Query 037927
Match_columns 329
No_of_seqs 127 out of 1451
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 09:25:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 5.2E-11 1.8E-15 76.7 4.3 41 1-41 9-49 (53)
2 2e31_A FBS1, F-box only protei 99.0 1.6E-10 5.3E-15 100.8 4.5 48 1-48 51-99 (297)
3 2xn4_A Kelch-like protein 2; s 98.9 5.8E-08 2E-12 85.5 18.7 155 118-309 77-239 (302)
4 3ii7_A Kelch-like protein 7; p 98.9 7.4E-08 2.5E-12 85.0 19.1 151 118-305 118-278 (306)
5 1zgk_A Kelch-like ECH-associat 98.9 5.8E-08 2E-12 85.9 17.9 154 118-308 90-249 (308)
6 1zgk_A Kelch-like ECH-associat 98.9 1.1E-07 3.7E-12 84.2 19.4 155 117-308 136-296 (308)
7 2woz_A Kelch repeat and BTB do 98.9 1.9E-07 6.4E-12 83.0 21.0 155 120-309 80-241 (318)
8 4asc_A Kelch repeat and BTB do 98.9 5.6E-08 1.9E-12 86.3 17.4 157 119-309 68-231 (315)
9 2vpj_A Kelch-like protein 12; 98.9 8.9E-08 3E-12 84.2 17.5 155 118-309 78-241 (301)
10 3ii7_A Kelch-like protein 7; p 98.9 5.2E-08 1.8E-12 86.0 16.0 168 106-309 54-235 (306)
11 2vpj_A Kelch-like protein 12; 98.9 1.7E-07 5.9E-12 82.4 19.0 167 106-309 111-288 (301)
12 4asc_A Kelch repeat and BTB do 98.8 2.4E-07 8.1E-12 82.2 17.5 152 118-305 117-283 (315)
13 2woz_A Kelch repeat and BTB do 98.8 2.6E-07 9E-12 82.0 16.4 152 118-305 127-293 (318)
14 2xn4_A Kelch-like protein 2; s 98.7 4.3E-07 1.5E-11 79.9 16.4 156 117-309 29-192 (302)
15 2uvk_A YJHT; unknown function, 98.7 8.2E-07 2.8E-11 80.0 16.5 173 107-308 19-237 (357)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.6 7.7E-06 2.6E-10 75.6 21.8 47 1-47 19-65 (445)
17 2uvk_A YJHT; unknown function, 98.6 4E-06 1.4E-10 75.5 18.0 111 186-309 168-304 (357)
18 3v7d_B Cell division control p 98.5 3E-05 1E-09 71.9 21.8 39 2-40 16-55 (464)
19 1p22_A F-BOX/WD-repeat protein 98.4 4.4E-06 1.5E-10 77.2 14.8 44 2-45 12-59 (435)
20 2zwa_A Leucine carboxyl methyl 98.2 2.2E-05 7.5E-10 77.4 14.6 155 117-305 411-589 (695)
21 3l2o_B F-box only protein 4; s 98.0 2.3E-06 7.8E-11 73.9 2.4 47 2-48 6-52 (312)
22 2zwa_A Leucine carboxyl methyl 97.7 0.00033 1.1E-08 68.9 12.4 153 118-305 468-641 (695)
23 1k3i_A Galactose oxidase precu 97.6 0.00059 2E-08 66.6 12.3 107 119-258 220-329 (656)
24 2ast_B S-phase kinase-associat 97.5 3.4E-05 1.2E-09 68.6 2.9 39 1-39 9-47 (336)
25 1k3i_A Galactose oxidase precu 97.5 0.00042 1.4E-08 67.7 10.8 152 120-305 168-329 (656)
26 2p1m_B Transport inhibitor res 97.2 0.00016 5.4E-09 69.4 2.9 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.7 0.00063 2.2E-08 65.2 2.5 33 2-34 14-47 (592)
28 4gga_A P55CDC, cell division c 84.7 21 0.00071 31.7 14.6 150 101-295 109-261 (420)
29 1q7f_A NHL, brain tumor CG1071 75.7 32 0.0011 28.3 17.0 148 105-295 129-280 (286)
30 4e54_B DNA damage-binding prot 71.7 42 0.0014 29.8 11.7 148 107-295 131-282 (435)
31 1q7f_A NHL, brain tumor CG1071 71.1 42 0.0014 27.5 15.0 151 105-293 38-192 (286)
32 3fvz_A Peptidyl-glycine alpha- 70.1 50 0.0017 28.0 15.2 165 104-296 151-323 (329)
33 2fp8_A Strictosidine synthase; 69.5 51 0.0017 27.9 13.3 53 243-295 260-313 (322)
34 4ggc_A P55CDC, cell division c 68.0 50 0.0017 27.2 13.9 67 105-197 34-100 (318)
35 3m0c_C LDL receptor, low-densi 67.1 1E+02 0.0035 30.4 17.5 61 226-294 568-629 (791)
36 3q7m_A Lipoprotein YFGL, BAMB; 66.7 63 0.0021 27.9 13.7 107 106-254 52-164 (376)
37 3jro_A Fusion protein of prote 66.0 1E+02 0.0034 29.9 16.6 142 115-295 28-189 (753)
38 3jrp_A Fusion protein of prote 65.7 61 0.0021 27.4 17.2 94 185-295 78-191 (379)
39 4aez_A CDC20, WD repeat-contai 61.3 82 0.0028 27.4 15.8 144 106-295 102-248 (401)
40 2z2n_A Virginiamycin B lyase; 59.8 69 0.0024 26.0 15.5 143 105-293 107-253 (299)
41 3dsm_A Uncharacterized protein 56.4 92 0.0031 26.4 13.6 92 185-293 63-159 (328)
42 4h5i_A Guanine nucleotide-exch 56.3 98 0.0033 26.7 17.0 77 227-314 280-360 (365)
43 1l0q_A Surface layer protein; 56.2 96 0.0033 26.5 11.1 138 109-294 3-146 (391)
44 1ddw_A GLGF-domain protein hom 55.4 25 0.00085 25.7 5.5 40 118-165 11-51 (120)
45 3dwl_C Actin-related protein 2 54.2 1E+02 0.0035 26.2 11.2 146 107-294 22-176 (377)
46 3ei3_B DNA damage-binding prot 53.2 1.1E+02 0.0037 26.2 15.5 151 105-295 82-236 (383)
47 1n7d_A LDL receptor, low-densi 52.9 1.3E+02 0.0043 29.1 11.7 59 223-288 544-607 (699)
48 3dsm_A Uncharacterized protein 51.9 1.1E+02 0.0037 25.9 12.5 151 106-294 139-301 (328)
49 3v64_C Agrin; beta propeller, 51.2 1.2E+02 0.0041 26.2 16.7 144 104-291 81-230 (349)
50 3q7m_A Lipoprotein YFGL, BAMB; 50.1 74 0.0025 27.4 9.0 56 223-284 49-111 (376)
51 1evh_A WH1 domain, protein (ME 49.8 33 0.0011 24.6 5.3 42 118-165 11-52 (112)
52 3u4y_A Uncharacterized protein 49.8 1.1E+02 0.0038 25.3 13.7 146 107-295 9-160 (331)
53 1rwi_B Serine/threonine-protei 49.8 98 0.0034 24.8 16.2 145 106-296 117-265 (270)
54 3hfq_A Uncharacterized protein 48.1 65 0.0022 27.2 8.2 65 226-295 49-117 (347)
55 3p5b_L Low density lipoprotein 46.4 1.5E+02 0.0053 26.1 17.2 59 227-294 257-317 (400)
56 3v65_B Low-density lipoprotein 46.2 1.5E+02 0.0052 25.9 16.3 140 107-294 87-231 (386)
57 1rwi_B Serine/threonine-protei 46.1 1.1E+02 0.0038 24.4 17.9 142 106-294 76-221 (270)
58 4g56_B MGC81050 protein; prote 45.3 1.4E+02 0.0049 25.4 15.1 52 242-297 291-345 (357)
59 1i2h_A PSD-ZIP45(homer-1C/VESL 44.3 39 0.0013 26.3 5.2 40 118-165 16-56 (168)
60 3bws_A Protein LP49; two-domai 41.9 1.7E+02 0.0058 25.3 11.8 145 105-294 178-333 (433)
61 3o4h_A Acylamino-acid-releasin 41.3 1E+02 0.0035 28.4 8.9 146 108-293 123-274 (582)
62 1npe_A Nidogen, entactin; glyc 41.2 1.4E+02 0.0048 24.1 14.6 146 103-291 43-194 (267)
63 2hes_X YDR267CP; beta-propelle 40.4 1.6E+02 0.0056 24.6 14.1 54 242-295 270-328 (330)
64 3amr_A 3-phytase; beta-propell 40.0 1.9E+02 0.0066 25.3 15.9 141 117-294 98-262 (355)
65 4ggc_A P55CDC, cell division c 39.6 1.5E+02 0.0052 24.0 16.8 52 242-296 263-316 (318)
66 2z2n_A Virginiamycin B lyase; 39.0 1.5E+02 0.0052 23.8 16.4 141 105-291 149-291 (299)
67 2be1_A Serine/threonine-protei 37.7 82 0.0028 27.5 7.0 24 226-255 110-133 (339)
68 2pm9_A Protein WEB1, protein t 37.3 1.9E+02 0.0066 24.6 13.6 153 108-296 178-338 (416)
69 2dg1_A DRP35, lactonase; beta 35.3 1.9E+02 0.0065 23.9 13.4 152 105-294 53-212 (333)
70 1k8k_C P40, ARP2/3 complex 41 34.8 2E+02 0.0068 24.0 14.4 144 106-294 18-172 (372)
71 1l0q_A Surface layer protein; 34.7 2.1E+02 0.0072 24.2 13.4 145 103-294 38-188 (391)
72 3dr2_A Exported gluconolactona 34.4 2E+02 0.0067 23.8 11.3 31 226-263 248-278 (305)
73 3nol_A Glutamine cyclotransfer 32.6 2.2E+02 0.0074 23.8 8.8 93 185-292 15-113 (262)
74 3hrp_A Uncharacterized protein 32.5 2.6E+02 0.0088 24.6 16.0 151 101-292 135-295 (409)
75 2kwv_A RAD30 homolog B, DNA po 31.1 22 0.00077 20.9 1.4 16 2-17 22-37 (48)
76 3mbr_X Glutamine cyclotransfer 31.0 2.2E+02 0.0076 23.4 9.1 64 223-292 25-91 (243)
77 3bws_A Protein LP49; two-domai 30.9 2.6E+02 0.0088 24.1 10.6 49 243-295 381-432 (433)
78 3v65_B Low-density lipoprotein 30.4 2.7E+02 0.0093 24.2 17.4 58 227-294 257-315 (386)
79 1gxr_A ESG1, transducin-like e 30.2 2.2E+02 0.0076 23.1 15.2 60 227-295 235-296 (337)
80 2ojh_A Uncharacterized protein 29.2 2.1E+02 0.0072 22.6 13.9 137 116-295 20-160 (297)
81 4g56_B MGC81050 protein; prote 29.2 2.6E+02 0.009 23.7 13.0 28 105-132 148-175 (357)
82 3jrp_A Fusion protein of prote 28.7 2.5E+02 0.0087 23.3 16.6 61 242-305 230-294 (379)
83 2dk7_A Transcription elongatio 28.1 71 0.0024 21.0 3.6 28 109-137 22-49 (73)
84 3v64_C Agrin; beta propeller, 27.7 2.9E+02 0.0098 23.6 18.1 144 104-294 124-272 (349)
85 2xyi_A Probable histone-bindin 27.3 3.1E+02 0.011 23.9 11.8 52 242-295 299-353 (430)
86 3hfq_A Uncharacterized protein 27.2 2.7E+02 0.0092 23.1 14.3 160 103-295 147-317 (347)
87 2qc5_A Streptogramin B lactona 25.2 2.6E+02 0.009 22.3 15.9 142 106-293 113-258 (300)
88 1kb0_A Quinohemoprotein alcoho 25.1 1.7E+02 0.0057 28.1 7.4 25 223-253 73-97 (677)
89 1ri6_A Putative isomerase YBHE 24.9 2.8E+02 0.0097 22.6 15.6 64 242-314 252-321 (343)
90 3v9f_A Two-component system se 23.3 5E+02 0.017 24.9 17.1 138 106-283 416-556 (781)
91 3g4e_A Regucalcin; six bladed 23.3 3.1E+02 0.01 22.4 14.0 69 105-203 22-90 (297)
92 3m0c_C LDL receptor, low-densi 22.7 5.5E+02 0.019 25.1 16.2 81 185-284 492-577 (791)
93 3bg1_A Protein SEC13 homolog; 22.6 3.2E+02 0.011 22.5 11.7 26 105-130 22-47 (316)
94 2iwa_A Glutamine cyclotransfer 22.4 3.3E+02 0.011 22.5 8.6 62 223-290 25-90 (266)
95 4gga_A P55CDC, cell division c 22.2 3.8E+02 0.013 23.1 16.7 53 242-297 343-397 (420)
96 3vgz_A Uncharacterized protein 21.7 3.4E+02 0.012 22.3 14.1 152 102-294 191-352 (353)
97 2qc5_A Streptogramin B lactona 21.7 3.1E+02 0.011 21.8 16.0 138 101-284 24-164 (300)
98 4aez_A CDC20, WD repeat-contai 21.5 3.8E+02 0.013 22.9 16.5 52 242-295 326-380 (401)
99 1p22_A F-BOX/WD-repeat protein 21.4 4E+02 0.014 23.1 17.5 31 100-131 176-206 (435)
100 2qe8_A Uncharacterized protein 21.4 2.8E+02 0.0097 23.3 7.6 71 223-294 71-153 (343)
101 1ijq_A LDL receptor, low-densi 21.2 3.6E+02 0.012 22.5 18.3 146 102-290 83-233 (316)
102 3v7d_B Cell division control p 21.2 4.1E+02 0.014 23.1 19.0 132 115-294 329-462 (464)
103 1w6s_A Methanol dehydrogenase 21.1 3.8E+02 0.013 25.2 8.9 53 224-284 481-534 (599)
104 3s3x_D Psalmotoxin-1; acid-sen 21.1 33 0.0011 18.2 0.8 22 104-127 15-36 (37)
105 3e5z_A Putative gluconolactona 21.0 2.1E+02 0.0071 23.3 6.5 57 227-293 38-97 (296)
106 3fm0_A Protein CIAO1; WDR39,SG 20.9 3.7E+02 0.013 22.4 16.1 151 105-295 25-181 (345)
107 3fvz_A Peptidyl-glycine alpha- 20.5 3.7E+02 0.013 22.3 13.9 143 119-294 70-226 (329)
108 1flg_A Protein (quinoprotein e 20.5 4E+02 0.014 24.8 9.0 78 187-284 467-547 (582)
109 1kv9_A Type II quinohemoprotei 20.3 2.5E+02 0.0086 26.7 7.6 25 223-253 62-86 (668)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.11 E-value=5.2e-11 Score=76.74 Aligned_cols=41 Identities=34% Similarity=0.668 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHhcCCcchhhhhhhchHhhHhhcCChhHH
Q 037927 1 MSNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLISDPGFA 41 (329)
Q Consensus 1 ~~~LP~Dll~eIL~rLp~~~l~r~~~VcK~W~~li~~~~F~ 41 (329)
++.||+|++.+||++||++++.++++|||+|+.++.++.|-
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 46899999999999999999999999999999999988763
No 2
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.02 E-value=1.6e-10 Score=100.83 Aligned_cols=48 Identities=27% Similarity=0.652 Sum_probs=45.4
Q ss_pred CCCCcHHHHHHHHhcCCcchhh-hhhhchHhhHhhcCChhHHHHHhhhc
Q 037927 1 MSNLPDDVLIEVLSRLPVKSLL-RFKCACKQWLSLISDPGFALLQYKRT 48 (329)
Q Consensus 1 ~~~LP~Dll~eIL~rLp~~~l~-r~~~VcK~W~~li~~~~F~~~~~~~~ 48 (329)
|+.||+||+++||+|||+++|+ ||++|||+|+++++++.|.+.+..+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4689999999999999999999 99999999999999999999998775
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.95 E-value=5.8e-08 Score=85.55 Aligned_cols=155 Identities=13% Similarity=0.135 Sum_probs=106.2
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNS 197 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~ 197 (329)
..+.++||.|++|..+|+++..+.. ... ..++ . +++.++.. . .......+++|+..+++
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~iyv~GG~------~------~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRST--LGA--AVLN----G-LLYAVGGF------D------GSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS--CEE--EEET----T-EEEEEEEE------C------SSCEEEEEEEEETTTTE
T ss_pred cceEEECCCCCceeeCCCCCccccc--eEE--EEEC----C-EEEEEcCC------C------CCccCceEEEEeCCCCe
Confidence 5799999999999999988776542 111 1222 2 34444432 0 22345679999999999
Q ss_pred eEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC---ceEEEEEECCCcccccc-CCCCCCCCCceeEEE
Q 037927 198 WKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG---MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLG 273 (329)
Q Consensus 198 W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~---~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~ 273 (329)
|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|+.+ ++|... .....+
T Consensus 136 W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~ 201 (302)
T 2xn4_A 136 WFHVAP----MNTRR-----SSVG-VGVVGGLLYAVGG-YDVASRQCLSTVECYNATTNEWTYIAEMSTRR---SGAGVG 201 (302)
T ss_dssp EEEECC----CSSCC-----BSCE-EEEETTEEEEECC-EETTTTEECCCEEEEETTTTEEEEECCCSSCC---BSCEEE
T ss_pred EeecCC----CCCcc-----cCce-EEEECCEEEEEeC-CCCCCCccccEEEEEeCCCCcEEECCCCcccc---ccccEE
Confidence 999987 77655 3333 6788999999987 53321 45799999999999988 555433 234667
Q ss_pred EECCcEEEEEc--C--CEEEEEEeeeCCCccceEEeeccc
Q 037927 274 VVGGRLCLLAL--G--ANVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 274 ~~~g~L~~~~~--~--~~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
+.+|+|+++.. . ..-.+|.++-. ...|+++..||
T Consensus 202 ~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~ 239 (302)
T 2xn4_A 202 VLNNLLYAVGGHDGPLVRKSVEVYDPT--TNAWRQVADMN 239 (302)
T ss_dssp EETTEEEEECCBSSSSBCCCEEEEETT--TTEEEEECCCS
T ss_pred EECCEEEEECCCCCCcccceEEEEeCC--CCCEeeCCCCC
Confidence 78999999986 1 12357777752 35699984443
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.94 E-value=7.4e-08 Score=85.02 Aligned_cols=151 Identities=13% Similarity=0.164 Sum_probs=105.1
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc----ccceEEEEEc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC----IDIQGIVFTA 193 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~----~~~~~~vyss 193 (329)
..+.++||.|++|..+|+++..+.. ... ..++ . +++.++... ... ....+++|+.
T Consensus 118 ~~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~iyv~GG~~------------~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 118 YLFECYDTRTESWHTKPSMLTQRCS--HGM--VEAN----G-LIYVCGGSL------------GNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS--CEE--EEET----T-EEEEECCEE------------SCTTTCEECCCEEEEET
T ss_pred eeEEEEeCCCCceEeCCCCcCCcce--eEE--EEEC----C-EEEEECCCC------------CCCCcccccceEEEeCC
Confidence 5799999999999999988766532 111 2222 2 455554220 111 2678999999
Q ss_pred CCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccC-CceEEEEEECCCcccccc-CCCCCCCCCceeE
Q 037927 194 KTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEF-GMFGITAFDLATDKFSRV-PKPDFDYAHQAMG 271 (329)
Q Consensus 194 ~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~ 271 (329)
.+++|+.++. +|... .... .+.++|.+|.+++ .... ....+..||+.+++|..+ ++|... ....
T Consensus 177 ~~~~W~~~~~----~p~~r-----~~~~-~~~~~~~i~v~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~ 242 (306)
T 3ii7_A 177 ATETWTELCP----MIEAR-----KNHG-LVFVKDKIFAVGG-QNGLGGLDNVEYYDIKLNEWKMVSPMPWKG---VTVK 242 (306)
T ss_dssp TTTEEEEECC----CSSCC-----BSCE-EEEETTEEEEECC-EETTEEBCCEEEEETTTTEEEECCCCSCCB---SCCE
T ss_pred CCCeEEECCC----ccchh-----hcce-EEEECCEEEEEeC-CCCCCCCceEEEeeCCCCcEEECCCCCCCc---ccee
Confidence 9999999987 77655 3333 6788999999987 4322 146799999999999988 555543 2356
Q ss_pred EEEECCcEEEEEc----CCEEEEEEeeeCCCccceEEe
Q 037927 272 LGVVGGRLCLLAL----GANVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 272 l~~~~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~ 305 (329)
.++.+|+|+++.. ...-.+|.++-. ..+|+++
T Consensus 243 ~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~~W~~~ 278 (306)
T 3ii7_A 243 CAAVGSIVYVLAGFQGVGRLGHILEYNTE--TDKWVAN 278 (306)
T ss_dssp EEEETTEEEEEECBCSSSBCCEEEEEETT--TTEEEEE
T ss_pred EEEECCEEEEEeCcCCCeeeeeEEEEcCC--CCeEEeC
Confidence 6777999999987 233467887753 3569999
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.93 E-value=5.8e-08 Score=85.95 Aligned_cols=154 Identities=9% Similarity=0.019 Sum_probs=105.6
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNS 197 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~ 197 (329)
..+.++||.|++|..+|+++..+.. ... ..++ . +++.++.. . .......+++|+..+++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~iyv~GG~------~------~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNR--IGV--GVID----G-HIYAVGGS------H------GCIHHNSVERYEPERDE 148 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBT--CEE--EEET----T-EEEEECCE------E------TTEECCCEEEEETTTTE
T ss_pred ceEEEECCCCCeEeECCCCCcCccc--cEE--EEEC----C-EEEEEcCC------C------CCcccccEEEECCCCCe
Confidence 4789999999999999988776542 111 1222 2 45555422 0 22345679999999999
Q ss_pred eEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-ceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE
Q 037927 198 WKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV 275 (329)
Q Consensus 198 W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~ 275 (329)
|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|..+ ++|... .....++.
T Consensus 149 W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~ 214 (308)
T 1zgk_A 149 WHLVAP----MLTRR-----IGVG-VAVLNRLLYAVGG-FDGTNRLNSAECYYPERNEWRMITAMNTIR---SGAGVCVL 214 (308)
T ss_dssp EEECCC----CSSCC-----BSCE-EEEETTEEEEECC-BCSSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEE
T ss_pred EeECCC----CCccc-----cceE-EEEECCEEEEEeC-CCCCCcCceEEEEeCCCCeEeeCCCCCCcc---ccceEEEE
Confidence 999987 77655 3333 6788999999987 54322 56799999999999987 445433 23456677
Q ss_pred CCcEEEEEc----CCEEEEEEeeeCCCccceEEeecc
Q 037927 276 GGRLCLLAL----GANVELWVMKEYGVKCSWQKHYCL 308 (329)
Q Consensus 276 ~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~~~~ 308 (329)
+++|+++.. ...-.+|+++-. ...|+++..|
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~ 249 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVE--TETWTFVAPM 249 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETT--TTEEEECCCC
T ss_pred CCEEEEEeCCCCCCccceEEEEeCC--CCcEEECCCC
Confidence 999999986 223467777642 3569998443
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.92 E-value=1.1e-07 Score=84.16 Aligned_cols=155 Identities=10% Similarity=0.102 Sum_probs=106.2
Q ss_pred CceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCC
Q 037927 117 YREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTN 196 (329)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~ 196 (329)
...+.++||.|++|..+++++..+.. .. ...++ . +++.++.. . .......+++|+..++
T Consensus 136 ~~~~~~yd~~~~~W~~~~~~p~~r~~--~~--~~~~~----~-~iyv~GG~------~------~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 136 HNSVERYEPERDEWHLVAPMLTRRIG--VG--VAVLN----R-LLYAVGGF------D------GTNRLNSAECYYPERN 194 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS--CE--EEEET----T-EEEEECCB------C------SSCBCCCEEEEETTTT
T ss_pred cccEEEECCCCCeEeECCCCCccccc--eE--EEEEC----C-EEEEEeCC------C------CCCcCceEEEEeCCCC
Confidence 35789999999999999987766532 11 12222 2 45555422 0 1223568999999999
Q ss_pred ceEEecccCcccccccccccccCCCceeEECceeeEEeeccccC-CceEEEEEECCCcccccc-CCCCCCCCCceeEEEE
Q 037927 197 SWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEF-GMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGV 274 (329)
Q Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~ 274 (329)
+|+.++. +|... .... .+.++|.+|.+++ .... ....+..||+.+++|..+ ++|... .....++
T Consensus 195 ~W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~ 260 (308)
T 1zgk_A 195 EWRMITA----MNTIR-----SGAG-VCVLHNCIYAAGG-YDGQDQLNSVERYDVETETWTFVAPMKHRR---SALGITV 260 (308)
T ss_dssp EEEECCC----CSSCC-----BSCE-EEEETTEEEEECC-BCSSSBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEE
T ss_pred eEeeCCC----CCCcc-----ccce-EEEECCEEEEEeC-CCCCCccceEEEEeCCCCcEEECCCCCCCc---cceEEEE
Confidence 9999987 77655 3333 6788999999987 4322 146899999999999988 454433 2346667
Q ss_pred ECCcEEEEEc----CCEEEEEEeeeCCCccceEEeecc
Q 037927 275 VGGRLCLLAL----GANVELWVMKEYGVKCSWQKHYCL 308 (329)
Q Consensus 275 ~~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~~~~ 308 (329)
.+|+|+++.. ...-.+|.++-. ...|+++..|
T Consensus 261 ~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~ 296 (308)
T 1zgk_A 261 HQGRIYVLGGYDGHTFLDSVECYDPD--TDTWSEVTRM 296 (308)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETT--TTEEEEEEEC
T ss_pred ECCEEEEEcCcCCCcccceEEEEcCC--CCEEeecCCC
Confidence 8999999986 223467777753 3569999333
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.92 E-value=1.9e-07 Score=82.97 Aligned_cols=155 Identities=10% Similarity=0.126 Sum_probs=105.5
Q ss_pred EEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCceE
Q 037927 120 IFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNSWK 199 (329)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 199 (329)
+.++||.|++|..+|+++..+.. ... ..++ . +++.++... .. .......+++|+..+++|+
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~iyv~GG~~----~~------~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCL--FGL--GEVD----D-KIYVVAGKD----LQ------TEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCS--CEE--EEET----T-EEEEEEEEB----TT------TCCEEEEEEEEETTTTEEE
T ss_pred EEEEeCCCCcEEECCCCCccccc--cce--EEEC----C-EEEEEcCcc----CC------CCcccceEEEEeCCCCCEe
Confidence 88999999999999988776532 111 1221 2 344454320 00 1234567999999999999
Q ss_pred EecccCcccccccccccccCCCceeEECceeeEEeeccccC--CceEEEEEECCCcccccc-CCCCCCCCCceeEEEEEC
Q 037927 200 KVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEF--GMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVVG 276 (329)
Q Consensus 200 ~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~ 276 (329)
.++. +|... .... .+.++|.+|.+++ .... ....+..||+.+++|+.+ ++|... .....++.+
T Consensus 141 ~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~ 206 (318)
T 2woz_A 141 EVKN----LPIKV-----YGHN-VISHNGMIYCLGG-KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR---SMFGVAIHK 206 (318)
T ss_dssp EECC----CSSCE-----ESCE-EEEETTEEEEECC-EESSSCBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEET
T ss_pred ECCC----CCCcc-----cccE-EEEECCEEEEEcC-CCCCCCccceEEEEcCCCCEEEECCCCCCCc---ccceEEEEC
Confidence 9987 77665 3333 6779999999987 4321 145799999999999988 455433 234567789
Q ss_pred CcEEEEEc--CC--EEEEEEeeeCCCccceEEeeccc
Q 037927 277 GRLCLLAL--GA--NVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 277 g~L~~~~~--~~--~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
|+|+++.. .. .-.+|.++-. ...|+++..||
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p 241 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLK--TNKWEVMTEFP 241 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETT--TCCEEECCCCS
T ss_pred CEEEEEcCcCCCCccceEEEEECC--CCeEEECCCCC
Confidence 99999987 22 3467777642 35699985544
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.92 E-value=5.6e-08 Score=86.26 Aligned_cols=157 Identities=10% Similarity=0.063 Sum_probs=107.1
Q ss_pred eEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCce
Q 037927 119 EIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNSW 198 (329)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~W 198 (329)
.+.++||.|++|..+|+++..+.. ... ..++ . +++.++... ..+ .......+++|+..+++|
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~lyv~GG~~---~~~------~~~~~~~~~~~d~~~~~W 129 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCL--FGL--GEAL----N-SIYVVGGRE---IKD------GERCLDSVMCYDRLSFKW 129 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEES--CEE--EEET----T-EEEEECCEE---SST------TCCBCCCEEEEETTTTEE
T ss_pred ceEEecCCCCeEEECCCCCcchhc--eeE--EEEC----C-EEEEEeCCc---CCC------CCcccceEEEECCCCCcE
Confidence 488999999999999988765432 111 1221 2 455554220 000 234567899999999999
Q ss_pred EEecccCcccccccccccccCCCceeEECceeeEEeeccccC--CceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE
Q 037927 199 KKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEF--GMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV 275 (329)
Q Consensus 199 ~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~ 275 (329)
+.++. +|... .... .+.++|.+|.+++ .... ....+..||+.+++|+.+ ++|... .....++.
T Consensus 130 ~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~ 195 (315)
T 4asc_A 130 GESDP----LPYVV-----YGHT-VLSHMDLVYVIGG-KGSDRKCLNKMCVYDPKKFEWKELAPMQTAR---SLFGATVH 195 (315)
T ss_dssp EECCC----CSSCC-----BSCE-EEEETTEEEEECC-BCTTSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEE
T ss_pred eECCC----CCCcc-----ccee-EEEECCEEEEEeC-CCCCCcccceEEEEeCCCCeEEECCCCCCch---hceEEEEE
Confidence 99987 77665 3333 7889999999998 5221 156899999999999988 455443 33566778
Q ss_pred CCcEEEEEc----CCEEEEEEeeeCCCccceEEeeccc
Q 037927 276 GGRLCLLAL----GANVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 276 ~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
+|+|+++.. ...-.+|.++-. ...|+++..||
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p 231 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSIT--DNKWAPFEAFP 231 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETT--TTEEEEECCCS
T ss_pred CCEEEEEeccCCCCccceEEEEECC--CCeEEECCCCC
Confidence 999999987 224477888753 35799994443
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.89 E-value=8.9e-08 Score=84.25 Aligned_cols=155 Identities=7% Similarity=0.054 Sum_probs=105.9
Q ss_pred ceEEEEcCcccc---eeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcC
Q 037927 118 REIFIWNPSTGA---YTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAK 194 (329)
Q Consensus 118 ~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~ 194 (329)
..+.++||.|++ |..+++++..+.. ... ..++ . +++.++.. . .......+++|+..
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~lyv~GG~------~------~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGL--AGA--TTLG----D-MIYVSGGF------D------GSRRHTSMERYDPN 136 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBS--CEE--EEET----T-EEEEECCB------C------SSCBCCEEEEEETT
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccc--eeE--EEEC----C-EEEEEccc------C------CCcccceEEEEcCC
Confidence 579999999999 9999888766542 111 2222 2 45555522 0 12235679999999
Q ss_pred CCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccC-CceEEEEEECCCcccccc-CCCCCCCCCceeEE
Q 037927 195 TNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEF-GMFGITAFDLATDKFSRV-PKPDFDYAHQAMGL 272 (329)
Q Consensus 195 t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l 272 (329)
+++|+.++. +|... .... .+.++|.+|.+++ .... ....+..||+.+++|+.+ ++|... .....
T Consensus 137 ~~~W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~ 202 (301)
T 2vpj_A 137 IDQWSMLGD----MQTAR-----EGAG-LVVASGVIYCLGG-YDGLNILNSVEKYDPHTGHWTNVTPMATKR---SGAGV 202 (301)
T ss_dssp TTEEEEEEE----CSSCC-----BSCE-EEEETTEEEEECC-BCSSCBCCCEEEEETTTTEEEEECCCSSCC---BSCEE
T ss_pred CCeEEECCC----CCCCc-----ccce-EEEECCEEEEECC-CCCCcccceEEEEeCCCCcEEeCCCCCccc---ccceE
Confidence 999999987 77555 3333 6788999999987 5432 256899999999999988 455443 23466
Q ss_pred EEECCcEEEEEc----CCEEEEEEeeeCCCccceEEeeccc
Q 037927 273 GVVGGRLCLLAL----GANVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 273 ~~~~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
+..+++|+++.. ...-.+|.++-. ...|+++..||
T Consensus 203 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p 241 (301)
T 2vpj_A 203 ALLNDHIYVVGGFDGTAHLSSVEAYNIR--TDSWTTVTSMT 241 (301)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEEECCCS
T ss_pred EEECCEEEEEeCCCCCcccceEEEEeCC--CCcEEECCCCC
Confidence 778999999987 113456777642 35699984443
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.89 E-value=5.2e-08 Score=86.03 Aligned_cols=168 Identities=11% Similarity=0.080 Sum_probs=111.4
Q ss_pred ccccEEEEEc----CCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 106 CHGLICLALD----NYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 106 ~~Glll~~~~----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.+|.|.+... ....+.++||.|++|..+|+++..+.. ... ..++ . +++.++.. .. .
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~iyv~GG~-----~~------~ 113 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS--LAA--CAAE----G-KIYTSGGS-----EV------G 113 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS--CEE--EEET----T-EEEEECCB-----BT------T
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc--eeE--EEEC----C-EEEEECCC-----CC------C
Confidence 4555544412 246799999999999999888766532 111 2222 2 35555521 00 1
Q ss_pred CcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-----ceEEEEEECCCcccc
Q 037927 182 RCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-----MFGITAFDLATDKFS 256 (329)
Q Consensus 182 ~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-----~~~i~~fD~~~~~~~ 256 (329)
......+++|+..+++|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|+
T Consensus 114 ~~~~~~~~~~d~~~~~W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 114 NSALYLFECYDTRTESWHTKPS----MLTQR-----CSHG-MVEANGLIYVCGG-SLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp BSCCCCEEEEETTTTEEEEECC----CSSCC-----BSCE-EEEETTEEEEECC-EESCTTTCEECCCEEEEETTTTEEE
T ss_pred CcEeeeEEEEeCCCCceEeCCC----CcCCc-----ceeE-EEEECCEEEEECC-CCCCCCcccccceEEEeCCCCCeEE
Confidence 2345689999999999999987 77655 3333 6788999999987 43321 467999999999999
Q ss_pred cc-CCCCCCCCCceeEEEEECCcEEEEEc--CC--EEEEEEeeeCCCccceEEeeccc
Q 037927 257 RV-PKPDFDYAHQAMGLGVVGGRLCLLAL--GA--NVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 257 ~i-~lP~~~~~~~~~~l~~~~g~L~~~~~--~~--~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
.+ ++|... .....++.+|+|+++.. .. .-.+|.++-. ...|+++..||
T Consensus 183 ~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p 235 (306)
T 3ii7_A 183 ELCPMIEAR---KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK--LNEWKMVSPMP 235 (306)
T ss_dssp EECCCSSCC---BSCEEEEETTEEEEECCEETTEEBCCEEEEETT--TTEEEECCCCS
T ss_pred ECCCccchh---hcceEEEECCEEEEEeCCCCCCCCceEEEeeCC--CCcEEECCCCC
Confidence 88 455443 33566777999999976 22 2356777642 35699985444
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.88 E-value=1.7e-07 Score=82.36 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=111.9
Q ss_pred ccccEEEEEc-----CCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCC
Q 037927 106 CHGLICLALD-----NYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDN 180 (329)
Q Consensus 106 ~~Glll~~~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (329)
.+|.|.+... ....+.++||.|++|..+++++..+.. .....++ . +++.++.. +
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~----~-~iyv~GG~------~------ 169 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG----AGLVVAS----G-VIYCLGGY------D------ 169 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS----CEEEEET----T-EEEEECCB------C------
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc----ceEEEEC----C-EEEEECCC------C------
Confidence 3566655412 135799999999999999877765432 1122222 2 35555422 0
Q ss_pred CCcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-ceEEEEEECCCcccccc-
Q 037927 181 SRCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-MFGITAFDLATDKFSRV- 258 (329)
Q Consensus 181 ~~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-~~~i~~fD~~~~~~~~i- 258 (329)
.......+++|+..+++|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|..+
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~----~p~~r-----~~~~-~~~~~~~i~v~GG-~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTP----MATKR-----SGAG-VALLNDHIYVVGG-FDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECC----CSSCC-----BSCE-EEEETTEEEEECC-BCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCcccceEEEEeCCCCcEEeCCC----CCccc-----ccce-EEEECCEEEEEeC-CCCCcccceEEEEeCCCCcEEECC
Confidence 22345789999999999999987 77655 3333 7888999999988 54322 46899999999999988
Q ss_pred CCCCCCCCCceeEEEEECCcEEEEEc----CCEEEEEEeeeCCCccceEEeeccc
Q 037927 259 PKPDFDYAHQAMGLGVVGGRLCLLAL----GANVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 259 ~lP~~~~~~~~~~l~~~~g~L~~~~~----~~~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
++|... .....+..+|+|+++.. ...-.||.++-. ..+|+++..||
T Consensus 239 ~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~ 288 (301)
T 2vpj_A 239 SMTTPR---CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI--IDSWEVVTSMG 288 (301)
T ss_dssp CCSSCC---BSCEEEEETTEEEEECCBCSSSBEEEEEEEETT--TTEEEEEEEEE
T ss_pred CCCCcc---cceeEEEECCEEEEEcCcCCCcccccEEEEcCC--CCeEEEcCCCC
Confidence 455433 23456677999999986 223577888753 35699994433
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.81 E-value=2.4e-07 Score=82.19 Aligned_cols=152 Identities=12% Similarity=0.160 Sum_probs=105.8
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNS 197 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~ 197 (329)
..+.++||.|++|..+++++..+.. .. ...++ . +++.++.. .. .......+++|+..+++
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~--~~--~~~~~----~-~iyv~GG~-----~~------~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYG--HT--VLSHM----D-LVYVIGGK-----GS------DRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS--CE--EEEET----T-EEEEECCB-----CT------TSCBCCCEEEEETTTTE
T ss_pred ceEEEECCCCCcEeECCCCCCcccc--ee--EEEEC----C-EEEEEeCC-----CC------CCcccceEEEEeCCCCe
Confidence 5699999999999999988766532 11 12222 2 45555521 00 23345789999999999
Q ss_pred eEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-ceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE
Q 037927 198 WKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV 275 (329)
Q Consensus 198 W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~ 275 (329)
|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|+.+ ++|... ....++..
T Consensus 177 W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~ 242 (315)
T 4asc_A 177 WKELAP----MQTAR-----SLFG-ATVHDGRIIVAAG-VTDTGLTSSAEVYSITDNKWAPFEAFPQER---SSLSLVSL 242 (315)
T ss_dssp EEECCC----CSSCC-----BSCE-EEEETTEEEEEEE-ECSSSEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEE
T ss_pred EEECCC----CCCch-----hceE-EEEECCEEEEEec-cCCCCccceEEEEECCCCeEEECCCCCCcc---cceeEEEE
Confidence 999987 77655 3333 7788999999988 54322 56899999999999988 445433 23466778
Q ss_pred CCcEEEEEc-CC------------EEEEEEeeeCCCccceEEe
Q 037927 276 GGRLCLLAL-GA------------NVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 276 ~g~L~~~~~-~~------------~l~vW~l~~~~~~~~W~~~ 305 (329)
+|+|+++.. .. .-.+|+++-. ...|+++
T Consensus 243 ~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 283 (315)
T 4asc_A 243 VGTLYAIGGFATLETESGELVPTELNDIWRYNEE--EKKWEGV 283 (315)
T ss_dssp TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT--TTEEEEE
T ss_pred CCEEEEECCccccCcCCccccccccCcEEEecCC--CChhhhh
Confidence 999999986 11 2367888753 3569988
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.76 E-value=2.6e-07 Score=82.01 Aligned_cols=152 Identities=15% Similarity=0.268 Sum_probs=103.8
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNS 197 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~ 197 (329)
..+.++||.|++|..+++++..+.. .....++ . +++.++... . .......+++|+..+++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~----~~~~~~~----~-~iyv~GG~~-----~------~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYG----HNVISHN----G-MIYCLGGKT-----D------DKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEES----CEEEEET----T-EEEEECCEE-----S------SSCBCCCEEEEETTTTE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccc----cEEEEEC----C-EEEEEcCCC-----C------CCCccceEEEEcCCCCE
Confidence 4688999999999999877765432 1111222 2 455554210 0 22335679999999999
Q ss_pred eEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-ceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE
Q 037927 198 WKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV 275 (329)
Q Consensus 198 W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~ 275 (329)
|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|+.+ ++|... ....+++.
T Consensus 187 W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~ 252 (318)
T 2woz_A 187 WKDLAP----MKTPR-----SMFG-VAIHKGKIVIAGG-VTEDGLSASVEAFDLKTNKWEVMTEFPQER---SSISLVSL 252 (318)
T ss_dssp EEEECC----CSSCC-----BSCE-EEEETTEEEEEEE-EETTEEEEEEEEEETTTCCEEECCCCSSCC---BSCEEEEE
T ss_pred EEECCC----CCCCc-----ccce-EEEECCEEEEEcC-cCCCCccceEEEEECCCCeEEECCCCCCcc---cceEEEEE
Confidence 999987 77655 2333 6789999999987 54321 46789999999999988 555443 23466788
Q ss_pred CCcEEEEEc-CC------------EEEEEEeeeCCCccceEEe
Q 037927 276 GGRLCLLAL-GA------------NVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 276 ~g~L~~~~~-~~------------~l~vW~l~~~~~~~~W~~~ 305 (329)
+|+|+++.. .. .-.+|.++-. +..|+++
T Consensus 253 ~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 293 (318)
T 2woz_A 253 AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD--KKEWAGM 293 (318)
T ss_dssp TTEEEEECCBCCBC----CCBCCBCCCEEEEETT--TTEEEEE
T ss_pred CCEEEEECCeeccCCCCceeccceeeeEEEEeCC--CCEehhh
Confidence 999999876 11 2468888753 3569987
No 14
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.73 E-value=4.3e-07 Score=79.91 Aligned_cols=156 Identities=13% Similarity=0.121 Sum_probs=105.4
Q ss_pred CceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCC
Q 037927 117 YREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTN 196 (329)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~ 196 (329)
...+.++||.+++|..+++++..+.. ... ..++ . +++.++.. . .......+++|+..++
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~--~~~~----~-~lyv~GG~------~------~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCR--AGM--VYMA----G-LVFAVGGF------N------GSLRVRTVDSYDPVKD 87 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBS--CEE--EEET----T-EEEEESCB------C------SSSBCCCEEEEETTTT
T ss_pred CCcEEEEcCcCCcEeEcccCCccccc--ceE--EEEC----C-EEEEEeCc------C------CCccccceEEECCCCC
Confidence 35688999999999999877765532 111 1221 2 34445421 0 1233467899999999
Q ss_pred ceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC-ceEEEEEECCCcccccc-CCCCCCCCCceeEEEE
Q 037927 197 SWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG-MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGV 274 (329)
Q Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~-~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~ 274 (329)
+|+.++. +|... .... .+.++|.+|.+++ ..... ...+..||+.+++|..+ ++|... .....++
T Consensus 88 ~W~~~~~----~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~ 153 (302)
T 2xn4_A 88 QWTSVAN----MRDRR-----STLG-AAVLNGLLYAVGG-FDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGV 153 (302)
T ss_dssp EEEEECC----CSSCC-----BSCE-EEEETTEEEEEEE-ECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEE
T ss_pred ceeeCCC----CCccc-----cceE-EEEECCEEEEEcC-CCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEE
Confidence 9999987 77655 2333 6788999999988 54322 46899999999999988 455433 2346677
Q ss_pred ECCcEEEEEc--CC----EEEEEEeeeCCCccceEEeeccc
Q 037927 275 VGGRLCLLAL--GA----NVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 275 ~~g~L~~~~~--~~----~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
.+|+|+++.. .. .-.+|.++-. ...|+++..||
T Consensus 154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p 192 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASRQCLSTVECYNAT--TNEWTYIAEMS 192 (302)
T ss_dssp ETTEEEEECCEETTTTEECCCEEEEETT--TTEEEEECCCS
T ss_pred ECCEEEEEeCCCCCCCccccEEEEEeCC--CCcEEECCCCc
Confidence 8999999986 21 2357777642 35699984443
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.66 E-value=8.2e-07 Score=80.05 Aligned_cols=173 Identities=15% Similarity=0.106 Sum_probs=106.6
Q ss_pred cccEEEEEc-CCceEEEEcCc--ccceeeCCCCC-CCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCC
Q 037927 107 HGLICLALD-NYREIFIWNPS--TGAYTKLPADP-DATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSR 182 (329)
Q Consensus 107 ~Glll~~~~-~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (329)
+|.|.+... ....+.++||. +++|..+|+++ ..+.. ... ..++ . +++.++...+ .... ..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~--~~~--~~~~----~-~lyv~GG~~~-~~~~------~~ 82 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ--ATS--AFID----G-NLYVFGGIGK-NSEG------LT 82 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS--CEE--EEET----T-EEEEECCEEE-CTTS------CE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc--ceE--EEEC----C-EEEEEcCCCC-CCCc------cc
Confidence 555544412 34589999998 59999999877 44432 111 2222 2 3444442100 0000 12
Q ss_pred cccceEEEEEcCCCceEEecccCcccc-cccccccccCCCceeEECceeeEEeeccccC---------------------
Q 037927 183 CIDIQGIVFTAKTNSWKKVEHSFGSIH-CCCEARNLQGRPMGTLVNESLHWLTNNQCEF--------------------- 240 (329)
Q Consensus 183 ~~~~~~~vyss~t~~W~~~~~~~~~~p-~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--------------------- 240 (329)
.....+++|+..+++|+.++. ++ ... .... .+..+|.+|.+++ ....
T Consensus 83 ~~~~~v~~yd~~~~~W~~~~~----~~p~~r-----~~~~-~~~~~~~iyv~GG-~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVKLMS----HAPMGM-----AGHV-TFVHNGKAYVTGG-VNQNIFNGYFEDLNEAGKDSTAIDK 151 (357)
T ss_dssp EECCCEEEEETTTTEEEECSC----CCSSCC-----SSEE-EEEETTEEEEEEC-CCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred eeeccEEEEeCCCCcEEECCC----CCCccc-----ccce-EEEECCEEEEEeC-cCCCcCcccccchhhcCCcccchhh
Confidence 335679999999999999987 55 433 2222 5679999999987 4321
Q ss_pred --------------CceEEEEEECCCcccccc-CCCCCCCCCceeEEEEECCcEEEEEc---C--CEEEEEEeeeCCCcc
Q 037927 241 --------------GMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVVGGRLCLLAL---G--ANVELWVMKEYGVKC 300 (329)
Q Consensus 241 --------------~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~g~L~~~~~---~--~~l~vW~l~~~~~~~ 300 (329)
....+..||+.+++|+.+ ++|.... ....+++.+++|+++.. . ..-.+|.++-+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 152 INAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 026899999999999988 5564322 22567778999999976 1 133567765322245
Q ss_pred ceEEeecc
Q 037927 301 SWQKHYCL 308 (329)
Q Consensus 301 ~W~~~~~~ 308 (329)
.|+++..|
T Consensus 230 ~W~~~~~~ 237 (357)
T 2uvk_A 230 KWNKLAPV 237 (357)
T ss_dssp EEEECCCS
T ss_pred cEEecCCC
Confidence 79998444
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.60 E-value=7.7e-06 Score=75.64 Aligned_cols=47 Identities=32% Similarity=0.409 Sum_probs=42.0
Q ss_pred CCCCcHHHHHHHHhcCCcchhhhhhhchHhhHhhcCChhHHHHHhhh
Q 037927 1 MSNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLISDPGFALLQYKR 47 (329)
Q Consensus 1 ~~~LP~Dll~eIL~rLp~~~l~r~~~VcK~W~~li~~~~F~~~~~~~ 47 (329)
++.||+|++.+||++|++++|.++.+|||+|+.++.++.+-+.....
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 46799999999999999999999999999999999998877766543
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.56 E-value=4e-06 Score=75.47 Aligned_cols=111 Identities=13% Similarity=0.092 Sum_probs=71.3
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCC--ceEEEEEEC--CCcccccc-CC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFG--MFGITAFDL--ATDKFSRV-PK 260 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~--~~~i~~fD~--~~~~~~~i-~l 260 (329)
..+++|+..+++|+.++. +|... . .... .+.++|.+|.+++ ..... ...+..||+ .+.+|+.+ ++
T Consensus 168 ~~v~~yd~~~~~W~~~~~----~p~~~---~-~~~~-~~~~~~~iyv~GG-~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE----SPWYG---T-AGAA-VVNKGDKTWLING-EAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp CEEEEEETTTTEEEEEEE----CSSCC---C-BSCE-EEEETTEEEEECC-EEETTEECCCEEEEECC---CEEEECCCS
T ss_pred ccEEEEeCCCCcEEECCC----CCCCC---c-cccc-EEEECCEEEEEee-ecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 689999999999999987 77543 1 2223 7888999999987 43221 345777876 89999987 44
Q ss_pred CCCCCCCceeEEEEECCcEEEEEc--CC-------------------EEEEEEeeeCCCccceEEeeccc
Q 037927 261 PDFDYAHQAMGLGVVGGRLCLLAL--GA-------------------NVELWVMKEYGVKCSWQKHYCLG 309 (329)
Q Consensus 261 P~~~~~~~~~~l~~~~g~L~~~~~--~~-------------------~l~vW~l~~~~~~~~W~~~~~~~ 309 (329)
|..... .....++.+|+|+++.. .. .-.+|+++-. ...|+++..||
T Consensus 238 ~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p 304 (357)
T 2uvk_A 238 SSPDGV-AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELS 304 (357)
T ss_dssp STTTCC-BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECS
T ss_pred CCCccc-ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCC
Confidence 433221 23457788999999885 10 1356666642 35699994443
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.46 E-value=3e-05 Score=71.89 Aligned_cols=39 Identities=13% Similarity=0.422 Sum_probs=36.0
Q ss_pred CCCcHHHHHHHHhcCCcchhhhhhhchHhhHhhcCC-hhH
Q 037927 2 SNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLISD-PGF 40 (329)
Q Consensus 2 ~~LP~Dll~eIL~rLp~~~l~r~~~VcK~W~~li~~-~~F 40 (329)
+.||+|++.+||++||+++|.++..|||+|+.++.+ +..
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~ 55 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSL 55 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 469999999999999999999999999999999997 553
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.42 E-value=4.4e-06 Score=77.19 Aligned_cols=44 Identities=30% Similarity=0.405 Sum_probs=38.4
Q ss_pred CCCcHH----HHHHHHhcCCcchhhhhhhchHhhHhhcCChhHHHHHh
Q 037927 2 SNLPDD----VLIEVLSRLPVKSLLRFKCACKQWLSLISDPGFALLQY 45 (329)
Q Consensus 2 ~~LP~D----ll~eIL~rLp~~~l~r~~~VcK~W~~li~~~~F~~~~~ 45 (329)
+.||+| |+.+||++|++++|.++.+|||+|+.++.++.+=+...
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~ 59 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLI 59 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 459999 99999999999999999999999999999776544443
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.19 E-value=2.2e-05 Score=77.36 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=94.9
Q ss_pred CceEEEEcCcccceeeCC-C-----CCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEE
Q 037927 117 YREIFIWNPSTGAYTKLP-A-----DPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIV 190 (329)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~v 190 (329)
...+.++||.|++|..++ + ++..+. . . ....-.. +. +++.++.. . . .......+++
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~--~--h-s~~~~~~-~~-~lyv~GG~----~-~------~~~~~~dv~~ 472 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARM--C--H-TFTTISR-NN-QLLLIGGR----K-A------PHQGLSDNWI 472 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCB--S--C-EEEEETT-TT-EEEEECCB----S-S------TTCBCCCCEE
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCcccc--c--e-EEEEEcc-CC-EEEEEcCC----C-C------CCCccccEEE
Confidence 357999999999999988 5 233222 1 1 2222110 12 35555522 0 0 1113457999
Q ss_pred EEcCCCceEEecccCcccccccccccccCCCceeEE-CceeeEEeeccccCCceEEEEEECCCccccccC----CCCCCC
Q 037927 191 FTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV-NESLHWLTNNQCEFGMFGITAFDLATDKFSRVP----KPDFDY 265 (329)
Q Consensus 191 yss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~----lP~~~~ 265 (329)
|+..+++|+.++. +|... .... .+.+ +|.+|..++ ..... .+..||+.+++|+.+. +|....
T Consensus 473 yd~~t~~W~~~~~----~p~~R-----~~h~-~~~~~~~~iyv~GG-~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 473 FDMKTREWSMIKS----LSHTR-----FRHS-ACSLPDGNVLILGG-VTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp EETTTTEEEECCC----CSBCC-----BSCE-EEECTTSCEEEECC-BCSSC--SEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred EeCCCCcEEECCC----CCCCc-----ccce-EEEEcCCEEEEECC-CCCCC--CEEEEECCCCceEEccCCCCCCCccc
Confidence 9999999999987 77655 3333 5564 999999988 54432 8999999999999885 444332
Q ss_pred CCceeEEEEEC---CcEEEEEc--CC----EEEEEEeeeCCCc----cceEEe
Q 037927 266 AHQAMGLGVVG---GRLCLLAL--GA----NVELWVMKEYGVK----CSWQKH 305 (329)
Q Consensus 266 ~~~~~~l~~~~---g~L~~~~~--~~----~l~vW~l~~~~~~----~~W~~~ 305 (329)
....++.+ |+|++++. .. .-.+|.++-.... ..|+++
T Consensus 540 ---~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 540 ---VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK 589 (695)
T ss_dssp ---BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred ---ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence 22323333 88999986 11 2356666542211 138888
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.97 E-value=2.3e-06 Score=73.89 Aligned_cols=47 Identities=26% Similarity=0.326 Sum_probs=42.7
Q ss_pred CCCcHHHHHHHHhcCCcchhhhhhhchHhhHhhcCChhHHHHHhhhc
Q 037927 2 SNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLISDPGFALLQYKRT 48 (329)
Q Consensus 2 ~~LP~Dll~eIL~rLp~~~l~r~~~VcK~W~~li~~~~F~~~~~~~~ 48 (329)
+.||+|++..||+.|++++|+++.+|||+||.+..++.-=+.+..+.
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 46999999999999999999999999999999999998777766664
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.66 E-value=0.00033 Score=68.92 Aligned_cols=153 Identities=8% Similarity=0.082 Sum_probs=95.6
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCc
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNS 197 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~ 197 (329)
..+.++||.|++|..+++++..+.. . . +.... +. +++.++.. .... .+++|+..+++
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~--h-~-~~~~~---~~-~iyv~GG~-------------~~~~--~v~~yd~~t~~ 524 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFR--H-S-ACSLP---DG-NVLILGGV-------------TEGP--AMLLYNVTEEI 524 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBS--C-E-EEECT---TS-CEEEECCB-------------CSSC--SEEEEETTTTE
T ss_pred ccEEEEeCCCCcEEECCCCCCCccc--c-e-EEEEc---CC-EEEEECCC-------------CCCC--CEEEEECCCCc
Confidence 4689999999999999988766532 1 1 11111 12 34445421 1111 89999999999
Q ss_pred eEEecccCcccccccccccccCCCceeEEC---ceeeEEeeccccCC---ceEEEEEECCCcc------cccc-CCCCCC
Q 037927 198 WKKVEHSFGSIHCCCEARNLQGRPMGTLVN---ESLHWLTNNQCEFG---MFGITAFDLATDK------FSRV-PKPDFD 264 (329)
Q Consensus 198 W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~---G~lywl~~~~~~~~---~~~i~~fD~~~~~------~~~i-~lP~~~ 264 (329)
|+.++.. ..+|... .... ++.++ |.+|.+++ ....+ ...+..||+.+++ |..+ ..|...
T Consensus 525 W~~~~~~-g~~p~~r-----~~~~-a~v~~~~~~~iyv~GG-~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~ 596 (695)
T 2zwa_A 525 FKDVTPK-DEFFQNS-----LVSA-GLEFDPVSKQGIILGG-GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ 596 (695)
T ss_dssp EEECCCS-SGGGGSC-----CBSC-EEEEETTTTEEEEECC-BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC
T ss_pred eEEccCC-CCCCCcc-----ccee-EEEEeCCCCEEEEECC-cCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC
Confidence 9998741 1144433 2222 46667 88999988 53221 4689999999999 6665 333222
Q ss_pred CCCceeEEEEEC-CcEEEEEc-C------CEEEEEEeeeCCCccceEEe
Q 037927 265 YAHQAMGLGVVG-GRLCLLAL-G------ANVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 265 ~~~~~~~l~~~~-g~L~~~~~-~------~~l~vW~l~~~~~~~~W~~~ 305 (329)
. .....++.+ |+|++++. . ..-.||.++-. ...|+..
T Consensus 597 R--~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~--t~~W~~~ 641 (695)
T 2zwa_A 597 R--YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL--SETLTSI 641 (695)
T ss_dssp C--BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT--TTEEEEC
T ss_pred c--ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC--CCeEEEe
Confidence 1 234556667 99999987 1 13357777642 3569854
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.55 E-value=0.00059 Score=66.63 Aligned_cols=107 Identities=7% Similarity=0.043 Sum_probs=72.3
Q ss_pred eEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCce
Q 037927 119 EIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNSW 198 (329)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~W 198 (329)
.+.++||.|++|..++.++..+.. ......+..| -+++.++ +. ....+++|+..+++|
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~-~~~~~~~~~~-----g~lyv~G---------------G~-~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDM-FCPGISMDGN-----GQIVVTG---------------GN-DAKKTSLYDSSSDSW 277 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCC-SSCEEEECTT-----SCEEEEC---------------SS-STTCEEEEEGGGTEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCC-ccccccCCCC-----CCEEEeC---------------CC-CCCceEEecCcCCce
Confidence 688999999999998876554422 1111111111 2355555 11 123799999999999
Q ss_pred EEecccCcccccccccccccCCCceeEE-CceeeEEeeccccC--CceEEEEEECCCcccccc
Q 037927 199 KKVEHSFGSIHCCCEARNLQGRPMGTLV-NESLHWLTNNQCEF--GMFGITAFDLATDKFSRV 258 (329)
Q Consensus 199 ~~~~~~~~~~p~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~--~~~~i~~fD~~~~~~~~i 258 (329)
..++. ||... .... .+.+ +|.+|.+++ .... ....+..||+.+++|..+
T Consensus 278 ~~~~~----~~~~R-----~~~s-~~~~~dg~iyv~GG-~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 278 IPGPD----MQVAR-----GYQS-SATMSDGRVFTIGG-SWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp EECCC----CSSCC-----SSCE-EEECTTSCEEEECC-CCCSSSCCCCEEEEETTTTEEEEE
T ss_pred eECCC----CCccc-----cccc-eEEecCCeEEEEeC-cccCCcccccceEeCCCCCcceeC
Confidence 99987 77655 2222 5666 999999988 4322 146789999999999886
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.53 E-value=3.4e-05 Score=68.63 Aligned_cols=39 Identities=36% Similarity=0.716 Sum_probs=36.0
Q ss_pred CCCCcHHHHHHHHhcCCcchhhhhhhchHhhHhhcCChh
Q 037927 1 MSNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLISDPG 39 (329)
Q Consensus 1 ~~~LP~Dll~eIL~rLp~~~l~r~~~VcK~W~~li~~~~ 39 (329)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.++.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 468999999999999999999999999999999987655
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.52 E-value=0.00042 Score=67.72 Aligned_cols=152 Identities=11% Similarity=0.022 Sum_probs=92.2
Q ss_pred EEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCCceE
Q 037927 120 IFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTNSWK 199 (329)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 199 (329)
+..++|.+++|..+++++... . ..++-+. .=+++.++... . +.+ .. .......+++|+..+++|+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~---~----~~av~~~--~g~l~v~GG~~---~-~~~-~~-~~~~~~~~~~yd~~t~~w~ 232 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP---A----AAAIEPT--SGRVLMWSSYR---N-DAF-GG-SPGGITLTSSWDPSTGIVS 232 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC---S----EEEEETT--TTEEEEEEECC---C-TTT-CS-CCCSEEEEEEECTTTCCBC
T ss_pred cccCCCCCCeeeeeccCCCCc---e----eEEEEec--CCEEEEEeccc---c-ccc-cc-CCCCeEEEEEEeCCCCcEE
Confidence 456689999999877665421 1 1222222 12455555320 0 000 00 0112347899999999999
Q ss_pred EecccCcccccccccccccCCC-ceeEECceeeEEeeccccCCceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE-C
Q 037927 200 KVEHSFGSIHCCCEARNLQGRP-MGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV-G 276 (329)
Q Consensus 200 ~~~~~~~~~p~~~~~~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~ 276 (329)
.++. +|... . ..+. ..+..+|.+|..++ .. ...+..||+.+++|..+ ++|... .....+++ +
T Consensus 233 ~~~~----~~~~~---~-~~~~~~~~~~~g~lyv~GG-~~---~~~v~~yd~~t~~W~~~~~~~~~R---~~~s~~~~~d 297 (656)
T 1k3i_A 233 DRTV----TVTKH---D-MFCPGISMDGNGQIVVTGG-ND---AKKTSLYDSSSDSWIPGPDMQVAR---GYQSSATMSD 297 (656)
T ss_dssp CCEE----EECSC---C-CSSCEEEECTTSCEEEECS-SS---TTCEEEEEGGGTEEEECCCCSSCC---SSCEEEECTT
T ss_pred eCcc----cCCCC---C-CccccccCCCCCCEEEeCC-CC---CCceEEecCcCCceeECCCCCccc---cccceEEecC
Confidence 9876 66543 1 2222 13346899999988 54 23799999999999877 444432 33566777 9
Q ss_pred CcEEEEEc--C-----CEEEEEEeeeCCCccceEEe
Q 037927 277 GRLCLLAL--G-----ANVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 277 g~L~~~~~--~-----~~l~vW~l~~~~~~~~W~~~ 305 (329)
|+|+++.. . ..+++|-.+ ...|+++
T Consensus 298 g~iyv~GG~~~~~~~~~~~e~yd~~----t~~W~~~ 329 (656)
T 1k3i_A 298 GRVFTIGGSWSGGVFEKNGEVYSPS----SKTWTSL 329 (656)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETT----TTEEEEE
T ss_pred CeEEEEeCcccCCcccccceEeCCC----CCcceeC
Confidence 99999986 1 334444333 3569986
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.15 E-value=0.00016 Score=69.43 Aligned_cols=34 Identities=26% Similarity=0.506 Sum_probs=29.5
Q ss_pred CCCCcHHHHHHHHhcCC-cchhhhhhhchHhhHhh
Q 037927 1 MSNLPDDVLIEVLSRLP-VKSLLRFKCACKQWLSL 34 (329)
Q Consensus 1 ~~~LP~Dll~eIL~rLp-~~~l~r~~~VcK~W~~l 34 (329)
++.||||++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.67 E-value=0.00063 Score=65.24 Aligned_cols=33 Identities=21% Similarity=0.455 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHHhcC-CcchhhhhhhchHhhHhh
Q 037927 2 SNLPDDVLIEVLSRL-PVKSLLRFKCACKQWLSL 34 (329)
Q Consensus 2 ~~LP~Dll~eIL~rL-p~~~l~r~~~VcK~W~~l 34 (329)
+.||||++.+||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999987
No 28
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.70 E-value=21 Score=31.66 Aligned_cols=150 Identities=11% Similarity=0.128 Sum_probs=78.5
Q ss_pred EEEc-cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCC
Q 037927 101 RFIG-SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDD 179 (329)
Q Consensus 101 ~~~~-s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (329)
.+++ |.+++|.+. -+..+.|||..||+...+-..... ......+.+.+. +.|-+ .+.
T Consensus 109 ~~l~wS~~n~lAvg--ld~tV~lWd~~tg~~~~~~~~~~~----~~~V~sv~fspd-g~~la--sgs------------- 166 (420)
T 4gga_A 109 NLVDWSSGNVLAVA--LDNSVYLWSASSGDILQLLQMEQP----GEYISSVAWIKE-GNYLA--VGT------------- 166 (420)
T ss_dssp BCEEECTTSEEEEE--ETTEEEEEETTTCCEEEEEECCST----TCCEEEEEECTT-SSEEE--EEE-------------
T ss_pred eeEEECCCCEEEEE--eCCEEEEEECCCCCEEEEEEecCC----CCcEEEEEECCC-CCEEE--EEE-------------
Confidence 3444 567777665 467899999999987654322211 112345666664 33432 331
Q ss_pred CCCcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccC
Q 037927 180 NSRCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVP 259 (329)
Q Consensus 180 ~~~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~ 259 (329)
....+.||+..++.- +.. +.... ..-..+..+|.+...+. . ...+..+|..........
T Consensus 167 ----~Dg~v~iWd~~~~~~--~~~----~~~h~------~~v~~~s~~~~~l~sgs-~----d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 167 ----SSAEVQLWDVQQQKR--LRN----MTSHS------ARVGSLSWNSYILSSGS-R----SGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp ----TTSCEEEEETTTTEE--EEE----ECCCS------SCEEEEEEETTEEEEEE-T----TSEEEEEETTSSSCEEEE
T ss_pred ----CCCeEEEEEcCCCcE--EEE----EeCCC------CceEEEeeCCCEEEEEe-C----CCceeEeeecccceeeEE
Confidence 245688999887642 111 11111 11114555666544444 3 567778887765443333
Q ss_pred CCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeee
Q 037927 260 KPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~ 295 (329)
+..... ....+... +|+..+... ...+.||....
T Consensus 226 ~~~h~~--~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 226 LSGHSQ--EVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCSS--CEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred eccccc--ceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 322221 12223322 556555555 77888887653
No 29
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=75.66 E-value=32 Score=28.26 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=80.2
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
..+|.+.+.......+.++++..+....+..... .....++.+|+... ++... ..
T Consensus 129 ~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-----~~~p~~i~~~~~g~---l~v~~-----------------~~ 183 (286)
T 1q7f_A 129 DNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKH-----LEFPNGVVVNDKQE---IFISD-----------------NR 183 (286)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEEECTTT-----CSSEEEEEECSSSE---EEEEE-----------------GG
T ss_pred eCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCc-----cCCcEEEEECCCCC---EEEEE-----------------CC
Confidence 3466666653356788899986555544432211 12244677777532 33222 12
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCce-EEEEEECCCccccccCCC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMF-GITAFDLATDKFSRVPKP 261 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~-~i~~fD~~~~~~~~i~lP 261 (329)
...+.+|+.....-+.+.. .-.. ....++.+ +|.+|.... . .. .|..||...+....+..+
T Consensus 184 ~~~i~~~~~~g~~~~~~~~-----~g~~------~~p~~i~~d~~G~l~v~~~-~----~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGG-----EGIT------NYPIGVGINSNGEILIADN-H----NNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp GTEEEEEETTCCEEEEESC-----TTTS------CSEEEEEECTTCCEEEEEC-S----SSCEEEEECTTSCEEEEEEES
T ss_pred CCEEEEEcCCCCEEEEEcc-----CCcc------CCCcEEEECCCCCEEEEeC-C----CCEEEEEECCCCCEEEEEccc
Confidence 4567888875543333322 1000 11114444 577776554 2 33 899999876655555332
Q ss_pred CCCCCCceeEEEEE-CCcEEEEEcCCEEEEEEeee
Q 037927 262 DFDYAHQAMGLGVV-GGRLCLLALGANVELWVMKE 295 (329)
Q Consensus 262 ~~~~~~~~~~l~~~-~g~L~~~~~~~~l~vW~l~~ 295 (329)
.... ....++.. +|+|++.....++.||.+..
T Consensus 248 ~~~~--~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 248 VKHA--QCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp SCCS--CEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCC--cceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 2211 12345544 78888885588999998764
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=71.71 E-value=42 Score=29.79 Aligned_cols=148 Identities=7% Similarity=0.065 Sum_probs=73.8
Q ss_pred cc-cEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 107 HG-LICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 107 ~G-lll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
++ +|... ..+..+.|||..+++...+-..... ......+.+.|..+.+ ++... ..
T Consensus 131 ~~~~lasG-s~dg~i~lWd~~~~~~~~~~~~~gH----~~~V~~l~f~p~~~~~-l~s~s------------------~D 186 (435)
T 4e54_B 131 HPSTVAVG-SKGGDIMLWNFGIKDKPTFIKGIGA----GGSITGLKFNPLNTNQ-FYASS------------------ME 186 (435)
T ss_dssp CTTCEEEE-ETTSCEEEECSSCCSCCEEECCCSS----SCCCCEEEECSSCTTE-EEEEC------------------SS
T ss_pred CCCEEEEE-eCCCEEEEEECCCCCceeEEEccCC----CCCEEEEEEeCCCCCE-EEEEe------------------CC
Confidence 44 45444 5778999999998875432211111 1123356677654444 22222 23
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCCC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDY 265 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~ 265 (329)
..+.+++.+++.-+.... ..... . ....-.+.-+|.+...+. . ...|..+|+.++....+.. ...
T Consensus 187 ~~v~iwd~~~~~~~~~~~----~~~~~---~-~~~~~~~~~~~~~l~~g~-~----dg~i~~wd~~~~~~~~~~~--h~~ 251 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFAS----SDTIN---I-WFCSLDVSASSRMVVTGD-N----VGNVILLNMDGKELWNLRM--HKK 251 (435)
T ss_dssp SCEEEEETTSCEEEEEEC----CSSCS---C-CCCCEEEETTTTEEEEEC-S----SSBEEEEESSSCBCCCSBC--CSS
T ss_pred CEEEEeeccCCceeEEec----cCCCC---c-cEEEEEECCCCCEEEEEe-C----CCcEeeeccCcceeEEEec--ccc
Confidence 467888887765544432 11100 0 111102223555554444 3 4678888987665433321 111
Q ss_pred CCceeEEEEE-CCc-EEEEEc-CCEEEEEEeee
Q 037927 266 AHQAMGLGVV-GGR-LCLLAL-GANVELWVMKE 295 (329)
Q Consensus 266 ~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~~ 295 (329)
....+... ++. +++... +..+.||.+..
T Consensus 252 --~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 252 --KVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp --CEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred --eEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 12233333 343 554444 77888887643
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=71.10 E-value=42 Score=27.53 Aligned_cols=151 Identities=11% Similarity=0.044 Sum_probs=75.7
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
..+|.+.+.......+.++|+..+....++....... ......++.+++..+. ++... ...
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~-~~~~p~~i~~~~~~g~--l~v~~----------------~~~ 98 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDS-QLLYPNRVAVVRNSGD--IIVTE----------------RSP 98 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTT-CBSSEEEEEEETTTTE--EEEEE----------------CGG
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcc-cccCceEEEEEcCCCe--EEEEc----------------CCC
Confidence 4466666653456789999988665555554221111 1223445666543332 22222 111
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPD 262 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~ 262 (329)
...+.+|+.....-+.... +. .....++.+ +|.+|.... . ...|..||...+....+..+.
T Consensus 99 ~~~i~~~d~~g~~~~~~~~-----~~-------~~~~~~i~~~~~g~l~v~~~-~----~~~i~~~~~~g~~~~~~~~~~ 161 (286)
T 1q7f_A 99 THQIQIYNQYGQFVRKFGA-----TI-------LQHPRGVTVDNKGRIIVVEC-K----VMRVIIFDQNGNVLHKFGCSK 161 (286)
T ss_dssp GCEEEEECTTSCEEEEECT-----TT-------CSCEEEEEECTTSCEEEEET-T----TTEEEEECTTSCEEEEEECTT
T ss_pred CCEEEEECCCCcEEEEecC-----cc-------CCCceEEEEeCCCCEEEEEC-C----CCEEEEEcCCCCEEEEeCCCC
Confidence 3467777743332222221 10 001113333 687776543 2 468899998766555443332
Q ss_pred CCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEe
Q 037927 263 FDYAHQAMGLGVV-GGRLCLLAL-GANVELWVM 293 (329)
Q Consensus 263 ~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l 293 (329)
... ....++.. +|+|++... ...+.+|..
T Consensus 162 ~~~--~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 162 HLE--FPNGVVVNDKQEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp TCS--SEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred ccC--CcEEEEECCCCCEEEEECCCCEEEEEcC
Confidence 211 12234443 578877776 667777754
No 32
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=70.15 E-value=50 Score=28.04 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=83.4
Q ss_pred ccccccEEEEEc-CCceEEEEcCcccceeeCCCCCCC---CCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCC
Q 037927 104 GSCHGLICLALD-NYREIFIWNPSTGAYTKLPADPDA---TYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDD 179 (329)
Q Consensus 104 ~s~~Glll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~---~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (329)
+..+|.+.+... ...++.++++..+....+...... .........++.+|+..+. +++..
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~--l~v~d-------------- 214 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ--LCVAD-------------- 214 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE--EEEEE--------------
T ss_pred eCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE--EEEEE--------------
Confidence 334788877733 467889999654444444322111 0001223557788876443 22222
Q ss_pred CCCcccceEEEEEcCCCceEEe-ccc-CcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccc
Q 037927 180 NSRCIDIQGIVFTAKTNSWKKV-EHS-FGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSR 257 (329)
Q Consensus 180 ~~~~~~~~~~vyss~t~~W~~~-~~~-~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~ 257 (329)
.....+.+|+..++..... ... ...-+... .... ...+..+|.+|.... . ...+..+|..+.+...
T Consensus 215 ---~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~---~~~p-g~~~~~~g~~~v~~~-~----~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 215 ---RENGRIQCFKTDTKEFVREIKHASFGRNVFAI---SYIP-GFLFAVNGKPYFGDQ-E----PVQGFVMNFSSGEIID 282 (329)
T ss_dssp ---TTTTEEEEEETTTCCEEEEECCTTTTTCEEEE---EEET-TEEEEEECCCCTTCS-C----CCCEEEEETTTCCEEE
T ss_pred ---CCCCEEEEEECCCCcEEEEEeccccCCCccee---eecC-CEEEEeCCCEEeccC-C----CcEEEEEEcCCCeEEE
Confidence 1245788999886654322 110 00011111 0011 113344555554322 1 4588899988776544
Q ss_pred cCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeC
Q 037927 258 VPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEY 296 (329)
Q Consensus 258 i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~ 296 (329)
.--+..........++.. +|.|++... ...+.+|.++..
T Consensus 283 ~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 283 VFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 311111111122345544 678888888 888888988753
No 33
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=69.46 E-value=51 Score=27.85 Aligned_cols=53 Identities=17% Similarity=0.101 Sum_probs=35.1
Q ss_pred eEEEEEECCCccccccCCCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEEeee
Q 037927 243 FGITAFDLATDKFSRVPKPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 243 ~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~l~~ 295 (329)
..|..||...+....+..|..........++..+|+|++... ...+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 579999998777777777754321122234456899999887 77777777654
No 34
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=67.98 E-value=50 Score=27.20 Aligned_cols=67 Identities=10% Similarity=0.179 Sum_probs=38.8
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
|.+|+|... .+..+.|||..|++...+-..... ......+.+.+.. .+-+ ... .
T Consensus 34 S~~~~lAvg--~D~tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~~~~-~~l~-sgs------------------~ 87 (318)
T 4ggc_A 34 SSGNVLAVA--LDNSVYLWSASSGDILQLLQMEQP----GEYISSVAWIKEG-NYLA-VGT------------------S 87 (318)
T ss_dssp CTTSEEEEE--ETTEEEEEETTTCCEEEEEECCST----TCCEEEEEECTTS-SEEE-EEE------------------T
T ss_pred CCCCEEEEE--eCCEEEEEECCCCCEEEEEEecCC----CCeEEEEEECCCC-CEEE-EEE------------------C
Confidence 567766655 467899999999987653222211 1123345666653 3322 222 2
Q ss_pred cceEEEEEcCCCc
Q 037927 185 DIQGIVFTAKTNS 197 (329)
Q Consensus 185 ~~~~~vyss~t~~ 197 (329)
...+.+++.+++.
T Consensus 88 Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 88 SAEVQLWDVQQQK 100 (318)
T ss_dssp TSEEEEEETTTTE
T ss_pred CCcEEEeecCCce
Confidence 3467888888764
No 35
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.08 E-value=1e+02 Score=30.42 Aligned_cols=61 Identities=11% Similarity=0.278 Sum_probs=37.5
Q ss_pred ECceeeEEeeccccCCceEEEEEECCCcccccc-CCCCCCCCCceeEEEEECCcEEEEEcCCEEEEEEee
Q 037927 226 VNESLHWLTNNQCEFGMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVVGGRLCLLALGANVELWVMK 294 (329)
Q Consensus 226 ~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~g~L~~~~~~~~l~vW~l~ 294 (329)
.+|.|||... . ...|..+|+....-..+ .-+.... .-..|++.+++||++.. ..-.|++.+
T Consensus 568 ~~~~LYwaD~-~----~~~I~~~d~dG~~~~~v~~~~~~l~--~P~glav~~~~lYwtD~-~~~~I~~~d 629 (791)
T 3m0c_C 568 LSGRLYWVDS-K----LHSISSIDVNGGNRKTILEDEKRLA--HPFSLAVFEDKVFWTDI-INEAIFSAN 629 (791)
T ss_dssp TTTEEEEEET-T----TTEEEEEETTSCSCEEEEECTTTTS--SEEEEEEETTEEEEEET-TTTEEEEEE
T ss_pred CCCeEEEEeC-C----CCcEEEEecCCCceEEEecCCCccC--CCCEEEEeCCEEEEEEC-CCCEEEEEe
Confidence 3589999865 3 56899999986654443 2111111 23466778889998885 223445554
No 36
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=66.67 E-value=63 Score=27.85 Aligned_cols=107 Identities=12% Similarity=0.051 Sum_probs=57.6
Q ss_pred ccccEEEEEcCCceEEEEcCcccceee---CCCCCCCCCC-CCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTK---LPADPDATYD-YDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~---LP~~~~~~~~-~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.+|.|.+. .....++.+|+.||+... ++........ ..........+. . +|+...
T Consensus 52 ~~~~v~~~-~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~v~v~~---------------- 110 (376)
T 3q7m_A 52 ADNVVYAA-DRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG---G-HVYIGS---------------- 110 (376)
T ss_dssp ETTEEEEE-CTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET---T-EEEEEE----------------
T ss_pred ECCEEEEE-cCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC---C-EEEEEc----------------
Confidence 46777666 456688899999988543 3221110000 011112222232 2 232222
Q ss_pred CcccceEEEEEcCCC--ceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCcc
Q 037927 182 RCIDIQGIVFTAKTN--SWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDK 254 (329)
Q Consensus 182 ~~~~~~~~vyss~t~--~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~ 254 (329)
....+..++..++ .|+.... ... . .. ++..+|.+|.... ...|.+||.++.+
T Consensus 111 --~~g~l~a~d~~tG~~~W~~~~~------~~~-----~-~~-p~~~~~~v~v~~~------~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 111 --EKAQVYALNTSDGTVAWQTKVA------GEA-----L-SR-PVVSDGLVLIHTS------NGQLQALNEADGA 164 (376)
T ss_dssp --TTSEEEEEETTTCCEEEEEECS------SCC-----C-SC-CEEETTEEEEECT------TSEEEEEETTTCC
T ss_pred --CCCEEEEEECCCCCEEEEEeCC------Cce-----E-cC-CEEECCEEEEEcC------CCeEEEEECCCCc
Confidence 1245677887776 5766432 111 1 12 5777888887665 5799999997754
No 37
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=66.00 E-value=1e+02 Score=29.93 Aligned_cols=142 Identities=6% Similarity=0.061 Sum_probs=71.5
Q ss_pred cCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcC
Q 037927 115 DNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAK 194 (329)
Q Consensus 115 ~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~ 194 (329)
..++.+.|||..++....+-..... ......+.+.+..+.-.++... ....+.+|+..
T Consensus 28 ~~dg~I~vwd~~~~~~~~~~~l~~h----~~~V~~l~~s~~~~~~~l~s~s------------------~Dg~I~vwd~~ 85 (753)
T 3jro_A 28 SSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCS------------------YDGKVLIWKEE 85 (753)
T ss_dssp ETTTEEEEEEEETTEEEEEEEECCC----SSCEEEEEECCTTSCSEEEEEE------------------TTSCEEEEEEE
T ss_pred ECCCcEEEEecCCCCCccceeccCC----cCceEEEEecCCCCCCEEEEEe------------------CCCeEEEEECC
Confidence 4667788888774433322211111 1123456665553233333333 24568899998
Q ss_pred CCceEEecccCcccccccccccccCCCceeEE--C--ceeeEEeeccccCCceEEEEEECCCccccc-cCCCCCCCCCce
Q 037927 195 TNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--N--ESLHWLTNNQCEFGMFGITAFDLATDKFSR-VPKPDFDYAHQA 269 (329)
Q Consensus 195 t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~i~~fD~~~~~~~~-i~lP~~~~~~~~ 269 (329)
++.|..+.. ..... .... .+.+ + |.....+. . ...|..+|+.+..-.. ..+..... ..
T Consensus 86 ~~~~~~~~~----~~~h~-----~~V~-~v~~sp~~~~~~l~sgs-~----dg~I~vwdl~~~~~~~~~~~~~~~~--~v 148 (753)
T 3jro_A 86 NGRWSQIAV----HAVHS-----ASVN-SVQWAPHEYGPLLLVAS-S----DGKVSVVEFKENGTTSPIIIDAHAI--GV 148 (753)
T ss_dssp TTEEEEEEE----ECCCS-----SCEE-EEEECCGGGCSEEEEEE-T----TSEEEEEECCSSSCCCCEEEECCSS--CE
T ss_pred CCccccccc----ccCCC-----CCeE-EEEECCCCCCCEEEEEe-C----CCcEEEEEeecCCCcceeEeecCCC--ce
Confidence 888766654 22111 0011 2332 2 54444444 3 5789999988763221 12211111 11
Q ss_pred eEEEEE--------------CCcEEEEEc-CCEEEEEEeee
Q 037927 270 MGLGVV--------------GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 270 ~~l~~~--------------~g~L~~~~~-~~~l~vW~l~~ 295 (329)
..+... +|.+.++.. ...+.+|.+..
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 222222 356666666 88899998875
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=65.70 E-value=61 Score=27.38 Aligned_cols=94 Identities=6% Similarity=0.092 Sum_probs=50.4
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEEC----ceeeEEeeccccCCceEEEEEECCCcccc-ccC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVN----ESLHWLTNNQCEFGMFGITAFDLATDKFS-RVP 259 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~~i~~fD~~~~~~~-~i~ 259 (329)
...+.+|+..++.|..+.. ..... .... .+.+. |.+...+. . ...|..+|+.+.... .+.
T Consensus 78 dg~v~iwd~~~~~~~~~~~----~~~~~-----~~v~-~~~~~~~~~~~~l~~~~-~----d~~i~v~d~~~~~~~~~~~ 142 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAV----HAVHS-----ASVN-SVQWAPHEYGPLLLVAS-S----DGKVSVVEFKENGTTSPII 142 (379)
T ss_dssp TSCEEEEEEETTEEEEEEE----ECCCS-----SCEE-EEEECCGGGCSEEEEEE-T----TSEEEEEECCTTSCCCEEE
T ss_pred CCEEEEEEcCCCceeEeee----ecCCC-----cceE-EEEeCCCCCCCEEEEec-C----CCcEEEEecCCCCceeeEE
Confidence 3468899999888776654 22111 0011 23332 44444444 3 568889998876332 222
Q ss_pred CCCCCCCCceeEEEEE--------------CCcEEEEEc-CCEEEEEEeee
Q 037927 260 KPDFDYAHQAMGLGVV--------------GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~--------------~g~L~~~~~-~~~l~vW~l~~ 295 (329)
+..... ....+... ++.+.++.. ...+.+|.+..
T Consensus 143 ~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 191 (379)
T 3jrp_A 143 IDAHAI--GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 191 (379)
T ss_dssp EECCTT--CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEET
T ss_pred ecCCCC--ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecC
Confidence 211111 11223322 466666666 88899998875
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=61.27 E-value=82 Score=27.36 Aligned_cols=144 Identities=9% Similarity=0.072 Sum_probs=76.7
Q ss_pred ccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
.++.++.. .....+.+||..+++...+-.... ......+.+.+. +.+ ++.+. ..
T Consensus 102 s~~~l~~~-~~d~~v~lw~~~~~~~~~~~~~~~-----~~~v~~v~~s~~-~~~--l~~~~-----------------~d 155 (401)
T 4aez_A 102 SNLNVVAV-ALERNVYVWNADSGSVSALAETDE-----STYVASVKWSHD-GSF--LSVGL-----------------GN 155 (401)
T ss_dssp CTTSEEEE-EETTEEEEEETTTCCEEEEEECCT-----TCCEEEEEECTT-SSE--EEEEE-----------------TT
T ss_pred cCCCEEEE-ECCCeEEEeeCCCCcEeEeeecCC-----CCCEEEEEECCC-CCE--EEEEC-----------------CC
Confidence 34444444 467889999999998765443321 112345666663 333 22331 13
Q ss_pred ceEEEEEcCCCceE-EecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCC
Q 037927 186 IQGIVFTAKTNSWK-KVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFD 264 (329)
Q Consensus 186 ~~~~vyss~t~~W~-~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~ 264 (329)
..+.+|+..++.-. .... ..... ..+..+|.....+. . ...|..+|+.+..-....+....
T Consensus 156 g~i~iwd~~~~~~~~~~~~----~~~~v---------~~~~~~~~~l~~~~-~----dg~i~i~d~~~~~~~~~~~~~~~ 217 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG----HQARV---------GCLSWNRHVLSSGS-R----SGAIHHHDVRIANHQIGTLQGHS 217 (401)
T ss_dssp SCEEEEETTTCCEEEEECC----CSSCE---------EEEEEETTEEEEEE-T----TSEEEEEETTSSSCEEEEEECCS
T ss_pred CeEEEEECcCCeEEEEecC----CCCce---------EEEEECCCEEEEEc-C----CCCEEEEecccCcceeeEEcCCC
Confidence 46888988776422 2111 11111 14555676555544 3 57899999985432222222111
Q ss_pred CCCceeEEEEE-CCcEEEEEc-CCEEEEEEeee
Q 037927 265 YAHQAMGLGVV-GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 265 ~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~ 295 (329)
. ....+... +|.+.++.. ...+.||.++.
T Consensus 218 ~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 218 S--EVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp S--CEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred C--CeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 1 12233333 566666655 78889998764
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=59.82 E-value=69 Score=26.03 Aligned_cols=143 Identities=10% Similarity=0.013 Sum_probs=76.7
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
..+|.+.+.......+.++|| +++...+..+.. .....++..|+.. ++.... ..
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-----~~~~~~i~~~~~g---~l~v~~-----------------~~ 160 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK-----GSYPSFITLGSDN---ALWFTE-----------------NQ 160 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-----TCCEEEEEECTTS---CEEEEE-----------------TT
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC-----CCCCceEEEcCCC---CEEEEe-----------------CC
Confidence 446777766345678999999 777665432211 1123456667653 232222 11
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPD 262 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~ 262 (329)
...+.+|+. ++....... +... ....++.+ +|.+|+... . ...|..+|+ +.++..+.+|.
T Consensus 161 ~~~i~~~~~-~g~~~~~~~-----~~~~------~~~~~i~~~~~g~l~v~~~-~----~~~i~~~~~-~g~~~~~~~~~ 222 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKI-----PTPA------SGPVGITKGNDDALWFVEI-I----GNKIGRITT-SGEITEFKIPT 222 (299)
T ss_dssp TTEEEEECT-TCCEEEEEC-----SSTT------CCEEEEEECTTSSEEEEET-T----TTEEEEECT-TCCEEEEECSS
T ss_pred CCEEEEEcC-CCcEEEeeC-----CCCC------CcceeEEECCCCCEEEEcc-C----CceEEEECC-CCcEEEEECCC
Confidence 235666776 666554321 1111 11113444 578766543 2 468999999 76666665553
Q ss_pred CCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEe
Q 037927 263 FDYAHQAMGLGVV-GGRLCLLAL-GANVELWVM 293 (329)
Q Consensus 263 ~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l 293 (329)
... ....++.. +|.|++... ...+.++..
T Consensus 223 ~~~--~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 223 PNA--RPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTC--CEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCC--CceeEEECCCCCEEEeccCCceEEEECC
Confidence 322 22344443 678888775 556665543
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=56.40 E-value=92 Score=26.39 Aligned_cols=92 Identities=10% Similarity=-0.043 Sum_probs=50.3
Q ss_pred cceEEEEEcCCCce-EEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCcccc-ccCCCC
Q 037927 185 DIQGIVFTAKTNSW-KKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFS-RVPKPD 262 (329)
Q Consensus 185 ~~~~~vyss~t~~W-~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~-~i~lP~ 262 (329)
...+.+++..++.- +.++. ...|..+ .+.-+|.+|.... . ...|..+|+.+.+.. .++.+.
T Consensus 63 ~~~v~viD~~t~~~~~~i~~--~~~p~~i----------~~~~~g~lyv~~~-~----~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITG--FTSPRYI----------HFLSDEKAYVTQI-W----DYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp GTEEEEEETTTCCEEEEEEC--CSSEEEE----------EEEETTEEEEEEB-S----CSEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEECcccEEEEEcCC--CCCCcEE----------EEeCCCeEEEEEC-C----CCeEEEEECCCCeEEEEEEcCC
Confidence 45788899888754 33322 0112211 2335788888763 2 578999999987764 455544
Q ss_pred CCCCC-ceeEEEEECCcEEEEEc--CCEEEEEEe
Q 037927 263 FDYAH-QAMGLGVVGGRLCLLAL--GANVELWVM 293 (329)
Q Consensus 263 ~~~~~-~~~~l~~~~g~L~~~~~--~~~l~vW~l 293 (329)
..... .-..++..+++|++... ..++.++-+
T Consensus 126 ~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 126 MDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CCTTTCBCCCEEEETTEEEEEECTTCCEEEEEET
T ss_pred ccccCCCcceEEEECCEEEEEcCCCCCEEEEEEC
Confidence 11000 11123346778887764 444444433
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=56.31 E-value=98 Score=26.67 Aligned_cols=77 Identities=10% Similarity=0.047 Sum_probs=38.5
Q ss_pred CceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeCC--Cccce
Q 037927 227 NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEYG--VKCSW 302 (329)
Q Consensus 227 ~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~~--~~~~W 302 (329)
+|.+...+. . +..|..+|+.+.+.....+..... ....++.. +|++.+... +.+++||.+.... ....|
T Consensus 280 dg~~lasgs-~----D~~V~iwd~~~~~~~~~~~~gH~~--~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~~~~s~~ 352 (365)
T 4h5i_A 280 KGELAVLAS-N----DNSIALVKLKDLSMSKIFKQAHSF--AITEVTISPDSTYVASVSAANTIHIIKLPLNYANYTSMK 352 (365)
T ss_dssp TSCEEEEEE-T----TSCEEEEETTTTEEEEEETTSSSS--CEEEEEECTTSCEEEEEETTSEEEEEECCTTTTC-----
T ss_pred CCCceEEEc-C----CCEEEEEECCCCcEEEEecCcccC--CEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCcCccCcc
Confidence 566555554 3 568889999886543221211111 22344444 788777666 9999999996432 13358
Q ss_pred EEeeccceEEec
Q 037927 303 QKHYCLGISISA 314 (329)
Q Consensus 303 ~~~~~~~~~i~~ 314 (329)
+++ .+++.
T Consensus 353 ~~l----~kl~~ 360 (365)
T 4h5i_A 353 QKI----SKLEH 360 (365)
T ss_dssp ------------
T ss_pred ccc----eeeec
Confidence 877 55543
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=56.16 E-value=96 Score=26.52 Aligned_cols=138 Identities=11% Similarity=0.080 Sum_probs=69.9
Q ss_pred cEEEEEcCCceEEEEcCcccceee-CCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccce
Q 037927 109 LICLALDNYREIFIWNPSTGAYTK-LPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQ 187 (329)
Q Consensus 109 lll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (329)
.+++.......+.+||..+++... ++... . ...+.+++.. .+-+ +.. .....
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~------~--~~~~~~s~dg-~~l~-~~~-----------------~~d~~ 55 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS------N--PMGAVISPDG-TKVY-VAN-----------------AHSND 55 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS------S--EEEEEECTTS-SEEE-EEE-----------------GGGTE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC------C--cceEEECCCC-CEEE-EEC-----------------CCCCe
Confidence 444443467789999999987654 33211 1 2345666553 2222 222 12357
Q ss_pred EEEEEcCCCceEEecccCcccccccccccccCCCceeEECce-eeEEeeccccCCceEEEEEECCCcccccc-CCCCCCC
Q 037927 188 GIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNES-LHWLTNNQCEFGMFGITAFDLATDKFSRV-PKPDFDY 265 (329)
Q Consensus 188 ~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~lP~~~~ 265 (329)
+.+|+..++.-...-. .+... ... .+.-+|. +|..+. . ...|..+|+.+.+.... ....
T Consensus 56 i~v~d~~~~~~~~~~~----~~~~v-----~~~--~~spdg~~l~~~~~-~----~~~v~v~d~~~~~~~~~~~~~~--- 116 (391)
T 1l0q_A 56 VSIIDTATNNVIATVP----AGSSP-----QGV--AVSPDGKQVYVTNM-A----SSTLSVIDTTSNTVAGTVKTGK--- 116 (391)
T ss_dssp EEEEETTTTEEEEEEE----CSSSE-----EEE--EECTTSSEEEEEET-T----TTEEEEEETTTTEEEEEEECSS---
T ss_pred EEEEECCCCeEEEEEE----CCCCc-----cce--EECCCCCEEEEEEC-C----CCEEEEEECCCCeEEEEEeCCC---
Confidence 8889988775322211 11111 000 1222455 444333 2 46899999988765332 2211
Q ss_pred CCceeEEEEE-CCc-EEEEEc-CCEEEEEEee
Q 037927 266 AHQAMGLGVV-GGR-LCLLAL-GANVELWVMK 294 (329)
Q Consensus 266 ~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~ 294 (329)
....+... +|+ |++... ...+.+|.++
T Consensus 117 --~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 117 --SPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp --SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred --CcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 11233333 455 445555 7778888764
No 44
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=55.43 E-value=25 Score=25.71 Aligned_cols=40 Identities=23% Similarity=0.409 Sum_probs=27.4
Q ss_pred ceEEEEcCccc-ceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEE
Q 037927 118 REIFIWNPSTG-AYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYF 165 (329)
Q Consensus 118 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 165 (329)
-.+++.||.|+ .|...-... ...-+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~--------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA--------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC--------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc--------eEEEEEEcCCCCEEEEEEcc
Confidence 46788999996 885533221 23446678888889998754
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=54.23 E-value=1e+02 Score=26.20 Aligned_cols=146 Identities=8% Similarity=0.077 Sum_probs=65.3
Q ss_pred cccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccc
Q 037927 107 HGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDI 186 (329)
Q Consensus 107 ~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 186 (329)
+|-+++....+..+.|||..++.+..+-..... ......+.+.+.. .+ ++... ...
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~s~~~-~~-l~s~s------------------~d~ 77 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDH----DKIVTCVDWAPKS-NR-IVTCS------------------QDR 77 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCC----SSCEEEEEECTTT-CC-EEEEE------------------TTS
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecC----CceEEEEEEeCCC-CE-EEEEe------------------CCC
Confidence 344443313566788899888754443333221 1224456666653 22 22222 134
Q ss_pred eEEEEEcCCCc-eEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCcc-c---cccC
Q 037927 187 QGIVFTAKTNS-WKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDK-F---SRVP 259 (329)
Q Consensus 187 ~~~vyss~t~~-W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~-~---~~i~ 259 (329)
.+.+|+..++. |..... +.... .... .+.+ +|.....+. . ...|..+|+.+.+ + ..+.
T Consensus 78 ~v~vwd~~~~~~~~~~~~----~~~~~-----~~v~-~~~~~~~~~~l~~~~-~----d~~i~iwd~~~~~~~~~~~~~~ 142 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLV----LLRLN-----RAAT-FVRWSPNEDKFAVGS-G----ARVISVCYFEQENDWWVSKHLK 142 (377)
T ss_dssp SEEEC------CCCCEEE----CCCCS-----SCEE-EEECCTTSSCCEEEE-S----SSCEEECCC-----CCCCEEEC
T ss_pred eEEEEEcCCCCceeeeeE----ecccC-----CceE-EEEECCCCCEEEEEe-c----CCeEEEEEECCcccceeeeEee
Confidence 67888887765 544332 11111 0000 2222 455444443 2 4578888888765 2 2222
Q ss_pred CCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEee
Q 037927 260 KPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~ 294 (329)
-|... ....+... +|++.+... ...+.+|.++
T Consensus 143 ~~h~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 143 RPLRS---TILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SSCCS---CEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred cccCC---CeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 22111 22334433 566666665 8889999985
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=53.15 E-value=1.1e+02 Score=26.18 Aligned_cols=151 Identities=8% Similarity=-0.004 Sum_probs=76.9
Q ss_pred cccc-cEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc
Q 037927 105 SCHG-LICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC 183 (329)
Q Consensus 105 s~~G-lll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 183 (329)
+.+| -+++....+..+.|||..+++....-..... ......+.+.+..+.+ ++...
T Consensus 82 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~-l~s~~------------------ 138 (383)
T 3ei3_B 82 HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGP----GDAITGMKFNQFNTNQ-LFVSS------------------ 138 (383)
T ss_dssp CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCST----TCBEEEEEEETTEEEE-EEEEE------------------
T ss_pred CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCc----CCceeEEEeCCCCCCE-EEEEe------------------
Confidence 4455 3333325677899999998876654322111 1224456666532222 22222
Q ss_pred ccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 184 IDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 184 ~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
....+.+|+..++..+.... ..... . .-..-...-+|.....+. . ...|..+|+..+....+.....
T Consensus 139 ~d~~i~iwd~~~~~~~~~~~----~~~~~---~-~v~~~~~~~~~~~l~~~~-~----d~~i~i~d~~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 139 IRGATTLRDFSGSVIQVFAK----TDSWD---Y-WYCCVDVSVSRQMLATGD-S----TGRLLLLGLDGHEIFKEKLHKA 205 (383)
T ss_dssp TTTEEEEEETTSCEEEEEEC----CCCSS---C-CEEEEEEETTTTEEEEEE-T----TSEEEEEETTSCEEEEEECSSS
T ss_pred CCCEEEEEECCCCceEEEec----cCCCC---C-CeEEEEECCCCCEEEEEC-C----CCCEEEEECCCCEEEEeccCCC
Confidence 24567888888766555443 11000 0 000002223455444444 3 5789999986554443332111
Q ss_pred CCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEeee
Q 037927 264 DYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMKE 295 (329)
Q Consensus 264 ~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~~ 295 (329)
....+... +|+ +.+... ...+.||.+..
T Consensus 206 ----~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 206 ----KVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ----CEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ----cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 12233333 455 555555 88999998875
No 47
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.88 E-value=1.3e+02 Score=29.11 Aligned_cols=59 Identities=12% Similarity=0.295 Sum_probs=34.4
Q ss_pred eeEE---CceeeEEeeccccCCceEEEEEECCCcccccc-CCCCCCCCCceeEEEEECCcEEEEEc-CCEE
Q 037927 223 GTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVVGGRLCLLAL-GANV 288 (329)
Q Consensus 223 ~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l 288 (329)
++.+ +|.|||... . ...|.++|+....-..+ ..+.... .-..|++.++.|+++.. ...|
T Consensus 544 Glavd~~~~~LY~aD~-~----~~~I~~~d~dG~~~~~~~~~~~~~~--~P~glavd~~~lywtd~~~~~V 607 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDS-K----LHSISSIDVNGGNRKTILEDEKRLA--HPFSLAVFEDKVFWTDIINEAI 607 (699)
T ss_dssp CEEECTTTCCEEEEET-T----TTEEEEECSSSSCCEEECCCSSSCS--SCCCCEEETTEEEEECSTTTCE
T ss_pred EEEEeccCCEEEEEec-C----CCeEEEEccCCCceEEEEecCCcCC--CceEeEEECCEEEEEeCCCCeE
Confidence 5555 488999776 3 56899999976444333 2221111 11244556777887776 4443
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=51.94 E-value=1.1e+02 Score=25.90 Aligned_cols=151 Identities=13% Similarity=0.026 Sum_probs=76.6
Q ss_pred ccccEEEEEc-CCceEEEEcCccccee-eCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc
Q 037927 106 CHGLICLALD-NYREIFIWNPSTGAYT-KLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC 183 (329)
Q Consensus 106 ~~Glll~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 183 (329)
.+|.|.+... ....+.++|+.|++.. .++..... ..+.+|+.. . ++..... . +.......
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p--------~~i~~~~dG-~--l~v~~~~------~-~~~~~~~~ 200 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP--------TSLVMDKYN-K--MWTITDG------G-YEGSPYGY 200 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB--------CCCEECTTS-E--EEEEBCC------B-CTTCSSCB
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc--------cceEEcCCC-C--EEEEECC------C-ccCCcccc
Confidence 5677766622 3678999999998864 34432211 134556543 2 3222210 0 00000001
Q ss_pred ccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEEC--ceeeEEeeccccCCceEEEEEECCCccccccC-C
Q 037927 184 IDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVN--ESLHWLTNNQCEFGMFGITAFDLATDKFSRVP-K 260 (329)
Q Consensus 184 ~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~--G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~-l 260 (329)
....+.+++..+++-...-. .+... .+..+.++ |...|++. . .|..+|+.+.+..... +
T Consensus 201 ~~~~v~~id~~t~~v~~~~~----~~~g~-------~p~~la~~~d~~~lyv~~------~-~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFK----FKLGD-------WPSEVQLNGTRDTLYWIN------N-DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEE----CCTTC-------CCEEEEECTTSCEEEEES------S-SEEEEETTCSSCCSSCSB
T ss_pred CCceEEEEECCCCeEEEEEe----cCCCC-------CceeEEEecCCCEEEEEc------c-EEEEEECCCCceeeeeee
Confidence 13578888988876432211 22211 11244443 56555555 3 6789999988764322 2
Q ss_pred CCCCCCCceeEEEEE--CCcEEEEE----c-CCEEEEEEee
Q 037927 261 PDFDYAHQAMGLGVV--GGRLCLLA----L-GANVELWVMK 294 (329)
Q Consensus 261 P~~~~~~~~~~l~~~--~g~L~~~~----~-~~~l~vW~l~ 294 (329)
+.... ....+++. +|.|++.. . ...+.+|..+
T Consensus 263 ~~~~~--~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 263 EFRDT--KYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCCSS--CEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred cCCCC--ceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 22111 22345553 68899988 3 4455555543
No 49
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=51.22 E-value=1.2e+02 Score=26.16 Aligned_cols=144 Identities=11% Similarity=0.015 Sum_probs=75.3
Q ss_pred ccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc
Q 037927 104 GSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC 183 (329)
Q Consensus 104 ~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 183 (329)
+..+|.|.+......++..+++.++....+...... ...++++|+..+. +++.. .
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~------~p~glavd~~~g~--ly~~d-----------------~ 135 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE------SPGGLAVDWVHDK--LYWTD-----------------S 135 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------CCCEEEEETTTTE--EEEEE-----------------T
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCCC------CccEEEEecCCCe--EEEEc-----------------C
Confidence 346777777634567888888887765544322211 1236788876443 32232 1
Q ss_pred ccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCccccccCC
Q 037927 184 IDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPK 260 (329)
Q Consensus 184 ~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~l 260 (329)
....+++++.....-+.+.. ... ..+.++.+ +|.+||... .. ...|..+|+....-..+-
T Consensus 136 ~~~~I~~~~~dG~~~~~l~~------~~l------~~P~~iavdp~~g~ly~td~-~~---~~~I~r~~~dG~~~~~~~- 198 (349)
T 3v64_C 136 GTSRIEVANLDGAHRKVLLW------QSL------EKPRAIALHPMEGTIYWTDW-GN---TPRIEASSMDGSGRRIIA- 198 (349)
T ss_dssp TTTEEEEEETTSCSCEEEEC------TTC------SCEEEEEEETTTTEEEEEEC-SS---SCEEEEEETTSCSCEESC-
T ss_pred CCCeEEEEcCCCCceEEEEe------CCC------CCcceEEEecCcCeEEEecc-CC---CCEEEEEeCCCCCcEEEE-
Confidence 23467777776543222221 111 11123433 589999876 32 268999998865443331
Q ss_pred CCCCCCCceeEEEEE--CCcEEEEEc-CCEEEEE
Q 037927 261 PDFDYAHQAMGLGVV--GGRLCLLAL-GANVELW 291 (329)
Q Consensus 261 P~~~~~~~~~~l~~~--~g~L~~~~~-~~~l~vW 291 (329)
..... .--.|+.. +|+||++.. ...+...
T Consensus 199 ~~~~~--~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 199 DTHLF--WPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp CSSCS--CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ECCCC--CcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 11111 11235543 677777776 4444333
No 50
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=50.15 E-value=74 Score=27.35 Aligned_cols=56 Identities=18% Similarity=0.102 Sum_probs=33.6
Q ss_pred eeEECceeeEEeeccccCCceEEEEEECCCcccc-ccCCCCCC------CCCceeEEEEECCcEEEEEc
Q 037927 223 GTLVNESLHWLTNNQCEFGMFGITAFDLATDKFS-RVPKPDFD------YAHQAMGLGVVGGRLCLLAL 284 (329)
Q Consensus 223 ~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~-~i~lP~~~------~~~~~~~l~~~~g~L~~~~~ 284 (329)
++..+|.+|.... ...|.+||.++.+.. ..+++... ........+..+|.+++...
T Consensus 49 p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 111 (376)
T 3q7m_A 49 PALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE 111 (376)
T ss_dssp CEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET
T ss_pred cEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC
Confidence 8889999998766 569999999765432 23443221 11122344455666666554
No 51
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=49.83 E-value=33 Score=24.64 Aligned_cols=42 Identities=10% Similarity=0.252 Sum_probs=28.8
Q ss_pred ceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEE
Q 037927 118 REIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYF 165 (329)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 165 (329)
-.+++.+|.|+.| +|..... ......+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W--~p~~~~~----g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKW--VPAGGST----GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEE--EEGGGCC----SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCce--EECCCCC----CceEEEEEEECCCCEEEEEEEE
Confidence 3577899999966 4433211 2334567788888899998876
No 52
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=49.80 E-value=1.1e+02 Score=25.34 Aligned_cols=146 Identities=13% Similarity=0.129 Sum_probs=73.9
Q ss_pred cccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccc
Q 037927 107 HGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDI 186 (329)
Q Consensus 107 ~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 186 (329)
.+.+.+.......+.++|+.|++....-.... . .. .+.+++..+ + ++... . ...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~-~~-~~~~s~dg~-~-l~~~~---------------~--~~~ 62 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY-----D-FV-DTAITSDCS-N-VVVTS---------------D--FCQ 62 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-----C-EE-EEEECSSSC-E-EEEEE---------------S--TTC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC-----C-cc-eEEEcCCCC-E-EEEEe---------------C--CCC
Confidence 44444443456789999999998754322221 1 12 567776643 2 33333 1 123
Q ss_pred eEEEEEcCCCce--EEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCC
Q 037927 187 QGIVFTAKTNSW--KKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFD 264 (329)
Q Consensus 187 ~~~vyss~t~~W--~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~ 264 (329)
.+.+|+..++.- +.+.. ...|.. . -.+.-+|...+... .. .+...|..+|+.+.+.... ++...
T Consensus 63 ~i~~~d~~~~~~~~~~~~~--~~~~~~--------~-~~~s~dg~~l~~~~-~~-~~~~~i~v~d~~~~~~~~~-~~~~~ 128 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQE--GQSSMA--------D-VDITPDDQFAVTVT-GL-NHPFNMQSYSFLKNKFIST-IPIPY 128 (331)
T ss_dssp EEEEEECSSSSCEEEEEEE--CSSCCC--------C-EEECTTSSEEEECC-CS-SSSCEEEEEETTTTEEEEE-EECCT
T ss_pred eEEEEECCCCceeEEeccc--CCCCcc--------c-eEECCCCCEEEEec-CC-CCcccEEEEECCCCCeEEE-EECCC
Confidence 778888887753 22221 001111 0 02223455333333 21 1122899999987765322 22211
Q ss_pred CCCceeEEEEE-CCc-EEEEEc-CCE-EEEEEeee
Q 037927 265 YAHQAMGLGVV-GGR-LCLLAL-GAN-VELWVMKE 295 (329)
Q Consensus 265 ~~~~~~~l~~~-~g~-L~~~~~-~~~-l~vW~l~~ 295 (329)
....++.. +|+ |++... ... +.+|.++.
T Consensus 129 ---~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 129 ---DAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ---TEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred ---CccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 11234443 565 666655 455 99998874
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=49.79 E-value=98 Score=24.75 Aligned_cols=145 Identities=13% Similarity=0.053 Sum_probs=76.0
Q ss_pred ccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
.+|.+.+.......+.++++-+............ ...++.+|+... ++... ...
T Consensus 117 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------~p~~i~~~~~g~---l~v~~-----------------~~~ 170 (270)
T 1rwi_B 117 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN------DPDGVAVDNSGN---VYVTD-----------------TDN 170 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC------SCCCEEECTTCC---EEEEE-----------------GGG
T ss_pred CCCCEEEEECCCCEEEEEECCCceeEeeccccCC------CceeEEEeCCCC---EEEEE-----------------CCC
Confidence 4666665533456777887766654443322211 122466676432 33222 123
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
..+.+|+..++.-..... ... ....++.+ +|.+|+... . ...|..||+.+.....+... .
T Consensus 171 ~~i~~~~~~~~~~~~~~~----~~~--------~~p~~i~~d~~g~l~v~~~-~----~~~v~~~~~~~~~~~~~~~~-~ 232 (270)
T 1rwi_B 171 NRVVKLEAESNNQVVLPF----TDI--------TAPWGIAVDEAGTVYVTEH-N----TNQVVKLLAGSTTSTVLPFT-G 232 (270)
T ss_dssp TEEEEECTTTCCEEECCC----SSC--------CSEEEEEECTTCCEEEEET-T----TSCEEEECTTCSCCEECCCC-S
T ss_pred CEEEEEecCCCceEeecc----cCC--------CCceEEEECCCCCEEEEEC-C----CCcEEEEcCCCCcceeeccC-C
Confidence 466777776654222211 000 11114444 576776554 2 45789999987654332221 1
Q ss_pred CCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeC
Q 037927 264 DYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEY 296 (329)
Q Consensus 264 ~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~ 296 (329)
.. ....++.. +|.|++... ...+.++.+++.
T Consensus 233 ~~--~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 233 LN--TPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CS--CEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CC--CceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 11 22344443 688988888 888888888764
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=48.11 E-value=65 Score=27.18 Aligned_cols=65 Identities=9% Similarity=0.077 Sum_probs=39.7
Q ss_pred ECceeeEEeeccccCCceEEEEEECCCccccccCC-CCCCCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEeee
Q 037927 226 VNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPK-PDFDYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMKE 295 (329)
Q Consensus 226 ~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~l-P~~~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~~ 295 (329)
-+|.+|.... ... ...|..||+.+.+...+.. +.... ....++.. +|+ |++... ...+.+|.++.
T Consensus 49 pdg~l~~~~~-~~~--~~~v~~~~~~~g~~~~~~~~~~~~~--~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 49 AKDCLYSVDK-EDD--EGGIAAWQIDGQTAHKLNTVVAPGT--PPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp TTCEEEEEEE-ETT--EEEEEEEEEETTEEEEEEEEEEESC--CCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCeEEEEEe-cCC--CceEEEEEecCCcEEEeeeeecCCC--CCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 3788777655 211 4689999998777655522 22211 12345544 566 555554 78899999975
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=46.42 E-value=1.5e+02 Score=26.06 Aligned_cols=59 Identities=10% Similarity=0.272 Sum_probs=36.8
Q ss_pred CceeeEEeeccccCCceEEEEEECCCcccccc-CCCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEEee
Q 037927 227 NESLHWLTNNQCEFGMFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 227 ~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~l~ 294 (329)
+|.|||... . ...|..+|+....-..+ ..+.... .-..+++.++.|++... ... |++.+
T Consensus 257 ~~~lY~aD~-~----~~~I~~~d~dG~~~~~~~~~~~~l~--~P~gl~v~~~~lywtd~~~~~--V~~~~ 317 (400)
T 3p5b_L 257 SGRLYWVDS-K----LHSISSIDVNGGNRKTILEDEKRLA--HPFSLAVFEDKVFWTDIINEA--IFSAN 317 (400)
T ss_dssp TTEEEEEET-T----TTEEEEEETTSCCCEEEEECSSTTS--SEEEEEEETTEEEEEESSSCS--EEEEE
T ss_pred CCEEEEEEC-C----CCEEEEEeCCCCccEEEEeCCCCCC--CCEEEEEeCCEEEEecCCCCe--EEEEE
Confidence 589999865 3 56899999986554443 2222221 22456778888998886 333 44444
No 56
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=46.21 E-value=1.5e+02 Score=25.91 Aligned_cols=140 Identities=13% Similarity=0.066 Sum_probs=71.7
Q ss_pred cccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccc
Q 037927 107 HGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDI 186 (329)
Q Consensus 107 ~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 186 (329)
.+.|++. ....+...++.+++...+-.. .....++.+|+..+. |++.. ....
T Consensus 87 ~~~l~~~--~~~~I~~i~~~~~~~~~~~~~-------~~~~~gl~~d~~~~~--ly~~D-----------------~~~~ 138 (386)
T 3v65_B 87 EPVLLFA--NRIDIRQVLPHRSEYTLLLNN-------LENAIALDFHHRREL--VFWSD-----------------VTLD 138 (386)
T ss_dssp CCEEEEE--CBSCEEEECTTSCCCEEEECS-------CSCEEEEEEETTTTE--EEEEE-----------------TTTT
T ss_pred cceeEee--cCccceeeccCCCcEEEEecC-------CCccEEEEEecCCCe--EEEEe-----------------CCCC
Confidence 5666665 445677777776665443322 122557888876543 33332 1234
Q ss_pred eEEEEEcCCCceEEecccCcccccccccccccCCCceeE---ECceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 187 QGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTL---VNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 187 ~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
.+..++..+...+.+.. .. . ..+.++. .+|.+||... . ...|..+|+....-..+ +...
T Consensus 139 ~I~r~~~~g~~~~~~~~----~~--~------~~p~glavd~~~g~lY~~d~-~----~~~I~~~~~dg~~~~~l-~~~~ 200 (386)
T 3v65_B 139 RILRANLNGSNVEEVVS----TG--L------ESPGGLAVDWVHDKLYWTDS-G----TSRIEVANLDGAHRKVL-LWQS 200 (386)
T ss_dssp EEEEEETTSCCEEEEEC----SS--C------SCCCCEEEETTTTEEEEEET-T----TTEEEECBTTSCSCEEE-ECSS
T ss_pred cEEEEecCCCCcEEEEe----CC--C------CCccEEEEEeCCCeEEEEcC-C----CCeEEEEeCCCCceEEe-ecCC
Confidence 56666766655444322 11 1 0111333 3689999766 3 45888888876543332 1111
Q ss_pred CCCCceeEEEEE--CCcEEEEEcCCEEEEEEee
Q 037927 264 DYAHQAMGLGVV--GGRLCLLALGANVELWVMK 294 (329)
Q Consensus 264 ~~~~~~~~l~~~--~g~L~~~~~~~~l~vW~l~ 294 (329)
.. .-..+++. +|.|++......-.|++.+
T Consensus 201 l~--~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 201 LE--KPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp CS--CEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CC--CCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 11 12244444 5677777652223344444
No 57
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=46.13 E-value=1.1e+02 Score=24.38 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=75.6
Q ss_pred ccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
.+|.+.+. .....+.++|+.++....++.... ....++.+|+... ++... ...
T Consensus 76 ~~g~l~v~-~~~~~i~~~d~~~~~~~~~~~~~~------~~p~~i~~~~~g~---l~v~~-----------------~~~ 128 (270)
T 1rwi_B 76 GAGTVYVT-DFNNRVVTLAAGSNNQTVLPFDGL------NYPEGLAVDTQGA---VYVAD-----------------RGN 128 (270)
T ss_dssp TTCCEEEE-ETTTEEEEECTTCSCCEECCCCSC------SSEEEEEECTTCC---EEEEE-----------------GGG
T ss_pred CCCCEEEE-cCCCEEEEEeCCCceEeeeecCCc------CCCcceEECCCCC---EEEEE-----------------CCC
Confidence 35666665 336789999999887766654321 2244677777532 32222 113
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
..+.+|+.++........ .. . ....++.+ +|.+|+... . ...|..||..+...........
T Consensus 129 ~~i~~~~~~~~~~~~~~~----~~--~------~~p~~i~~~~~g~l~v~~~-~----~~~i~~~~~~~~~~~~~~~~~~ 191 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLPF----TG--L------NDPDGVAVDNSGNVYVTDT-D----NNRVVKLEAESNNQVVLPFTDI 191 (270)
T ss_dssp TEEEEECTTCCSCEECCC----CS--C------CSCCCEEECTTCCEEEEEG-G----GTEEEEECTTTCCEEECCCSSC
T ss_pred CEEEEEECCCceeEeecc----cc--C------CCceeEEEeCCCCEEEEEC-C----CCEEEEEecCCCceEeecccCC
Confidence 355666554443332211 00 0 01113433 588776554 2 4689999998765443322111
Q ss_pred CCCCceeEEEEE-CCcEEEEEc-CCEEEEEEee
Q 037927 264 DYAHQAMGLGVV-GGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 264 ~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~ 294 (329)
. ....++.. +|.|++... ...+.+|..+
T Consensus 192 --~-~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 192 --T-APWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp --C-SEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred --C-CceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 1 22344443 578888887 6666666543
No 58
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=45.30 E-value=1.4e+02 Score=25.41 Aligned_cols=52 Identities=10% Similarity=-0.038 Sum_probs=30.4
Q ss_pred ceEEEEEECCCccccccCCCCCCCCCceeEEEEE--CCcEEEEEc-CCEEEEEEeeeCC
Q 037927 242 MFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV--GGRLCLLAL-GANVELWVMKEYG 297 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~--~g~L~~~~~-~~~l~vW~l~~~~ 297 (329)
+..|..+|+.+.+..... . . ......++.. +|++.+... +..+.+|.+...+
T Consensus 291 D~~i~iwd~~~~~~~~~~-~-H--~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 291 DCTVAVLDADFSEVFRDL-S-H--RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp TSCEEEECTTSCEEEEEC-C-C--SSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCEEEEEECCCCcEeEEC-C-C--CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 457888898876543321 1 1 1123344443 677766665 8999999997543
No 59
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=44.32 E-value=39 Score=26.31 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=26.9
Q ss_pred ceEEEEcCccc-ceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEE
Q 037927 118 REIFIWNPSTG-AYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYF 165 (329)
Q Consensus 118 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 165 (329)
-.++++||.|+ .|...-... . ...+-+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~------~--~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA------V--TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC------E--EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC------e--EEEEEEcCCCCEEEEEEcc
Confidence 36788999997 785533321 1 3344578888889998864
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=41.93 E-value=1.7e+02 Score=25.29 Aligned_cols=145 Identities=12% Similarity=0.060 Sum_probs=73.6
Q ss_pred cccccEEEEEcCCceEEEEcCccccee-eCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYT-KLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC 183 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 183 (329)
+.+|.+++.......+.+||+.+++.. .++... .....+.+++..+ +-+ ... .
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~l~-~~~---------------~-- 231 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG-------KWSKILLYDPIRD-LVY-CSN---------------W-- 231 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS-------SSEEEEEEETTTT-EEE-EEE---------------T--
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC-------CCeeEEEEcCCCC-EEE-EEe---------------c--
Confidence 456666665345678999999887654 343211 1233566676533 222 222 1
Q ss_pred ccceEEEEEcCCCceEEecccCcccccccccccccCCCceeE--ECceeeEEeeccccC----CceEEEEEECCCccccc
Q 037927 184 IDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTL--VNESLHWLTNNQCEF----GMFGITAFDLATDKFSR 257 (329)
Q Consensus 184 ~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~----~~~~i~~fD~~~~~~~~ 257 (329)
....+.+|+.+++.....-. ..... ..+. -+|...+.+. .... ....|..+|+.+.+...
T Consensus 232 ~~~~i~~~d~~~~~~~~~~~----~~~~~---------~~~~~~~~g~~l~~~~-~~~~~~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 232 ISEDISVIDRKTKLEIRKTD----KIGLP---------RGLLLSKDGKELYIAQ-FSASNQESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TTTEEEEEETTTTEEEEECC----CCSEE---------EEEEECTTSSEEEEEE-EESCTTCSCCEEEEEEETTTTEEEE
T ss_pred CCCcEEEEECCCCcEEEEec----CCCCc---------eEEEEcCCCCEEEEEE-CCCCccccCCCeEEEEECCCCcEEe
Confidence 13468889988775432211 11111 0222 2565444444 2111 14689999998765433
Q ss_pred c-CCCCCCCCCceeEEEEE-CC-cEEEEEc-CCEEEEEEee
Q 037927 258 V-PKPDFDYAHQAMGLGVV-GG-RLCLLAL-GANVELWVMK 294 (329)
Q Consensus 258 i-~lP~~~~~~~~~~l~~~-~g-~L~~~~~-~~~l~vW~l~ 294 (329)
. ..+.. ...+... +| .|++... ...+.+|.++
T Consensus 298 ~~~~~~~-----~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 298 TIGPPGN-----KRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp EEEEEEC-----EEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred eccCCCC-----cceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 2 11111 1123322 45 3555555 7788888775
No 61
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=41.28 E-value=1e+02 Score=28.42 Aligned_cols=146 Identities=12% Similarity=0.138 Sum_probs=74.8
Q ss_pred ccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccce
Q 037927 108 GLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQ 187 (329)
Q Consensus 108 Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (329)
++++.. .......+||..|++...+...+. ..+.++|. +.+-+.... .......
T Consensus 123 ~~~~~s-~~~~~~~l~d~~~g~~~~l~~~~~---------~~~~~spD-G~~la~~~~---------------~~~~~~~ 176 (582)
T 3o4h_A 123 AVVFTG-ATEDRVALYALDGGGLRELARLPG---------FGFVSDIR-GDLIAGLGF---------------FGGGRVS 176 (582)
T ss_dssp CEEEEE-ECSSCEEEEEEETTEEEEEEEESS---------CEEEEEEE-TTEEEEEEE---------------EETTEEE
T ss_pred eEEEEe-cCCCCceEEEccCCcEEEeecCCC---------ceEEECCC-CCEEEEEEE---------------cCCCCeE
Confidence 345554 455666799999998777653322 13445554 333332222 1112245
Q ss_pred EEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCC
Q 037927 188 GIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAH 267 (329)
Q Consensus 188 ~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~ 267 (329)
+.+++..++.++.+.. -+... ......=||...+... .. +...|..+|+.+.+...+.-.......
T Consensus 177 i~~~d~~~g~~~~l~~----~~~~~-------~~~~~SpDG~~l~~~~-~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~ 242 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDS----GEGSF-------SSASISPGMKVTAGLE-TA--REARLVTVDPRDGSVEDLELPSKDFSS 242 (582)
T ss_dssp EEEEETTTCCCEEECC----SSCEE-------EEEEECTTSCEEEEEE-CS--SCEEEEEECTTTCCEEECCCSCSHHHH
T ss_pred EEEEcCCCCCceEeec----CCCcc-------ccceECCCCCEEEEcc-CC--CeeEEEEEcCCCCcEEEccCCCcChhh
Confidence 7888888888887754 22111 0102223666544333 21 135899999998776622211110000
Q ss_pred ---cee-EEEEE-CCcEEEEEc-CCEEEEEEe
Q 037927 268 ---QAM-GLGVV-GGRLCLLAL-GANVELWVM 293 (329)
Q Consensus 268 ---~~~-~l~~~-~g~L~~~~~-~~~l~vW~l 293 (329)
... ..... +|++++... ..++.||.+
T Consensus 243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp HCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 000 11122 667766666 778888887
No 62
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=41.19 E-value=1.4e+02 Score=24.08 Aligned_cols=146 Identities=12% Similarity=0.002 Sum_probs=71.9
Q ss_pred EccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCC
Q 037927 103 IGSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSR 182 (329)
Q Consensus 103 ~~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (329)
++..+|.|.+.......+.++++.++....+-... .....++++|+..+. ++...
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~p~~ia~d~~~~~--lyv~d----------------- 97 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRT--IFWTD----------------- 97 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTE--EEEEE-----------------
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC------CCCccEEEEEecCCe--EEEEE-----------------
Confidence 34456777766345678889998876544332111 122446778876432 22222
Q ss_pred cccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCccccccC
Q 037927 183 CIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRVP 259 (329)
Q Consensus 183 ~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~ 259 (329)
.....+.+++.....-+.+.. ... ..+.++.+ +|.+||... ... ...|..+++.......+.
T Consensus 98 ~~~~~I~~~~~~g~~~~~~~~------~~~------~~P~~i~vd~~~g~lyv~~~-~~~--~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 98 SQLDRIEVAKMDGTQRRVLFD------TGL------VNPRGIVTDPVRGNLYWTDW-NRD--NPKIETSHMDGTNRRILA 162 (267)
T ss_dssp TTTTEEEEEETTSCSCEEEEC------SSC------SSEEEEEEETTTTEEEEEEC-CSS--SCEEEEEETTSCCCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEE------CCC------CCccEEEEeeCCCEEEEEEC-CCC--CcEEEEEecCCCCcEEEE
Confidence 123466777775443222211 111 11124444 588999765 311 257888888765433321
Q ss_pred CCCCCCCCceeEEEEE--CCcEEEEEc-CCEEEEE
Q 037927 260 KPDFDYAHQAMGLGVV--GGRLCLLAL-GANVELW 291 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~--~g~L~~~~~-~~~l~vW 291 (329)
. .... .-..++.. +++||+... ...+.+.
T Consensus 163 ~-~~~~--~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 163 Q-DNLG--LPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp C-TTCS--CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred E-CCCC--CCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 1 1111 11234443 356777665 4444333
No 63
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=40.37 E-value=1.6e+02 Score=24.61 Aligned_cols=54 Identities=6% Similarity=0.065 Sum_probs=27.0
Q ss_pred ceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE---CCcEEEEEc-CCEEEEEEeee
Q 037927 242 MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV---GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~---~g~L~~~~~-~~~l~vW~l~~ 295 (329)
+..|..+|..+.+|..+ .............+... +|++.+... +..++||.++.
T Consensus 270 dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 270 DGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 56777888877665433 11111111011223222 466655555 89999998864
No 64
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=39.98 E-value=1.9e+02 Score=25.34 Aligned_cols=141 Identities=17% Similarity=0.116 Sum_probs=73.1
Q ss_pred CceEEEE--cCcccceeeCCCC--C--CCCCCCCceeEEEEE--eCCCCCEEEEEEEEeecccccccccCCCCCcccceE
Q 037927 117 YREIFIW--NPSTGAYTKLPAD--P--DATYDYDIVKYGFGY--DSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQG 188 (329)
Q Consensus 117 ~~~~~V~--NP~T~~~~~LP~~--~--~~~~~~~~~~~~~~~--d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (329)
..++.++ ||.++++..+... + .. ....+++.+ ++.++.+.++... .......+
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~----~~~pyGlcly~~~~~g~~yafV~~---------------k~G~~~q~ 158 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATA----INEVYGFTLYHSQKTGKYYAMVTG---------------KEGEFEQY 158 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECC----CSSCCCEEEEECTTTCCEEEEEEC---------------SSSEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCC----CCCeeEEEEEecCCCCcEEEEEEC---------------CCCeEEEE
Confidence 4667777 9999998888432 1 11 122334555 7777776665554 22333344
Q ss_pred EEEEcCCCceE--EecccCcccccccccccccCCCceeEEC---ceeeEEeeccccCCceEEEEEECCCcc---cccc-C
Q 037927 189 IVFTAKTNSWK--KVEHSFGSIHCCCEARNLQGRPMGTLVN---ESLHWLTNNQCEFGMFGITAFDLATDK---FSRV-P 259 (329)
Q Consensus 189 ~vyss~t~~W~--~~~~~~~~~p~~~~~~~~~~~~~~v~~~---G~lywl~~~~~~~~~~~i~~fD~~~~~---~~~i-~ 259 (329)
++.+.+.+... .+.. ++. .....+..++ |.+|.--. ...|..||.+.+. -..+ .
T Consensus 159 ~l~~~~~g~~~~~lVR~----f~l-------gsq~EgcvvDd~~g~Lyv~eE------d~GIw~~da~p~~~~~~~~v~~ 221 (355)
T 3amr_A 159 ELKADKNGYISGKKVRA----FKM-------NSQTEGMAADDEYGRLYIAEE------DEAIWKFSAEPDGGSNGTVIDR 221 (355)
T ss_dssp EEEECTTSCEEEEEEEE----EEC-------SSCEEEEEEETTTTEEEEEET------TTEEEEEECSTTSCSCCEEEEE
T ss_pred EEEeCCCCcccceEEEE----ecC-------CCCcceEEEcCCCCeEEEecc------cceEEEEeCCcCCCCCceEEEE
Confidence 44444555442 2222 221 2222355554 78887555 4569999955332 2223 2
Q ss_pred CCCC-CCCCceeEEEEE---C--CcEEEEEc-CCEEEEEEee
Q 037927 260 KPDF-DYAHQAMGLGVV---G--GRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 260 lP~~-~~~~~~~~l~~~---~--g~L~~~~~-~~~l~vW~l~ 294 (329)
.+.. ... ..-.|+.. + |.|++... ...+.|+.++
T Consensus 222 ~~~g~l~a-DvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 222 ADGRHLTR-DIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp BSSSSBCS-CEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecCCcccc-CcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 2211 111 11233332 2 34666666 7899999886
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=39.59 E-value=1.5e+02 Score=24.05 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=30.8
Q ss_pred ceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeC
Q 037927 242 MFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEY 296 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~ 296 (329)
...|..+|+.+.+... .+..... ....++.. +|++.+... +.+++||.+.+.
T Consensus 263 d~~i~iwd~~~~~~~~-~l~gH~~--~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 263 QNQLVIWKYPTMAKVA-ELKGHTS--RVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TCCEEEEETTTCCEEE-EECCCSS--CEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEECCCCcEEE-EEcCCCC--CEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 4678888987755422 1221111 22344444 677666555 899999988653
No 66
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=39.01 E-value=1.5e+02 Score=23.84 Aligned_cols=141 Identities=9% Similarity=0.050 Sum_probs=74.6
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
..+|.+.+.......+.++++ +++...++.+.. .....++.+|+... + .+.. ..
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-----~~~~~~i~~~~~g~---l-~v~~----------------~~ 202 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITE-SGDITEFKIPTP-----ASGPVGITKGNDDA---L-WFVE----------------II 202 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-----TCCEEEEEECTTSS---E-EEEE----------------TT
T ss_pred cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC-----CCcceeEEECCCCC---E-EEEc----------------cC
Confidence 346666665234578899999 887765422211 11234567776532 2 2221 11
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPD 262 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~ 262 (329)
...+.+|+. ++....... +... ....++.+ +|.+|+... . ...|..||+ +.++..+.+|.
T Consensus 203 ~~~i~~~~~-~g~~~~~~~-----~~~~------~~~~~i~~~~~g~l~v~~~-~----~~~i~~~d~-~g~~~~~~~~~ 264 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKI-----PTPN------ARPHAITAGAGIDLWFTEW-G----ANKIGRLTS-NNIIEEYPIQI 264 (299)
T ss_dssp TTEEEEECT-TCCEEEEEC-----SSTT------CCEEEEEECSTTCEEEEET-T----TTEEEEEET-TTEEEEEECSS
T ss_pred CceEEEECC-CCcEEEEEC-----CCCC------CCceeEEECCCCCEEEecc-C----CceEEEECC-CCceEEEeCCC
Confidence 335677777 666554322 2111 11114444 578766543 2 468999999 45666665664
Q ss_pred CCCCCceeEEEEECCcEEEEEcCCEEEEE
Q 037927 263 FDYAHQAMGLGVVGGRLCLLALGANVELW 291 (329)
Q Consensus 263 ~~~~~~~~~l~~~~g~L~~~~~~~~l~vW 291 (329)
... ....++..+|.|++......+...
T Consensus 265 ~~~--~~~~i~~~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 265 KSA--EPHGICFDGETIWFAMECDKIGKL 291 (299)
T ss_dssp SSC--CEEEEEECSSCEEEEETTTEEEEE
T ss_pred CCC--ccceEEecCCCEEEEecCCcEEEE
Confidence 322 122333367888887654444333
No 67
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=37.69 E-value=82 Score=27.49 Aligned_cols=24 Identities=4% Similarity=-0.061 Sum_probs=20.4
Q ss_pred ECceeeEEeeccccCCceEEEEEECCCccc
Q 037927 226 VNESLHWLTNNQCEFGMFGITAFDLATDKF 255 (329)
Q Consensus 226 ~~G~lywl~~~~~~~~~~~i~~fD~~~~~~ 255 (329)
.+|.+|.-.. ...+.++|..+.+-
T Consensus 110 ~~g~Vy~Gs~------~g~l~ald~~tG~~ 133 (339)
T 2be1_A 110 EDEKVYTGSM------RTIMYTINMLNGEI 133 (339)
T ss_dssp CCEEEEECEE------EEEEEEEETTTCCE
T ss_pred cCCEEEEEec------CCEEEEEECCCCcE
Confidence 8999999877 78999999988643
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=37.31 E-value=1.9e+02 Score=24.60 Aligned_cols=153 Identities=8% Similarity=0.004 Sum_probs=75.6
Q ss_pred ccEEEEEcCCceEEEEcCcccceee-CCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccc
Q 037927 108 GLICLALDNYREIFIWNPSTGAYTK-LPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDI 186 (329)
Q Consensus 108 Glll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 186 (329)
+-+++.......+.+||..+++... +...... .........+.+.+....+ ++... ......
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-l~~~~---------------~d~~~~ 240 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN-SGIKQQLSVVEWHPKNSTR-VATAT---------------GSDNDP 240 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCS-SCCCCCEEEEEECSSCTTE-EEEEE---------------CCSSSC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccc-cccCCceEEEEECCCCCCE-EEEEE---------------CCCCCc
Confidence 5555443567789999998887643 3322110 0001123456666664333 33333 122233
Q ss_pred eEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCccccc-cCCCC
Q 037927 187 QGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSR-VPKPD 262 (329)
Q Consensus 187 ~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~-i~lP~ 262 (329)
.+.+|+.+++.- .... +.... ...-..+.+ +|.+...+. . ...|..+|+.+.+... +....
T Consensus 241 ~i~~~d~~~~~~-~~~~----~~~~~-----~~~v~~~~~s~~~~~~l~s~~-~----dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 241 SILIWDLRNANT-PLQT----LNQGH-----QKGILSLDWCHQDEHLLLSSG-R----DNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp CCCEEETTSTTS-CSBC----CCSCC-----SSCEEEEEECSSCSSCEEEEE-S----SSEEEEECSSSCCEEEEEECSS
T ss_pred eEEEEeCCCCCC-CcEE----eecCc-----cCceeEEEeCCCCCCeEEEEe-C----CCCEEEeeCCCCccceeecCCC
Confidence 678888876531 1111 11000 000012333 455555444 3 5688899988764422 22111
Q ss_pred CCCCCceeEEEEE-CC-cEEEEEc-CCEEEEEEeeeC
Q 037927 263 FDYAHQAMGLGVV-GG-RLCLLAL-GANVELWVMKEY 296 (329)
Q Consensus 263 ~~~~~~~~~l~~~-~g-~L~~~~~-~~~l~vW~l~~~ 296 (329)
. ....+... +| ++.+... ...+.||.++..
T Consensus 306 ~----~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 306 N----WCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp S----CCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred C----ceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 1 11233333 45 5666665 889999998754
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=35.33 E-value=1.9e+02 Score=23.93 Aligned_cols=152 Identities=9% Similarity=0.016 Sum_probs=75.6
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
+.+|-|.+.......+.++|+.+++...+.... .....++.+|+.. +++..... ....
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~i~~~~dg---~l~v~~~~-------------~~~~ 110 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH------KANPAAIKIHKDG---RLFVCYLG-------------DFKS 110 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECS------SSSEEEEEECTTS---CEEEEECT-------------TSSS
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC------CCCcceEEECCCC---cEEEEeCC-------------CCCC
Confidence 456776655245678999999999877653211 1124456777653 23333210 1111
Q ss_pred cceEEEEEcCCCceEE-ecccCcccccccccccccCCCceeEE--CceeeEEeecccc--CCceEEEEEECCCccccccC
Q 037927 185 DIQGIVFTAKTNSWKK-VEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCE--FGMFGITAFDLATDKFSRVP 259 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~-~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~--~~~~~i~~fD~~~~~~~~i~ 259 (329)
...+.+|+..++.-+. ... ..... ....+.+ +|.+|+... ... .....|..+|..+.+...+.
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~----~~~~~-------~~~~i~~d~~g~l~v~~~-~~~~~~~~~~l~~~~~~~~~~~~~~ 178 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIED----LSTAY-------CIDDMVFDSKGGFYFTDF-RGYSTNPLGGVYYVSPDFRTVTPII 178 (333)
T ss_dssp CCEEEEECTTSCSCEEEECS----SSSCC-------CEEEEEECTTSCEEEEEC-CCBTTBCCEEEEEECTTSCCEEEEE
T ss_pred CceEEEEeCCCCEEEEEEcc----CccCC-------cccceEECCCCCEEEEec-cccccCCCceEEEEeCCCCEEEEee
Confidence 2456777777665442 221 11000 0112333 577666443 210 11367899998876655431
Q ss_pred CCCCCCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEee
Q 037927 260 KPDFDYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMK 294 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~ 294 (329)
- ... ....++.. +|+ |++... ...+.+|.++
T Consensus 179 ~--~~~--~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 179 Q--NIS--VANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp E--EES--SEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred c--CCC--cccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 1 110 11223333 454 666655 5667777664
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=34.83 E-value=2e+02 Score=23.99 Aligned_cols=144 Identities=15% Similarity=0.078 Sum_probs=71.0
Q ss_pred ccccEEEEEcCCceEEEEcCcccce---eeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCC
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAY---TKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSR 182 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~---~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (329)
.+|-+++.......+.+||..++++ ..+.... .....+.+.+. +.+-+ ...
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~-~~~l~-~~~----------------- 71 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-------GQVTGVDWAPD-SNRIV-TCG----------------- 71 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-------SCEEEEEEETT-TTEEE-EEE-----------------
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-------CcccEEEEeCC-CCEEE-EEc-----------------
Confidence 3444444424677889999988853 3343221 12345666664 33322 222
Q ss_pred cccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccc----c
Q 037927 183 CIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKF----S 256 (329)
Q Consensus 183 ~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~----~ 256 (329)
....+.+|+..++.+..... ..... .... .+.+ +|.....+. . ...|..+|+.+.+- .
T Consensus 72 -~dg~i~vwd~~~~~~~~~~~----~~~~~-----~~v~-~~~~~~~~~~l~~~~-~----d~~v~i~d~~~~~~~~~~~ 135 (372)
T 1k8k_C 72 -TDRNAYVWTLKGRTWKPTLV----ILRIN-----RAAR-CVRWAPNEKKFAVGS-G----SRVISICYFEQENDWWVCK 135 (372)
T ss_dssp -TTSCEEEEEEETTEEEEEEE----CCCCS-----SCEE-EEEECTTSSEEEEEE-T----TSSEEEEEEETTTTEEEEE
T ss_pred -CCCeEEEEECCCCeeeeeEE----eecCC-----Ccee-EEEECCCCCEEEEEe-C----CCEEEEEEecCCCcceeee
Confidence 13467888888877654432 11110 0000 2222 454444444 2 34666677665541 1
Q ss_pred ccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEee
Q 037927 257 RVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 257 ~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~ 294 (329)
.+..+... ....+... +|++.++.. ...+.+|.+.
T Consensus 136 ~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 136 HIKKPIRS---TVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EECTTCCS---CEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred eeecccCC---CeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 12222111 22334433 566666665 8889999864
No 71
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=34.74 E-value=2.1e+02 Score=24.23 Aligned_cols=145 Identities=10% Similarity=0.032 Sum_probs=71.5
Q ss_pred Ecccccc-EEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 103 IGSCHGL-ICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 103 ~~s~~Gl-ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.-+.+|- +++.......+.+||+.|++....-.... ....+.+++..+ +-++ ..
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-------~v~~~~~spdg~-~l~~-~~---------------- 92 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-------SPQGVAVSPDGK-QVYV-TN---------------- 92 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-------SEEEEEECTTSS-EEEE-EE----------------
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-------CccceEECCCCC-EEEE-EE----------------
Confidence 3344554 43442466789999999988754322211 233566666533 3222 22
Q ss_pred CcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECce-eeEEeeccccCCceEEEEEECCCcccccc-C
Q 037927 182 RCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNES-LHWLTNNQCEFGMFGITAFDLATDKFSRV-P 259 (329)
Q Consensus 182 ~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~ 259 (329)
.....+.+|+..++.-...-. ..... . ...+.-+|. +|..+. . ...|..+|+.+.+.... .
T Consensus 93 -~~~~~v~v~d~~~~~~~~~~~----~~~~~-----~--~~~~s~dg~~l~~~~~-~----~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 93 -MASSTLSVIDTTSNTVAGTVK----TGKSP-----L--GLALSPDGKKLYVTNN-G----DKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp -TTTTEEEEEETTTTEEEEEEE----CSSSE-----E--EEEECTTSSEEEEEET-T----TTEEEEEETTTTEEEEEEE
T ss_pred -CCCCEEEEEECCCCeEEEEEe----CCCCc-----c--eEEECCCCCEEEEEeC-C----CCEEEEEECCCCcEEEEEe
Confidence 123568899988775322211 11111 0 002222465 444333 2 56888999987765432 2
Q ss_pred CCCCCCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEee
Q 037927 260 KPDFDYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMK 294 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~ 294 (329)
... ....+... +|+ |++... ...+.+|.++
T Consensus 156 ~~~-----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 156 VGR-----SPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp CCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cCC-----CcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 211 11223332 444 444444 6677777664
No 72
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=34.42 E-value=2e+02 Score=23.78 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=22.7
Q ss_pred ECceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 226 VNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 226 ~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
-+|. .|++. ...|..||+..+....+.+|..
T Consensus 248 ~~G~-lwv~~------~~gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 248 RGGW-LWSSS------GTGVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp TTSC-EEECC------SSEEEEECTTSCEEEEEECSSC
T ss_pred CCCC-EEEec------CCcEEEECCCCCEEEEEECCCc
Confidence 4588 45555 3469999998888888888764
No 73
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=32.56 E-value=2.2e+02 Score=23.75 Aligned_cols=93 Identities=12% Similarity=0.030 Sum_probs=48.4
Q ss_pred cceEEEEEcCC---CceEEecccCcccccccccccccCCCcee-EECceeeEEeeccccCCceEEEEEECCCccc-cccC
Q 037927 185 DIQGIVFTAKT---NSWKKVEHSFGSIHCCCEARNLQGRPMGT-LVNESLHWLTNNQCEFGMFGITAFDLATDKF-SRVP 259 (329)
Q Consensus 185 ~~~~~vyss~t---~~W~~~~~~~~~~p~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~-~~i~ 259 (329)
...+.++.... ..++.+.. .|... ....+++ +.+|.+|.-++ ... ...|..+|+++.+- ..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~vv~~----~phd~-----~~ftqGL~~~~~~LyestG-~~g--~S~v~~vD~~Tgkv~~~~~ 82 (262)
T 3nol_A 15 VPRGSHMATPSIPIYDYQIVHS----YPHDT-----KAFTEGFFYRNGYFYESTG-LNG--RSSIRKVDIESGKTLQQIE 82 (262)
T ss_dssp ----------CCCEEEEEEEEE----EECCT-----TCEEEEEEEETTEEEEEEE-ETT--EEEEEEECTTTCCEEEEEE
T ss_pred cceEEEecCCCCcccceEEEEE----ecCCC-----CcccceEEEECCEEEEECC-CCC--CceEEEEECCCCcEEEEEe
Confidence 34445554332 23555555 56544 1212244 34777777665 321 45899999998765 4457
Q ss_pred CCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEE
Q 037927 260 KPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWV 292 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~ 292 (329)
+|... +.--++..+++|+++.- ...+.++-
T Consensus 83 l~~~~---FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 83 LGKRY---FGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp CCTTC---CEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cCCcc---ceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 76543 33346667888888875 44444333
No 74
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.46 E-value=2.6e+02 Score=24.59 Aligned_cols=151 Identities=7% Similarity=-0.042 Sum_probs=77.3
Q ss_pred EEEccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCC
Q 037927 101 RFIGSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDN 180 (329)
Q Consensus 101 ~~~~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (329)
.+.-..+|-|.+.......+.++|+.+++...+...... .. +++++..+ .++...
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~------~~--ia~~~~g~--~l~~~d--------------- 189 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG------GK--PAVTKDKQ--RVYSIG--------------- 189 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB------CB--CEECTTSS--EEEEEB---------------
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC------Cc--eeEecCCC--cEEEEe---------------
Confidence 333346677666634567899999999887765443211 11 45566543 222222
Q ss_pred CCcccceEEEEEcCCC-ceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCcccc
Q 037927 181 SRCIDIQGIVFTAKTN-SWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFS 256 (329)
Q Consensus 181 ~~~~~~~~~vyss~t~-~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~ 256 (329)
......+.+++..++ ..+.+.. .+... .....++.+ +|.+|+... ...|..+|+.+....
T Consensus 190 -~~~~~~I~~~d~~~~~~~~~~g~----~~~~~-----~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 190 -WEGTHTVYVYMKASGWAPTRIGQ----LGSTF-----SGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVT 253 (409)
T ss_dssp -SSTTCEEEEEEGGGTTCEEEEEE----CCTTS-----CSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEE
T ss_pred -cCCCceEEEEEcCCCceeEEeee----ccchh-----cCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEE
Confidence 111226666666543 2333321 11100 011113333 688998333 468999999877654
Q ss_pred cc-CCCCCCCCCce-e-EEEEE--CCcEEEEEc-CCEEEEEE
Q 037927 257 RV-PKPDFDYAHQA-M-GLGVV--GGRLCLLAL-GANVELWV 292 (329)
Q Consensus 257 ~i-~lP~~~~~~~~-~-~l~~~--~g~L~~~~~-~~~l~vW~ 292 (329)
.+ ..+........ . .++.. +|.|++... ...+..|.
T Consensus 254 ~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~ 295 (409)
T 3hrp_A 254 LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKIT 295 (409)
T ss_dssp EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 44 11111111122 2 56655 588888876 55555543
No 75
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=31.09 E-value=22 Score=20.93 Aligned_cols=16 Identities=38% Similarity=0.538 Sum_probs=11.6
Q ss_pred CCCcHHHHHHHHhcCC
Q 037927 2 SNLPDDVLIEVLSRLP 17 (329)
Q Consensus 2 ~~LP~Dll~eIL~rLp 17 (329)
..||.|+-.|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 3688888888877544
No 76
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=31.01 E-value=2.2e+02 Score=23.37 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=40.3
Q ss_pred eeE-ECceeeEEeeccccCCceEEEEEECCCccc-cccCCCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEE
Q 037927 223 GTL-VNESLHWLTNNQCEFGMFGITAFDLATDKF-SRVPKPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWV 292 (329)
Q Consensus 223 ~v~-~~G~lywl~~~~~~~~~~~i~~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~ 292 (329)
++. .+|.+|.-++ ... ...|..+|+++.+- ..+++|... +.--++..+++|+++.- ...+.++-
T Consensus 25 GL~~~~~~LyestG-~~g--~S~v~~vD~~tgkv~~~~~l~~~~---fgeGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 25 GLFYLRGHLYESTG-ETG--RSSVRKVDLETGRILQRAEVPPPY---FGAGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EEEEETTEEEEEEC-CTT--SCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cEEEECCEEEEECC-CCC--CceEEEEECCCCCEEEEEeCCCCc---ceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 554 4566666555 321 45899999998766 445777654 33456667888888875 44444433
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=30.88 E-value=2.6e+02 Score=24.08 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=28.7
Q ss_pred eEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEE-EEc-CCEEEEEEeee
Q 037927 243 FGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCL-LAL-GANVELWVMKE 295 (329)
Q Consensus 243 ~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~-~~~-~~~l~vW~l~~ 295 (329)
..|..+|+.+.+.... ++... ....+... +|+..+ ... ...+.||.+++
T Consensus 381 g~v~~~d~~~~~~~~~-~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 381 GKVYVIDTTTDTVKEF-WEAGN---QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CEEEEEETTTTEEEEE-EECSS---SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred eEEEEEECCCCcEEEE-ecCCC---CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 4899999987654322 11111 12234443 565444 444 88999999874
No 78
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=30.41 E-value=2.7e+02 Score=24.20 Aligned_cols=58 Identities=10% Similarity=0.076 Sum_probs=35.2
Q ss_pred CceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEEee
Q 037927 227 NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 227 ~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~l~ 294 (329)
+|.|||... . ...|..+|+....-..+. ..... .-..+++.+|.|++... ... |++.+
T Consensus 257 ~~~lY~aD~-~----~~~I~~~d~dG~~~~~~~-~~~~~--~P~giav~~~~ly~td~~~~~--V~~~~ 315 (386)
T 3v65_B 257 GRRMYWVDA-K----HHVIERANLDGSHRKAVI-SQGLP--HPFAITVFEDSLYWTDWHTKS--INSAN 315 (386)
T ss_dssp GTEEEEEET-T----TTEEEEECTTSCSCEEEE-CSSCS--SEEEEEEETTEEEEEETTTTE--EEEEE
T ss_pred CCEEEEEEC-C----CCEEEEEeCCCCeeEEEE-ECCCC--CceEEEEECCEEEEeeCCCCe--EEEEE
Confidence 689999866 4 568999998764333221 11111 22356667889998887 444 44444
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=30.19 E-value=2.2e+02 Score=23.14 Aligned_cols=60 Identities=5% Similarity=0.030 Sum_probs=34.5
Q ss_pred CceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeee
Q 037927 227 NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 227 ~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~ 295 (329)
+|.....+. . ...|..+|+.+.+...+.. ... ....+... +|++.+... ...+.+|.++.
T Consensus 235 ~~~~l~~~~-~----~~~i~~~~~~~~~~~~~~~--~~~--~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 235 TGEWLAVGM-E----SSNVEVLHVNKPDKYQLHL--HES--CVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp TSSEEEEEE-T----TSCEEEEETTSSCEEEECC--CSS--CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEc-C----CCcEEEEECCCCCeEEEcC--Ccc--ceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 455444444 3 4678889988776433321 111 12233333 567666555 88899998764
No 80
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=29.23 E-value=2.1e+02 Score=22.57 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=70.4
Q ss_pred CCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCC
Q 037927 116 NYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKT 195 (329)
Q Consensus 116 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t 195 (329)
....+.+||+.+++...+...... ...+.+.|... +-+ ... ...+.+++..+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~-------v~~~~~spdg~-~l~-~~~-------------------~~~i~~~d~~~ 71 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPEL-------FEAPNWSPDGK-YLL-LNS-------------------EGLLYRLSLAG 71 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSC-------CEEEEECTTSS-EEE-EEE-------------------TTEEEEEESSS
T ss_pred cceeEEEEeCCCCceeeeccCCcc-------eEeeEECCCCC-EEE-EEc-------------------CCeEEEEeCCC
Confidence 356789999999987765443211 22455666533 322 221 23688889888
Q ss_pred -CceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEEE
Q 037927 196 -NSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLGV 274 (329)
Q Consensus 196 -~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~ 274 (329)
+....+.. ..... . . ......-+|.....+. ........|..+|..+.+...+..... ...+..
T Consensus 72 ~~~~~~~~~----~~~~~---~-~-~~~~~spdg~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 136 (297)
T 2ojh_A 72 DPSPEKVDT----GFATI---C-N-NDHGISPDGALYAISD-KVEFGKSAIYLLPSTGGTPRLMTKNLP-----SYWHGW 136 (297)
T ss_dssp CCSCEECCC----TTCCC---B-C-SCCEECTTSSEEEEEE-CTTTSSCEEEEEETTCCCCEECCSSSS-----EEEEEE
T ss_pred CCCceEecc----ccccc---c-c-cceEECCCCCEEEEEE-eCCCCcceEEEEECCCCceEEeecCCC-----ccceEE
Confidence 76655442 11101 0 0 1102223555333333 221125688888988776544432221 122333
Q ss_pred E-CCcE-EEEEc-CCEEEEEEeee
Q 037927 275 V-GGRL-CLLAL-GANVELWVMKE 295 (329)
Q Consensus 275 ~-~g~L-~~~~~-~~~l~vW~l~~ 295 (329)
. +|+. ++... ...+.||.++.
T Consensus 137 spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 137 SPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEET
T ss_pred CCCCCEEEEEECCCCceEEEEEEC
Confidence 3 5654 43444 77788998764
No 81
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=29.22 E-value=2.6e+02 Score=23.67 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=19.1
Q ss_pred cccccEEEEEcCCceEEEEcCcccceee
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTK 132 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~ 132 (329)
+.+|-.++.......+.+||..+++...
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4466555543566788999998887653
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=28.65 E-value=2.5e+02 Score=23.29 Aligned_cols=61 Identities=10% Similarity=0.082 Sum_probs=33.4
Q ss_pred ceEEEEEECCCccccc--cCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeCCCccceEEe
Q 037927 242 MFGITAFDLATDKFSR--VPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEYGVKCSWQKH 305 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~--i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~~~~~~W~~~ 305 (329)
...|..+|+.+.+... ..+...........+... +|++.++.. ...+.||.++.. ..|...
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~---~~~~~~ 294 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE---GKWEPA 294 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET---TEEEEE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC---Cccccc
Confidence 4678888888753211 111111111122233333 566555555 888999999862 458777
No 83
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.10 E-value=71 Score=20.95 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=20.2
Q ss_pred cEEEEEcCCceEEEEcCcccceeeCCCCC
Q 037927 109 LICLALDNYREIFIWNPSTGAYTKLPADP 137 (329)
Q Consensus 109 lll~~~~~~~~~~V~NP~T~~~~~LP~~~ 137 (329)
+.... ...++.|.+||.|++-..--|..
T Consensus 22 W~~v~-T~dGR~fyyN~~Tk~S~WekP~e 49 (73)
T 2dk7_A 22 WCVVW-TGDERVFFYNPTTRLSMWDRPDD 49 (73)
T ss_dssp CEEEE-ESSSCEEEEETTTTEECSSCCTT
T ss_pred cEEEE-CCCCCEEEecCcccceeccCChH
Confidence 44444 57889999999999987643333
No 84
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=27.71 E-value=2.9e+02 Score=23.62 Aligned_cols=144 Identities=8% Similarity=-0.014 Sum_probs=72.8
Q ss_pred ccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCc
Q 037927 104 GSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRC 183 (329)
Q Consensus 104 ~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 183 (329)
+..+|.|.+.......+.+.++-.+....+.... .....++++|+..+. +.+.. ..
T Consensus 124 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~------l~~P~~iavdp~~g~--ly~td----------------~~ 179 (349)
T 3v64_C 124 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS------LEKPRAIALHPMEGT--IYWTD----------------WG 179 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT------CSCEEEEEEETTTTE--EEEEE----------------CS
T ss_pred ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC------CCCcceEEEecCcCe--EEEec----------------cC
Confidence 3345555554234556777777655433332211 122346778876442 22222 11
Q ss_pred ccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCcccccc-C
Q 037927 184 IDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRV-P 259 (329)
Q Consensus 184 ~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~ 259 (329)
....++.++.....-+.+.. ... ..+.++.+ +|.+||... . ...|..+|+....-..+ .
T Consensus 180 ~~~~I~r~~~dG~~~~~~~~------~~~------~~PnGla~d~~~~~lY~aD~-~----~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 180 NTPRIEASSMDGSGRRIIAD------THL------FWPNGLTIDYAGRRMYWVDA-K----HHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp SSCEEEEEETTSCSCEESCC------SSC------SCEEEEEEETTTTEEEEEET-T----TTEEEEEETTSCSCEEEEC
T ss_pred CCCEEEEEeCCCCCcEEEEE------CCC------CCcceEEEeCCCCEEEEEEC-C----CCEEEEEeCCCCceEEEEe
Confidence 13566666665433222211 111 11224444 689999766 3 46899999886433322 2
Q ss_pred CCCCCCCCceeEEEEECCcEEEEEc-CCEEEEEEee
Q 037927 260 KPDFDYAHQAMGLGVVGGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 260 lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~vW~l~ 294 (329)
.. .. .-..+++.+|.|++... ... |+..+
T Consensus 243 ~~--~~--~P~giav~~~~ly~td~~~~~--V~~~~ 272 (349)
T 3v64_C 243 QG--LP--HPFAITVFEDSLYWTDWHTKS--INSAN 272 (349)
T ss_dssp SS--CS--SEEEEEEETTEEEEEETTTTE--EEEEE
T ss_pred CC--CC--CceEEEEECCEEEEecCCCCe--EEEEE
Confidence 21 11 22345667889999886 444 44444
No 85
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.35 E-value=3.1e+02 Score=23.87 Aligned_cols=52 Identities=8% Similarity=0.070 Sum_probs=28.6
Q ss_pred ceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CC-cEEEEEc-CCEEEEEEeee
Q 037927 242 MFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GG-RLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g-~L~~~~~-~~~l~vW~l~~ 295 (329)
...|..+|+.+..-....+..... ....+... +| .+++... ...+.||.+..
T Consensus 299 dg~v~vwd~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 299 DKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TSEEEEEETTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCeEEEEeCCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 568999999874311111211111 12233333 34 4566555 88899999875
No 86
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=27.17 E-value=2.7e+02 Score=23.12 Aligned_cols=160 Identities=8% Similarity=0.031 Sum_probs=74.7
Q ss_pred EccccccEEEEEcCCceEEEEcCc-ccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 103 IGSCHGLICLALDNYREIFIWNPS-TGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 103 ~~s~~Glll~~~~~~~~~~V~NP~-T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.-+-+|-+++.......+.+|+.. +++...+....... ......+.++|.. .+-+ ... .
T Consensus 147 ~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---g~~p~~~~~spdg-~~l~-v~~---------------~ 206 (347)
T 3hfq_A 147 DLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA---GFGPRHLVFSPDG-QYAF-LAG---------------E 206 (347)
T ss_dssp EECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT---TCCEEEEEECTTS-SEEE-EEE---------------T
T ss_pred EECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC---CCCCceEEECCCC-CEEE-EEe---------------C
Confidence 334456544442345678888887 56554332111100 1112246677753 3322 222 1
Q ss_pred CcccceEEEEEcC--CCceEEecccCcccccccccccccCCCce--eEECce-eeEEeeccccCCceEEEEEECCCc-cc
Q 037927 182 RCIDIQGIVFTAK--TNSWKKVEHSFGSIHCCCEARNLQGRPMG--TLVNES-LHWLTNNQCEFGMFGITAFDLATD-KF 255 (329)
Q Consensus 182 ~~~~~~~~vyss~--t~~W~~~~~~~~~~p~~~~~~~~~~~~~~--v~~~G~-lywl~~~~~~~~~~~i~~fD~~~~-~~ 255 (329)
. ...+.+|+.. ++.++..... ...+... ........ +.-+|. +|.... . ...|..||+... +.
T Consensus 207 ~--~~~v~v~~~~~~~g~~~~~~~~-~~~~~~~---~~~~~~~~i~~spdG~~l~v~~~-~----~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 207 L--SSQIASLKYDTQTGAFTQLGIV-KTIPADY---TAHNGAAAIRLSHDGHFLYVSNR-G----YNTLAVFAVTADGHL 275 (347)
T ss_dssp T--TTEEEEEEEETTTTEEEEEEEE-ESSCTTC---CSCCEEEEEEECTTSCEEEEEEE-T----TTEEEEEEECGGGCE
T ss_pred C--CCEEEEEEecCCCCceEEeeee-eecCCCC---CCCCcceeEEECCCCCEEEEEeC-C----CCEEEEEEECCCCcE
Confidence 1 2345666654 5666544330 0122211 00000112 333576 555443 2 467888888632 44
Q ss_pred ccc-CCCCCCCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEeee
Q 037927 256 SRV-PKPDFDYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMKE 295 (329)
Q Consensus 256 ~~i-~lP~~~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~~ 295 (329)
..+ .+|.... ....++.. +|+ |++... ...+.||.++.
T Consensus 276 ~~~~~~~~~~~--~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 276 TLIQQISTEGD--FPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEEECSSS--CCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEeEEEecCCC--CcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 433 3333211 11234444 566 555555 68999999974
No 87
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=25.20 E-value=2.6e+02 Score=22.31 Aligned_cols=142 Identities=11% Similarity=0.023 Sum_probs=75.2
Q ss_pred ccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
.+|.+.+.......+.++||. ++...++.+.. .....++.+|+..+ +.... ...
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-----~~~~~~i~~d~~g~---l~v~~-----------------~~~ 166 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK-----GSYPAFITLGSDNA---LWFTE-----------------NQN 166 (300)
T ss_dssp STTCEEEEETTTTEEEEECTT-SCEEEEECSST-----TCCEEEEEECTTSS---EEEEE-----------------TTT
T ss_pred CCCCEEEEccCCCeEEEECCC-CCEEEccCCCC-----CCCceeEEECCCCC---EEEEe-----------------cCC
Confidence 467666662346788899987 66554332111 12244566776533 22222 112
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
..+.+|+. ++...... .+... ....++.+ +|.+|+... . ...|..||. +.++..+.+|..
T Consensus 167 ~~i~~~~~-~g~~~~~~-----~~~~~------~~~~~i~~d~~g~l~v~~~-~----~~~i~~~~~-~g~~~~~~~~~~ 228 (300)
T 2qc5_A 167 NSIGRITN-TGKLEEYP-----LPTNA------AAPVGITSGNDGALWFVEI-M----GNKIGRITT-TGEISEYDIPTP 228 (300)
T ss_dssp TEEEEECT-TCCEEEEE-----CSSTT------CCEEEEEECTTSSEEEEET-T----TTEEEEECT-TCCEEEEECSST
T ss_pred CeEEEECC-CCcEEEee-----CCCCC------CCcceEEECCCCCEEEEcc-C----CCEEEEEcC-CCcEEEEECCCC
Confidence 34666766 55555432 12111 11114444 577776554 2 357999999 555655555533
Q ss_pred CCCCceeEEEEE-CCcEEEEEc-CCEEEEEEe
Q 037927 264 DYAHQAMGLGVV-GGRLCLLAL-GANVELWVM 293 (329)
Q Consensus 264 ~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l 293 (329)
.. ....++.. +|+|++... ...+..+..
T Consensus 229 ~~--~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 229 NA--RPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TC--CEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CC--CceEEEECCCCCEEEeccCCCeEEEECC
Confidence 22 22344443 678888876 566666544
No 88
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=25.10 E-value=1.7e+02 Score=28.08 Aligned_cols=25 Identities=16% Similarity=0.070 Sum_probs=21.4
Q ss_pred eeEECceeeEEeeccccCCceEEEEEECCCc
Q 037927 223 GTLVNESLHWLTNNQCEFGMFGITAFDLATD 253 (329)
Q Consensus 223 ~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~ 253 (329)
+++.+|.+|..+. ...|.++|.++.
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG 97 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTG 97 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTT
T ss_pred CEEECCEEEEECC------CCeEEEEECCCC
Confidence 7889999998777 678999998764
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=24.89 E-value=2.8e+02 Score=22.58 Aligned_cols=64 Identities=14% Similarity=0.143 Sum_probs=36.9
Q ss_pred ceEEEEEECC--Ccccccc-CCCCCCCCCceeEEEEE-CCc-EEEEEc-CCEEEEEEeeeCCCccceEEeeccceEEec
Q 037927 242 MFGITAFDLA--TDKFSRV-PKPDFDYAHQAMGLGVV-GGR-LCLLAL-GANVELWVMKEYGVKCSWQKHYCLGISISA 314 (329)
Q Consensus 242 ~~~i~~fD~~--~~~~~~i-~lP~~~~~~~~~~l~~~-~g~-L~~~~~-~~~l~vW~l~~~~~~~~W~~~~~~~~~i~~ 314 (329)
...|..||+. +.+...+ .++.... ...++.. +|+ |++... ...+.||.++... +.++.+ ..++.
T Consensus 252 ~~~i~v~d~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~--g~~~~~----~~~~~ 321 (343)
T 1ri6_A 252 ASLITVFSVSEDGSVLSKEGFQPTETQ---PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ--GLLHEK----GRYAV 321 (343)
T ss_dssp TTEEEEEEECTTSCCEEEEEEEECSSS---CCCEEECTTSSEEEEECTTTCEEEEEEEETTT--TEEEEE----EEEEC
T ss_pred CCEEEEEEEcCCCCceEEeeeecCCCc---cceEEECCCCCEEEEecCCCCeEEEEEEcCCC--ceeeEc----ccccc
Confidence 4688888887 4444444 2332221 1133333 566 444444 7899999998532 457777 66655
No 90
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=23.32 E-value=5e+02 Score=24.90 Aligned_cols=138 Identities=9% Similarity=0.040 Sum_probs=72.1
Q ss_pred ccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCccc
Q 037927 106 CHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCID 185 (329)
Q Consensus 106 ~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 185 (329)
.+|-|.+. .....++.+||.|+++..++..... ......+..|... + +.+.. .
T Consensus 416 ~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~~----~~~v~~i~~d~~g---~-lwigt------------------~ 468 (781)
T 3v9f_A 416 SEGNLWFG-TYLGNISYYNTRLKKFQIIELEKNE----LLDVRVFYEDKNK---K-IWIGT------------------H 468 (781)
T ss_dssp TTSCEEEE-ETTEEEEEECSSSCEEEECCSTTTC----CCCEEEEEECTTS---E-EEEEE------------------T
T ss_pred CCCCEEEE-eccCCEEEEcCCCCcEEEeccCCCC----CCeEEEEEECCCC---C-EEEEE------------------C
Confidence 45666555 3456788999999988877643111 1122334444332 1 34441 1
Q ss_pred ceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCccccccCCCCC
Q 037927 186 IQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDF 263 (329)
Q Consensus 186 ~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~ 263 (329)
..+..|+..++.|+.... .+... .....-..++. +|.+ |++. . ...|..||..++++..+..+..
T Consensus 469 ~Gl~~~~~~~~~~~~~~~----~~~~~---~~~~~i~~i~~d~~g~l-Wigt-~----~~Gl~~~~~~~~~~~~~~~~~~ 535 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYD----TSNSQ---LLENFVRSIAQDSEGRF-WIGT-F----GGGVGIYTPDMQLVRKFNQYEG 535 (781)
T ss_dssp TEEEEEESSSSSCCEEEC----TTTSS---CSCSCEEEEEECTTCCE-EEEE-S----SSCEEEECTTCCEEEEECTTTT
T ss_pred CceEEEeCCCCeEEeccc----Ccccc---cccceeEEEEEcCCCCE-EEEE-c----CCCEEEEeCCCCeEEEccCCCC
Confidence 356788888888876643 11000 00011113333 3554 6665 3 2568889999988877654433
Q ss_pred CCCCceeEEEE-ECCcEEEEE
Q 037927 264 DYAHQAMGLGV-VGGRLCLLA 283 (329)
Q Consensus 264 ~~~~~~~~l~~-~~g~L~~~~ 283 (329)
........+.+ .+|.|.+.+
T Consensus 536 l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEEE
T ss_pred CCCCeeEEEEECCCCCEEEEE
Confidence 32212233333 256666654
No 91
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=23.31 E-value=3.1e+02 Score=22.43 Aligned_cols=69 Identities=9% Similarity=0.032 Sum_probs=42.1
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
..+|.|.+......+++.+||.|++...+.... ...+++.++..+ ++...
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~--------~~~~i~~~~dG~---l~v~~------------------- 71 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA--------PVSSVALRQSGG---YVATI------------------- 71 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS--------CEEEEEEBTTSS---EEEEE-------------------
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC--------ceEEEEECCCCC---EEEEE-------------------
Confidence 445555555346778999999998876543321 133566676644 22222
Q ss_pred cceEEEEEcCCCceEEecc
Q 037927 185 DIQGIVFTAKTNSWKKVEH 203 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~ 203 (329)
...+.+|+..++..+.+..
T Consensus 72 ~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEe
Confidence 2357788888888877654
No 92
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=22.73 E-value=5.5e+02 Score=25.14 Aligned_cols=81 Identities=15% Similarity=0.020 Sum_probs=44.5
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCccccccCCC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKP 261 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP 261 (329)
...+++++.....-+.+.. ... ..+.++.+ +|.|||... .. ...|..+++....-..+..
T Consensus 492 ~~~I~v~~ldG~~~~~l~~------~~l------~~P~gIaVDp~~g~LYwtD~-g~---~~~I~~~~~dG~~~~~lv~- 554 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFR------ENG------SKPRAIVVDPVHGFMYWTDW-GT---PAKIKKGGLNGVDIYSLVT- 554 (791)
T ss_dssp TTEEEEEETTSSSEEEEEE------CTT------CCEEEEEEETTTTEEEEEEC-SS---SCEEEEEETTSCCEEEEEC-
T ss_pred CCeEEEEeCCCCeEEEEEe------CCC------CCcceEEEecCCCCEEEecC-CC---CCeEEEEecCCCceEEEEe-
Confidence 4467888877655444432 011 11225555 589999865 21 3689999988665443311
Q ss_pred CCCCCCceeEEEEE--CCcEEEEEc
Q 037927 262 DFDYAHQAMGLGVV--GGRLCLLAL 284 (329)
Q Consensus 262 ~~~~~~~~~~l~~~--~g~L~~~~~ 284 (329)
.... .-..|++. +|+||++..
T Consensus 555 ~~l~--~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 555 ENIQ--WPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp SSCS--CEEEEEEETTTTEEEEEET
T ss_pred CCCC--CceEEEEecCCCeEEEEeC
Confidence 1111 12245544 678888876
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=22.61 E-value=3.2e+02 Score=22.46 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=17.4
Q ss_pred cccccEEEEEcCCceEEEEcCcccce
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAY 130 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~ 130 (329)
+.+|-.++....+..+.|||..+++.
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~ 47 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQ 47 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEE
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 44565555535677888999887653
No 94
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=22.43 E-value=3.3e+02 Score=22.53 Aligned_cols=62 Identities=16% Similarity=0.075 Sum_probs=38.6
Q ss_pred eeEEC--ceeeEEeeccccCCceEEEEEECCCcccc-ccCCCCCCCCCceeEEEEECCcEEEEEc-CCEEEE
Q 037927 223 GTLVN--ESLHWLTNNQCEFGMFGITAFDLATDKFS-RVPKPDFDYAHQAMGLGVVGGRLCLLAL-GANVEL 290 (329)
Q Consensus 223 ~v~~~--G~lywl~~~~~~~~~~~i~~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~v 290 (329)
++.++ |.+|...+ ... ...|..+|+++.+-. .+++|... +...++..+++|+++.. ...+.+
T Consensus 25 Gl~~~~dg~Lyvstg-~~~--~s~v~~iD~~tg~v~~~i~l~~~~---fgeGi~~~g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 25 GLVYAENDTLFESTG-LYG--RSSVRQVALQTGKVENIHKMDDSY---FGEGLTLLNEKLYQVVWLKNIGFI 90 (266)
T ss_dssp EEEECSTTEEEEEEC-STT--TCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEETTCSEEEE
T ss_pred cEEEeCCCeEEEECC-CCC--CCEEEEEECCCCCEEEEEecCCCc---ceEEEEEeCCEEEEEEecCCEEEE
Confidence 45443 67777654 221 479999999987653 44666543 22345566788888886 555444
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=22.23 E-value=3.8e+02 Score=23.11 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=31.3
Q ss_pred ceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeeeCC
Q 037927 242 MFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKEYG 297 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~~~ 297 (329)
...|..+|..+.+-.. .+..... ....++.. +|+..+... +.+++||.+.+..
T Consensus 343 d~~I~iwd~~~~~~v~-~l~gH~~--~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVA-ELKGHTS--RVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TCCEEEEETTTCCEEE-EECCCSS--CEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCEEEEEECCCCcEEE-EEcCCCC--CEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 4678888887654321 2222111 23344444 677666555 8999999986543
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=21.66 E-value=3.4e+02 Score=22.29 Aligned_cols=152 Identities=8% Similarity=0.002 Sum_probs=0.0
Q ss_pred EEccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 102 FIGSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 102 ~~~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.+...+..+.+. .....+.++|+.|++....-....... ......+.+++..+..-+....
T Consensus 191 ~~s~dg~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~---------------- 251 (353)
T 3vgz_A 191 ALDSEGKRLYTT-NADGELITIDTADNKILSRKKLLDDGK--EHFFINISLDTARQRAFITDSK---------------- 251 (353)
T ss_dssp EEETTTTEEEEE-CTTSEEEEEETTTTEEEEEEECCCSSS--CCCEEEEEEETTTTEEEEEESS----------------
T ss_pred EECCCCCEEEEE-cCCCeEEEEECCCCeEEEEEEcCCCCC--CcccceEEECCCCCEEEEEeCC----------------
Q ss_pred CcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCcccccc-CC
Q 037927 182 RCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRV-PK 260 (329)
Q Consensus 182 ~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i-~l 260 (329)
...+.+|+..++.-...-. ..-+... .+.-+|...|++. .. ...|..+|+.+.+.... +.
T Consensus 252 ---~~~v~~~d~~~~~~~~~~~--~~~~~~~----------~~s~dg~~l~v~~-~~---~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 252 ---AAEVLVVDTRNGNILAKVA--APESLAV----------LFNPARNEAYVTH-RQ---AGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp ---SSEEEEEETTTCCEEEEEE--CSSCCCE----------EEETTTTEEEEEE-TT---TTEEEEEETTTTEEEEEEEC
T ss_pred ---CCEEEEEECCCCcEEEEEE--cCCCceE----------EECCCCCEEEEEE-CC---CCeEEEEECCCCeEEEEEec
Q ss_pred CCCCCCCceeEEEEECCcEEEEEc---------CCEEEEEEee
Q 037927 261 PDFDYAHQAMGLGVVGGRLCLLAL---------GANVELWVMK 294 (329)
Q Consensus 261 P~~~~~~~~~~l~~~~g~L~~~~~---------~~~l~vW~l~ 294 (329)
+... ....+.-.+..|++... ...-.||.++
T Consensus 313 ~~~~---~~~~~s~dg~~l~v~~~~~~~~~~~~~~~~~v~~i~ 352 (353)
T 3vgz_A 313 PTHP---NSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIA 352 (353)
T ss_dssp CSEE---EEEEECTTSCEEEEEEECCCBTTBCCSSCEEEEEEE
T ss_pred CCCC---CeEEEcCCCCEEEEEEcccccccccccCCCcEEEEe
No 97
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=21.66 E-value=3.1e+02 Score=21.85 Aligned_cols=138 Identities=11% Similarity=0.003 Sum_probs=71.5
Q ss_pred EEEccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCC
Q 037927 101 RFIGSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDN 180 (329)
Q Consensus 101 ~~~~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (329)
.+.-..+|-+.+.......+.++||. ++...++.+.. .....++..|+... +....
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~-----~~~~~~i~~~~~g~---l~v~~--------------- 79 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP-----DAKVMCLIVSSLGD---IWFTE--------------- 79 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-----TCCEEEEEECTTSC---EEEEE---------------
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC-----CCcceeEEECCCCC---EEEEe---------------
Confidence 34445567776663456789999998 77665443211 12244566665432 22222
Q ss_pred CCcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCcccccc
Q 037927 181 SRCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDKFSRV 258 (329)
Q Consensus 181 ~~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i 258 (329)
.....+.+|+.. +..+.... +... .....+.+ +|.+|+... . ...|..+|.. .+...+
T Consensus 80 --~~~~~v~~~d~~-g~~~~~~~-----~~~~------~~~~~i~~~~~g~l~v~~~-~----~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 80 --NGANKIGKLSKK-GGFTEYPL-----PQPD------SGPYGITEGLNGDIWFTQL-N----GDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp --TTTTEEEEECTT-SCEEEEEC-----SSTT------CCEEEEEECSTTCEEEEET-T----TTEEEEECTT-SCEEEE
T ss_pred --cCCCeEEEECCC-CCeEEecC-----CCCC------CCCccceECCCCCEEEEcc-C----CCeEEEECCC-CCEEEc
Confidence 012346667766 65554332 2111 01113333 577776543 2 3588999988 555555
Q ss_pred CCCCCCCCCceeEEEEE-CCcEEEEEc
Q 037927 259 PKPDFDYAHQAMGLGVV-GGRLCLLAL 284 (329)
Q Consensus 259 ~lP~~~~~~~~~~l~~~-~g~L~~~~~ 284 (329)
.+|.... ....++.. +|+|++...
T Consensus 140 ~~~~~~~--~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 140 DLPNKGS--YPAFITLGSDNALWFTEN 164 (300)
T ss_dssp ECSSTTC--CEEEEEECTTSSEEEEET
T ss_pred cCCCCCC--CceeEEECCCCCEEEEec
Confidence 5553221 12234432 577777665
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=21.55 E-value=3.8e+02 Score=22.87 Aligned_cols=52 Identities=13% Similarity=0.317 Sum_probs=32.1
Q ss_pred ceEEEEEECCCcccccc-CCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeee
Q 037927 242 MFGITAFDLATDKFSRV-PKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 242 ~~~i~~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~ 295 (329)
...|..+|+.+.+.... .++.... ....+... +|+..+... +..+.+|.+..
T Consensus 326 dg~i~v~~~~~~~~~~~~~~~~h~~--~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 326 DNNLSIWSYSSSGLTKQVDIPAHDT--RVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TCEEEEEEEETTEEEEEEEEECCSS--CCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCcEEEEecCCccceeEEEecCCCC--CEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 56888888887655433 3333222 12234433 677666666 88999999975
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=21.45 E-value=4e+02 Score=23.06 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=18.8
Q ss_pred eEEEccccccEEEEEcCCceEEEEcCccccee
Q 037927 100 VRFIGSCHGLICLALDNYREIFIWNPSTGAYT 131 (329)
Q Consensus 100 ~~~~~s~~Glll~~~~~~~~~~V~NP~T~~~~ 131 (329)
+..+...+.+|+.. ..+..+.|||..|++..
T Consensus 176 v~~l~~~~~~l~sg-~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 176 VLCLQYDERVIITG-SSDSTVRVWDVNTGEML 206 (435)
T ss_dssp EEEEECCSSEEEEE-ETTSCEEEEESSSCCEE
T ss_pred EEEEEECCCEEEEE-cCCCeEEEEECCCCcEE
Confidence 33344433333333 56778999999888764
No 100
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.44 E-value=2.8e+02 Score=23.33 Aligned_cols=71 Identities=14% Similarity=0.000 Sum_probs=40.1
Q ss_pred eeEE--CceeeEEeeccc-cCCceEEEEEECCCcc-ccccCCCCCCCCC--ceeEEEEE--CCcEEEEEc----CCEEEE
Q 037927 223 GTLV--NESLHWLTNNQC-EFGMFGITAFDLATDK-FSRVPKPDFDYAH--QAMGLGVV--GGRLCLLAL----GANVEL 290 (329)
Q Consensus 223 ~v~~--~G~lywl~~~~~-~~~~~~i~~fD~~~~~-~~~i~lP~~~~~~--~~~~l~~~--~g~L~~~~~----~~~l~v 290 (329)
++.+ +|.+|++.. .. ......|+.||+.+.+ ...+.+|...... ..-.+++. +|.+++... ...+.+
T Consensus 71 gv~~d~~g~L~v~D~-g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDN-GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEECSSSEEEEEEC-HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred EEEEcCCCcEEEEcC-CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 5666 488998765 20 0002589999999877 4556666432111 22345555 466777653 345555
Q ss_pred EEee
Q 037927 291 WVMK 294 (329)
Q Consensus 291 W~l~ 294 (329)
|.++
T Consensus 150 ~d~~ 153 (343)
T 2qe8_A 150 VDLQ 153 (343)
T ss_dssp EETT
T ss_pred EECC
Confidence 5543
No 101
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=21.23 E-value=3.6e+02 Score=22.48 Aligned_cols=146 Identities=8% Similarity=0.002 Sum_probs=74.9
Q ss_pred EEccccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCC
Q 037927 102 FIGSCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNS 181 (329)
Q Consensus 102 ~~~s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (329)
.++..+|.|-+.......+.++++-.+....+-... ....-++++|+..+ ++++.. .
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~P~~iavdp~~g--~ly~~d---------------~ 139 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHG--FMYWTD---------------W 139 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT------TCCEEEEEEETTTT--EEEEEE---------------C
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC------CCCcceEEeCCCCC--EEEEEc---------------c
Confidence 344445655555345667888888765544332211 11234677887654 222222 1
Q ss_pred CcccceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCcccccc
Q 037927 182 RCIDIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRV 258 (329)
Q Consensus 182 ~~~~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i 258 (329)
.....+++++.....=+.+.. . .. ..+.++.+ +|.+||... . ...|..+|+....-..+
T Consensus 140 -~~~~~I~~~~~dG~~~~~~~~----~--~~------~~P~gla~d~~~~~lY~~D~-~----~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 140 -GTPAKIKKGGLNGVDIYSLVT----E--NI------QWPNGITLDLLSGRLYWVDS-K----LHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -SSSCEEEEEETTSCCEEEEEC----S--SC------SCEEEEEEETTTTEEEEEET-T----TTEEEEEETTSCSCEEE
T ss_pred -CCCCeEEEEcCCCCCeEEEEE----C--CC------CCceEEEEeccCCEEEEEEC-C----CCeEEEEecCCCceEEE
Confidence 112456666654332222221 0 11 11224544 589999766 3 46899999986544333
Q ss_pred -CCCCCCCCCceeEEEEECCcEEEEEc-CCEEEE
Q 037927 259 -PKPDFDYAHQAMGLGVVGGRLCLLAL-GANVEL 290 (329)
Q Consensus 259 -~lP~~~~~~~~~~l~~~~g~L~~~~~-~~~l~v 290 (329)
..+.... .-..+++.+|.|++... ...+..
T Consensus 202 ~~~~~~~~--~P~giav~~~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 202 LEDEKRLA--HPFSLAVFEDKVFWTDIINEAIFS 233 (316)
T ss_dssp EECTTTTS--SEEEEEEETTEEEEEETTTTEEEE
T ss_pred eecCCccC--CcEEEEEECCEEEEEECCCCeEEE
Confidence 2221111 12356667888998886 444433
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=21.15 E-value=4.1e+02 Score=23.07 Aligned_cols=132 Identities=13% Similarity=0.036 Sum_probs=69.0
Q ss_pred cCCceEEEEcCcccceee-CCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEc
Q 037927 115 DNYREIFIWNPSTGAYTK-LPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTA 193 (329)
Q Consensus 115 ~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss 193 (329)
..+..+.+||..+++... +.... .....+.+++ .+ ++... ....+.+|+.
T Consensus 329 ~~dg~i~vwd~~~~~~~~~~~~h~-------~~v~~~~~~~---~~-l~s~s------------------~dg~v~vwd~ 379 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELMYTLQGHT-------ALVGLLRLSD---KF-LVSAA------------------ADGSIRGWDA 379 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECS---SE-EEEEE------------------TTSEEEEEET
T ss_pred eCCCcEEEEECCCCcEEEEEeCCC-------CcEEEEEEcC---CE-EEEEe------------------CCCcEEEEEC
Confidence 455678888888877543 32211 1123344442 22 33332 2446889998
Q ss_pred CCCceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEE
Q 037927 194 KTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLG 273 (329)
Q Consensus 194 ~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~ 273 (329)
.++.-..... ..... ....+..+|.+...+. ...|..+|+.+.+.....+..... ....+.
T Consensus 380 ~~~~~~~~~~----~~~~~-------~~~~~~~~~~~l~~~~------dg~i~iwd~~~g~~~~~~~~~~~~--~v~~v~ 440 (464)
T 3v7d_B 380 NDYSRKFSYH----HTNLS-------AITTFYVSDNILVSGS------ENQFNIYNLRSGKLVHANILKDAD--QIWSVN 440 (464)
T ss_dssp TTCCEEEEEE----CTTCC-------CEEEEEECSSEEEEEE------TTEEEEEETTTCCEEESCTTTTCS--EEEEEE
T ss_pred CCCceeeeec----CCCCc-------cEEEEEeCCCEEEEec------CCeEEEEECCCCcEEehhhccCCC--cEEEEE
Confidence 8764221111 11111 1114455676555555 568999999988765432222211 233444
Q ss_pred EECCcEEEEEc-CCEEEEEEee
Q 037927 274 VVGGRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 274 ~~~g~L~~~~~-~~~l~vW~l~ 294 (329)
..++.|.+... +....+|.++
T Consensus 441 ~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 441 FKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EETTEEEEEEEETTEEEEEEEE
T ss_pred ecCCEEEEEEEeCCeEEEEEee
Confidence 45555655555 7777778776
No 103
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=21.08 E-value=3.8e+02 Score=25.22 Aligned_cols=53 Identities=11% Similarity=-0.089 Sum_probs=35.3
Q ss_pred eEECceeeEEeeccccCCceEEEEEECCCccc-cccCCCCCCCCCceeEEEEECCcEEEEEc
Q 037927 224 TLVNESLHWLTNNQCEFGMFGITAFDLATDKF-SRVPKPDFDYAHQAMGLGVVGGRLCLLAL 284 (329)
Q Consensus 224 v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~g~L~~~~~ 284 (329)
+..+|.+|.-+. ...|.+||.++.+- ...++|..... .+..-+.+|++|++..
T Consensus 481 ~tagg~vf~gt~------dg~l~A~D~~tG~~lW~~~l~~g~~~--~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 481 ATAGDLVFYGTL------DGYLKARDSDTGDLLWKFKIPSGAIG--YPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EETTTEEEEECT------TSEEEEEETTTCCEEEEEECSSCCCS--CCEEEEETTEEEEEEE
T ss_pred EecCCEEEEECC------CCeEEEEECCCCCEEEEeeCCCCcEe--ccEEEEeCCEEEEEEE
Confidence 345677777433 67999999987643 33478776543 2334457899888776
No 104
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=21.07 E-value=33 Score=18.23 Aligned_cols=22 Identities=32% Similarity=0.622 Sum_probs=15.0
Q ss_pred ccccccEEEEEcCCceEEEEcCcc
Q 037927 104 GSCHGLICLALDNYREIFIWNPST 127 (329)
Q Consensus 104 ~s~~Glll~~~~~~~~~~V~NP~T 127 (329)
++|.||-|.. ....|-||-|-|
T Consensus 15 dcceglecwk--rrrsfevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWK--RRRSFEVCVPKT 36 (37)
T ss_dssp CBCTTEEEEC--CSSSCCEEEECC
T ss_pred chhhhHHHHH--hccceeeecCCC
Confidence 5789999987 445555666654
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=20.96 E-value=2.1e+02 Score=23.29 Aligned_cols=57 Identities=14% Similarity=0.007 Sum_probs=35.2
Q ss_pred Cce-eeEEeeccccCCceEEEEEECCCccccccCCCCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEe
Q 037927 227 NES-LHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVM 293 (329)
Q Consensus 227 ~G~-lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l 293 (329)
+|. +||... . ...|..+|+.++ ...+..|... ...++.. +|+|++... ...+.+|..
T Consensus 38 ~g~~l~~~~~-~----~~~i~~~~~~~~-~~~~~~~~~~----~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 38 ARSAVIFSDV-R----QNRTWAWSDDGQ-LSPEMHPSHH----QNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp GGTEEEEEEG-G----GTEEEEEETTSC-EEEEESSCSS----EEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred CCCEEEEEeC-C----CCEEEEEECCCC-eEEEECCCCC----cceeeECCCCcEEEEecCCCeEEEEcC
Confidence 565 899877 4 468999999988 6555444321 2234433 577766665 455655544
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=20.86 E-value=3.7e+02 Score=22.45 Aligned_cols=151 Identities=10% Similarity=0.093 Sum_probs=70.9
Q ss_pred cccccEEEEEcCCceEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcc
Q 037927 105 SCHGLICLALDNYREIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCI 184 (329)
Q Consensus 105 s~~Glll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 184 (329)
+-+|-++.....+..+.|||..++.+.......... ......+.+.|.+ .+ ++... .
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g-~~-l~s~s------------------~ 81 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH---QRTVRKVAWSPCG-NY-LASAS------------------F 81 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC---SSCEEEEEECTTS-SE-EEEEE------------------T
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc---CCcEEEEEECCCC-CE-EEEEE------------------C
Confidence 445555544356778899998887653211111111 1223456666642 33 22222 2
Q ss_pred cceEEEEEcCCCceEEecccCcccccccccccccCCCceeEE--CceeeEEeeccccCCceEEEEEECCCcc-cccc-CC
Q 037927 185 DIQGIVFTAKTNSWKKVEHSFGSIHCCCEARNLQGRPMGTLV--NESLHWLTNNQCEFGMFGITAFDLATDK-FSRV-PK 260 (329)
Q Consensus 185 ~~~~~vyss~t~~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~i~~fD~~~~~-~~~i-~l 260 (329)
...+.+|+..++.+..+.. +.... ..- ..+.+ +|.....+. . +..|..+|+.++. ...+ .+
T Consensus 82 D~~v~iw~~~~~~~~~~~~----~~~h~-----~~v-~~v~~sp~~~~l~s~s-~----D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTT----LEGHE-----NEV-KSVAWAPSGNLLATCS-R----DKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp TSCEEEEEECCC-EEEEEE----ECCCS-----SCE-EEEEECTTSSEEEEEE-T----TSCEEEEEECTTSCEEEEEEE
T ss_pred CCcEEEEEccCCCeEEEEE----ccCCC-----CCc-eEEEEeCCCCEEEEEE-C----CCeEEEEECCCCCCeEEEEEe
Confidence 3456788877776654433 22111 000 02222 455444433 2 4577778876542 2222 11
Q ss_pred CCCCCCCceeEEEEE-CCcEEEEEc-CCEEEEEEeee
Q 037927 261 PDFDYAHQAMGLGVV-GGRLCLLAL-GANVELWVMKE 295 (329)
Q Consensus 261 P~~~~~~~~~~l~~~-~g~L~~~~~-~~~l~vW~l~~ 295 (329)
..... ....+... +|.+.+... ...+.+|.++.
T Consensus 147 ~~h~~--~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 147 NSHTQ--DVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCCS--CEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCcCC--CeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 11111 11223332 566555555 77888887763
No 107
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.54 E-value=3.7e+02 Score=22.32 Aligned_cols=143 Identities=11% Similarity=0.128 Sum_probs=73.1
Q ss_pred eEEEEcCcccceeeCCCCCCCCCCCCceeEEEEEeCCCCCEEEEEEEEeecccccccccCCCCCcccceEEEEEcCCC--
Q 037927 119 EIFIWNPSTGAYTKLPADPDATYDYDIVKYGFGYDSSTNGYKVMFYFQEIDHKREDNLQDDNSRCIDIQGIVFTAKTN-- 196 (329)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~~~~vyss~t~-- 196 (329)
.++++|+.|++....-... ......++++|+..+ +++.. .....+.+|+..+.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~-----~~~~p~gia~d~~g~---l~v~d-----------------~~~~~v~~~~~~g~~~ 124 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN-----LFYLPHGLSIDTDGN---YWVTD-----------------VALHQVFKLDPHSKEG 124 (329)
T ss_dssp CEEEECTTTCCEEEEECTT-----TCSSEEEEEECTTSC---EEEEE-----------------TTTTEEEEECTTCSSC
T ss_pred cEEEEECCCCeEEeccCCC-----ccCCceEEEECCCCC---EEEEE-----------------CCCCEEEEEeCCCCeE
Confidence 6999999998875422111 122355778886544 33222 12345677776544
Q ss_pred ceEEecccCcccccccccccccCCCceeEE---CceeeEEeeccccCCceEEEEEECCCccccccCCCCCC------CCC
Q 037927 197 SWKKVEHSFGSIHCCCEARNLQGRPMGTLV---NESLHWLTNNQCEFGMFGITAFDLATDKFSRVPKPDFD------YAH 267 (329)
Q Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~i~~fD~~~~~~~~i~lP~~~------~~~ 267 (329)
.=..+... ......... ...+.++.+ +|.+|+... .. ...|..||...+....+..+... ...
T Consensus 125 ~~~~~~~~---~~~g~~~~~-~~~P~~ia~~~~~g~lyv~d~-~~---~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~ 196 (329)
T 3fvz_A 125 PLLILGRS---MQPGSDQNH-FCQPTDVAVEPSTGAVFVSDG-YC---NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFS 196 (329)
T ss_dssp CSEEESBT---TBCCCSTTC-CSSEEEEEECTTTCCEEEEEC-SS---CCEEEEECTTSCEEEEECEECCSSSCCTTEES
T ss_pred EEEEeccc---CCCCCCccc-cCCCcEEEEeCCCCeEEEEeC-CC---CCeEEEEcCCCCEEEEeccCCCCCCCCCcccC
Confidence 11222210 000000000 112225555 578888763 11 46899999665544444222111 000
Q ss_pred ceeEEEEE-C-CcEEEEEc-CCEEEEEEee
Q 037927 268 QAMGLGVV-G-GRLCLLAL-GANVELWVMK 294 (329)
Q Consensus 268 ~~~~l~~~-~-g~L~~~~~-~~~l~vW~l~ 294 (329)
.-..++.. + |.|++... ...+.+|..+
T Consensus 197 ~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 12345554 4 88988888 7888888876
No 108
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=20.54 E-value=4e+02 Score=24.81 Aligned_cols=78 Identities=13% Similarity=-0.064 Sum_probs=46.6
Q ss_pred eEEEEEcCCC--ceEEecccCcccccccccccccCCCceeEECceeeEEeeccccCCceEEEEEECCCccc-cccCCCCC
Q 037927 187 QGIVFTAKTN--SWKKVEHSFGSIHCCCEARNLQGRPMGTLVNESLHWLTNNQCEFGMFGITAFDLATDKF-SRVPKPDF 263 (329)
Q Consensus 187 ~~~vyss~t~--~W~~~~~~~~~~p~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~~~-~~i~lP~~ 263 (329)
.+..++..++ .|+.... .|. .... .+..+|.+|.-+. ...+.+||.++.+- ..+++|..
T Consensus 467 ~l~A~D~~tG~~~W~~~~~----~~~-------~~g~-~~tagglvf~g~~------dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEH----LPL-------WAGV-LATAGNLVFTGTG------DGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp EEEEECTTTCCEEEEEEES----SCC-------CSCC-EEETTTEEEEECT------TSEEEEEETTTCCEEEEEECSSC
T ss_pred eEEEEECCCCCEEEEecCC----CCC-------cccc-eEeCCCEEEEECC------CCcEEEEECCCCCEEEEecCCCC
Confidence 4555666666 4776543 221 1111 3455777777433 67999999987643 34577765
Q ss_pred CCCCceeEEEEECCcEEEEEc
Q 037927 264 DYAHQAMGLGVVGGRLCLLAL 284 (329)
Q Consensus 264 ~~~~~~~~l~~~~g~L~~~~~ 284 (329)
... .+..-..+|++|++..
T Consensus 529 ~~a--~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 529 IVS--PPITWEQDGEQYLGVT 547 (582)
T ss_dssp CCS--CCEEEEETTEEEEEEE
T ss_pred ccc--CceEEEECCEEEEEEE
Confidence 542 2333357899988876
No 109
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=20.28 E-value=2.5e+02 Score=26.74 Aligned_cols=25 Identities=12% Similarity=0.009 Sum_probs=21.4
Q ss_pred eeEECceeeEEeeccccCCceEEEEEECCCc
Q 037927 223 GTLVNESLHWLTNNQCEFGMFGITAFDLATD 253 (329)
Q Consensus 223 ~v~~~G~lywl~~~~~~~~~~~i~~fD~~~~ 253 (329)
+++.+|.+|.... ...+.++|.++.
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG 86 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASG 86 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTC
T ss_pred CEEECCEEEEECC------CCeEEEEECCCC
Confidence 7889999999877 679999998764
Done!