Query 037923
Match_columns 97
No_of_seqs 140 out of 1011
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 09:20:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rkn_A DIR1 protein, AT5G48485 99.5 1.5E-15 5E-20 92.4 1.2 63 32-95 2-77 (77)
2 1n89_A Lipid transfer protein; 99.4 3.7E-14 1.3E-18 84.3 1.0 52 40-95 5-67 (67)
3 1l6h_A LTP2, non-specific lipi 99.4 2.1E-14 7.1E-19 85.8 -0.3 53 40-96 6-69 (69)
4 2alg_A Non-specific lipid tran 99.3 6.7E-14 2.3E-18 87.7 -1.1 57 33-92 2-78 (92)
5 1afh_A Maize nonspecific lipid 99.3 5.8E-14 2E-18 88.2 -1.4 58 33-92 2-79 (93)
6 2ljo_A Non-specific lipid-tran 99.3 7.4E-14 2.5E-18 87.9 -1.7 59 32-93 1-79 (93)
7 1bwo_A NS-LTP1, nonspecific li 99.3 1.7E-13 5.8E-18 85.6 -1.3 56 34-92 2-77 (90)
8 1t12_A LTP 1, nonspecific lipi 99.2 5.7E-13 2E-17 83.3 -1.6 56 33-92 2-77 (91)
9 1siy_A LTP 1, NS-LTP1, nonspec 99.2 5.8E-13 2E-17 83.3 -1.8 56 34-92 2-77 (91)
10 1s6d_A Albumin 8; all helix, f 98.2 1.2E-06 4.2E-11 55.6 3.8 67 30-96 6-102 (103)
11 3ob4_A Conglutin, maltose ABC 97.9 9.5E-07 3.3E-11 67.8 -0.9 65 32-96 370-489 (500)
12 2lvf_A 2S albumin; allergen, c 97.8 2.6E-06 9E-11 55.0 0.1 65 32-96 5-106 (114)
13 1psy_A 2S albumin, RICC3; albu 97.7 1.4E-05 4.7E-10 52.4 2.4 61 30-90 13-116 (125)
14 1sm7_A Recombinant IB pronapin 97.6 8.4E-06 2.9E-10 52.0 -0.1 63 34-96 4-105 (109)
15 1w2q_A Conglutin, ARA H 6; all 97.4 3.6E-05 1.2E-09 50.5 1.4 67 30-96 11-118 (127)
16 1pnb_B Napin BNIB; napin IA an 97.4 9.3E-05 3.2E-09 44.3 2.7 41 56-96 8-71 (75)
17 1b1u_A Protein (alpha-amylase/ 97.3 4.2E-05 1.4E-09 50.0 0.5 54 40-93 15-108 (122)
18 1bea_A Bifunctional amylase/se 97.2 0.00012 4.1E-09 48.0 2.0 54 40-93 15-109 (127)
19 2ds2_B Sweet protein mabinlin- 97.2 0.00017 5.8E-09 42.9 2.0 40 57-96 5-68 (72)
20 1hss_A 0.19 alpha-amylase inhi 97.1 4.5E-05 1.5E-09 49.9 -0.9 54 40-93 15-104 (124)
21 1hyp_A Hydrophobic protein fro 66.8 3.1 0.00011 24.9 1.9 54 33-93 6-72 (80)
22 1skh_A Major prion protein 2; 20.2 23 0.0008 17.1 0.1 13 12-24 6-18 (30)
No 1
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.52 E-value=1.5e-15 Score=92.40 Aligned_cols=63 Identities=38% Similarity=0.779 Sum_probs=53.9
Q ss_pred cCCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCCCCccchhh------------HHHhhccccCCCCCC-CC
Q 037923 32 SQSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVDRDCFCNTV------------RIAARLPSQCNLPPL-SC 95 (97)
Q Consensus 32 ~~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~~~ClC~~~------------~~a~~LP~~Cgv~~~-~C 95 (97)
..+|++++.+|.+|++|++++ +...|+.+||++||+.|..|+|.++ ++|++||++||++.| +|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~-~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKE-NPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSS-SCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCC-CCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 468999999999999999974 2368999999999988889999753 579999999999954 77
No 2
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.40 E-value=3.7e-14 Score=84.28 Aligned_cols=52 Identities=31% Similarity=0.777 Sum_probs=45.8
Q ss_pred cCccCchhhhcCCCCCCCCChhHHHHHhcCCCCccchhh-----------HHHhhccccCCCCCCCC
Q 037923 40 TNLNSCAPYVVPGVATTTPSSDCCAALQSVDRDCFCNTV-----------RIAARLPSQCNLPPLSC 95 (97)
Q Consensus 40 ~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~~~ClC~~~-----------~~a~~LP~~Cgv~~~~C 95 (97)
.+|.+|++|++++ .+|+.+||++||+. ..|+|.++ ++|++||++||++.|+|
T Consensus 5 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 67 (67)
T 1n89_A 5 SQLAVCASAILSG---AKPSGECCGNLRAQ-QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67 (67)
T ss_dssp STTHHHHHHHTTC---CCCCHHHHHHHHHH-SSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCSCC
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 4789999999976 57999999999985 89999653 57999999999998887
No 3
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.40 E-value=2.1e-14 Score=85.81 Aligned_cols=53 Identities=26% Similarity=0.715 Sum_probs=46.5
Q ss_pred cCccCchhhhcCCCCCCCCChhHHHHHhcCCCCccchhh-----------HHHhhccccCCCCCCCCC
Q 037923 40 TNLNSCAPYVVPGVATTTPSSDCCAALQSVDRDCFCNTV-----------RIAARLPSQCNLPPLSCT 96 (97)
Q Consensus 40 ~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~~~ClC~~~-----------~~a~~LP~~Cgv~~~~C~ 96 (97)
.+|.+|++|++++ .+||.+||++||+. ..|+|.++ ++|++||++||++.|+|+
T Consensus 6 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C~ 69 (69)
T 1l6h_A 6 GQLTVCTGAIAGG---ARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH 69 (69)
T ss_dssp TTHHHHHHHHTTC---CSTTHHHHHHHHHH-HHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCCC
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCCCCC
Confidence 4789999999976 57999999999985 78999653 479999999999999995
No 4
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.33 E-value=6.7e-14 Score=87.70 Aligned_cols=57 Identities=30% Similarity=0.693 Sum_probs=49.2
Q ss_pred CCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----------CCccchh----------hHHHhhccccCCCCC
Q 037923 33 QSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----------RDCFCNT----------VRIAARLPSQCNLPP 92 (97)
Q Consensus 33 ~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----------~~ClC~~----------~~~a~~LP~~Cgv~~ 92 (97)
.+|+++...|.||++|++++ ..|+++||+++++++ ..|+|.+ .++|++||++||++.
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~---~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~ 78 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGG---GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSI 78 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHC---SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCC
T ss_pred CChHHHHHhccCcHHHHcCC---CCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCC
Confidence 57999999999999999987 458889999999964 4799974 368999999999983
No 5
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.33 E-value=5.8e-14 Score=88.16 Aligned_cols=58 Identities=28% Similarity=0.639 Sum_probs=50.0
Q ss_pred CCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----------CCccchh----------hHHHhhccccCCCCC
Q 037923 33 QSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----------RDCFCNT----------VRIAARLPSQCNLPP 92 (97)
Q Consensus 33 ~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----------~~ClC~~----------~~~a~~LP~~Cgv~~ 92 (97)
.+|+++...|.||++|+++++ ..|+.+||+++++++ ..|+|.. .++|++||++||++.
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~ 79 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSI 79 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC--CSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCC
T ss_pred CChHHHHHhccCcHHHHcCCC--CCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCC
Confidence 579999999999999999864 578899999999984 3699963 379999999999973
No 6
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.31 E-value=7.4e-14 Score=87.86 Aligned_cols=59 Identities=31% Similarity=0.682 Sum_probs=48.9
Q ss_pred cCCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC--------CCccchh------------hHHHhhccccCCCC
Q 037923 32 SQSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD--------RDCFCNT------------VRIAARLPSQCNLP 91 (97)
Q Consensus 32 ~~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~--------~~ClC~~------------~~~a~~LP~~Cgv~ 91 (97)
+.+|++++..|.||++|++++ ..|++.||+++++++ .+|+|.- .++|.+||++||+.
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~---~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~ 77 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG---PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVN 77 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS---SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhHHHHHcCC---CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCC
Confidence 368999999999999999986 569999999999983 2466642 37999999999997
Q ss_pred CC
Q 037923 92 PL 93 (97)
Q Consensus 92 ~~ 93 (97)
.|
T Consensus 78 ~p 79 (93)
T 2ljo_A 78 IP 79 (93)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 7
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.28 E-value=1.7e-13 Score=85.57 Aligned_cols=56 Identities=25% Similarity=0.625 Sum_probs=48.1
Q ss_pred CchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----------CCccchh----------hHHHhhccccCCCCC
Q 037923 34 SCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----------RDCFCNT----------VRIAARLPSQCNLPP 92 (97)
Q Consensus 34 ~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----------~~ClC~~----------~~~a~~LP~~Cgv~~ 92 (97)
+|+++..+|.||++|+++++ .|+.+||+++++++ ..|+|.. .++|++||++||++.
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~---~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~ 77 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNL 77 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCC
T ss_pred CHHHHHHhhcccHHHHcCCC---CCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCC
Confidence 68999999999999999873 39999999999974 3799952 378999999999983
No 8
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.21 E-value=5.7e-13 Score=83.35 Aligned_cols=56 Identities=27% Similarity=0.573 Sum_probs=47.7
Q ss_pred CCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----------CCccchh----------hHHHhhccccCCCCC
Q 037923 33 QSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----------RDCFCNT----------VRIAARLPSQCNLPP 92 (97)
Q Consensus 33 ~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----------~~ClC~~----------~~~a~~LP~~Cgv~~ 92 (97)
.+|+++...|.||++|+++++ . |+ +||+++++++ ..|+|.. .++|++||++||++.
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~ 77 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG--P-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNI 77 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS--C-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCC
T ss_pred CChHHHHHhccCcHHHHcCCC--C-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCC
Confidence 579999999999999999864 4 88 9999999973 3799952 379999999999973
No 9
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.20 E-value=5.8e-13 Score=83.26 Aligned_cols=56 Identities=23% Similarity=0.562 Sum_probs=47.7
Q ss_pred CchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----------CCccchh----------hHHHhhccccCCCCC
Q 037923 34 SCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----------RDCFCNT----------VRIAARLPSQCNLPP 92 (97)
Q Consensus 34 ~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----------~~ClC~~----------~~~a~~LP~~Cgv~~ 92 (97)
+|+++...|.||++|+++++ .|+.+||+++++++ ..|+|.. .++|++||++||++.
T Consensus 2 ~C~~v~~~L~pCl~yv~~~~---~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~ 77 (91)
T 1siy_A 2 TCGQVQGNLAQCIGFLQKGG---VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNI 77 (91)
T ss_dssp CTTTTHHHHHHHHHHHTSCS---CCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCC
T ss_pred CHHHHHHhccCcHHHHhCCC---CCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCC
Confidence 69999999999999999873 49999999999972 2699952 378999999999973
No 10
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=98.19 E-value=1.2e-06 Score=55.62 Aligned_cols=67 Identities=27% Similarity=0.734 Sum_probs=52.7
Q ss_pred cccCCchhhc--cC-ccCchhhhcCCC----C------CCCCChhHHHHHhcCCCCccchhh-----------------H
Q 037923 30 THSQSCTSEL--TN-LNSCAPYVVPGV----A------TTTPSSDCCAALQSVDRDCFCNTV-----------------R 79 (97)
Q Consensus 30 ~~~~~C~~~~--~~-L~~C~~yv~~~~----~------~~~Ps~~CC~~l~~~~~~ClC~~~-----------------~ 79 (97)
.....|...+ .+ |.+|..||.... + ......+||+.|+.++..|.|..+ .
T Consensus 6 ~~~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q 85 (103)
T 1s6d_A 6 RTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMS 85 (103)
T ss_dssp CCSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHH
T ss_pred CCCcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHH
Confidence 3456798887 35 899999998531 1 023468999999999999999864 4
Q ss_pred HHhhccccCCCCCCCCC
Q 037923 80 IAARLPSQCNLPPLSCT 96 (97)
Q Consensus 80 ~a~~LP~~Cgv~~~~C~ 96 (97)
+|.+||..||+++.+|.
T Consensus 86 ~A~~LP~~C~i~p~~C~ 102 (103)
T 1s6d_A 86 MAHNLPIECNLMSQPCQ 102 (103)
T ss_dssp HHHHHHHHTTSSSSCSC
T ss_pred HHHhcHHhcCCCcccCC
Confidence 79999999999987784
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=97.91 E-value=9.5e-07 Score=67.82 Aligned_cols=65 Identities=29% Similarity=0.788 Sum_probs=47.6
Q ss_pred cCCchhhc--cCccCchhhhcCCC--C---------------------------CCCCChhHHHHHhcCC--CCccchhh
Q 037923 32 SQSCTSEL--TNLNSCAPYVVPGV--A---------------------------TTTPSSDCCAALQSVD--RDCFCNTV 78 (97)
Q Consensus 32 ~~~C~~~~--~~L~~C~~yv~~~~--~---------------------------~~~Ps~~CC~~l~~~~--~~ClC~~~ 78 (97)
...|...+ .+|.+|+.|+...- + ..+--.+||+.|+.+. ++|+|..+
T Consensus 370 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~~l~~~~~~~~c~c~~~ 449 (500)
T 3ob4_A 370 ARRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEAL 449 (500)
T ss_dssp SCCHHHHHHHCCCHHHHHHHHHHHHTTSCC--CCCSSTTSCC---------------CHHHHHHHHGGGTTCHHHHHHHH
T ss_pred HHHHHHHHHhccCChHHHHHHHHhhccccccccCCCCcCCCCCCCCccccCCCccchHHHHHHHHHHhCCcccccccHHH
Confidence 44576664 66889999997510 0 0011178999999996 79999753
Q ss_pred ---------------------HHHhhccccCCCC-CCCCC
Q 037923 79 ---------------------RIAARLPSQCNLP-PLSCT 96 (97)
Q Consensus 79 ---------------------~~a~~LP~~Cgv~-~~~C~ 96 (97)
.+|+.||..||+. |.+|.
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~ 489 (500)
T 3ob4_A 450 QQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCD 489 (500)
T ss_dssp HHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCC
Confidence 4699999999999 56785
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=97.82 E-value=2.6e-06 Score=54.99 Aligned_cols=65 Identities=32% Similarity=0.831 Sum_probs=48.3
Q ss_pred cCCchhhc---cCccCchhhhcC----CCCCCC-------CChhHHHHHhcCCCCccchhh-------------------
Q 037923 32 SQSCTSEL---TNLNSCAPYVVP----GVATTT-------PSSDCCAALQSVDRDCFCNTV------------------- 78 (97)
Q Consensus 32 ~~~C~~~~---~~L~~C~~yv~~----~~~~~~-------Ps~~CC~~l~~~~~~ClC~~~------------------- 78 (97)
...|...+ .+|.+|..||.. +..... --.+||+.|+.+++.|.|..+
T Consensus 5 ~q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~ 84 (114)
T 2lvf_A 5 QEECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQM 84 (114)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred hHhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHH
Confidence 34677664 458899999974 111111 125699999999999999853
Q ss_pred ----HHHhhccccCCCCCCCCC
Q 037923 79 ----RIAARLPSQCNLPPLSCT 96 (97)
Q Consensus 79 ----~~a~~LP~~Cgv~~~~C~ 96 (97)
.+|.+||+.||+.+..|.
T Consensus 85 ~~~~q~A~~LP~~C~i~p~~C~ 106 (114)
T 2lvf_A 85 RRMMRLAENIPSRCNLSPMRCP 106 (114)
T ss_dssp HHHHHHHHHHHHHHCCCCSCCT
T ss_pred HHHHHHHHhChHhcCCCcccCC
Confidence 489999999999987785
No 13
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=97.73 E-value=1.4e-05 Score=52.40 Aligned_cols=61 Identities=26% Similarity=0.686 Sum_probs=47.0
Q ss_pred cccCCchhhc--cCccCchhhhcCCCC-C-------C---------C--CChhHHHHHhcCCCCccchhh----------
Q 037923 30 THSQSCTSEL--TNLNSCAPYVVPGVA-T-------T---------T--PSSDCCAALQSVDRDCFCNTV---------- 78 (97)
Q Consensus 30 ~~~~~C~~~~--~~L~~C~~yv~~~~~-~-------~---------~--Ps~~CC~~l~~~~~~ClC~~~---------- 78 (97)
.....|...+ ..|.+|..||..... . . . .-.+||+.|+.+++.|.|..+
T Consensus 13 ~~~q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQ 92 (125)
T 1psy_A 13 SSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQ 92 (125)
T ss_dssp SSSSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHH
Confidence 3455799887 579999999986310 0 0 1 247899999999999999764
Q ss_pred ------------HHHhhccccCCC
Q 037923 79 ------------RIAARLPSQCNL 90 (97)
Q Consensus 79 ------------~~a~~LP~~Cgv 90 (97)
.+|.+||+.||+
T Consensus 93 gq~~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 93 GQLHGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp TTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred hhhhHHHHHHHHHHHHhhHHHcCC
Confidence 479999999999
No 14
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=97.59 E-value=8.4e-06 Score=52.01 Aligned_cols=63 Identities=30% Similarity=0.799 Sum_probs=45.4
Q ss_pred Cchhhcc---CccCchhhhcCC---CCC-CC-------C--ChhHHHHHhcCCCCccchhhH------------------
Q 037923 34 SCTSELT---NLNSCAPYVVPG---VAT-TT-------P--SSDCCAALQSVDRDCFCNTVR------------------ 79 (97)
Q Consensus 34 ~C~~~~~---~L~~C~~yv~~~---~~~-~~-------P--s~~CC~~l~~~~~~ClC~~~~------------------ 79 (97)
.|...+. .|.+|..|+... .+. .. + ..+||+.|+.++..|.|..+.
T Consensus 4 ~C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~ 83 (109)
T 1sm7_A 4 KCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQST 83 (109)
T ss_dssp HHHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHH
T ss_pred hhHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHH
Confidence 4555553 388999999742 110 11 2 468999999999999998652
Q ss_pred ----HHhhccccCCCCCC-CCC
Q 037923 80 ----IAARLPSQCNLPPL-SCT 96 (97)
Q Consensus 80 ----~a~~LP~~Cgv~~~-~C~ 96 (97)
+|..||+.||+.++ .|.
T Consensus 84 ~~~~~a~~LP~~Cnl~~~~~C~ 105 (109)
T 1sm7_A 84 RIYQIAKNLPNVCNMKQIGTCP 105 (109)
T ss_dssp HHHHTTSSHHHHSCCCSSCSSC
T ss_pred HHHHHHHhCHHhcCCCCCCCCC
Confidence 47889999999854 574
No 15
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=97.44 E-value=3.6e-05 Score=50.51 Aligned_cols=67 Identities=28% Similarity=0.743 Sum_probs=49.6
Q ss_pred cccCCchhhc--cCccCchhhhcCCCCCC---------------CCChhHHHHHhcC--CCCccchhh------------
Q 037923 30 THSQSCTSEL--TNLNSCAPYVVPGVATT---------------TPSSDCCAALQSV--DRDCFCNTV------------ 78 (97)
Q Consensus 30 ~~~~~C~~~~--~~L~~C~~yv~~~~~~~---------------~Ps~~CC~~l~~~--~~~ClC~~~------------ 78 (97)
.....|...+ ..|.+|..||....... ..-..||+.|+.+ ++.|.|..+
T Consensus 11 ~~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~ 90 (127)
T 1w2q_A 11 GDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQ 90 (127)
T ss_dssp STTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTT
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhh
Confidence 3456798876 46899999998521000 1137899999999 899999753
Q ss_pred ---------HHHhhccccCCC-CCCCCC
Q 037923 79 ---------RIAARLPSQCNL-PPLSCT 96 (97)
Q Consensus 79 ---------~~a~~LP~~Cgv-~~~~C~ 96 (97)
.+|..||..||+ .+..|.
T Consensus 91 gqq~~~~~~q~A~~LP~~C~i~~~~~C~ 118 (127)
T 1w2q_A 91 DRQMVQQFKRELMSLPQQCNFRAPQRCD 118 (127)
T ss_dssp TSTTHHHHHHHHHHHHHHHTCCCSSCCS
T ss_pred hHHHHHHHHHHHHHhHHhcCCCCCCcCC
Confidence 368999999999 555674
No 16
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=97.40 E-value=9.3e-05 Score=44.31 Aligned_cols=41 Identities=34% Similarity=0.737 Sum_probs=34.2
Q ss_pred CCCChhHHHHHhcCCCCccchhh----------------------HHHhhccccCCCC-CCCCC
Q 037923 56 TTPSSDCCAALQSVDRDCFCNTV----------------------RIAARLPSQCNLP-PLSCT 96 (97)
Q Consensus 56 ~~Ps~~CC~~l~~~~~~ClC~~~----------------------~~a~~LP~~Cgv~-~~~C~ 96 (97)
.....+||+.|+.+++.|.|..+ .+|..||..||+. +..|.
T Consensus 8 ~~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C~ 71 (75)
T 1pnb_B 8 PWLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCP 71 (75)
T ss_dssp CSCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCCC
T ss_pred hHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCCC
Confidence 35678999999999999999753 4789999999998 45674
No 17
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=97.32 E-value=4.2e-05 Score=49.96 Aligned_cols=54 Identities=31% Similarity=0.692 Sum_probs=40.7
Q ss_pred cCccCchhhhcCC---CCCCCC----ChhHHHHHhcCCCCccchhh-------------------------------HHH
Q 037923 40 TNLNSCAPYVVPG---VATTTP----SSDCCAALQSVDRDCFCNTV-------------------------------RIA 81 (97)
Q Consensus 40 ~~L~~C~~yv~~~---~~~~~P----s~~CC~~l~~~~~~ClC~~~-------------------------------~~a 81 (97)
+.|.+|.+||... .....| ..+||++|++++..|+|..+ ..|
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A 94 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFA 94 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHG
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHH
Confidence 4578999999642 111223 46799999999999999742 268
Q ss_pred hhc--cccCCCCCC
Q 037923 82 ARL--PSQCNLPPL 93 (97)
Q Consensus 82 ~~L--P~~Cgv~~~ 93 (97)
.+| |+.||++++
T Consensus 95 ~~Lv~P~~Cnl~~~ 108 (122)
T 1b1u_A 95 PKLVTEVECNLATI 108 (122)
T ss_dssp GGTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 899 999999865
No 18
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=97.23 E-value=0.00012 Score=48.05 Aligned_cols=54 Identities=30% Similarity=0.634 Sum_probs=40.3
Q ss_pred cCccCchhhhcCC---CCCCC----CChhHHHHHhcCCCCccchhh--------------------------------HH
Q 037923 40 TNLNSCAPYVVPG---VATTT----PSSDCCAALQSVDRDCFCNTV--------------------------------RI 80 (97)
Q Consensus 40 ~~L~~C~~yv~~~---~~~~~----Ps~~CC~~l~~~~~~ClC~~~--------------------------------~~ 80 (97)
+.|.+|.+||... ..... +...||++|++++..|+|..+ ..
T Consensus 15 ~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~ 94 (127)
T 1bea_A 15 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGF 94 (127)
T ss_dssp SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHH
T ss_pred ccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHH
Confidence 4578999999632 11122 345699999999999999742 25
Q ss_pred Hhhc--cccCCCCCC
Q 037923 81 AARL--PSQCNLPPL 93 (97)
Q Consensus 81 a~~L--P~~Cgv~~~ 93 (97)
|.+| |..||++++
T Consensus 95 A~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 95 AATLVTEAECNLATI 109 (127)
T ss_dssp HTTTTSTTTTCCCCT
T ss_pred HHhcCCcccCCCCCC
Confidence 8889 999999876
No 19
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=97.17 E-value=0.00017 Score=42.91 Aligned_cols=40 Identities=38% Similarity=0.899 Sum_probs=33.2
Q ss_pred CCChhHHHHHhcCCCCccchhh-----------------------HHHhhccccCCCCC-CCCC
Q 037923 57 TPSSDCCAALQSVDRDCFCNTV-----------------------RIAARLPSQCNLPP-LSCT 96 (97)
Q Consensus 57 ~Ps~~CC~~l~~~~~~ClC~~~-----------------------~~a~~LP~~Cgv~~-~~C~ 96 (97)
.....||+.|+.+++.|.|..+ .+|..||..||+.+ ..|.
T Consensus 5 ~~~qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C~ 68 (72)
T 2ds2_B 5 PALRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACP 68 (72)
T ss_dssp CHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCCC
T ss_pred hHHHHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcCC
Confidence 3457899999999999999753 47999999999984 5674
No 20
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=97.12 E-value=4.5e-05 Score=49.92 Aligned_cols=54 Identities=26% Similarity=0.592 Sum_probs=39.9
Q ss_pred cCccCchhhhcCCCC-CC---CCChhHHHHHhcCCCCccchhh--------------------------------HHHhh
Q 037923 40 TNLNSCAPYVVPGVA-TT---TPSSDCCAALQSVDRDCFCNTV--------------------------------RIAAR 83 (97)
Q Consensus 40 ~~L~~C~~yv~~~~~-~~---~Ps~~CC~~l~~~~~~ClC~~~--------------------------------~~a~~ 83 (97)
+.|.+|..||...-. .. ....+||++|++++..|+|..+ ..|.+
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~ 94 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAAS 94 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTT
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHh
Confidence 457899999964210 12 2357899999999999999753 15788
Q ss_pred ccccCCCCCC
Q 037923 84 LPSQCNLPPL 93 (97)
Q Consensus 84 LP~~Cgv~~~ 93 (97)
||..||++++
T Consensus 95 LP~~Cnl~~~ 104 (124)
T 1hss_A 95 ITAVCRLPIV 104 (124)
T ss_dssp HHHHTTCCEE
T ss_pred chhhcCCCCC
Confidence 9999999754
No 21
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=66.77 E-value=3.1 Score=24.86 Aligned_cols=54 Identities=22% Similarity=0.503 Sum_probs=36.0
Q ss_pred CCchhhccCccCchhhhcCCCCCCCCChhHHHHHhcCC----CCccchhhHH--------H-hhccccCCCCCC
Q 037923 33 QSCTSELTNLNSCAPYVVPGVATTTPSSDCCAALQSVD----RDCFCNTVRI--------A-ARLPSQCNLPPL 93 (97)
Q Consensus 33 ~~C~~~~~~L~~C~~yv~~~~~~~~Ps~~CC~~l~~~~----~~ClC~~~~~--------a-~~LP~~Cgv~~~ 93 (97)
..|. +|..|.+-+.+. ..|..+||.-++.+. ..|+|..++. + .-|-..||-..|
T Consensus 6 ~~CP----kLgvCanvL~g~---~~~~~~CC~Ll~GL~dleAAvCLCtaik~Lgilnlpv~L~llln~Cgk~~P 72 (80)
T 1hyp_A 6 PSCP----DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYP 72 (80)
T ss_dssp CCSC----CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHTTCSSC
T ss_pred CCCC----chhHHHHHhCcC---CCCCCccchhhhCcchhhhhhhhhhhccccceeecChhHHHHHHHhCCcCc
Confidence 3466 678898887532 337789999999984 3699976541 1 223356887643
No 22
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=20.16 E-value=23 Score=17.13 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHh
Q 037923 12 TKAALLLLLIAVA 24 (97)
Q Consensus 12 ~~~~ll~~ll~~~ 24 (97)
+-+.|++++++.+
T Consensus 6 ~~cwilvLfva~w 18 (30)
T 1skh_A 6 IGSWILVLFVAMW 18 (30)
T ss_dssp TTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 3456677776554
Done!