
Confidence 5999999999998 6788888888 89999997765 3455566666677777776 5665442
Q ss_pred ccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccccccc
Q 037916 146 PAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTS 225 (741)
Q Consensus 146 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 225 (741)
+|..+.+++|.|+.+.+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|+|+ .+|..|.++++
T Consensus 424 -------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 487 (567)
T 1dce_A 424 -------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRC 487 (567)
T ss_dssp -------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred -------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCC
Confidence 45556667777764322 248899999999986 565 899999999999999998 88999999999
Q ss_pred ceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchh-hhhccccccccEEEeCCCccCCCCCh---hcccCccCCe
Q 037916 226 LSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEI-LSTLGSCIKLEQLKLGGNLFQGPIPL---SLSSLRGLRV 301 (741)
Q Consensus 226 L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~ 301 (741)
|+. |+|++|+|++ +| .|+.+++|+.|+|++|+|+++. |..|+.+++|+.|+|++|++++.+|. .+..+++|+.
T Consensus 488 L~~-L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~ 564 (567)
T 1dce_A 488 LEV-LQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564 (567)
T ss_dssp CCE-EECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred CCE-EECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCc
Confidence 997 9999999996 56 8999999999999999999887 88999999999999999999876553 2445889998
Q ss_pred eeC
Q 037916 302 LDL 304 (741)
Q Consensus 302 L~L 304 (741)
|+|
T Consensus 565 L~l 567 (567)
T 1dce_A 565 ILT 567 (567)
T ss_dssp EEC
T ss_pred cCC
Confidence 875
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=1.7e-20 Score=217.75 Aligned_cols=192 Identities=24% Similarity=0.269 Sum_probs=113.8
Q ss_pred EEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccc
Q 037916 133 LHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNL 212 (741)
Q Consensus 133 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 212 (741)
++++.|++. +.+..|..+++|+.|+|++|+|. .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|++|+|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 355566665 66777888888888888888887 55656667888888888888888 6778888888888888888888
Q ss_pred cccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhcccccc-ccEEEeCCCccCCCCCh
Q 037916 213 SGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIK-LEQLKLGGNLFQGPIPL 291 (741)
Q Consensus 213 ~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 291 (741)
+ .+|..|.++++|+. |+|++|.|+ .+|..|+.+++|++|+|++|.|++.++..+..+.. +..|+|++|.+++.+|.
T Consensus 283 ~-~lp~~~~~l~~L~~-L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKY-FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp S-SCCSSGGGGTTCSE-EECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCE-EECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 8 77888888888887 888888887 56767888888888888888888888887766532 33578889998887775
Q ss_pred hcccCccCCeeeCCCC--------cCCCccchhhhccccCCcccccCcccccc
Q 037916 292 SLSSLRGLRVLDLSQN--------NISGEIPKFLVELQLVQNLNLSYNDLEGV 336 (741)
Q Consensus 292 ~~~~l~~L~~L~Ls~N--------~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 336 (741)
.|+.|++++| .|.+..+..+..+..+....+++|-+...
T Consensus 360 ------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 360 ------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp ------C-----------------------------------------CCCGG
T ss_pred ------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 4556667766 44444455556666667777777777643
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=1.2e-20 Score=198.89 Aligned_cols=272 Identities=14% Similarity=0.082 Sum_probs=201.7
Q ss_pred CCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCc--ccCCchhhcccccccEEEccCCcccccCC
Q 037916 44 ASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFG--GLLPGCICNFSITLETLIFNSNKIFRSIP 121 (741)
Q Consensus 44 l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~--~~~~~~~~~l~~~L~~L~L~~n~i~~~~~ 121 (741)
+.+|+.|.++++ +. ...+..+.. ...+|+.|||++|+|. ...+..+ . .+..+.+..|. +.+
T Consensus 24 ~~~l~~L~l~g~-i~---~~~~~~l~~------~l~~L~~LdLs~n~i~~~~~~~~~~---~-~~~~~~~~~~~---I~~ 86 (329)
T 3sb4_A 24 ANSITHLTLTGK-LN---AEDFRHLRD------EFPSLKVLDISNAEIKMYSGKAGTY---P-NGKFYIYMANF---VPA 86 (329)
T ss_dssp HHHCSEEEEEEE-EC---HHHHHHHHH------SCTTCCEEEEEEEEECCEEESSSSS---G-GGCCEEECTTE---ECT
T ss_pred hCceeEEEEecc-cc---HHHHHHHHH------hhccCeEEecCcceeEEecCccccc---c-ccccccccccc---cCH
Confidence 667999999875 22 122333322 1245999999999998 3333222 2 24556666663 456
Q ss_pred ccccC--------CCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcc----cc
Q 037916 122 AGIGK--------FINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENF----LQ 189 (741)
Q Consensus 122 ~~~~~--------l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----i~ 189 (741)
.+|.+ +++|++|+|.+ .++.+...+|.++++|+.|++++|.+..+.+.+|.+..++..+.+..+. ..
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 77888 99999999999 8888999999999999999999999988888999998888888777642 23
Q ss_pred cccCcccccCCCCC-EEeccCccccccCCccc----cccccceeEEEcCCCccCCCCChhh-cCCCCCcEEEeccccccc
Q 037916 190 VSIPSSLGQCQSLT-TINLSYNNLSGTIPPQL----MDLTSLSVGLDLSRNQLVGSLPTEV-GKLINLEILFISRNMLEC 263 (741)
Q Consensus 190 ~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~----~~l~~L~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 263 (741)
.....+|.++.+|+ .+.+.... .++..+ ....++.. +.+.++-.. .....+ ..+++|+.|+|++|+++.
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~-l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~ 240 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINF-LTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATT 240 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSE-EEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCE
T ss_pred cccccccccccccceeEEecCCC---cHHHHHhhcccCccccce-EEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcce
Confidence 34456677777777 55554431 122211 12344444 555554222 111122 248999999999999999
Q ss_pred hhhhhccccccccEEEeCCCccCCCCChhcccCccCC-eeeCCCCcCCCccchhhhccccCCcccccCcccccccCCc
Q 037916 264 EILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLR-VLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTE 340 (741)
Q Consensus 264 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 340 (741)
+...+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .++|.+ .++.+.+.+|.++++|+.|++++|.++.+.+..
T Consensus 241 I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~a 316 (329)
T 3sb4_A 241 IPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDEL 316 (329)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTT
T ss_pred ecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhh
Confidence 99999999999999999998 8888999999999999 999998 788788899999999999999999999887654
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=3.1e-20 Score=188.79 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=34.7
Q ss_pred ccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcc
Q 037916 81 LKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAIN 160 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 160 (741)
++.+++++|.+++.. .+..+. +|+.|++++|+|... + .+..+++|++|+|++|+|+++.+ |.++++|++|+|+
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~-~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELS-GVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHT-TCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHhcCCCccccc--chhhcC-cCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 444455555554332 233343 444444444444322 2 34444444444444444443332 4444444444444
Q ss_pred cCCCC
Q 037916 161 TNKLS 165 (741)
Q Consensus 161 ~N~l~ 165 (741)
+|+++
T Consensus 94 ~N~l~ 98 (263)
T 1xeu_A 94 RNRLK 98 (263)
T ss_dssp SSCCS
T ss_pred CCccC
Confidence 44444
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=2.7e-20 Score=189.33 Aligned_cols=166 Identities=23% Similarity=0.272 Sum_probs=75.6
Q ss_pred ccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccC
Q 037916 130 LQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY 209 (741)
Q Consensus 130 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 209 (741)
+..+++++|.++++. .+..+++|++|++++|+|+.+ + .+..+++|++|+|++|+|++..+ |..+++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 334444444444322 234444444444444444422 2 34444444444444444443322 44444444444444
Q ss_pred ccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCC
Q 037916 210 NNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPI 289 (741)
Q Consensus 210 N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 289 (741)
|++++ +|.... ++|+. |+|++|+|++. + .+..+++|+.|+|++|+|+++. .+..+++|+.|+|++|++++.
T Consensus 95 N~l~~-l~~~~~--~~L~~-L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 95 NRLKN-LNGIPS--ACLSR-LFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SCCSC-CTTCCC--SSCCE-EECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC-
T ss_pred CccCC-cCcccc--CcccE-EEccCCccCCC-h-hhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch-
Confidence 44442 222111 44444 55555555432 2 3455555555555555555431 345555555555555555543
Q ss_pred ChhcccCccCCeeeCCCCcCCC
Q 037916 290 PLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 290 ~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
..+..+++|+.|+|++|.+++
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEEC
T ss_pred -HHhccCCCCCEEeCCCCcccC
Confidence 345555555555555555553
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=2.7e-19 Score=173.62 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=45.1
Q ss_pred CCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEe
Q 037916 127 FINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTIN 206 (741)
Q Consensus 127 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 206 (741)
+++|++|++++|.|+.+. .+..+++|++|++++|.++. +..|..+++|++|++++|.+++..+..|..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344444444444444222 34444444444444444431 12344444444444444444443444444444444444
Q ss_pred ccCccccccCCccccccccceeEEEcCCCc
Q 037916 207 LSYNNLSGTIPPQLMDLTSLSVGLDLSRNQ 236 (741)
Q Consensus 207 L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~ 236 (741)
|++|++++..|..+..+++|+. |++++|.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~-L~L~~n~ 147 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNS-IDLSYNG 147 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCE-EECCSCT
T ss_pred ecCCccCcHhHHHHhhCCCCCE-EEccCCC
Confidence 4444444333333444444443 4444443
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=2.3e-20 Score=216.71 Aligned_cols=190 Identities=21% Similarity=0.245 Sum_probs=68.4
Q ss_pred cCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCccccc
Q 037916 94 LLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIG 173 (741)
Q Consensus 94 ~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 173 (741)
..+..|..+. .|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|.
T Consensus 215 ~~~~~~~~l~-~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 290 (727)
T 4b8c_D 215 MPKDSKYDDQ-LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG 290 (727)
T ss_dssp -------CCC-CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG
T ss_pred cChhhhccCC-CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhc
Confidence 3344444444 4555555555543 33333444555555555555555 33444555555555555555555 3344555
Q ss_pred CCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcE
Q 037916 174 NLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEI 253 (741)
Q Consensus 174 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~ 253 (741)
++++|++|+|++|.|+ .+|..|..+++|++|+|++|+|++.+|..+..+......|+|++|.+++.+|. .|+.
T Consensus 291 ~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~ 363 (727)
T 4b8c_D 291 SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRF 363 (727)
T ss_dssp GGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---
T ss_pred CCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccce
Confidence 5555555555555554 33444555555555555555555444444443322111144555555544442 2333
Q ss_pred EEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCC
Q 037916 254 LFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNIS 310 (741)
Q Consensus 254 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 310 (741)
|+++.|... . ...+.+.+..+..+..+..+....++.|-+.
T Consensus 364 l~l~~n~~~---~-------------~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 364 IEINTDGEP---Q-------------REYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------------------------------CCC
T ss_pred eEeeccccc---c-------------cccCCccccccchhhcccccceeeeeccccc
Confidence 334433100 0 0011334444445556666667777777665
No 375
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.78 E-value=4.5e-18 Score=183.10 Aligned_cols=267 Identities=11% Similarity=0.103 Sum_probs=193.5
Q ss_pred CCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCcc
Q 037916 44 ASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG 123 (741)
Q Consensus 44 l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~ 123 (741)
...++.+.+.+ .++.+...+|.+. + |+.++|.+| ++.+...+|.+ . +|+.+.+.. .+..+.+.+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~----------L~~i~l~~~-i~~I~~~aF~~-~-~L~~i~lp~-~l~~I~~~a 175 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-Q----------IAKVVLNEG-LKSIGDMAFFN-S-TVQEIVFPS-TLEQLKEDI 175 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-C----------CSEEECCTT-CCEECTTTTTT-C-CCCEEECCT-TCCEECSST
T ss_pred cCCccEEEECC-ccCEehHhhcccC-C----------ccEEEeCCC-ccEECHHhcCC-C-CceEEEeCC-CccEehHHH
Confidence 45666666643 4554555556542 2 777777655 66666666666 2 577777765 566667777
Q ss_pred ccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCC
Q 037916 124 IGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLT 203 (741)
Q Consensus 124 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 203 (741)
|.++++|+.++|++|+++.+...+|. ..+|+.+.|.+| ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+
T Consensus 176 F~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~ 251 (401)
T 4fdw_A 176 FYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGIT 251 (401)
T ss_dssp TTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCS
T ss_pred hhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCcc
Confidence 77777777777777777777777776 467777777744 66677777777777777777765 55566677776 6777
Q ss_pred EEeccCccccccCCccccccccceeEEEcCCCccC-----CCCChhhcCCCCCcEEEeccccccchhhhhccccccccEE
Q 037916 204 TINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLV-----GSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQL 278 (741)
Q Consensus 204 ~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 278 (741)
.+.| .|.++...+.+|.++++|+. +++.+|.+. .+.+..|.++++|+.++|. |.++.+...+|.++++|+.|
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~-l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l 328 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAE-VTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQL 328 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCE-EEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEE
T ss_pred EEEe-CCCccEEChhHhhCCCCCCE-EEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEE
Confidence 7777 44566566677777777776 777777654 3566788888899999988 45888888889999999999
Q ss_pred EeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccc-cCCcccccCccccc
Q 037916 279 KLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQ-LVQNLNLSYNDLEG 335 (741)
Q Consensus 279 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~ 335 (741)
.|..| ++.+...+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+..
T Consensus 329 ~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 329 TIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp EECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred EECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 99655 776778889888 899999999988877777888774 67888888777653
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=2.3e-19 Score=173.28 Aligned_cols=174 Identities=19% Similarity=0.207 Sum_probs=116.9
Q ss_pred ceeeccCcccccccCcccccCCCCCEEeccCccccccCCc-cccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEec
Q 037916 179 LQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPP-QLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFIS 257 (741)
Q Consensus 179 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 257 (741)
+.+++++|.++ .+|..+. .+|++|+|++|+|++..+. .|..+++|+. |+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVK-LELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCE-EECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCE-EECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 67788888886 4555443 3788888888888755543 3777888876 8888888887777788888888888888
Q ss_pred cccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccch-hhhccccCCcccccCcccccc
Q 037916 258 RNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPK-FLVELQLVQNLNLSYNDLEGV 336 (741)
Q Consensus 258 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~ 336 (741)
+|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+- ++. ..++...+.++...+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCC
Confidence 8888877777788888888888888888877777788888888888888887765432 111 1233334444544444
Q ss_pred cCCccccCCcccccccCCCCcccc
Q 037916 337 IPTEGVFKNASAISVFGNSKLCGG 360 (741)
Q Consensus 337 ~~~~~~~~~~~~~~~~~n~~~c~~ 360 (741)
.|.. +....-.++..+...|..
T Consensus 165 ~P~~--l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 165 APSK--VRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp SSTT--TTTSBGGGSCTTTCCCCC
T ss_pred CChH--HcCCChhhCcHhhcCcCC
Confidence 3432 333333444455555543
No 377
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2.2e-19 Score=181.99 Aligned_cols=138 Identities=21% Similarity=0.124 Sum_probs=105.0
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeE--EEEEEeeccCcCc------------------------chhHHHHHHHHHhcC
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTI--IAVKVLNLLHHGA------------------------SKSSIAECSALRNIR 455 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~--vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 455 (741)
|.+.+.||+|+||.||+|.+..+|+. ||||+++...... ...+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45667899999999999999667888 9999976321110 125678999999998
Q ss_pred CCce--eeEeeeecCccccCCceEEEEEecccC-C----ChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHH
Q 037916 456 HKNL--VKILTVCSGVDYKGDDFKALVYEFMHN-G----SLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528 (741)
Q Consensus 456 hpnI--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 528 (741)
|++| +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHHH
Confidence 8754 344432 245899999942 3 56555321 22345678999999999999
Q ss_pred H-hcCCCCceecCCCCCCeEeCCCCceEEeecccccccC
Q 037916 529 H-HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP 566 (741)
Q Consensus 529 H-~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~ 566 (741)
| +. ||+||||||+|||++. .++|+|||+|....
T Consensus 187 H~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 187 YQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHTS---CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9 88 9999999999999988 99999999997643
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.78 E-value=5.7e-18 Score=182.29 Aligned_cols=268 Identities=12% Similarity=0.092 Sum_probs=226.6
Q ss_pred hCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCc
Q 037916 18 FTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPG 97 (741)
Q Consensus 18 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~ 97 (741)
.....++.+.+.++ ++.+...+|.+. +|+.+.|.+| ++.+...+|.+. +|+.++|.+ .++.+.+.
T Consensus 110 ~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-----------~L~~i~lp~-~l~~I~~~ 174 (401)
T 4fdw_A 110 EILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-----------TVQEIVFPS-TLEQLKED 174 (401)
T ss_dssp EECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-----------CCCEEECCT-TCCEECSS
T ss_pred EecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-----------CceEEEeCC-CccEehHH
Confidence 34577888888764 777888899885 7999999776 776777788763 399999986 78878888
Q ss_pred hhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcc
Q 037916 98 CICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKK 177 (741)
Q Consensus 98 ~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 177 (741)
+|.++. +|+.++|.+|++..+...+|. ..+|+.+.|..+ ++.+...+|.++++|+.++|..| ++.+...+|.+ .+
T Consensus 175 aF~~c~-~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 175 IFYYCY-NLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SG 249 (401)
T ss_dssp TTTTCT-TCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CC
T ss_pred HhhCcc-cCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CC
Confidence 998888 899999999999888888887 589999999855 88888999999999999999875 67688888988 88
Q ss_pred cceeeccCcccccccCcccccCCCCCEEeccCcccc-----ccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCc
Q 037916 178 LLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLS-----GTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLE 252 (741)
Q Consensus 178 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~ 252 (741)
|+.+.| .|.++.+...+|.++++|+.+++.+|.+. ...+..|.++++|+. ++|. |.++.+...+|.++++|+
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~-l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLAR-FEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCE-ECCC-TTCCEECTTTTTTCCSCC
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCe-EEeC-CceEEEhhhhhcCCCCcc
Confidence 999999 45577788889999999999999988775 467788999999997 9999 458777788999999999
Q ss_pred EEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCc-cCCeeeCCCCcCC
Q 037916 253 ILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLR-GLRVLDLSQNNIS 310 (741)
Q Consensus 253 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 310 (741)
.|+|..| ++.+...+|.++ +|+.|++++|.+....+..|.+++ ++..|++..+.+.
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 9999665 888899999999 999999999999988888999885 7889998887654
No 379
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=1e-18 Score=169.57 Aligned_cols=153 Identities=19% Similarity=0.288 Sum_probs=119.0
Q ss_pred hcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccc
Q 037916 100 CNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLL 179 (741)
Q Consensus 100 ~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 179 (741)
..+. +|+.|++++|.+. .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..+..|+.+++|+
T Consensus 41 ~~l~-~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMN-SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHH-TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcC-CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 4555 7888888888885 344 67888888888888887763 34788888899999999998877788888889999
Q ss_pred eeeccCcccccccCcccccCCCCCEEeccCcc-ccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEecc
Q 037916 180 QLYLIENFLQVSIPSSLGQCQSLTTINLSYNN-LSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258 (741)
Q Consensus 180 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 258 (741)
+|+|++|.+++..|..|..+++|++|+|++|+ ++ .+| .+..+++|+. |++++|.+++ ++ .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~-L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKS-LNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCE-EECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCE-EECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 99999999887778888889999999999998 65 455 5777888876 8888888874 33 677777777777777
Q ss_pred cccc
Q 037916 259 NMLE 262 (741)
Q Consensus 259 N~l~ 262 (741)
|+|.
T Consensus 191 N~i~ 194 (197)
T 4ezg_A 191 QTIG 194 (197)
T ss_dssp C---
T ss_pred cccC
Confidence 7765
No 380
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=3.6e-18 Score=164.80 Aligned_cols=155 Identities=24% Similarity=0.246 Sum_probs=77.3
Q ss_pred CEEeccCccccccCCccccccccceeEEEcCCCccCCCCCh-hhcCCCCCcEEEeccccccchhhhhccccccccEEEeC
Q 037916 203 TTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPT-EVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLG 281 (741)
Q Consensus 203 ~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 281 (741)
++|++++|+++ .+|..+.. +++. |+|++|+|++..+. .|+.+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~-L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTE-LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSE-EECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCE-EECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 44555555554 44443332 4443 55555555544432 25555555555555555555555555555555555555
Q ss_pred CCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCcccccccCCccccCCcccccccCCCCccccC
Q 037916 282 GNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGI 361 (741)
Q Consensus 282 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 361 (741)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..+....+....+.++...|+.+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 55555555555555555555555555555555555555555555555555555444332222222222333444445444
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=4e-18 Score=164.49 Aligned_cols=130 Identities=23% Similarity=0.279 Sum_probs=77.0
Q ss_pred CEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCC
Q 037916 203 TTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGG 282 (741)
Q Consensus 203 ~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 282 (741)
+.+++++|+++ .+|..+. .+++. |+|++|+|+ .+|..|..+++|+.|+|++|.|+++.+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~-L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTE-LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCE-EECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCE-EECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 34555555555 4444332 24444 566666655 4445566666666666666666665556666666666666666
Q ss_pred CccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccccccc
Q 037916 283 NLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDLEGVI 337 (741)
Q Consensus 283 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 337 (741)
|+|+++.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 6666666666666666666666666666555555666666666666666665543
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=160.42 Aligned_cols=136 Identities=21% Similarity=0.321 Sum_probs=100.9
Q ss_pred hccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCC
Q 037916 73 CVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQ 152 (741)
Q Consensus 73 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 152 (741)
|...|...-+.+++++|+|+. +|..+. .+|++|+|++|+|. .+|..|..+++|++|+|++|+|+++.+..|.+++
T Consensus 4 CP~~C~C~~~~l~~~~~~l~~-ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~ 78 (193)
T 2wfh_A 4 CPTECTCLDTVVRCSNKGLKV-LPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 78 (193)
T ss_dssp CCTTCEEETTEEECTTSCCSS-CCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCCCEeCCCEEEcCCCCCCc-CCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCC
Confidence 334444446788888888884 444332 27888888888875 4557788888888888888888877777788888
Q ss_pred cCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCcccc
Q 037916 153 NLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLS 213 (741)
Q Consensus 153 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 213 (741)
+|++|+|++|+|+++.+.+|.++++|++|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 79 ~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 79 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 8888888888888777777777888888888888877666667777777777777777775
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=2.4e-17 Score=156.89 Aligned_cols=137 Identities=22% Similarity=0.220 Sum_probs=100.7
Q ss_pred cccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcC
Q 037916 75 QNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNL 154 (741)
Q Consensus 75 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 154 (741)
..|....+.+++++|+++.+ |..+. .+|+.|++++|++.+..+..|..+++|++|+|++|+|+++.+..|.++++|
T Consensus 3 ~~C~C~~~~l~~~~~~l~~~-p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 78 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKGLTSV-PTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78 (177)
T ss_dssp TTCEEETTEEECCSSCCSSC-CTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCEeCCCEEEecCCCCccC-CCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCcc
Confidence 44555678888888888844 43322 277888888888877777777778888888888888887777777778888
Q ss_pred cEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCcccccc
Q 037916 155 VTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGT 215 (741)
Q Consensus 155 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 215 (741)
++|+|++|+|+++.+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++.
T Consensus 79 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 8888888888776666677777777777777777766666667777777777777777643
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=3.4e-17 Score=154.38 Aligned_cols=135 Identities=21% Similarity=0.236 Sum_probs=90.2
Q ss_pred CccEEECcCCcCc-ccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEE
Q 037916 80 HLKHLDINNNNFG-GLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLA 158 (741)
Q Consensus 80 ~L~~L~Ls~N~l~-~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 158 (741)
+|++|+|++|+++ +.+|..+..+. +|+.|++++|.+... ..|..+++|++|+|++|+|++.+|..+..+++|++|+
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cCCEEECCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 4666666666665 44555555555 666666666666554 5667777777777777777766666666677777777
Q ss_pred cccCCCCCcCc-ccccCCcccceeeccCcccccccC---cccccCCCCCEEeccCccccccCCc
Q 037916 159 INTNKLSGNIP-PSIGNLKKLLQLYLIENFLQVSIP---SSLGQCQSLTTINLSYNNLSGTIPP 218 (741)
Q Consensus 159 L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~ 218 (741)
|++|+|+++.. ..|..+++|++|++++|.+++..+ ..|..+++|++|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 77777775422 567777777777777777775544 46677777777777777766 4443
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=4e-17 Score=153.92 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=94.6
Q ss_pred CCCCEEeccCcccc-ccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEE
Q 037916 200 QSLTTINLSYNNLS-GTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQL 278 (741)
Q Consensus 200 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 278 (741)
++|++|++++|+++ +.+|..+..+++|+. |+|++|.|++. ..|..+++|++|+|++|++++..+..+..+++|+.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~-L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEF-LSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCE-EEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCE-EeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56677777777766 566666667777766 77777777644 566677777777777777776666666667777777
Q ss_pred EeCCCccCCCCC-hhcccCccCCeeeCCCCcCCCccc---hhhhccccCCcccccCcccccccC
Q 037916 279 KLGGNLFQGPIP-LSLSSLRGLRVLDLSQNNISGEIP---KFLVELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 279 ~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~ 338 (741)
+|++|++++... ..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+...+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 777777775432 567777777777777777775554 467777777777777777765543
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=1.1e-16 Score=147.59 Aligned_cols=127 Identities=21% Similarity=0.149 Sum_probs=62.9
Q ss_pred cccceeeccCcccc-cccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEE
Q 037916 176 KKLLQLYLIENFLQ-VSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEIL 254 (741)
Q Consensus 176 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 254 (741)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|+. |+|++|.+++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~-L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKK-LELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCE-EECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCE-EECCCCcccchHHHHhhhCCCCCEE
Confidence 34444444444444 33444444455555555555555432 44445555554 5555555554445555555555555
Q ss_pred Eeccccccch-hhhhccccccccEEEeCCCccCCCCC---hhcccCccCCeeeCC
Q 037916 255 FISRNMLECE-ILSTLGSCIKLEQLKLGGNLFQGPIP---LSLSSLRGLRVLDLS 305 (741)
Q Consensus 255 ~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 305 (741)
++++|+++++ .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5555555543 22445555555555555555554433 344555555555543
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.6e-16 Score=151.15 Aligned_cols=109 Identities=24% Similarity=0.209 Sum_probs=54.6
Q ss_pred EEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcC
Q 037916 230 LDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNI 309 (741)
Q Consensus 230 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 309 (741)
|++++|++++..+..|+.+++|++|+|++|+|+++.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++
T Consensus 33 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 112 (177)
T 2o6r_A 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQL 112 (177)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcc
Confidence 44444444444444444445555555555555544444445555555555555555544444455555555555555555
Q ss_pred CCccchhhhccccCCcccccCcccccccC
Q 037916 310 SGEIPKFLVELQLVQNLNLSYNDLEGVIP 338 (741)
Q Consensus 310 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 338 (741)
++..+..|..+++|+.|+|++|++++.++
T Consensus 113 ~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 113 KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 54444444455555555555555554433
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=2.6e-17 Score=172.79 Aligned_cols=138 Identities=12% Similarity=0.130 Sum_probs=100.2
Q ss_pred HHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcC--------------cchh--------HHHHHHHHHhcCCCce
Q 037916 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--------------ASKS--------SIAECSALRNIRHKNL 459 (741)
Q Consensus 402 y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~E~~~l~~l~hpnI 459 (741)
|.+.+.||+|++|.||+|.+. +|+.||||+++..... .... ..+|...|.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 788889999999999999986 6899999998632110 0011 1345666666644433
Q ss_pred e--eEeeeecCccccCCceEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCce
Q 037916 460 V--KILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537 (741)
Q Consensus 460 v--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv 537 (741)
. ..+++ ...++||||++|++|.++... .....++.|++.+|.+||+. |||
T Consensus 176 ~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~----------------~~~~~l~~qll~~l~~lH~~---gIV 227 (397)
T 4gyi_A 176 PVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV----------------PDPASLYADLIALILRLAKH---GLI 227 (397)
T ss_dssp SCCCEEEE---------ETTEEEEECCSCEEGGGCCCC----------------SCHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCeeeec---------cCceEEEEecCCccHhhhccc----------------HHHHHHHHHHHHHHHHHHHC---CCc
Confidence 2 22222 124799999999888776431 12346889999999999999 999
Q ss_pred ecCCCCCCeEeCCCC----------ceEEeecccccccCCC
Q 037916 538 HCDLKPSNVLLDHEM----------TAHVADFGLAKLLPPA 568 (741)
Q Consensus 538 HrDlkp~NIll~~~~----------~~kL~DFg~a~~~~~~ 568 (741)
||||||.|||+++++ .+.|+||+.+.....+
T Consensus 228 HrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp 268 (397)
T 4gyi_A 228 HGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHP 268 (397)
T ss_dssp CSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred CCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence 999999999998776 3899999988765433
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.3e-16 Score=147.14 Aligned_cols=129 Identities=19% Similarity=0.195 Sum_probs=115.4
Q ss_pred CCCCCEEeccCcccc-ccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccE
Q 037916 199 CQSLTTINLSYNNLS-GTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQ 277 (741)
Q Consensus 199 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 277 (741)
.++|+.|++++|+++ +.+|..+..+++|+. |++++|.+++. ..++.+++|++|+|++|.+++..+..+..+++|++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEF-LSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCE-EECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcE-EECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 368999999999998 788999999999998 99999999966 78899999999999999999878888888999999
Q ss_pred EEeCCCccCCC-CChhcccCccCCeeeCCCCcCCCccc---hhhhccccCCcccccC
Q 037916 278 LKLGGNLFQGP-IPLSLSSLRGLRVLDLSQNNISGEIP---KFLVELQLVQNLNLSY 330 (741)
Q Consensus 278 L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~ 330 (741)
|++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999974 34789999999999999999997766 5789999999999874
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.66 E-value=1.4e-15 Score=164.29 Aligned_cols=293 Identities=10% Similarity=0.016 Sum_probs=170.2
Q ss_pred cCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc
Q 037916 11 GIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN 90 (741)
Q Consensus 11 ~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~ 90 (741)
+|+...|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.+..+ |+.+.+..+
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~----------L~~i~~p~~- 127 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYA----------LKSILLPLM- 127 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTT----------CCCCCCCTT-
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhccccc----------chhhcccCc-
Confidence 46777777889999999975 488788889999999999999755 66677778887765 776666543
Q ss_pred CcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcc
Q 037916 91 FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPP 170 (741)
Q Consensus 91 l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 170 (741)
+..+...+|.... +...... +.+..+...+|.++.+|+.+.+.++. ..+...+|.++.+|+.+.+..| ++.+...
T Consensus 128 l~~i~~~aF~~~~--~~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~ 202 (394)
T 4fs7_A 128 LKSIGVEAFKGCD--FKEITIP-EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY 202 (394)
T ss_dssp CCEECTTTTTTCC--CSEEECC-TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT
T ss_pred eeeecceeeeccc--ccccccC-ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch
Confidence 4445555665543 2222222 22234556677777777777776553 4466777777777777777666 5546666
Q ss_pred cccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCCh-------
Q 037916 171 SIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPT------- 243 (741)
Q Consensus 171 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~------- 243 (741)
+|.+...|+.+.+..+... +...+....+|+.+.+..+ ++......|.+...++. +.+..+... +...
T Consensus 203 ~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~-~~~~~~~~~-i~~~~F~~~~~ 277 (394)
T 4fs7_A 203 CFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLES-ISIQNNKLR-IGGSLFYNCSG 277 (394)
T ss_dssp TTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCE-EEECCTTCE-ECSCTTTTCTT
T ss_pred hhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceeccccccccccccee-EEcCCCcce-eeccccccccc
Confidence 7777777777766655332 1122222344444444322 22233334444444443 444443322 3333
Q ss_pred --------------hhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcC
Q 037916 244 --------------EVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNI 309 (741)
Q Consensus 244 --------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 309 (741)
.|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+++..| +
T Consensus 278 l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l 354 (394)
T 4fs7_A 278 LKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-L 354 (394)
T ss_dssp CCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred cceeccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-c
Confidence 4445555555555433 44455555555555555555433 44444555555555555555544 4
Q ss_pred CCccchhhhccccCCccccc
Q 037916 310 SGEIPKFLVELQLVQNLNLS 329 (741)
Q Consensus 310 ~~~~~~~~~~l~~L~~L~l~ 329 (741)
+.+...+|.++.+|+.+++.
T Consensus 355 ~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 355 RKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CEECTTTBTTCTTCCEEEEE
T ss_pred cEehHHHhhCCCCCCEEEEC
Confidence 44444555555555555554
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.63 E-value=4.6e-16 Score=147.77 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=89.2
Q ss_pred cccCCCCccEEEcccccccccCCccccCCC-cCcEEEcccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCC
Q 037916 123 GIGKFINLQTLHMWDNQLSGTISPAIGELQ-NLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQS 201 (741)
Q Consensus 123 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 201 (741)
.+..+.+|++|+|++|+|+.+ +. +..+. +|++|+|++|+|+++ ..|..+++|++|+|++|.|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 345566777777777777744 33 33333 777777777777754 56777777777777777777655555677777
Q ss_pred CCEEeccCccccccCCc--cccccccceeEEEcCCCccCCCCCh----hhcCCCCCcEEEeccccccc
Q 037916 202 LTTINLSYNNLSGTIPP--QLMDLTSLSVGLDLSRNQLVGSLPT----EVGKLINLEILFISRNMLEC 263 (741)
Q Consensus 202 L~~L~L~~N~l~~~~p~--~~~~l~~L~~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~ 263 (741)
|++|+|++|+|+ .+|. .+..+++|+. |++++|.+.. .|. .+..+++|+.|++++|.+..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~-L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTY-LCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCE-EECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCE-EEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 777777777775 4554 5666777776 7777777763 343 36777777777777777654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=1.5e-17 Score=161.50 Aligned_cols=153 Identities=22% Similarity=0.216 Sum_probs=94.1
Q ss_pred CcccceeeccCcccccccCc------ccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCC
Q 037916 175 LKKLLQLYLIENFLQVSIPS------SLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKL 248 (741)
Q Consensus 175 l~~L~~L~L~~N~i~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l 248 (741)
...++.++++.|.+.+..|. .|..+++|++|+|++|+|++ +| .+.++++|+. |++++|.|+ .+|..+..+
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~-L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRI-LSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCE-EEEEEEEEC-SCSSHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCE-EECCCCCcc-cccchhhcC
Confidence 34444444444444444443 56666666666666666663 45 5666666665 666666666 455556666
Q ss_pred CCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCC-hhcccCccCCeeeCCCCcCCCccch----------hh
Q 037916 249 INLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIP-LSLSSLRGLRVLDLSQNNISGEIPK----------FL 317 (741)
Q Consensus 249 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~ 317 (741)
++|++|+|++|+++++. .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++..|. .+
T Consensus 93 ~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 67777777777776532 46666777777777777764332 3566777777777777777655443 26
Q ss_pred hccccCCcccccCccccc
Q 037916 318 VELQLVQNLNLSYNDLEG 335 (741)
Q Consensus 318 ~~l~~L~~L~l~~N~l~~ 335 (741)
..+++|+.|| +|+++.
T Consensus 171 ~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHCSSCSEEC--CGGGTT
T ss_pred HhCCCcEEEC--CcccCH
Confidence 6777777765 666653
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=1.1e-17 Score=162.42 Aligned_cols=151 Identities=28% Similarity=0.348 Sum_probs=93.3
Q ss_pred CcCcEEEcccCCCCCcCcc------cccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccccccc
Q 037916 152 QNLVTLAINTNKLSGNIPP------SIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTS 225 (741)
Q Consensus 152 ~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 225 (741)
.+++.++++.|.+++..|. .|..+++|++|+|++|.+++ +| .+..+++|++|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444333 56666666666666666654 34 5666666666666666666 55665666666
Q ss_pred ceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhh-hhccccccccEEEeCCCccCCCCCh----------hcc
Q 037916 226 LSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEIL-STLGSCIKLEQLKLGGNLFQGPIPL----------SLS 294 (741)
Q Consensus 226 L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----------~~~ 294 (741)
|+. |+|++|++++ +| .+..+++|++|+|++|+++.+.. ..+..+++|++|++++|.+.+..|. .+.
T Consensus 95 L~~-L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 95 LEE-LWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp CSE-EEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred CCE-EECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 665 7777776664 33 56667777777777777765443 5666777777777777777655443 267
Q ss_pred cCccCCeeeCCCCcCC
Q 037916 295 SLRGLRVLDLSQNNIS 310 (741)
Q Consensus 295 ~l~~L~~L~Ls~N~l~ 310 (741)
.+++|+.|| +|.++
T Consensus 172 ~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVD 185 (198)
T ss_dssp HCSSCSEEC--CGGGT
T ss_pred hCCCcEEEC--CcccC
Confidence 777888776 66665
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=4.4e-16 Score=147.93 Aligned_cols=134 Identities=17% Similarity=0.154 Sum_probs=80.3
Q ss_pred cccCCCCCEEeccCccccccCCccccccc-cceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhcccccc
Q 037916 196 LGQCQSLTTINLSYNNLSGTIPPQLMDLT-SLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIK 274 (741)
Q Consensus 196 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 274 (741)
+.++.+|+.|++++|+++ .+|. +..+. +|+. |+|++|.|++. ..|+.+++|++|+|++|+|+++.+..|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~-L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDA-IDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSE-EECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCE-EECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 344455555555555555 3333 33333 5554 66666655543 35566666666666666666655555566666
Q ss_pred ccEEEeCCCccCCCCCh--hcccCccCCeeeCCCCcCCCccch----hhhccccCCcccccCcccccc
Q 037916 275 LEQLKLGGNLFQGPIPL--SLSSLRGLRVLDLSQNNISGEIPK----FLVELQLVQNLNLSYNDLEGV 336 (741)
Q Consensus 275 L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~ 336 (741)
|++|+|++|+|+. +|. .+..+++|+.|+|++|.++. .|. .+..+++|+.||+++|.+...
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 7777777776653 333 56677777777777777763 343 367777777777777776543
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=4.4e-15 Score=139.94 Aligned_cols=113 Identities=24% Similarity=0.372 Sum_probs=74.3
Q ss_pred hccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCC
Q 037916 73 CVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQ 152 (741)
Q Consensus 73 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 152 (741)
|...|....+.|++++|.|+. +|..+. .+|++|+|++|+|.++.|..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 3 CP~~C~C~~~~l~~s~n~l~~-ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~ 78 (170)
T 3g39_A 3 CPSQCSCSGTTVDCSGKSLAS-VPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78 (170)
T ss_dssp CC-CCEEETTEEECTTSCCSS-CCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CcCcCCcCCCEEEeCCCCcCc-cCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC
Confidence 445565567888888888884 443332 2677777777777666666677777777777777777666666666666
Q ss_pred cCcEEEcccCCCCCcCcccccCCcccceeeccCcccc
Q 037916 153 NLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQ 189 (741)
Q Consensus 153 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 189 (741)
+|++|+|++|+|+++.+..|.++++|++|+|++|.++
T Consensus 79 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 79 QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6666666666666555555666666666666666555
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=3.4e-14 Score=153.40 Aligned_cols=292 Identities=10% Similarity=0.020 Sum_probs=195.3
Q ss_pred cccccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEEC
Q 037916 7 RVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDI 86 (741)
Q Consensus 7 ~~~~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L 86 (741)
.+. .|+...|.++++|+.++|..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+.. +....+
T Consensus 81 ~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~-----------~~~~~~ 146 (394)
T 4fs7_A 81 TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD-----------FKEITI 146 (394)
T ss_dssp TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC-----------CSEEEC
T ss_pred Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc-----------cccccc
Confidence 344 678888888999999999866 77788899999999999887654 4445555665543 222221
Q ss_pred cCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCC---
Q 037916 87 NNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNK--- 163 (741)
Q Consensus 87 s~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~--- 163 (741)
. +.+..+...+|.+.. +|+.+.+.++ +..+....|.++.+|+.+++..| ++.+...+|.++..|+.+.+..+.
T Consensus 147 ~-~~~~~i~~~aF~~c~-~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i 222 (394)
T 4fs7_A 147 P-EGVTVIGDEAFATCE-SLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYL 222 (394)
T ss_dssp C-TTCCEECTTTTTTCT-TCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEE
T ss_pred C-ccccccchhhhcccC-CCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEe
Confidence 1 112223334444444 4555555433 22344444555555555555444 333444444444444444443322
Q ss_pred ------------------CCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCcccccccc
Q 037916 164 ------------------LSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTS 225 (741)
Q Consensus 164 ------------------l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 225 (741)
++.+...+|.+..+|+.+.+..+... +....|..+..++.+.+..+.+ ....|.+..+
T Consensus 223 ~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~ 298 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSS 298 (394)
T ss_dssp CTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTT
T ss_pred ehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cccccccccc
Confidence 23344556677777777777766443 5666777777777777766543 3456778888
Q ss_pred ceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCC
Q 037916 226 LSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLS 305 (741)
Q Consensus 226 L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 305 (741)
|+. +.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..| ++.+...+|.++++|+.+++.
T Consensus 299 L~~-i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 299 LTE-VKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CCE-EEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred ccc-cccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 887 888765 66577789999999999999755 88889999999999999999887 777888999999999999997
Q ss_pred CCcCCCccchhhhccccCCcc
Q 037916 306 QNNISGEIPKFLVELQLVQNL 326 (741)
Q Consensus 306 ~N~l~~~~~~~~~~l~~L~~L 326 (741)
.+ ++ .....|.++++|+.+
T Consensus 375 ~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 375 KR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp GG-GG-GGGGGBCTTCEEEEE
T ss_pred CC-CE-EhhheecCCCCCcEE
Confidence 65 44 345678888777654
No 397
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.55 E-value=1.2e-13 Score=149.15 Aligned_cols=301 Identities=10% Similarity=0.061 Sum_probs=213.1
Q ss_pred cCChhhhhCCC-CCcEEEcccCcccccCCccCCCCCCCcEEEeecCc---CcccCCchhhhhhhhhhccccCCCccEEEC
Q 037916 11 GIPLDFGFTLP-NLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNN---LTGEVPSEFGKATKAYCVQNCNQHLKHLDI 86 (741)
Q Consensus 11 ~ip~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~~~~~~~~~~~L~~L~L 86 (741)
.|+...|.+.. .|+.+.|-.+ ++.+...+|.++++|+.+.+..|. ++.+-..+|....+ |+.+.+
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~----------L~~i~~ 121 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSE----------LTDIPI 121 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTT----------CCBCGG
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhccc----------ceeecc
Confidence 56666665554 5899999765 777888999999999999998774 66666777877665 777776
Q ss_pred cCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCC
Q 037916 87 NNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSG 166 (741)
Q Consensus 87 s~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 166 (741)
..+ ++.+...+|.... +|+.+.+..+ +..+....|....+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-..
T Consensus 122 ~~~-~~~I~~~aF~~c~-~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~- 195 (394)
T 4gt6_A 122 LDS-VTEIDSEAFHHCE-ELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR- 195 (394)
T ss_dssp GTT-CSEECTTTTTTCT-TCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-
T ss_pred CCc-cceehhhhhhhhc-ccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-
Confidence 554 5556667777777 8888888754 45677778888888888888765 56577777765 56888888766443
Q ss_pred cCcccccCCcccceeeccCcccccccCccc-------------ccCCCCCEEeccCccccccCCccccccccceeEEEcC
Q 037916 167 NIPPSIGNLKKLLQLYLIENFLQVSIPSSL-------------GQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLS 233 (741)
Q Consensus 167 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls 233 (741)
+...+|.+..+|.......+.........+ .....+..+.+. +.++..-..+|.+...|+. +.+.
T Consensus 196 i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~-i~lp 273 (394)
T 4gt6_A 196 IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLAS-VKMP 273 (394)
T ss_dssp ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCE-EECC
T ss_pred cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccE-Eecc
Confidence 666778887777777666554432211111 112233444443 2344355567777788876 8877
Q ss_pred CCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCcc
Q 037916 234 RNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEI 313 (741)
Q Consensus 234 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (741)
.+... +...+|.++++|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.|..+ ++.+.
T Consensus 274 ~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 274 DSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp TTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCC
T ss_pred cccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEh
Confidence 66544 566778888888888885 5567777888888888888888765 66677788888888888888654 66667
Q ss_pred chhhhccccCCcccccCcccc
Q 037916 314 PKFLVELQLVQNLNLSYNDLE 334 (741)
Q Consensus 314 ~~~~~~l~~L~~L~l~~N~l~ 334 (741)
..+|.++++|+.+++.+|...
T Consensus 350 ~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp GGGGTTCTTCCEEEESSCHHH
T ss_pred HhHhhCCCCCCEEEECCceee
Confidence 778888888888888887644
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.5e-14 Score=136.74 Aligned_cols=113 Identities=26% Similarity=0.390 Sum_probs=64.4
Q ss_pred hccccCCCccEEECcCCcCcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCC
Q 037916 73 CVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQ 152 (741)
Q Consensus 73 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 152 (741)
|...|...-+.+++++|+++. +|..+. .+|+.|+|++|+|.+..|..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 6 CP~~C~C~~~~l~~~~n~l~~-iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 81 (174)
T 2r9u_A 6 CPSQCSCDQTLVNCQNIRLAS-VPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT 81 (174)
T ss_dssp SCTTSEECSSEEECCSSCCSS-CCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCCCEECCcEEEeCCCCCCc-cCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc
Confidence 344444456777777777763 343322 2566666666666555555666666666666666666655555555555
Q ss_pred cCcEEEcccCCCCCcCcccccCCcccceeeccCcccc
Q 037916 153 NLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQ 189 (741)
Q Consensus 153 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 189 (741)
+|++|+|++|+|+++.+..|..+++|++|+|++|.+.
T Consensus 82 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 82 QLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred hhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 6666666666555444444555555555555555544
No 399
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=1.7e-14 Score=135.84 Aligned_cols=106 Identities=25% Similarity=0.241 Sum_probs=63.5
Q ss_pred CCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeC
Q 037916 202 LTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLG 281 (741)
Q Consensus 202 L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 281 (741)
.+.|++++|+++ .+|..+. ++++. |+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~-L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQV-LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSE-EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcE-EEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 456666666666 4554442 45554 6666666665556666666666666666666666555556666666666666
Q ss_pred CCccCCCCChhcccCccCCeeeCCCCcCCC
Q 037916 282 GNLFQGPIPLSLSSLRGLRVLDLSQNNISG 311 (741)
Q Consensus 282 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 311 (741)
+|+|+++.+..|..+++|+.|+|++|.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 666665555556666666666666666553
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=2.9e-14 Score=134.80 Aligned_cols=105 Identities=29% Similarity=0.311 Sum_probs=81.3
Q ss_pred ccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccC
Q 037916 106 LETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIE 185 (741)
Q Consensus 106 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 185 (741)
-+.+++++|++ +.+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 36788888887 44555554 6788888888888887788888888888888888888876666677888888888888
Q ss_pred cccccccCcccccCCCCCEEeccCcccc
Q 037916 186 NFLQVSIPSSLGQCQSLTTINLSYNNLS 213 (741)
Q Consensus 186 N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 213 (741)
|+|+++.+..|..+++|++|+|++|++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 8888666666777888888888888776
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.48 E-value=1e-12 Score=141.78 Aligned_cols=300 Identities=11% Similarity=0.134 Sum_probs=229.3
Q ss_pred cccccCCccCCCCC-CCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc---CcccCCchhhccccccc
Q 037916 32 QITGVIPSSMFNAS-KLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN---FGGLLPGCICNFSITLE 107 (741)
Q Consensus 32 ~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~---l~~~~~~~~~~l~~~L~ 107 (741)
.++.+...+|.+.. .|+.+.|-.+ ++.+-..+|.++++ |+.+.++.|. ++.+...+|.... +|+
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~----------L~~i~~~~n~p~~l~~Ig~~aF~~c~-~L~ 117 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTS----------LKRVTIQDNKPSCVKKIGRQAFMFCS-ELT 117 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTT----------CCEEEEGGGCCCCCCEECTTTTTTCT-TCC
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCcc----------CceEeecCCCCCeeeEechhhchhcc-cce
Confidence 35667778898884 6999999754 88788889998876 9999998874 7777778888877 888
Q ss_pred EEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccCcc
Q 037916 108 TLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENF 187 (741)
Q Consensus 108 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 187 (741)
.+.+..+ +..+...+|..+.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-
T Consensus 118 ~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~ 193 (394)
T 4gt6_A 118 DIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV 193 (394)
T ss_dssp BCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC
T ss_pred eeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc
Confidence 8887765 66778888999999999999755 55588899999999999999866 55577778876 679999987764
Q ss_pred cccccCcccccCCCCCEEeccCccccccCCcccccc--------------ccceeEEEcCCCccCCCCChhhcCCCCCcE
Q 037916 188 LQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDL--------------TSLSVGLDLSRNQLVGSLPTEVGKLINLEI 253 (741)
Q Consensus 188 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--------------~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~ 253 (741)
. .....+|.++.+|.......+... .....+... ..+.. +.+. +.+..+...+|.++.+|+.
T Consensus 194 ~-~i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ip-~~v~~i~~~aF~~c~~L~~ 269 (394)
T 4gt6_A 194 T-RIGTNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPA-FKIP-NGVARIETHAFDSCAYLAS 269 (394)
T ss_dssp C-EECTTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSE-EECC-TTEEEECTTTTTTCSSCCE
T ss_pred c-ccccchhhhccccceecccccccc-cccceeecccccccccccccccccccce-EEcC-CcceEcccceeeecccccE
Confidence 4 367788999999998887776654 333322211 11111 2222 2344355678999999999
Q ss_pred EEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcccccCccc
Q 037916 254 LFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNLNLSYNDL 333 (741)
Q Consensus 254 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 333 (741)
+.+..+.. .+...+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ +
T Consensus 270 i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v 345 (394)
T 4gt6_A 270 VKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-V 345 (394)
T ss_dssp EECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-C
T ss_pred Eecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-c
Confidence 99987654 4888999999999999996 5677688899999999999999865 77677889999999999999654 6
Q ss_pred ccccCCc-cccCCcccccccCCC
Q 037916 334 EGVIPTE-GVFKNASAISVFGNS 355 (741)
Q Consensus 334 ~~~~~~~-~~~~~~~~~~~~~n~ 355 (741)
+.+.... ..+.++..+.+.++.
T Consensus 346 ~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 346 TKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CBCCGGGGTTCTTCCEEEESSCH
T ss_pred CEEhHhHhhCCCCCCEEEECCce
Confidence 5443322 234668888888774
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.44 E-value=3.5e-15 Score=158.96 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=68.3
Q ss_pred ccEEECcCCcCcccCCchhhc-ccccccEEEccCCcccccCCccc-----cCCCCccEEEcccccccccC----CccccC
Q 037916 81 LKHLDINNNNFGGLLPGCICN-FSITLETLIFNSNKIFRSIPAGI-----GKFINLQTLHMWDNQLSGTI----SPAIGE 150 (741)
Q Consensus 81 L~~L~Ls~N~l~~~~~~~~~~-l~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~L~~N~i~~~~----~~~~~~ 150 (741)
|++|+|++|.|+......+.. +. +|+.|+|++|+|.......+ ...++|++|+|++|.|+... +..+..
T Consensus 103 L~~L~Ls~n~l~~~~~~~l~~~L~-~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 103 LDEVNLASCQLDPAGLRTLLPVFL-RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp EEEEECTTCCCCHHHHHHTHHHHH-TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred ceEEEecCCCCCHHHHHHHHHHHH-hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 555555555544322222221 22 45555555555533322222 23455666666666665322 233355
Q ss_pred CCcCcEEEcccCCCCCcC----cccccCCcccceeeccCcccccc----cCcccccCCCCCEEeccCcccccc
Q 037916 151 LQNLVTLAINTNKLSGNI----PPSIGNLKKLLQLYLIENFLQVS----IPSSLGQCQSLTTINLSYNNLSGT 215 (741)
Q Consensus 151 l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 215 (741)
+++|++|+|++|+|+... +..+...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+..
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 566666666666665321 33455556666666666666542 223344456677777777776643
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=1.3e-14 Score=154.50 Aligned_cols=184 Identities=15% Similarity=0.184 Sum_probs=131.0
Q ss_pred CCccEEECcCCcCcccCCchhhcc----cccccEEEccCCcccccCCccc-cCCCCccEEEcccccccccCCccc-----
Q 037916 79 QHLKHLDINNNNFGGLLPGCICNF----SITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAI----- 148 (741)
Q Consensus 79 ~~L~~L~Ls~N~l~~~~~~~~~~l----~~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~N~i~~~~~~~~----- 148 (741)
.+|+.|+|++|.|+......+... ..+|++|+|++|.|.......+ ..+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 359999999999886555554443 1289999999999865433333 346789999999999986555554
Q ss_pred cCCCcCcEEEcccCCCCCc----CcccccCCcccceeeccCccccccc----CcccccCCCCCEEeccCcccccc----C
Q 037916 149 GELQNLVTLAINTNKLSGN----IPPSIGNLKKLLQLYLIENFLQVSI----PSSLGQCQSLTTINLSYNNLSGT----I 216 (741)
Q Consensus 149 ~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~----~ 216 (741)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 3467899999999999753 3445577889999999999987543 55677788999999999999743 3
Q ss_pred CccccccccceeEEEcCCCccCCCCChhhcCCCC-----CcEEE--eccccccc
Q 037916 217 PPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLIN-----LEILF--ISRNMLEC 263 (741)
Q Consensus 217 p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~-----L~~L~--Ls~N~l~~ 263 (741)
...+...++|+. |+|++|.|+......+..+.. |+.+. +..|.+..
T Consensus 232 ~~~L~~~~~L~~-L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 232 ARAAREHPSLEL-LHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HHHHHHCSSCCE-EECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred HHHHHhCCCCCE-EeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 344556688887 999999988554445544322 66777 66776654
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5.2e-13 Score=141.54 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=58.8
Q ss_pred cEEECcCC-cCcccCCchhhcccccccEEEccC-CcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEc
Q 037916 82 KHLDINNN-NFGGLLPGCICNFSITLETLIFNS-NKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAI 159 (741)
Q Consensus 82 ~~L~Ls~N-~l~~~~~~~~~~l~~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 159 (741)
..++++++ +|++ +|. +..+. +|+.|+|++ |+|.++.+..|.+|++|++|+|++|+|+++.+..|.+|++|+.|+|
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~-~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCS-CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCC-CeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45566665 5663 333 55554 566666654 5555555555666666666666666666555555666666666666
Q ss_pred ccCCCCCcCcccccCCcccceeeccCcccc
Q 037916 160 NTNKLSGNIPPSIGNLKKLLQLYLIENFLQ 189 (741)
Q Consensus 160 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 189 (741)
++|+|+++.+..|..++ |+.|+|.+|.+.
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66666554444444444 555555555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1.2e-12 Score=138.83 Aligned_cols=102 Identities=20% Similarity=0.164 Sum_probs=53.2
Q ss_pred EeccCc-cccccCCccccccccceeEEEcCC-CccCCCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCC
Q 037916 205 INLSYN-NLSGTIPPQLMDLTSLSVGLDLSR-NQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGG 282 (741)
Q Consensus 205 L~L~~N-~l~~~~p~~~~~l~~L~~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 282 (741)
++++++ +|+ .+|. +..+++|+. |+|++ |.|++..+..|+.+++|+.|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~-L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTE-LYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSE-EECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeE-EEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 344444 444 3444 445555554 55553 555544445555555555555555555555555555555555555555
Q ss_pred CccCCCCChhcccCccCCeeeCCCCcCC
Q 037916 283 NLFQGPIPLSLSSLRGLRVLDLSQNNIS 310 (741)
Q Consensus 283 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 310 (741)
|+|+++.+..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555554444444444 555555555554
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.32 E-value=1e-10 Score=125.43 Aligned_cols=292 Identities=9% Similarity=0.056 Sum_probs=214.7
Q ss_pred CCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCcCcccCCch
Q 037916 19 TLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGC 98 (741)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 98 (741)
...+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+-..+|.+. + |+.+.+..+ ++.+...+
T Consensus 44 ~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~----------l~~i~~~~~-l~~I~~~a 109 (379)
T 4h09_A 44 DRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-K----------LQSYTGMER-VKKFGDYV 109 (379)
T ss_dssp GGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-C----------CCEEEECTT-CCEECTTT
T ss_pred cccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-C----------CceEECCce-eeEeccce
Confidence 457899999975 488788899999999999999754 776777788765 2 777777644 66566666
Q ss_pred hhcccccccEEEccCCcccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccCCCCC------------
Q 037916 99 ICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSG------------ 166 (741)
Q Consensus 99 ~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~------------ 166 (741)
|.. . +|+.+.+..+ +..+...+|.+. +|+.+.+..+ ++.+...+|....+|+.+.+..+....
T Consensus 110 F~~-~-~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (379)
T 4h09_A 110 FQG-T-DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNK 184 (379)
T ss_dssp TTT-C-CCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTS
T ss_pred ecc-C-CcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceeccccc
Confidence 655 3 7999999765 445556666654 6777776654 566778888888889888887665432
Q ss_pred cCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCChhhc
Q 037916 167 NIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVG 246 (741)
Q Consensus 167 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~ 246 (741)
.....+.....+..+.+..+. .......|....+|+.+.+..+ +.......|.+...|+. +.+..+ ++.+....|.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~-i~lp~~-v~~I~~~aF~ 260 (379)
T 4h09_A 185 TILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDE-IAIPKN-VTSIGSFLLQ 260 (379)
T ss_dssp SEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCE-EEECTT-CCEECTTTTT
T ss_pred ceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceE-EEcCCC-ccEeCccccc
Confidence 122234445556665555443 2355667777888888888765 44466677888888886 888766 5556677888
Q ss_pred CCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhhccccCCcc
Q 037916 247 KLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLVELQLVQNL 326 (741)
Q Consensus 247 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 326 (741)
++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+
T Consensus 261 ~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 261 NCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp TCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred eeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 8889999988654 66677888999999999999888888788888999999999999755 766677888899999998
Q ss_pred cccCcccccc
Q 037916 327 NLSYNDLEGV 336 (741)
Q Consensus 327 ~l~~N~l~~~ 336 (741)
.+..+ ++.+
T Consensus 339 ~ip~~-v~~I 347 (379)
T 4h09_A 339 SYPKS-ITLI 347 (379)
T ss_dssp CCCTT-CCEE
T ss_pred EECCc-cCEE
Confidence 88654 4433
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.29 E-value=2.5e-10 Score=122.33 Aligned_cols=286 Identities=11% Similarity=0.058 Sum_probs=180.7
Q ss_pred cCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCcccCCchhhhhhhhhhccccCCCccEEECcCCc
Q 037916 11 GIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN 90 (741)
Q Consensus 11 ~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~ 90 (741)
.|+...|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.+...+|... +|+.+++..+
T Consensus 59 ~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-----------~L~~i~lp~~- 123 (379)
T 4h09_A 59 SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-----------DLDDFEFPGA- 123 (379)
T ss_dssp EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-----------CCSEEECCTT-
T ss_pred ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-----------CcccccCCCc-
Confidence 566666767777888887654 666777777775 5777766543 554555555432 2777777654
Q ss_pred CcccCCchhhcccccccEEEccCCcccccCCccccCCCCccEEEccccccccc------------CCccccCCCcCcEEE
Q 037916 91 FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT------------ISPAIGELQNLVTLA 158 (741)
Q Consensus 91 l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~------------~~~~~~~l~~L~~L~ 158 (741)
+..+...+|.+- +|+.+.+-.+ +..+....|....+++.+.+..+..... ....+.....+..+.
T Consensus 124 ~~~i~~~~F~~~--~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (379)
T 4h09_A 124 TTEIGNYIFYNS--SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFT 200 (379)
T ss_dssp CCEECTTTTTTC--CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEE
T ss_pred cccccccccccc--eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccc
Confidence 333444555443 4666655543 4456666777777777777665543211 112334444555555
Q ss_pred cccCCCCCcCcccccCCcccceeeccCcccccccCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccC
Q 037916 159 INTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLV 238 (741)
Q Consensus 159 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~ 238 (741)
+..+.-. +...+|....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++......|.+..+++. +.+..+ +.
T Consensus 201 ~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~-i~l~~~-i~ 275 (379)
T 4h09_A 201 IPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT-LNFYAK-VK 275 (379)
T ss_dssp CCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE-EEECCC-CS
T ss_pred cccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc-cccccc-ce
Confidence 5443332 45556677777777777655 44456667777777777777665 55455666777777776 777544 44
Q ss_pred CCCChhhcCCCCCcEEEeccccccchhhhhccccccccEEEeCCCccCCCCChhcccCccCCeeeCCCCcCCCccchhhh
Q 037916 239 GSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLRGLRVLDLSQNNISGEIPKFLV 318 (741)
Q Consensus 239 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 318 (741)
.+....|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~ 353 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFE 353 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhh
Confidence 455567777778888888777777777777877778888877654 66566677777777877777654 5545556666
Q ss_pred ccc
Q 037916 319 ELQ 321 (741)
Q Consensus 319 ~l~ 321 (741)
++.
T Consensus 354 ~c~ 356 (379)
T 4h09_A 354 GSS 356 (379)
T ss_dssp TSS
T ss_pred CCC
Confidence 553
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=1.3e-11 Score=125.15 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=108.7
Q ss_pred HHHHHhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCceEE
Q 037916 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKA 478 (741)
Q Consensus 400 ~~y~~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~ 478 (741)
..|++...++.|+.+.||++... +..+++|+...........+.+|+.+++.+. +..++++++++ ......|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~~~~~~ 86 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----RHDGWSN 86 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEE
T ss_pred ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEE-----ecCCceE
Confidence 45778888888999999999864 6789999986432233457889999999884 66788888884 3455789
Q ss_pred EEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC--------------------------
Q 037916 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC-------------------------- 532 (741)
Q Consensus 479 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------------------------- 532 (741)
+||||++|.++.+.+.. ......++.++++++..||+..
T Consensus 87 lv~e~i~G~~l~~~~~~---------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED---------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp EEEECCSSEEHHHHCCT---------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred EEEEecCCeehhhccCC---------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 99999999998876421 1122467889999999999810
Q ss_pred ------------------------------CCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 533 ------------------------------QPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 533 ------------------------------~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1359999999999999876566799998764
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=6.5e-10 Score=112.31 Aligned_cols=128 Identities=17% Similarity=0.076 Sum_probs=92.6
Q ss_pred ccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCc--eeeEeeeecCccccCCceEEEEEecccC
Q 037916 409 DMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKN--LVKILTVCSGVDYKGDDFKALVYEFMHN 486 (741)
Q Consensus 409 g~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~lv~e~~~~ 486 (741)
+.|..+.||++... +|..+++|+.... ....+.+|+.+++.+.+.+ +++++++. ..+...++||||++|
T Consensus 29 ~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGRDWLLLGEVPG 99 (264)
T ss_dssp CTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSCEEEEEECCSS
T ss_pred cCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCCCCCEEEEEecCC
Confidence 35666999999764 5778999997532 3356789999999885434 55688773 334568999999999
Q ss_pred CChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 037916 487 GSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC---------------------------------- 532 (741)
Q Consensus 487 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---------------------------------- 532 (741)
.++. ... .+ ...++.++++.|..||+..
T Consensus 100 ~~l~--~~~-------------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 100 QDLL--SSH-------------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EETT--TSC-------------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred cccC--cCc-------------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 8884 211 01 1246777788888888641
Q ss_pred ---------------------CCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 533 ---------------------QPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 533 ---------------------~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999874
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=2.2e-10 Score=120.83 Aligned_cols=203 Identities=17% Similarity=0.168 Sum_probs=108.4
Q ss_pred cccEEEccCCcccc-c-------CCccccCCCCccEEEcccccccc---------cCCccccCCCcCcEEEcccCC-CCC
Q 037916 105 TLETLIFNSNKIFR-S-------IPAGIGKFINLQTLHMWDNQLSG---------TISPAIGELQNLVTLAINTNK-LSG 166 (741)
Q Consensus 105 ~L~~L~L~~n~i~~-~-------~~~~~~~l~~L~~L~L~~N~i~~---------~~~~~~~~l~~L~~L~L~~N~-l~~ 166 (741)
.++.|.+......+ . +..+...+++|+.|.+..+.... .+...+..+++|+.|+|++|. +.
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~- 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS- 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-
Confidence 46677777654321 1 12224456677777776543210 122334555666666666652 21
Q ss_pred cCcccccCCcccceeeccCcccccccCcccc--cCCCCCEEeccCc--cccccCCccccccccceeEEEcCCCccCCCCC
Q 037916 167 NIPPSIGNLKKLLQLYLIENFLQVSIPSSLG--QCQSLTTINLSYN--NLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLP 242 (741)
Q Consensus 167 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N--~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p 242 (741)
++. +. +++|++|+|..|.+.......+. .+++|++|+|+.+ ...+. ..+..+.
T Consensus 187 -l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~--~~~~~l~------------------ 243 (362)
T 2ra8_A 187 -IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFD--GDMNVFR------------------ 243 (362)
T ss_dssp -CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCC--SCGGGTG------------------
T ss_pred -ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccc--hhHHHHH------------------
Confidence 121 22 55666666665555433222332 4555665555421 11100 0000000
Q ss_pred hhh--cCCCCCcEEEeccccccchhhhhcc---ccccccEEEeCCCccCCCC----ChhcccCccCCeeeCCCCcCCCcc
Q 037916 243 TEV--GKLINLEILFISRNMLECEILSTLG---SCIKLEQLKLGGNLFQGPI----PLSLSSLRGLRVLDLSQNNISGEI 313 (741)
Q Consensus 243 ~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (741)
..+ ..+++|++|+|++|.+.......+. .+++|++|+|+.|.|.+.. +..+..+++|+.|+|++|.|+...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 111 2467888888888888754433332 4788999999888887643 233356788999999988877433
Q ss_pred chhhhccccCCcccccCcc
Q 037916 314 PKFLVELQLVQNLNLSYND 332 (741)
Q Consensus 314 ~~~~~~l~~L~~L~l~~N~ 332 (741)
-..+...- ...+++++|+
T Consensus 324 ~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 324 KKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHc-CCEEEecCCc
Confidence 33333210 2567888776
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=2.8e-10 Score=119.95 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=46.0
Q ss_pred ccccCCCCccEEEccccc-ccccCCccccCCCcCcEEEcccCCCCCcCccccc--CCcccceeeccC--cccccc-----
Q 037916 122 AGIGKFINLQTLHMWDNQ-LSGTISPAIGELQNLVTLAINTNKLSGNIPPSIG--NLKKLLQLYLIE--NFLQVS----- 191 (741)
Q Consensus 122 ~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~i~~~----- 191 (741)
..+..+++|+.|+|++|. ++ .. . +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+.
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~-l~-~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS-IG-K-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB-CC-S-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCce-ec-c-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 344556677777776663 22 21 1 32 66777777777766543333333 567777777653 221110
Q ss_pred cCccc--ccCCCCCEEeccCcccc
Q 037916 192 IPSSL--GQCQSLTTINLSYNNLS 213 (741)
Q Consensus 192 ~~~~~--~~l~~L~~L~L~~N~l~ 213 (741)
+...+ ..+++|++|+|.+|.+.
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~ 265 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQ 265 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCc
Confidence 00111 13566666666666665
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=2.2e-09 Score=113.94 Aligned_cols=145 Identities=12% Similarity=0.117 Sum_probs=104.3
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEee--ccCc-CcchhHHHHHHHHHhcC--CCceeeEeeeecCccccCCceEEE
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLN--LLHH-GASKSSIAECSALRNIR--HKNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~~~~~~l 479 (741)
++.|+.|.++.||+.... +..+++|+.. .... .....+.+|+.+++.+. +..+++++.++.+.. .....|+
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeEE
Confidence 457899999999999875 4578888765 3221 22457788999999886 455788888864321 1135789
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC--------------------------- 532 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------------- 532 (741)
||||++|.++.+... ..++..+...++.+++++|+.||+..
T Consensus 119 vme~v~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSL------------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQY 186 (359)
T ss_dssp EEECCCCBCCCCTTC------------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHH
T ss_pred EEEecCCeecCCCcc------------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHH
Confidence 999999877754221 23567778889999999999999731
Q ss_pred ----------------------------CCCceecCCCCCCeEeCCCCc--eEEeeccccccc
Q 037916 533 ----------------------------QPTTAHCDLKPSNVLLDHEMT--AHVADFGLAKLL 565 (741)
Q Consensus 533 ----------------------------~~~ivHrDlkp~NIll~~~~~--~kL~DFg~a~~~ 565 (741)
.+.++|+|++|.||+++.++. +.|+||+.+...
T Consensus 187 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 187 KLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999987753 689999988643
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.73 E-value=3e-09 Score=110.12 Aligned_cols=190 Identities=16% Similarity=0.115 Sum_probs=117.8
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhc-CCCc--eeeEeeeecCccccCCceEEEEE
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-RHKN--LVKILTVCSGVDYKGDDFKALVY 481 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpn--Iv~~~~~~~~~~~~~~~~~~lv~ 481 (741)
++.++.|.+..||+.. ..+++|+.... .....+.+|+.+++.+ .+.. +.+++..... .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 3458889999999864 34888986422 2345678899999887 3322 4455554211 01112458999
Q ss_pred ecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhc------------------------------
Q 037916 482 EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHD------------------------------ 531 (741)
Q Consensus 482 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~------------------------------ 531 (741)
|+++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988765321 2355666677788888888888861
Q ss_pred -------------------------CCCCceecCCCCCCeEeCC--CCceEEeecccccccCCCCcccccccc---cccc
Q 037916 532 -------------------------CQPTTAHCDLKPSNVLLDH--EMTAHVADFGLAKLLPPAHLQTSSIGV---KGTI 581 (741)
Q Consensus 532 -------------------------~~~~ivHrDlkp~NIll~~--~~~~kL~DFg~a~~~~~~~~~~~~~~~---~gt~ 581 (741)
..+.++|+|++|.||++++ ...+.|+||+.+............... .+..
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1135899999999999988 456889999998764332110000000 0000
Q ss_pred -------cc--cC-cccccCCCCCCCccCchhHHHHHHHHHcCCCCC
Q 037916 582 -------GY--IA-PAEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618 (741)
Q Consensus 582 -------~y--~a-PEe~~~~~~~~~~~DIwSlG~il~elltg~~p~ 618 (741)
.| .. | ++. .......+.|++|.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~-~~~--~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIP-TVL--EKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHH-HHH--HHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcH-HHH--HHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01 11 1 000 00112258999999999999998875
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=1.6e-08 Score=100.90 Aligned_cols=62 Identities=26% Similarity=0.235 Sum_probs=26.1
Q ss_pred CCCCcEEEeccccccchh--hhhccccccccEEEeCCCccCCCCChhcccCc--cCCeeeCCCCcCCC
Q 037916 248 LINLEILFISRNMLECEI--LSTLGSCIKLEQLKLGGNLFQGPIPLSLSSLR--GLRVLDLSQNNISG 311 (741)
Q Consensus 248 l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~ 311 (741)
+++|+.|+|++|+|+++. +..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 344444444444444321 23334444444444444444432 1122222 45555555555543
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.47 E-value=2.5e-07 Score=96.28 Aligned_cols=133 Identities=18% Similarity=0.168 Sum_probs=94.5
Q ss_pred HhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCC----CceeeEeeeecCccccCCceEEE
Q 037916 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRH----KNLVKILTVCSGVDYKGDDFKAL 479 (741)
Q Consensus 404 ~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----pnIv~~~~~~~~~~~~~~~~~~l 479 (741)
-++.++.|....||+. +..+++|+... ......+.+|..+++.+.+ ..+.+++++ ...++
T Consensus 41 ~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~~~l 104 (320)
T 3r70_A 41 ELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SDRFN 104 (320)
T ss_dssp CEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CSSCE
T ss_pred EEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CCcEE
Confidence 4567899999999998 44588888642 1223467889998888865 234455544 24589
Q ss_pred EEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCC--------------------------
Q 037916 480 VYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQ-------------------------- 533 (741)
Q Consensus 480 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~-------------------------- 533 (741)
||||++|.++..... ..++..+...++.++++.+..||+...
T Consensus 105 vme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (320)
T 3r70_A 105 IMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLI 172 (320)
T ss_dssp EEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHH
T ss_pred EEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHH
Confidence 999999988764321 124555666777777777777775421
Q ss_pred ----------------------------------CCceecCCCCCCeEeCCCCceEEeecccccc
Q 037916 534 ----------------------------------PTTAHCDLKPSNVLLDHEMTAHVADFGLAKL 564 (741)
Q Consensus 534 ----------------------------------~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~ 564 (741)
+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 173 SILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998864
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=4.7e-08 Score=92.84 Aligned_cols=121 Identities=14% Similarity=0.169 Sum_probs=55.8
Q ss_pred CcccccCCCCCEEeccCc-ccccc----CCccccccccceeEEEcCCCccCCCCChhhcCCCCCcEEEeccccccchhhh
Q 037916 193 PSSLGQCQSLTTINLSYN-NLSGT----IPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILS 267 (741)
Q Consensus 193 ~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 267 (741)
...+...++|++|+|++| .|... +...+...++|++ |+|++|.|...... ....
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~-L~Ls~n~i~~~g~~--------------------~l~~ 87 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKK-FSIVGTRSNDPVAF--------------------ALAE 87 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCE-EECTTSCCCHHHHH--------------------HHHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCE-EECcCCCCChHHHH--------------------HHHH
Confidence 344556677777777777 66521 1222333344444 55555554321100 1122
Q ss_pred hccccccccEEEeCCCccCCC----CChhcccCccCCeeeC--CCCcCCCc----cchhhhccccCCcccccCcccc
Q 037916 268 TLGSCIKLEQLKLGGNLFQGP----IPLSLSSLRGLRVLDL--SQNNISGE----IPKFLVELQLVQNLNLSYNDLE 334 (741)
Q Consensus 268 ~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 334 (741)
.+...++|++|+|++|.|... +..++...+.|++|+| ++|.|... +...+...+.|+.|+|++|.+.
T Consensus 88 ~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 88 MLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 223334455555555554432 1233344455555555 55555432 2223333455555666555554
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=4.1e-08 Score=93.24 Aligned_cols=122 Identities=12% Similarity=0.088 Sum_probs=73.4
Q ss_pred CcccccCCcccceeeccCc-ccccc----cCcccccCCCCCEEeccCccccccCCccccccccceeEEEcCCCccCCCCC
Q 037916 168 IPPSIGNLKKLLQLYLIEN-FLQVS----IPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLP 242 (741)
Q Consensus 168 ~~~~~~~l~~L~~L~L~~N-~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p 242 (741)
+...+...++|++|+|++| .|... +...+...++|++|+|++|+|.......+ .
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l---------------------~ 86 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFAL---------------------A 86 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHH---------------------H
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHH---------------------H
Confidence 3456677899999999999 88743 34456667899999999999974211111 1
Q ss_pred hhhcCCCCCcEEEeccccccch----hhhhccccccccEEEe--CCCccCCCC----ChhcccCccCCeeeCCCCcCC
Q 037916 243 TEVGKLINLEILFISRNMLECE----ILSTLGSCIKLEQLKL--GGNLFQGPI----PLSLSSLRGLRVLDLSQNNIS 310 (741)
Q Consensus 243 ~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 310 (741)
..+...++|++|+|++|.|... ....+...++|++|+| ++|.|.... ...+...++|+.|+|++|.+.
T Consensus 87 ~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 87 EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1222333444444444444432 2334444555666666 556665432 233444567777777777764
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=5.7e-08 Score=97.02 Aligned_cols=79 Identities=34% Similarity=0.361 Sum_probs=41.6
Q ss_pred cccceeEEEcCCCccCCC--CChhhcCCCCCcEEEeccccccch-hhhhccccccccEEEeCCCccCCCCC-------hh
Q 037916 223 LTSLSVGLDLSRNQLVGS--LPTEVGKLINLEILFISRNMLECE-ILSTLGSCIKLEQLKLGGNLFQGPIP-------LS 292 (741)
Q Consensus 223 l~~L~~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~-------~~ 292 (741)
+++|+. |+|++|+|++. +|..+..+++|+.|+|++|+|++. ....+..+ +|++|+|++|.+.+..| ..
T Consensus 169 l~~L~~-L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLS-LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCE-EECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCE-EECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHH
Confidence 334443 44444444431 234445556666666666666544 11222223 67777777777665444 23
Q ss_pred cccCccCCeee
Q 037916 293 LSSLRGLRVLD 303 (741)
Q Consensus 293 ~~~l~~L~~L~ 303 (741)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 56677777775
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=1.5e-06 Score=87.96 Aligned_cols=135 Identities=17% Similarity=0.103 Sum_probs=92.9
Q ss_pred hcccCcee-eEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCceEEEEEecc
Q 037916 407 WIDMGSFG-SVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKALVYEFM 484 (741)
Q Consensus 407 ~ig~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~lv~e~~ 484 (741)
.+..|..+ .||+.....++..+++|+-.. .....+.+|...|+.+. +--|.++++++ .+.+..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~-----~~~~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFI-----RTPDDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEE-----EECCeEEEEEEee
Confidence 45556655 689988877778899998753 23456778999988773 32366777774 3345789999999
Q ss_pred cCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------
Q 037916 485 HNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDC-------------------------------- 532 (741)
Q Consensus 485 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------------------------------- 532 (741)
+|.++.+.... .......+..++++.|.-||+..
T Consensus 103 ~G~~~~~~~~~--------------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (272)
T 4gkh_A 103 PGKTAFQVLEE--------------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFD 168 (272)
T ss_dssp CSEEHHHHHHH--------------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCC
T ss_pred CCccccccccC--------------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcc
Confidence 98877665421 11122345556666666666420
Q ss_pred -----------------------CCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 533 -----------------------QPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 533 -----------------------~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 169 DERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp GGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237899999999999987777799998775
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.32 E-value=1.9e-06 Score=87.73 Aligned_cols=75 Identities=15% Similarity=0.007 Sum_probs=58.4
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCC---ceeeEeeeecCccccCCceEEEEE
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK---NLVKILTVCSGVDYKGDDFKALVY 481 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~~~~~~~~~~~~~~~~~~lv~ 481 (741)
.+.|+.|.++.||+++.. +|+.+++|+...........+..|+..++.+.+. .+++++++. ..++||
T Consensus 20 ~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lvm 89 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLAM 89 (288)
T ss_dssp EEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEEE
T ss_pred eeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEEE
Confidence 456899999999999875 6788999997543333346789999999999764 577888762 258999
Q ss_pred ecccCCCh
Q 037916 482 EFMHNGSL 489 (741)
Q Consensus 482 e~~~~gsL 489 (741)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998764
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=2e-06 Score=88.65 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=88.3
Q ss_pred hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCC---ceeeEeeeecCccccCCceEEEEEe
Q 037916 406 CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK---NLVKILTVCSGVDYKGDDFKALVYE 482 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~~~~~~~~~~~~~~~~~~lv~e 482 (741)
+.++.|....||+. +..+++|+.. .......+.+|..+++.+.+. .|.+++.++. ......++|||
T Consensus 25 ~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEEE
T ss_pred eecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEEe
Confidence 45778888899988 3457888853 122345778999999998642 3566666642 22345789999
Q ss_pred cccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhc-------------------------------
Q 037916 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHD------------------------------- 531 (741)
Q Consensus 483 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~------------------------------- 531 (741)
|++|.++.+..- ..++..+...++.++.+.|..||+.
T Consensus 94 ~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~ 161 (306)
T 3tdw_A 94 KVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVF 161 (306)
T ss_dssp CCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTG
T ss_pred ccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcc
Confidence 999988765311 1123333344444444444444432
Q ss_pred --------------------------CCCCceecCCCCCCeEeCC---CCc-eEEeeccccc
Q 037916 532 --------------------------CQPTTAHCDLKPSNVLLDH---EMT-AHVADFGLAK 563 (741)
Q Consensus 532 --------------------------~~~~ivHrDlkp~NIll~~---~~~-~kL~DFg~a~ 563 (741)
..+.++|+|++|.||+++. ++. +.|+||+.+.
T Consensus 162 ~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 162 PLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp GGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred cccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2335799999999999987 455 4899999775
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=1e-05 Score=85.39 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=54.1
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCc--eeeEeeeecCccccCCceEEEEEe
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKN--LVKILTVCSGVDYKGDDFKALVYE 482 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~lv~e 482 (741)
++.++.|....+|+... ++..+++|+... ...+..|..+++.+.... +.+++.++.. .....|+|||
T Consensus 46 i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~-----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~lv~e 114 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV--GGRGYVLRVNSC-----ADGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYCISR 114 (362)
T ss_dssp EEEEEECSSEEEEEEEE--TTEEEEEEEESC-----CHHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEEEEE
T ss_pred EEECCCCCcceEEEEEE--CCcEEEEEeCCc-----hhhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEEEEE
Confidence 45688899999999886 478899998742 235888999998885433 4566665421 2246799999
Q ss_pred cccCCChh
Q 037916 483 FMHNGSLE 490 (741)
Q Consensus 483 ~~~~gsL~ 490 (741)
|++|.++.
T Consensus 115 ~l~G~~l~ 122 (362)
T 3ovc_A 115 RAQGVTLQ 122 (362)
T ss_dssp CCCSEETT
T ss_pred ecCCCCcc
Confidence 99886664
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.07 E-value=1.6e-05 Score=83.94 Aligned_cols=84 Identities=5% Similarity=-0.063 Sum_probs=55.3
Q ss_pred hhc-ccCceeeEEEEEEc---C---CCeEEEEEEeeccC---cCcchhHHHHHHHHHhcC-C--CceeeEeeeecCcccc
Q 037916 406 CWI-DMGSFGSVYKGILD---E---GKTIIAVKVLNLLH---HGASKSSIAECSALRNIR-H--KNLVKILTVCSGVDYK 472 (741)
Q Consensus 406 ~~i-g~G~~g~V~~a~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--pnIv~~~~~~~~~~~~ 472 (741)
+.| +.|....+|+.... . ++..+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-- 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-- 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST--
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC--
Confidence 456 88889999988753 1 15678899865322 112356788999988873 2 35677887753221
Q ss_pred CCceEEEEEecccCCChhh
Q 037916 473 GDDFKALVYEFMHNGSLEE 491 (741)
Q Consensus 473 ~~~~~~lv~e~~~~gsL~~ 491 (741)
.....++||||++|.++.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 1134689999998877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=2e-05 Score=84.42 Aligned_cols=76 Identities=14% Similarity=0.034 Sum_probs=49.2
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCc-------CcchhHHHHHHHHHhcCC--C-ceeeEeeeecCccccCC
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHH-------GASKSSIAECSALRNIRH--K-NLVKILTVCSGVDYKGD 474 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~~ 474 (741)
.+.||.|.++.||++....+++.|++|....... ....+...|.++++.+.. | .+++++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4579999999999997765677899998653211 123456789999887732 3 445666541 2
Q ss_pred ceEEEEEecccCC
Q 037916 475 DFKALVYEFMHNG 487 (741)
Q Consensus 475 ~~~~lv~e~~~~g 487 (741)
...++|||++++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2357999999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.94 E-value=4.2e-06 Score=77.34 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=47.5
Q ss_pred CccEEEcccccccccCCccccCCCcCcEEEcccCC-CCCcCcccccCC----cccceeeccCcc-cccccCcccccCCCC
Q 037916 129 NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNK-LSGNIPPSIGNL----KKLLQLYLIENF-LQVSIPSSLGQCQSL 202 (741)
Q Consensus 129 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~~~~~~l~~L 202 (741)
+|++|||+++.|+......+.++++|+.|+|++|. |+..--..++.+ ++|++|+|++|. |+...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56666666666655555555666666666666663 543333334443 256666666653 554434445566777
Q ss_pred CEEeccCcc
Q 037916 203 TTINLSYNN 211 (741)
Q Consensus 203 ~~L~L~~N~ 211 (741)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777663
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=7.1e-06 Score=75.83 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=52.9
Q ss_pred cceeEEEcCCCccCCCCChhhcCCCCCcEEEecccc-ccchhhhhcccc----ccccEEEeCCC-ccCCCCChhcccCcc
Q 037916 225 SLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNM-LECEILSTLGSC----IKLEQLKLGGN-LFQGPIPLSLSSLRG 298 (741)
Q Consensus 225 ~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 298 (741)
.|+. ||++++.|+..--..+..+++|++|+|++|. |+......++.+ ++|++|+|++| +|++..-..+..+++
T Consensus 62 ~L~~-LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQA-IDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEE-EEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeE-EeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 4554 6666666654444455667777777777773 665555555554 36777777776 366544455666777
Q ss_pred CCeeeCCCCc
Q 037916 299 LRVLDLSQNN 308 (741)
Q Consensus 299 L~~L~Ls~N~ 308 (741)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76 E-value=0.00019 Score=74.89 Aligned_cols=151 Identities=20% Similarity=0.150 Sum_probs=79.0
Q ss_pred hcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC--CCceeeEeeeecCcc-ccCCceEEEEEec
Q 037916 407 WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR--HKNLVKILTVCSGVD-YKGDDFKALVYEF 483 (741)
Q Consensus 407 ~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~-~~~~~~~~lv~e~ 483 (741)
.|+.|..+.||+.... ++ .+++|+... .......|..+++.+. .-.+++++....+.. .......+++|||
T Consensus 39 ~l~gG~~n~~~~v~~~-~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTD-SG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEET-TE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeC-CC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566778899999875 33 588999863 1234445666665552 113344443211100 1124467899999
Q ss_pred ccCCChhh--------------hccCCCC-C--Cccc-CcccccCHHH-------------------------------H
Q 037916 484 MHNGSLEE--------------WLHPVSG-A--DKTV-EAPKCLNFLQ-------------------------------R 514 (741)
Q Consensus 484 ~~~gsL~~--------------~l~~~~~-~--~~~~-~~~~~~~~~~-------------------------------~ 514 (741)
++|.++.. .++.... . .... .......|.. .
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 98865420 0111000 0 0000 0000111211 1
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 515 INIAIDVACALKYLHH----------DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 515 ~~i~~qi~~aL~~LH~----------~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
..+..++..++.+|++ .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1122234456666653 124589999999999999888899999998764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.0005 Score=70.44 Aligned_cols=74 Identities=12% Similarity=0.040 Sum_probs=55.2
Q ss_pred hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcC---CCceeeEeeeecCccccCCceEEEEEe
Q 037916 406 CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR---HKNLVKILTVCSGVDYKGDDFKALVYE 482 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~~~~~~lv~e 482 (741)
+.|+.|.+..+|+... ++..+++|+.... ....+..|...|+.+. ...|++++.++. .....++|||
T Consensus 42 ~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEEEE
T ss_pred EEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEEEE
Confidence 4688999999999986 3667888987532 3456788988888873 356778887742 2357899999
Q ss_pred cccCCCh
Q 037916 483 FMHNGSL 489 (741)
Q Consensus 483 ~~~~gsL 489 (741)
|++|..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9988754
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.47 E-value=0.00037 Score=70.87 Aligned_cols=75 Identities=15% Similarity=0.007 Sum_probs=54.0
Q ss_pred HhhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCC---CceeeEeeeecCccccCCceEEEE
Q 037916 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRH---KNLVKILTVCSGVDYKGDDFKALV 480 (741)
Q Consensus 404 ~~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~~~~~~~~~~~lv 480 (741)
-++.+|.|..+.||+.+.. +|+.|++|+...........+..|+..|+.+.- --+++++++. ..++|
T Consensus 19 ~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~~lv 88 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred EEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------CceEE
Confidence 3567899999999999986 688899998764433344567889999988732 2355666552 23789
Q ss_pred EecccCCC
Q 037916 481 YEFMHNGS 488 (741)
Q Consensus 481 ~e~~~~gs 488 (741)
|||++++.
T Consensus 89 ~e~l~~~~ 96 (288)
T 3f7w_A 89 MEWVDERP 96 (288)
T ss_dssp EECCCCCC
T ss_pred EEeecccC
Confidence 99987654
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.32 E-value=5.7e-05 Score=71.14 Aligned_cols=86 Identities=13% Similarity=0.172 Sum_probs=37.0
Q ss_pred CCCccEEEcccccccccC----CccccCCCcCcEEEcccCCCCCcC----cccccCCcccceeeccCcc---ccc----c
Q 037916 127 FINLQTLHMWDNQLSGTI----SPAIGELQNLVTLAINTNKLSGNI----PPSIGNLKKLLQLYLIENF---LQV----S 191 (741)
Q Consensus 127 l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~---i~~----~ 191 (741)
-+.|++|+|++|+|.... ..++..-+.|++|+|++|+|+..- .+++..-+.|++|+|++|. +.. .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 344555555555554222 222333445555555555554321 1223333445555554432 221 1
Q ss_pred cCcccccCCCCCEEeccCccc
Q 037916 192 IPSSLGQCQSLTTINLSYNNL 212 (741)
Q Consensus 192 ~~~~~~~l~~L~~L~L~~N~l 212 (741)
+...+..-+.|+.|+++.|.+
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCCcCeEeccCCCc
Confidence 222333445555555555443
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.31 E-value=0.00016 Score=63.69 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=26.6
Q ss_pred CCCccc-ccCChhhhhCCCCCcEEEcccCcccccCCccCCCCCCCcEEEeecCcCc
Q 037916 4 GVNRVQ-GGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLT 58 (741)
Q Consensus 4 ~~n~~~-~~ip~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 58 (741)
+++.++ ..+|..+. ++|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 16 s~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 16 GRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 344443 24454444 44555555555555555555555555555555555443
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.28 E-value=5.7e-05 Score=71.12 Aligned_cols=84 Identities=17% Similarity=0.123 Sum_probs=42.0
Q ss_pred cccEEEccCCcccccC----CccccCCCCccEEEcccccccccC----CccccCCCcCcEEEcccC---CCCCc----Cc
Q 037916 105 TLETLIFNSNKIFRSI----PAGIGKFINLQTLHMWDNQLSGTI----SPAIGELQNLVTLAINTN---KLSGN----IP 169 (741)
Q Consensus 105 ~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N---~l~~~----~~ 169 (741)
.|+.|+|++|+|.... ...+..-+.|++|+|++|+|+... ..++..-+.|++|+|++| .+... +.
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia 150 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM 150 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHH
Confidence 4555555555543221 122223445666666666665322 223444455777777654 23221 22
Q ss_pred ccccCCcccceeeccCccc
Q 037916 170 PSIGNLKKLLQLYLIENFL 188 (741)
Q Consensus 170 ~~~~~l~~L~~L~L~~N~i 188 (741)
.++..-+.|+.|+++.|.+
T Consensus 151 ~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 151 MAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCCcCeEeccCCCc
Confidence 3444556677777766654
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.00098 Score=68.16 Aligned_cols=71 Identities=11% Similarity=0.071 Sum_probs=43.6
Q ss_pred hhhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCce-eeEeeeecCccccCCceEEEEEec
Q 037916 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL-VKILTVCSGVDYKGDDFKALVYEF 483 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~lv~e~ 483 (741)
++.|+.|....+|+. ..+++|+...... ...+..+|+.+++.+....+ .++++++ ...-++++||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEEee
Confidence 456888999999999 3488898764322 22344578888777632222 4666552 1124789999
Q ss_pred c-cCCCh
Q 037916 484 M-HNGSL 489 (741)
Q Consensus 484 ~-~~gsL 489 (741)
+ +|.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 66544
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.19 E-value=0.00049 Score=60.48 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=24.3
Q ss_pred CccEEEcccccccccCCccccCCCcCcEEEcccCCCC
Q 037916 129 NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLS 165 (741)
Q Consensus 129 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 165 (741)
+|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666666666666666666666666666666666664
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.17 E-value=0.0025 Score=68.91 Aligned_cols=74 Identities=16% Similarity=0.054 Sum_probs=48.1
Q ss_pred hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCce-eeEeeeecCccccCCceEEEEEecc
Q 037916 406 CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL-VKILTVCSGVDYKGDDFKALVYEFM 484 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~lv~e~~ 484 (741)
+.|+.|-...+|++....++..|++|+..... ...-+..+|..+++.+...++ +++++++ .+ ..||||+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~-----~~----G~v~e~I 183 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFF-----TN----GRIEEFM 183 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEE-----TT----EEEEECC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEe-----CC----eEEEEee
Confidence 45778888999999886445788999875322 222234689999988854433 5777763 21 2599999
Q ss_pred cCCCh
Q 037916 485 HNGSL 489 (741)
Q Consensus 485 ~~gsL 489 (741)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87554
No 436
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.13 E-value=0.00065 Score=73.18 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=46.2
Q ss_pred CCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCcccccC--CCCCCCccCchhHHHHHHH
Q 037916 533 QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGL--GSEVSINGDVYSYGILLLE 610 (741)
Q Consensus 533 ~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPEe~~~--~~~~~~~~DIwSlG~il~e 610 (741)
.+.++|+|++|.||+++.++ ++++||+.+............. ..-...|++|+.... +.......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH-HHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998776 9999999887543221100000 001134555522210 0111122345577777777
Q ss_pred HHcCC
Q 037916 611 LMTRK 615 (741)
Q Consensus 611 lltg~ 615 (741)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.07 E-value=0.0021 Score=66.24 Aligned_cols=154 Identities=14% Similarity=0.047 Sum_probs=79.3
Q ss_pred hhcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCc--eeeEeeeecCcc-ccCCceEEEEEe
Q 037916 406 CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKN--LVKILTVCSGVD-YKGDDFKALVYE 482 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~~~~~~~~~~-~~~~~~~~lv~e 482 (741)
+.|+.|....+|+.... ++ .+++|+.... ...+.+..|+.+++.+.... +.+++....+.. ....+..+++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 45677888899998875 33 5889988642 23455667888877763211 344443211000 011245689999
Q ss_pred cccCCChhhh--------------ccCC-CCCCccc-CcccccCHHHHHH------------HHHHHHHHHHHHHhc---
Q 037916 483 FMHNGSLEEW--------------LHPV-SGADKTV-EAPKCLNFLQRIN------------IAIDVACALKYLHHD--- 531 (741)
Q Consensus 483 ~~~~gsL~~~--------------l~~~-~~~~~~~-~~~~~~~~~~~~~------------i~~qi~~aL~~LH~~--- 531 (741)
|++|..+... ++.. ....... .......|..... +...+.+.+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 9988654210 1110 0000000 0000011211000 011234455555532
Q ss_pred -CCCCceecCCCCCCeEeCCCCceEEeeccccc
Q 037916 532 -CQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563 (741)
Q Consensus 532 -~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~ 563 (741)
...+++|+|+.+.||++++++.+.|+||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13479999999999999887666899998764
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.02 E-value=0.0017 Score=69.90 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=49.2
Q ss_pred hhhcccCceeeEEEEEEcC-------CCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCce
Q 037916 405 LCWIDMGSFGSVYKGILDE-------GKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~ 476 (741)
++.|+.|....+|++.... ++..|++|+.... ...+.+..|..+++.+. +.-.+++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 3467888889999998752 2567899988421 11155668998888874 32235677653 22
Q ss_pred EEEEEecccCCCh
Q 037916 477 KALVYEFMHNGSL 489 (741)
Q Consensus 477 ~~lv~e~~~~gsL 489 (741)
.+||||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986444
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.96 E-value=0.0011 Score=69.71 Aligned_cols=148 Identities=12% Similarity=0.132 Sum_probs=81.1
Q ss_pred hhcccCceeeEEEEEEcC-------CCeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCceE
Q 037916 406 CWIDMGSFGSVYKGILDE-------GKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFK 477 (741)
Q Consensus 406 ~~ig~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~ 477 (741)
+.|..|-...+|++.... +++.|++|+.... ........+|..+++.+. +.-..++++++ ++
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~---- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVF-----PE---- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT----
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC----
Confidence 346778888999998742 3467899986321 123455668999988773 32235777663 22
Q ss_pred EEEEecccCCChhhh-cc-------------CCCCCCcccCcccccCHHHHHHHHHHHHH-------------------H
Q 037916 478 ALVYEFMHNGSLEEW-LH-------------PVSGADKTVEAPKCLNFLQRINIAIDVAC-------------------A 524 (741)
Q Consensus 478 ~lv~e~~~~gsL~~~-l~-------------~~~~~~~~~~~~~~~~~~~~~~i~~qi~~-------------------a 524 (741)
.+||||++|.++..- +. ...............-+.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 289999988655321 00 00000000000011113444444443321 2
Q ss_pred HHHHHh----c-CCCCceecCCCCCCeEeCCC----CceEEeeccccc
Q 037916 525 LKYLHH----D-CQPTTAHCDLKPSNVLLDHE----MTAHVADFGLAK 563 (741)
Q Consensus 525 L~~LH~----~-~~~~ivHrDlkp~NIll~~~----~~~kL~DFg~a~ 563 (741)
+.+|.+ . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 333322 1 12369999999999999876 689999998764
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.82 E-value=0.0061 Score=63.18 Aligned_cols=32 Identities=34% Similarity=0.336 Sum_probs=27.4
Q ss_pred CCCceecCCCCCCeEeCCC----CceEEeecccccc
Q 037916 533 QPTTAHCDLKPSNVLLDHE----MTAHVADFGLAKL 564 (741)
Q Consensus 533 ~~~ivHrDlkp~NIll~~~----~~~kL~DFg~a~~ 564 (741)
...++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6899999998764
No 441
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.79 E-value=0.0035 Score=64.82 Aligned_cols=79 Identities=10% Similarity=0.076 Sum_probs=47.5
Q ss_pred hcccCceeeEEEEEEcCCCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCC--ceeeEeeeecCcc-ccCCceEEEEEec
Q 037916 407 WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK--NLVKILTVCSGVD-YKGDDFKALVYEF 483 (741)
Q Consensus 407 ~ig~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~~~~~~~~~~-~~~~~~~~lv~e~ 483 (741)
.++ |....||+.... +|+.+++|+..... .....+..|..+++.+... .+++++.. .+.. ....+..+++|||
T Consensus 33 ~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~-~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF-NGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB-TTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec-CCcEEEEECCEEEEEEEe
Confidence 455 777889987664 45678999986321 2345667788888777321 24444443 1110 1123466889999
Q ss_pred ccCCCh
Q 037916 484 MHNGSL 489 (741)
Q Consensus 484 ~~~gsL 489 (741)
++|.++
T Consensus 109 i~G~~~ 114 (328)
T 1zyl_A 109 VGGRQF 114 (328)
T ss_dssp CCCEEC
T ss_pred cCCCCC
Confidence 987543
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.74 E-value=0.0045 Score=65.23 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=44.4
Q ss_pred hhhcccCceeeEEEEEEcC--------CCeEEEEEEeeccCcCcchhHHHHHHHHHhcCCCc-eeeEeeeecCccccCCc
Q 037916 405 LCWIDMGSFGSVYKGILDE--------GKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKN-LVKILTVCSGVDYKGDD 475 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~~~~~~~~~~~~~~~ 475 (741)
++.|+.|..-.+|+..... .+..+++|+...... ...+...|..+++.+...+ ++++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~--- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N--- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T---
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C---
Confidence 3457778888999998753 126788998753221 1223467888888774222 44666552 1
Q ss_pred eEEEEEecccCCCh
Q 037916 476 FKALVYEFMHNGSL 489 (741)
Q Consensus 476 ~~~lv~e~~~~gsL 489 (741)
-++||||++|.++
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.40 E-value=0.019 Score=59.63 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=27.5
Q ss_pred CCceecCCCCCCeEeCCCCceEEeecccccc
Q 037916 534 PTTAHCDLKPSNVLLDHEMTAHVADFGLAKL 564 (741)
Q Consensus 534 ~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~ 564 (741)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.99 E-value=0.028 Score=59.38 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=26.2
Q ss_pred CCceecCCCCCCeEeCCC------CceEEeeccccc
Q 037916 534 PTTAHCDLKPSNVLLDHE------MTAHVADFGLAK 563 (741)
Q Consensus 534 ~~ivHrDlkp~NIll~~~------~~~kL~DFg~a~ 563 (741)
..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 368999999999999876 789999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.76 E-value=0.036 Score=59.12 Aligned_cols=75 Identities=15% Similarity=0.115 Sum_probs=48.9
Q ss_pred hhhcccCceeeEEEEEEcCC-------CeEEEEEEeeccCcCcchhHHHHHHHHHhcC-CCceeeEeeeecCccccCCce
Q 037916 405 LCWIDMGSFGSVYKGILDEG-------KTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDF 476 (741)
Q Consensus 405 ~~~ig~G~~g~V~~a~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~ 476 (741)
++.+..|-...+|+...... +..|++|+..... ...-+..+|..+++.+. +.-..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~---- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF-----P---- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----
Confidence 34577788889999987521 5778999875322 22334568888888774 33345666542 1
Q ss_pred EEEEEecccCCCh
Q 037916 477 KALVYEFMHNGSL 489 (741)
Q Consensus 477 ~~lv~e~~~~gsL 489 (741)
-+.||||++|.++
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999988654
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.63 E-value=0.014 Score=55.10 Aligned_cols=102 Identities=16% Similarity=0.065 Sum_probs=65.1
Q ss_pred ChhhhccCCCCCCcccCcccccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecccccccCC
Q 037916 488 SLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567 (741)
Q Consensus 488 sL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~ 567 (741)
+|.+.++.. ..++++.+++.++.|.+.+|.-+-..- .-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~---------~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---- 97 (229)
T 2yle_A 34 SLEEILRLY---------NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---- 97 (229)
T ss_dssp EHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------
T ss_pred cHHHHHHHc---------CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----
Confidence 788888633 578999999999999999987762110 111222347899999999888764 1111
Q ss_pred CCcccccccccccccccCcccccCCCCCCCccCchhHHHHHHHHHcCCCC
Q 037916 568 AHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617 (741)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPEe~~~~~~~~~~~DIwSlG~il~elltg~~p 617 (741)
.....+.|||.. ....+.+.=|||+|+++|..+--..|
T Consensus 98 ----------~~~~~~~~pe~~--~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----------AGEPPPVAGKLG--YSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------------CCS--SSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----------ccccCCCChhhc--cccchHHHHHHHHHHHHHHHhhcCCC
Confidence 012346688543 24556788999999999999886555
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.08 E-value=0.41 Score=50.67 Aligned_cols=28 Identities=25% Similarity=0.403 Sum_probs=23.9
Q ss_pred ceecCCCCCCeEe------CCCCceEEeeccccc
Q 037916 536 TAHCDLKPSNVLL------DHEMTAHVADFGLAK 563 (741)
Q Consensus 536 ivHrDlkp~NIll------~~~~~~kL~DFg~a~ 563 (741)
++|+|+.+.||++ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 445689999998775
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.15 E-value=0.21 Score=53.95 Aligned_cols=60 Identities=7% Similarity=-0.044 Sum_probs=17.0
Q ss_pred HhhhcccCceeeEEEEEEcCCCeEEEE------EEeeccC--cCcchhHHHHHHHHHhcCCCceeeEeeee
Q 037916 404 FLCWIDMGSFGSVYKGILDEGKTIIAV------KVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTVC 466 (741)
Q Consensus 404 ~~~~ig~G~~g~V~~a~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~ 466 (741)
+.++|| ||.||+|.+.....+||+ |..+... ......+.+|..+++.++|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345676 999999999765568888 6654211 22234577888888889999999988764
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.57 E-value=3.6 Score=38.68 Aligned_cols=90 Identities=17% Similarity=0.299 Sum_probs=63.5
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCc
Q 037916 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586 (741)
Q Consensus 507 ~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aP 586 (741)
...+...+++++..|+....+++. =+|--+.|+||+++.++.+++.-.|+... ++|
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~-------------------l~P 131 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNV-------------------VDP 131 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTT-------------------BSC
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccC-------------------CCC
Confidence 446788899999999988766653 47888999999999999999997776432 223
Q ss_pred ccccCCCCCCCccCch-hHHHHHHHHHcCCCCCCccccCCcc
Q 037916 587 AEYGLGSEVSINGDVY-SYGILLLELMTRKRPSDIMFEGNMN 627 (741)
Q Consensus 587 Ee~~~~~~~~~~~DIw-SlG~il~elltg~~p~~~~~~~~~~ 627 (741)
.+ .+ ..|.| .+=|++..+++++..|+....+...
T Consensus 132 ~~------~~-ee~fL~qyKAliiall~~K~~Fe~l~~G~le 166 (215)
T 4ann_A 132 LP------VS-EAEFLTRYKALVICAFNEKQSFDALVEGNLE 166 (215)
T ss_dssp CC------CC-HHHHHHHHHHHHHHHHCTTCCHHHHHHSCGG
T ss_pred CC------CC-HHHHHHHHHHHHHHHHcCCCCHHHHHcChHh
Confidence 11 11 11222 4667888899999998765555433
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.12 E-value=5.7 Score=37.49 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=57.7
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHHhcCCCCceecCCCCCCeEeCCCCceEEeecccccccCCCCcccccccccccccccCc
Q 037916 508 CLNFLQRINIAIDVACALK-YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586 (741)
Q Consensus 508 ~~~~~~~~~i~~qi~~aL~-~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aP 586 (741)
..+...+++++..|+.... +++ .-+|--+.|+||+++.++.+++.-.|+-. -++|
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~-------------------~lpP 136 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKE-------------------SLPP 136 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETT-------------------TBSS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcc-------------------cCCC
Confidence 3677888888888887666 555 45788899999999999999999877532 2334
Q ss_pred ccccCCCCCCCccCch-hHHHHHHHHHcCCCCCC
Q 037916 587 AEYGLGSEVSINGDVY-SYGILLLELMTRKRPSD 619 (741)
Q Consensus 587 Ee~~~~~~~~~~~DIw-SlG~il~elltg~~p~~ 619 (741)
.++ ...|.| ++=|++..++.++..|+
T Consensus 137 ~e~-------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 137 DEW-------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CSC-------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CCC-------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 221 112333 46678888888888775
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=72.26 E-value=6.9 Score=31.81 Aligned_cols=47 Identities=6% Similarity=-0.012 Sum_probs=26.6
Q ss_pred cccccCCccccCCCCccEEEcccccccccCCccccCCCcCcEEEcccC
Q 037916 115 KIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTN 162 (741)
Q Consensus 115 ~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 162 (741)
.++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344555555666666666666544 34455566666666666665543
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.20 E-value=11 Score=30.52 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=26.8
Q ss_pred ccccccCCccccCCCcCcEEEcccCCCCCcCcccccCCcccceeeccC
Q 037916 138 NQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIE 185 (741)
Q Consensus 138 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 185 (741)
..++.+...+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3445555566666666666666544 3335555666666666665544
No 453
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.62 E-value=2.9e+02 Score=27.67 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=43.1
Q ss_pred eEEEEEecccCCChhhhccCCCCCCcccCcccccCHHHHHHHHHHH--HHHHHHHHhcCC-CCcee-cCCCCCCeEeCCC
Q 037916 476 FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV--ACALKYLHHDCQ-PTTAH-CDLKPSNVLLDHE 551 (741)
Q Consensus 476 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi--~~aL~~LH~~~~-~~ivH-rDlkp~NIll~~~ 551 (741)
...++|||.+|..|.+.-... ....+... ...++ +-++.++..+.. -+.+. .--.++|||++++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--------~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--------APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--------HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred cceehhhhcCCCccccchhhh--------hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 466999999877766543211 00112222 22332 334555555532 22222 2256899999775
Q ss_pred C-ceEEeecccccc
Q 037916 552 M-TAHVADFGLAKL 564 (741)
Q Consensus 552 ~-~~kL~DFg~a~~ 564 (741)
+ .+.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 5 588999988754
Done!