Query         037938
Match_columns 402
No_of_seqs    130 out of 1195
Neff          9.0 
Searched_HMMs 29240
Date          Mon Mar 25 09:37:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037938hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4g22_A Hydroxycinnamoyl-COA sh 100.0   9E-78 3.1E-82  598.4  38.4  379    1-402     3-394 (439)
  2 2xr7_A Malonyltransferase; xen 100.0 3.1E-68 1.1E-72  532.3  28.0  380    6-402     2-402 (453)
  3 2bgh_A Vinorine synthase; VS,  100.0 6.5E-68 2.2E-72  524.7  28.6  355    2-402     1-370 (421)
  4 2e1v_A Acyl transferase; BAHD  100.0 3.4E-67 1.2E-71  524.8  26.1  381    1-402     1-404 (454)
  5 2rkv_A Trichothecene 3-O-acety 100.0   4E-60 1.4E-64  473.5  29.6  360   24-402     4-399 (451)
  6 1q9j_A PAPA5, polyketide synth  99.2 4.2E-09 1.5E-13  102.9  25.3  291   22-354     5-313 (422)
  7 4hvm_A Tlmii; PSI-biology, mid  98.8 1.5E-07 5.1E-12   94.1  16.7  290   22-354    11-327 (493)
  8 2jgp_A Tyrocidine synthetase 3  98.7 3.1E-06 1.1E-10   85.0  22.9  283   22-354    94-400 (520)
  9 1l5a_A Amide synthase, VIBH; n  98.6 1.7E-06   6E-11   84.7  17.9  257   55-354    32-304 (436)
 10 2xhg_A Tyrocidine synthetase A  98.5 1.6E-05 5.4E-10   78.5  23.7  293   22-356    15-337 (466)
 11 2vsq_A Surfactin synthetase su  98.3 3.8E-06 1.3E-10   93.7  14.5  268   55-354    46-327 (1304)
 12 3fot_A 15-O-acetyltransferase;  98.0  0.0012 4.2E-08   65.9  23.4  279   54-354    71-399 (519)
 13 3cla_A Type III chloramphenico  73.1     2.8 9.6E-05   36.3   3.8   44  138-181   164-209 (213)
 14 2i9d_A Chloramphenicol acetylt  72.2       3  0.0001   36.2   3.8   44  137-180   171-216 (217)
 15 1dpb_A Dihydrolipoyl-transacet  71.8       4 0.00014   36.1   4.6   30  153-182   208-237 (243)
 16 1q23_A Chloramphenicol acetylt  71.4     3.2 0.00011   36.0   3.8   45  138-182   168-214 (219)
 17 3rqc_A Probable lipoamide acyl  67.5     3.7 0.00013   35.8   3.4   30  153-182   187-216 (224)
 18 1scz_A E2, dihydrolipoamide su  67.5     4.3 0.00015   35.6   3.8   30  153-182   196-225 (233)
 19 3b8k_A PDCE2;, dihydrolipoylly  67.4     3.9 0.00013   36.0   3.6   30  153-182   204-233 (239)
 20 2ii3_A Lipoamide acyltransfera  66.0     4.7 0.00016   36.0   3.8   30  153-182   224-253 (262)
 21 3mae_A 2-oxoisovalerate dehydr  60.4       7 0.00024   34.8   3.8   30  153-182   210-239 (256)
 22 3l60_A Branched-chain alpha-ke  58.8     7.7 0.00026   34.4   3.8   30  153-182   205-234 (250)
 23 1x93_A Hypothetical protein HP  47.4      51  0.0017   20.8   5.2   23  245-267     3-25  (55)
 24 4hhu_A OR280; engineered prote  41.0      16 0.00056   27.8   2.5   46   41-94     84-129 (170)
 25 2xl1_A Arginine attenuator pep  38.4      22 0.00076   18.5   2.0   19  271-289     6-24  (26)
 26 2kl8_A OR15; structural genomi  37.6      22 0.00074   23.9   2.4   38   56-94     10-47  (85)
 27 4hhu_A OR280; engineered prote  37.4      16 0.00056   27.8   2.0   45   42-94      4-48  (170)
 28 3dva_I Dihydrolipoyllysine-res  37.0     7.2 0.00025   37.6   0.0   30  153-182   391-420 (428)
 29 2k1o_A Putative; repressor, tr  27.7 1.3E+02  0.0045   19.7   6.1   27  241-267    13-39  (66)

No 1  
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00  E-value=9e-78  Score=598.45  Aligned_cols=379  Identities=27%  Similarity=0.507  Sum_probs=318.9

Q ss_pred             CCCcceEEeeceEeeCCCCCCCCeeeCCcccccccccccceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeE
Q 037938            1 MAASPLHGKEATVIYPSEPTPSTVLSLSALDSQLFLRFTIEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVR   80 (402)
Q Consensus         1 ~~~~~v~~~~~~~V~P~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~   80 (402)
                      |++++|+|.++++|+|+.|+|.+.++||+||+++ ++.|++.+|||+.++. +....+++||+||+++|++||+|||||+
T Consensus         3 m~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~   80 (439)
T 4g22_A            3 MGSMKIEVKESTMVRPAQETPGRNLWNSNVDLVV-PNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLK   80 (439)
T ss_dssp             ---CCEEEEEEEEECCSSCCCCCEECCCHHHHSC-CTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEE
T ss_pred             CCceEEEEeeeEEEeCCCCCCCCeecCChhHhCc-cccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeee
Confidence            7889999999999999999999999999999986 6899999999986533 2345689999999999999999999999


Q ss_pred             ecCCCCceeEEEeCCCCeEEEEEeecCCCccccccCcCchHHHhcccc-cccccccCCCCceEEEEEEeecCcEEEeeee
Q 037938           81 AKQEGSGLLEVVCLGQGAVFIEAVDRESTIDDFERAPRYVTQWRKLLS-LYVADVLKGVPPLVVQLTWLRDGAAALGIGF  159 (402)
Q Consensus        81 ~~~~~~g~~~i~~~~~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l~p-~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~  159 (402)
                      .+++  |+++|+|+++||.|++++ ++.+++|++... |...+++|+| .+...+..+.|++.+|||+|+|||++||+++
T Consensus        81 ~~~~--g~~~i~c~~~Gv~fv~A~-~d~~l~~l~~~~-p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~  156 (439)
T 4g22_A           81 RDED--GRIEIECNGEGVLFVEAE-SDGVVDDFGDFA-PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGM  156 (439)
T ss_dssp             ECTT--SCEEEECCCCCEEEEEEE-ESSCGGGGTTCC-CCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred             eCCC--CCEEEEECCCCCEEEEEE-cCCcHHHhcCCC-CCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEe
Confidence            8875  499999999999999999 999999997432 4446778875 3332334578999999999999999999999


Q ss_pred             eecccchhhHHHHHHHHHHHhccCCcCCCCCCCCCCCcccCcCCCCCCCccccccccccccCCccccccccccCCccc--
Q 037938          160 NHCVCDGIGSAEFLNLFTELSTSRHNELGGGHSLPKPVWDRHLMNSSSSRQQHAHTRASSVSHLEFNRVADLCGFVSR--  237 (402)
Q Consensus       160 ~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  237 (402)
                      ||.++||.|+.+|+++||++|||..       ...+|++||++++.++||       ...++|.+|...++..+....  
T Consensus       157 ~H~v~Dg~~~~~Fl~~wa~~~rg~~-------~~~~P~~dr~~l~~~~pp-------~~~~~~~~~~~~~~~~~~~~~~~  222 (439)
T 4g22_A          157 RHHAADGFSGLHFINSWSDMARGLD-------VTLPPFIDRTLLRARDPP-------QPQFQHIEYQPPPALAVSPQTAA  222 (439)
T ss_dssp             CTTTCCHHHHHHHHHHHHHHHTTCC-------CSSCCBCCGGGGCCCSSC-------CCSSCCGGGSCCC----------
T ss_pred             eeccCcHHHHHHHHHHHHHHhCCCC-------CCCCCccccccccCCCCC-------CCCcCcccccCCCCCcccccccc
Confidence            9999999999999999999999863       246789999999888777       445567777654433221100  


Q ss_pred             CCC-CCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCcccEEEEEEeecCCCCCCCCC
Q 037938          238 FSN-ERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNLPSNQILKLLFSINVRNRVKPSLP  316 (402)
Q Consensus       238 ~~~-~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp  316 (402)
                      ... .+++.++|+|++++|++||+.+.++..  ..++|++|+|+||+|+|++|||++++++.+.+.++||+|+|++||+|
T Consensus       223 ~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~--~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp  300 (439)
T 4g22_A          223 SDSVPETAVSIFKLTREQISALKAKSKEDGN--TISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLP  300 (439)
T ss_dssp             -----CEEEEEEEECHHHHHHHHHGGGGGGC--CCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCC
T ss_pred             cCCcccceEEEEEECHHHHHHHHHHhhccCC--CCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCC
Confidence            112 568999999999999999999987542  25899999999999999999999888899999999999999999999


Q ss_pred             CCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHhCCHHHHHHHHHHhhh-ccCC-------CCC-CCcEEEeecCC
Q 037938          317 SGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKERVDSEYVKSVIDSVSQ-TRAC-------PDS-VGVLIVSQWSR  387 (402)
Q Consensus       317 ~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~~~~~~~~~~~-~~~~-------p~~-~~~~~~ssw~~  387 (402)
                      ++||||++..+.+.++++||.+.+|+++|..||+++++++++++++.++|+ + .+..       +.+ ..++.+|||.+
T Consensus       301 ~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vssw~r  379 (439)
T 4g22_A          301 PGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYL-ELQPDLKALVRGAHTFKCPNLGITSWVR  379 (439)
T ss_dssp             TTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHH-HTCSCSTTCCCCHHHHCTTCEEEEECTT
T ss_pred             CCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHH-HhCccchhhcccCCcCcCCcEEEeecCc
Confidence            999999999999999999999999999999999999999999999999999 5 3211       111 46899999999


Q ss_pred             CCCCcccccCCccCC
Q 037938          388 LGLERVDFGMGRPTQ  402 (402)
Q Consensus       388 ~~~~~~DFG~G~P~~  402 (402)
                      |++|++|||||+|+|
T Consensus       380 ~~~y~~DFGwGkP~~  394 (439)
T 4g22_A          380 LPIHDADFGWGRPIF  394 (439)
T ss_dssp             SCTTCCCCSSCCCSE
T ss_pred             CCccccccCCCCcce
Confidence            999999999999975


No 2  
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00  E-value=3.1e-68  Score=532.31  Aligned_cols=380  Identities=22%  Similarity=0.308  Sum_probs=297.4

Q ss_pred             eEEeeceEeeCCCC-CCCCeeeCCcccccccccccceEEEEecCCCCCC--ChhHHHHHHHHHHhcccccCCCCceeEec
Q 037938            6 LHGKEATVIYPSEP-TPSTVLSLSALDSQLFLRFTIEYLLVYRPRPGLD--SLATVARVKSALAKALVPYYPLAGRVRAK   82 (402)
Q Consensus         6 v~~~~~~~V~P~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~~~   82 (402)
                      |+|+++++|+|+.+ ++.+.++||+||+......|++.+|||+.++..+  ....++.||+||+++|++||+|||||+.+
T Consensus         2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~   81 (453)
T 2xr7_A            2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP   81 (453)
T ss_dssp             CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred             eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence            89999999999987 5568999999999854445899999998653221  23568999999999999999999999987


Q ss_pred             CCCCceeEEEeC-CCCeEEEEEeecCCCccccc-cCcCchHHHhcccccccccc----cCCCCceEEEEEEeecCcEEEe
Q 037938           83 QEGSGLLEVVCL-GQGAVFIEAVDRESTIDDFE-RAPRYVTQWRKLLSLYVADV----LKGVPPLVVQLTWLRDGAAALG  156 (402)
Q Consensus        83 ~~~~g~~~i~~~-~~gv~f~~~~~~~~~l~~l~-~~~~p~~~~~~l~p~~~~~~----~~~~P~l~vqvt~f~~GG~~l~  156 (402)
                      ++.+|+++|+|+ ++||.|++++ ++.+++++. ....|...++.|+|......    ..+.|++.+|||+|.|||++||
T Consensus        82 ~~~~g~~~i~c~~~~gv~fv~A~-~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg  160 (453)
T 2xr7_A           82 QDWSGYPELRYVTGNSVSVIFSE-SDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIG  160 (453)
T ss_dssp             SSTTCCCEEEEETTCCCEEEEEE-CCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEE
T ss_pred             CCCCCCEEEEecCCCceEEEEEe-cCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEE
Confidence            621359999999 5999999999 999999985 22234445677775322111    1228999999999999999999


Q ss_pred             eeeeecccchhhHHHHHHHHHHHhc-cCCcCCCCCCCCCCCcccCcCCCCCCCccccccccccccCC-ccccccccccCC
Q 037938          157 IGFNHCVCDGIGSAEFLNLFTELST-SRHNELGGGHSLPKPVWDRHLMNSSSSRQQHAHTRASSVSH-LEFNRVADLCGF  234 (402)
Q Consensus       157 ~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~~~~~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (402)
                      +++||+++||.|+.+|+++||++|| |....  ..+....|++||+.+..  |+       .....+ ..+...+.....
T Consensus       161 ~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~--~~~~~~~P~~dr~~l~~--p~-------~~~~~~~~~~~~~~~~~~~  229 (453)
T 2xr7_A          161 FTNHHVAGDGATIVKFVRAWALLNKFGGDEQ--FLANEFIPFYDRSVIKD--PN-------GVGMSIWNEMKKYKHMMKM  229 (453)
T ss_dssp             EEECTTTCCSHHHHHHHHHHHHHHHTTTCGG--GSCGGGSCBCCCSSSCC--SS-------CHHHHTTTTGGGCTTTSCC
T ss_pred             EeeeeeeechhHHHHHHHHHHHHhhcCCCcc--cCCCCCCCccccccccC--CC-------CcchHHHHhccccCCcccc
Confidence            9999999999999999999999999 75210  01233468899988763  33       110001 111110111000


Q ss_pred             cccCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCC-----CCcccEEEEEEeecCC
Q 037938          235 VSRFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNL-----PSNQILKLLFSINVRN  309 (402)
Q Consensus       235 ~~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~-----~~~~~~~l~~~vd~R~  309 (402)
                      .......+.+.++|+|++++|++||+.+.++... ..++|++|+|+|++|+|+++||..     ++++.+.+.++||+|+
T Consensus       230 ~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~-~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~  308 (453)
T 2xr7_A          230 SDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPK-LTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRA  308 (453)
T ss_dssp             SCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCC-CSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTS
T ss_pred             ccccCCCCceEEEEEECHHHHHHHHHHHhhcCCC-CCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccc
Confidence            0001234577899999999999999999875421 258999999999999999999975     6778999999999999


Q ss_pred             CCCCCCCCCcccceeeeeeeccchhHhhh-chHHHHHHHHHHHHHh--CCHH-HHHHHHHHhhh-ccCCCCCCCcEEEee
Q 037938          310 RVKPSLPSGYYGNAFVLGCAQTRVKDLTE-KGLGHAAMLVKKAKER--VDSE-YVKSVIDSVSQ-TRACPDSVGVLIVSQ  384 (402)
Q Consensus       310 rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~iR~ai~~--~~~~-~~~~~~~~~~~-~~~~p~~~~~~~~ss  384 (402)
                      |++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+  .+++ ++++  +|+ + .+... ....+.+||
T Consensus       309 rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~-~~~~~~~-~~~~~~vss  384 (453)
T 2xr7_A          309 QFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWF-KEYDKVD-AKRSLSVAG  384 (453)
T ss_dssp             CSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTT-SCCCCSC-GGGEEEECS
T ss_pred             cCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHH-HHHHhhc-cCCcEEEec
Confidence            99999999999999999999999999994 8999999999999999  5788 8888  888 5 33321 135899999


Q ss_pred             cCCCCCCcccccCCccCC
Q 037938          385 WSRLGLERVDFGMGRPTQ  402 (402)
Q Consensus       385 w~~~~~~~~DFG~G~P~~  402 (402)
                      |.+|++|++|||||+|+|
T Consensus       385 w~~~~~y~~DFG~G~P~~  402 (453)
T 2xr7_A          385 SPKLDLYAADFGWGRPEK  402 (453)
T ss_dssp             CSSCCGGGCCCSSCSCSE
T ss_pred             cccCCccccccCCCcceE
Confidence            999999999999999975


No 3  
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00  E-value=6.5e-68  Score=524.71  Aligned_cols=355  Identities=24%  Similarity=0.400  Sum_probs=289.5

Q ss_pred             CCcceEEeeceEeeCCCCCCC--CeeeCCcccccccccccceEEEEecCCCCC--CChhHHHHHHHHHHhcccccCCCCc
Q 037938            2 AASPLHGKEATVIYPSEPTPS--TVLSLSALDSQLFLRFTIEYLLVYRPRPGL--DSLATVARVKSALAKALVPYYPLAG   77 (402)
Q Consensus         2 ~~~~v~~~~~~~V~P~~~~~~--~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~LaG   77 (402)
                      |+|+|++.++++|+|+.|+|.  +.++||.||++. ++.|++.+|||+.++..  +....++.||+||+++|++||+|||
T Consensus         1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAG   79 (421)
T 2bgh_A            1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLL-LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAG   79 (421)
T ss_dssp             ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTS-CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGS
T ss_pred             CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcc-cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhcc
Confidence            468999999999999998874  489999999985 57899999999975431  2457899999999999999999999


Q ss_pred             eeEecCCCCceeEEEeCCCCeEEEEEeecCCCccccccC-cCchHHHhcccccccccc----cCCCCceEEEEEEeecCc
Q 037938           78 RVRAKQEGSGLLEVVCLGQGAVFIEAVDRESTIDDFERA-PRYVTQWRKLLSLYVADV----LKGVPPLVVQLTWLRDGA  152 (402)
Q Consensus        78 rl~~~~~~~g~~~i~~~~~gv~f~~~~~~~~~l~~l~~~-~~p~~~~~~l~p~~~~~~----~~~~P~l~vqvt~f~~GG  152 (402)
                      ||+.      +++|+|+++||.|++++ ++.+++++... + +...++.|+|......    ..+.|++.+|||+|.|||
T Consensus        80 Rl~~------~~~i~c~~~Gv~fv~A~-~d~~l~~~~~~~p-~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG  151 (421)
T 2bgh_A           80 RINV------NSSVDCNDSGVPFVEAR-VQAQLSQAIQNVV-ELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGG  151 (421)
T ss_dssp             EEET------TTEEECCCCCEEEEEEE-ESSCHHHHHSCCS-SGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSC
T ss_pred             ccCC------CcEEEEcCCceEEEEEE-EcCCHHHHhccCC-ChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCC
Confidence            9962      58999999999999999 99999988632 2 2235677776442211    456899999999999999


Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhccCCcCCCCCCCCCCCcccC-cCCCC--CCCccccccccccccCCccccccc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTSRHNELGGGHSLPKPVWDR-HLMNS--SSSRQQHAHTRASSVSHLEFNRVA  229 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~dr-~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~  229 (402)
                      ++||+++||.++||.|+.+|+++||++|||..      .. ..|.+|| +.+.+  +++|       .     +.     
T Consensus       152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~------~~-~~P~~dr~~~l~p~~~~~~-------~-----~~-----  207 (421)
T 2bgh_A          152 TAIGVNLSHKIADVLSLATFLNAWTATCRGET------EI-VLPNFDLAARHFPPVDNTP-------S-----PE-----  207 (421)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHTTCS------CC-CCCBCSHHHHHSCCCTTCC-------C-----CC-----
T ss_pred             EEEEEEeeEEechHHHHHHHHHHHHHHhcCCC------CC-CCCccccccccCCCcccCC-------C-----Cc-----
Confidence            99999999999999999999999999999863      22 5688998 65432  1221       1     00     


Q ss_pred             cccCCcccCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCC--CCcccEEEEEEeec
Q 037938          230 DLCGFVSRFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNL--PSNQILKLLFSINV  307 (402)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~--~~~~~~~l~~~vd~  307 (402)
                           +  ....+++.++|+|++++|++||+.+.++..  ..++|++|+|+|++|+|+++||..  ++++.+.+.++||+
T Consensus       208 -----~--~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~  278 (421)
T 2bgh_A          208 -----L--VPDENVVMKRFVFDKEKIGALRAQASSASE--EKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNL  278 (421)
T ss_dssp             -----C--CCCSSEEEEEEEECHHHHHHHHHHTC-------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEES
T ss_pred             -----c--CCccceEEEEEEECHHHHHHHHHHhhccCC--CCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecC
Confidence                 0  123568899999999999999999976543  258999999999999999999864  35678999999999


Q ss_pred             CCCCCCCCCCCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHhCCHHHHHHHHHHhhh-ccCCCCCCCcEEEeecC
Q 037938          308 RNRVKPSLPSGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKERVDSEYVKSVIDSVSQ-TRACPDSVGVLIVSQWS  386 (402)
Q Consensus       308 R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~ssw~  386 (402)
                      |+|++||+|++||||++..+.+..++++  +.+|+++|..||+++.++++++++.+.++. + ....+. ...+.+|||.
T Consensus       279 R~rl~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~vssw~  354 (421)
T 2bgh_A          279 RSRMNPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGM-TCLYELEP-QELLSFTSWC  354 (421)
T ss_dssp             GGGSSSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHH-HHHHTSCG-GGEEEEEEET
T ss_pred             ccccCCCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCC-CCeEEEeccc
Confidence            9999999999999999999988888776  789999999999999999999999888776 4 222121 3569999999


Q ss_pred             CCCCCcccccCCccCC
Q 037938          387 RLGLERVDFGMGRPTQ  402 (402)
Q Consensus       387 ~~~~~~~DFG~G~P~~  402 (402)
                      ++++|++|||||+|+|
T Consensus       355 ~~~~y~~DFGwGkP~~  370 (421)
T 2bgh_A          355 RLGFYDLDFGWGKPLS  370 (421)
T ss_dssp             TSCGGGCCSSSCCCSE
T ss_pred             cCCCcccccCCCccCe
Confidence            9999999999999975


No 4  
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00  E-value=3.4e-67  Score=524.76  Aligned_cols=381  Identities=20%  Similarity=0.289  Sum_probs=288.5

Q ss_pred             CCC-cceEEeeceEeeCCCC-CCCCeeeCCcccccccccccceEEEEecCCCCCC--ChhHHHHHHHHHHhcccccCCCC
Q 037938            1 MAA-SPLHGKEATVIYPSEP-TPSTVLSLSALDSQLFLRFTIEYLLVYRPRPGLD--SLATVARVKSALAKALVPYYPLA   76 (402)
Q Consensus         1 ~~~-~~v~~~~~~~V~P~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~La   76 (402)
                      |++ .+|+|+++++|+|+.+ ++.+.++||+||+.+....|++.+|||+.++..+  ....+++||+||+++|++||+||
T Consensus         1 ~~~~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA   80 (454)
T 2e1v_A            1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFV   80 (454)
T ss_dssp             -----CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGG
T ss_pred             CCCCceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccc
Confidence            454 6999999999999987 5578999999999854445899999998653211  22468999999999999999999


Q ss_pred             ceeE-ecCCCCceeEEEeC-CCCeEEEEEeecCCCcccccc-CcCchHHHhccccc-cccc---ccCCCCceEEEEEEee
Q 037938           77 GRVR-AKQEGSGLLEVVCL-GQGAVFIEAVDRESTIDDFER-APRYVTQWRKLLSL-YVAD---VLKGVPPLVVQLTWLR  149 (402)
Q Consensus        77 Grl~-~~~~~~g~~~i~~~-~~gv~f~~~~~~~~~l~~l~~-~~~p~~~~~~l~p~-~~~~---~~~~~P~l~vqvt~f~  149 (402)
                      |||+ .+++ +|+++|+|+ ++||.|++++ ++.+++++.. ...|...++.|+|. +...   +..+.|++.+|||+|+
T Consensus        81 GRl~~~~~~-~g~~~i~c~~~~gv~fv~A~-~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~  158 (454)
T 2e1v_A           81 GKLVVYPAP-TKKPEICYVEGDSVAVTFAE-CNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFP  158 (454)
T ss_dssp             SEEEECSSS-SSCCEEEECTTCCEEEEEEE-ECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEET
T ss_pred             eeeeeccCC-CCCEEEEECCCCcEEEEEEE-eCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEec
Confidence            9998 5532 359999999 5999999999 9999999852 22244456777753 2111   1134599999999999


Q ss_pred             cCcEEEeeeeeecccchhhHHHHHHHHHHHhc-cCC-cCCCCCCCCCCCcccCcCCCCCCCccccccccccccCCccccc
Q 037938          150 DGAAALGIGFNHCVCDGIGSAEFLNLFTELST-SRH-NELGGGHSLPKPVWDRHLMNSSSSRQQHAHTRASSVSHLEFNR  227 (402)
Q Consensus       150 ~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-~~~~~~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~  227 (402)
                      |||++||+++||.++||.|+.+|+++||++|| |.. ...  .++...|++|| .+.  +|+ .+..  ..    ..|..
T Consensus       159 cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~--~~~~~~P~~dr-~l~--~p~-~~~~--~~----~~~~~  226 (454)
T 2e1v_A          159 NQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESF--LANGTRPLYDR-IIK--YPM-LDEA--YL----KRAKV  226 (454)
T ss_dssp             TTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHH--HHHSCCCBCCC-CCC--CHH-HHHH--HH----HHTTC
T ss_pred             CCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCcccc--CCCCCCCcccc-cCC--CCC-cchH--HH----Hhhhc
Confidence            99999999999999999999999999999999 652 000  01235688999 764  233 1100  00    01100


Q ss_pred             ccc---ccCCcccCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCcccEEEEEE
Q 037938          228 VAD---LCGFVSRFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNLPSNQILKLLFS  304 (402)
Q Consensus       228 ~~~---~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~~~~~~~~l~~~  304 (402)
                      ...   ...... ....+.+.++|+|++++|++||+.+.++... ..++|++|+|+|++|+|+++||   +++.+.+.++
T Consensus       227 ~~~~~~~~~~~~-~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~-~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~  301 (454)
T 2e1v_A          227 ESFNEDYVTQSL-AGPSDKLRATFILTRAVINQLKDRVLAQLPT-LEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFP  301 (454)
T ss_dssp             TTHHHHCCCCCC-CCCCCEEEEEEEECHHHHHHHHHHHHHHCTT-CSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEE
T ss_pred             cccccccCcccC-CCCCCceEEEEEECHHHHHHHHHHHhhcCCC-CCcccHHHHHHHHHHHHHhhhc---CCCceEEEEE
Confidence            000   000000 0234678999999999999999999875421 2589999999999999999999   6789999999


Q ss_pred             eecCCCCCCCCCCCcccceeeeeeeccchhHhhh-chHHHHHHHHHHHHHhCCHHH----HHH-HHHHhhh-ccCCCCCC
Q 037938          305 INVRNRVKPSLPSGYYGNAFVLGCAQTRVKDLTE-KGLGHAAMLVKKAKERVDSEY----VKS-VIDSVSQ-TRACPDSV  377 (402)
Q Consensus       305 vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~iR~ai~~~~~~~----~~~-~~~~~~~-~~~~p~~~  377 (402)
                      ||+|+|++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+++++|    +++ ..+|+ + .+.... .
T Consensus       302 vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~  379 (454)
T 2e1v_A          302 IDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFN-DLVSEGMP-T  379 (454)
T ss_dssp             EECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----C-HHHHHCCC-S
T ss_pred             ecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH-HHHHhhcC-C
Confidence            9999999999999999999999999999999995 899999999999999987444    444 55566 4 222211 3


Q ss_pred             CcEEEeecCCCCCCcccccCCccCC
Q 037938          378 GVLIVSQWSRLGLERVDFGMGRPTQ  402 (402)
Q Consensus       378 ~~~~~ssw~~~~~~~~DFG~G~P~~  402 (402)
                      ..+.+|||.+|++|++|||||+|+|
T Consensus       380 ~~~~vssw~~~~~y~~DFG~G~P~~  404 (454)
T 2e1v_A          380 TMTWVSGTPKLRFYDMDFGWGKPKK  404 (454)
T ss_dssp             EEEEEECCTTSCGGGCCSSSCSCSE
T ss_pred             ceEEEecCCCCCcccccccCccceE
Confidence            4899999999999999999999975


No 5  
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00  E-value=4e-60  Score=473.53  Aligned_cols=360  Identities=16%  Similarity=0.225  Sum_probs=274.1

Q ss_pred             eeeCCccccccc-ccccceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCC---CCceeEEEeCCCCeE
Q 037938           24 VLSLSALDSQLF-LRFTIEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQE---GSGLLEVVCLGQGAV   99 (402)
Q Consensus        24 ~~~LS~lD~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~---~~g~~~i~~~~~gv~   99 (402)
                      .++||.|||+.+ ++.|++.+|||+.++..+....++.||+||+++|++||+|||||+.++.   .+|+++|.|+++++.
T Consensus         4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~   83 (451)
T 2rkv_A            4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR   83 (451)
T ss_dssp             CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred             cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence            469999999852 4789999999986432123567899999999999999999999988752   246999998776667


Q ss_pred             EEEEeecCC-----CccccccCcCchHHHh--cccc---cccc--c-ccCCCCceEEEEEEeecCcEEEeeeeeecccch
Q 037938          100 FIEAVDRES-----TIDDFERAPRYVTQWR--KLLS---LYVA--D-VLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDG  166 (402)
Q Consensus       100 f~~~~~~~~-----~l~~l~~~~~p~~~~~--~l~p---~~~~--~-~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg  166 (402)
                      |++++ ++.     ++++++...+|...++  .+.|   .|..  . ...+.|++.+||| |.|||++||+++||+++||
T Consensus        84 ~~va~-~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg  161 (451)
T 2rkv_A           84 VVVKD-LRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDM  161 (451)
T ss_dssp             EEEEE-CTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCH
T ss_pred             EEEEe-CCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccH
Confidence            99888 654     5666652223432332  1324   2221  1 2345899999999 7799999999999999999


Q ss_pred             hhHHHHHHHHHHHhccCCcCCCCCCC--CCCCcccCcCCCC---CCCccccccccccccCCccccccccccCCcccCCCC
Q 037938          167 IGSAEFLNLFTELSTSRHNELGGGHS--LPKPVWDRHLMNS---SSSRQQHAHTRASSVSHLEFNRVADLCGFVSRFSNE  241 (402)
Q Consensus       167 ~g~~~fl~~wa~~~rg~~~~~~~~~~--~~~P~~dr~~l~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (402)
                      .|+.+|+++||++|||...     +.  ...|++||+.+.+   +.+|       .....+.+|...+....  ......
T Consensus       162 ~g~~~Fl~awa~~~rg~~~-----~~~~~~~p~~dr~~~~p~~~~~~p-------~~~~~~~~~~~~~~~~~--~~~~~~  227 (451)
T 2rkv_A          162 VGQDAVIRLLSKACRNDPF-----TEEEMTAMNLDRKTIVPYLENYTI-------GPEVDHQIVKADVAGGD--AVLTPV  227 (451)
T ss_dssp             HHHHHHHHHHHHHHHTCCC-----CHHHHHHTTCCSTTSSCCCTTCCC-------CGGGTTCBCCTTSCC---------C
T ss_pred             HHHHHHHHHHHHHhcCCCC-----CccccccccCchhhccccccccCC-------CccccccccCCCCCCCC--CCCCCC
Confidence            9999999999999998631     10  1247888874432   1233       22333444432211100  011235


Q ss_pred             CceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHc-C-CCCcccEEEEEEeecCCCCCCCCCCCc
Q 037938          242 RLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSL-N-LPSNQILKLLFSINVRNRVKPSLPSGY  319 (402)
Q Consensus       242 ~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~vd~R~rl~p~lp~~Y  319 (402)
                      +++.++|+|++++|++||+.+.++...+..++|++|+|+|++|+|+++|| . .++++.+.+.++||+|+|++  +|.+|
T Consensus       228 ~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y  305 (451)
T 2rkv_A          228 SASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNY  305 (451)
T ss_dssp             CEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTC
T ss_pred             CceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCC
Confidence            67899999999999999999987642113589999999999999999998 3 56788999999999999997  88999


Q ss_pred             ccceeeeeeeccchhHhhhchHHHHHHHHHHHHHhCCHHH-HHHHHHHhhh-ccCCC--------CCCCcEEEeecCCCC
Q 037938          320 YGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKERVDSEY-VKSVIDSVSQ-TRACP--------DSVGVLIVSQWSRLG  389 (402)
Q Consensus       320 ~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~-~~~~~~~~~~-~~~~p--------~~~~~~~~ssw~~~~  389 (402)
                      |||++..+.+.++++||.+.+|+++|..||+++.+++.++ +++.++|+ + .+...        ..+.++.+|||++++
T Consensus       306 ~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~  384 (451)
T 2rkv_A          306 PGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYL-HNNPDKSNVSLTADADPSTSVMLSSWAKVG  384 (451)
T ss_dssp             CSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHH-HHCSCCTTBCTTTTCCTTTCEEEEECTTCC
T ss_pred             cccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHH-hcCCCccccccccccCCCCCEEEeccccCC
Confidence            9999999999999999999999999999999999988888 99999999 5 33211        124579999999999


Q ss_pred             CCccccc--CCccCC
Q 037938          390 LERVDFG--MGRPTQ  402 (402)
Q Consensus       390 ~~~~DFG--~G~P~~  402 (402)
                      +|++|||  ||+|++
T Consensus       385 ~y~~DFG~gwG~P~~  399 (451)
T 2rkv_A          385 LWDYDFGLGLGKPET  399 (451)
T ss_dssp             GGGCCTTCSSCSCSE
T ss_pred             ccccccCCCCCCceE
Confidence            9999998  799974


No 6  
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.21  E-value=4.2e-09  Score=102.88  Aligned_cols=291  Identities=15%  Similarity=0.128  Sum_probs=162.3

Q ss_pred             CCeeeCCccccccccccc-ceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeCCCCeE-
Q 037938           22 STVLSLSALDSQLFLRFT-IEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCLGQGAV-   99 (402)
Q Consensus        22 ~~~~~LS~lD~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~-   99 (402)
                      ...++||++++.+....| +..++-++      ...+.++|+++|.+++...|.|..++....++  .+.+......+. 
T Consensus         5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~------g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~--~~q~v~~~~~~~~   76 (422)
T 1q9j_A            5 SVIRKLSHSEEVFAQYEVFTSMTIQLR------GVIDVDALSDAFDALLETHPVLASHLEQSSDG--GWNLVADDLLHSG   76 (422)
T ss_dssp             SEEEECCHHHHHHHHTTCEEEEEEEEE------SCCCHHHHHHHHHHHHHHCGGGSEEEEECTTS--SEEEEECCSSSCC
T ss_pred             ceeecCCHHHHHHHhcCceEEEEEEEe------cCCCHHHHHHHHHHHHHhCccceEEEEecCCc--ceeeeccCCCCCc
Confidence            357899999886532223 33444444      34788999999999999999999999876543  333333322222 


Q ss_pred             EEEEeecCCCccccccCcCchHHHhcccccccccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHHHHHHHHHHH
Q 037938          100 FIEAVDRESTIDDFERAPRYVTQWRKLLSLYVADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSAEFLNLFTEL  179 (402)
Q Consensus       100 f~~~~~~~~~l~~l~~~~~p~~~~~~l~p~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~  179 (402)
                      +.+.+ .    .+...   .....+.-.++    + ...|++++.+.. .+++..|.+.+||.++||.|+..|++.|.+.
T Consensus        77 ~~~~d-~----~~~~~---~~~~~~~~~~~----d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~  142 (422)
T 1q9j_A           77 ICVID-G----TAATN---GSPSGNAELRL----D-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSR  142 (422)
T ss_dssp             CEEEC--------------------CCCCC----C-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred             eEEEE-C----CCCCc---chhhhcccCcc----C-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHH
Confidence            22111 1    00000   00000110111    2 467999998877 7778999999999999999999999999999


Q ss_pred             hcc----CCcCCCCCCCCCCCccc--CcCCCCCCCcc-ccccccccccCCccccc--cc---cccCCcccCCCCCceeEE
Q 037938          180 STS----RHNELGGGHSLPKPVWD--RHLMNSSSSRQ-QHAHTRASSVSHLEFNR--VA---DLCGFVSRFSNERLVPTS  247 (402)
Q Consensus       180 ~rg----~~~~~~~~~~~~~P~~d--r~~l~~~~~p~-~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~  247 (402)
                      +++    ...    ......++.+  ......+.-.. ..+   .......+|..  .+   .++...............
T Consensus       143 Y~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~  215 (422)
T 1q9j_A          143 YTDAVTTGDP----GPITPQPTPLSMEAVLAQRGIRKQGLS---GAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTR  215 (422)
T ss_dssp             HHHHHHSSSC----CCCCCCCCCBCHHHHHHHSSCCC--------CTTSSTTTTCC-------------CCSBCCCCEEE
T ss_pred             HHHhhccCCC----CCCCCCCCCCCHHHHHHhcCCcccccc---hhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceE
Confidence            974    211    0111112111  00000000000 000   00000012211  00   111000011122345678


Q ss_pred             EEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCcccEEEEEEeecCCCCCCCCC----CCcccce
Q 037938          248 ITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNLPSNQILKLLFSINVRNRVKPSLP----SGYYGNA  323 (402)
Q Consensus       248 f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp----~~Y~GN~  323 (402)
                      +.++.+..++|++.|.+      ..+|.++++.|.+-..+.|-+. .......+.+++++|.+..|+++    .+..|.+
T Consensus       216 ~~l~~~~~~~l~~~a~~------~~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f  288 (422)
T 1q9j_A          216 LWLSKQQTSDLMAFGRE------HRLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAA  288 (422)
T ss_dssp             ECCCHHHHHHHHHHHTT------TTCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEE
T ss_pred             EEeCHHHHHHHHHHHHH------hCCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhhhhhhheee
Confidence            89999999999999875      3689999999986655554422 34567899999999998765443    2444554


Q ss_pred             eeeeeeccchhHhhhchHHHHHHHHHHHHHh
Q 037938          324 FVLGCAQTRVKDLTEKGLGHAAMLVKKAKER  354 (402)
Q Consensus       324 ~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~  354 (402)
                      +...    +..  .+.++.+++..+++.+.+
T Consensus       289 ~n~l----p~~--~~~~~~~~l~~v~~~~~~  313 (422)
T 1q9j_A          289 SYLA----EIG--PNTDIVDLASDIVATLRA  313 (422)
T ss_dssp             EEEE----CCC--SSCCHHHHHHHHHHHHHH
T ss_pred             eeee----ecc--CCCCHHHHHHHHHHHHHH
Confidence            4333    211  134566777777777764


No 7  
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.77  E-value=1.5e-07  Score=94.08  Aligned_cols=290  Identities=10%  Similarity=-0.048  Sum_probs=158.1

Q ss_pred             CCeeeCCcccccc------cccccceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeCC
Q 037938           22 STVLSLSALDSQL------FLRFTIEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCLG   95 (402)
Q Consensus        22 ~~~~~LS~lD~~~------~~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~   95 (402)
                      +..++||+.-+.+      .+.......+.|+..    ...+.++|+++|.+++...|.|--++....+   ...+....
T Consensus        11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~----g~ld~~~L~~A~~~lv~rh~~LRt~f~~~~~---~~~~v~~~   83 (493)
T 4hvm_A           11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGS----GRIDDDRLAAAADEVLDAFPLLRVNFVDDDG---LWMRTREN   83 (493)
T ss_dssp             -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEE----SSCCHHHHHHHHHHHHHHCGGGGEEEEESSS---EEEEECSC
T ss_pred             CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEe----CCCCHHHHHHHHHHHHHhchhceeEEEccCC---EEEEecCC
Confidence            5689999876532      111112234444443    3488999999999999999999999987542   44322233


Q ss_pred             CCeEEEEEeecCCCccccccCcCchHHHhcc----cccccccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHHH
Q 037938           96 QGAVFIEAVDRESTIDDFERAPRYVTQWRKL----LSLYVADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSAE  171 (402)
Q Consensus        96 ~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l----~p~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~~  171 (402)
                      . +.+.+.+ ... .++      +...+.++    ...+.  +....|++++.+....++...|.+.+||+++||.|+..
T Consensus        84 ~-~~~~~~d-~~~-~~~------~~~~~~~~~~~~~~~~f--dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~  152 (493)
T 4hvm_A           84 A-DALVRSD-LRG-HPD------PQARCVELLRADRDRPT--DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM  152 (493)
T ss_dssp             C-CCEEEEE-CTT-SSS------HHHHHHHHHHHHHSSCC--CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred             C-CCceEEE-CCC-CCc------hHHHHHHHHHHHhcCCC--CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence            3 5444433 210 000      10112222    11111  22456999998877777778999999999999999999


Q ss_pred             HHHHHHHHhccCCcCCCCCCCCCCCcccCcCC-CC---CCCccccccccccccCCccccc--cccccC-CcccCCCCCce
Q 037938          172 FLNLFTELSTSRHNELGGGHSLPKPVWDRHLM-NS---SSSRQQHAHTRASSVSHLEFNR--VADLCG-FVSRFSNERLV  244 (402)
Q Consensus       172 fl~~wa~~~rg~~~~~~~~~~~~~P~~dr~~l-~~---~~~p~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~  244 (402)
                      +++.+.+.+.|..      .+  .++.|-... ..   ...+..       . ...+|..  ..+.+. ...........
T Consensus       153 l~~~l~~~Y~g~~------~~--~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~W~~~l~~~~~l~~~~~~~~~~~  216 (493)
T 4hvm_A          153 VLGAVWQAYYGRF------RP--AQYRDFAEVADFHPLDRETVR-------V-ARHRWWSRRLPALPVRGGDGGPVGPPE  216 (493)
T ss_dssp             HHHHHHHHHTTCC------CG--GGSBCGGGTTTCCTTCSHHHH-------H-HHHHHHHHHGGGSCCCC-------CCE
T ss_pred             HHHHHHHHhCCCC------CC--cCHHHHHHHHhhhhcccChhh-------H-HHHHHHHHhccCCCCCCCCCCCCCCCe
Confidence            9999999996652      11  222111000 00   000000       0 0011211  000000 00000111256


Q ss_pred             eEEEEeCHHHHHHHHHHHhccCCCCCCCcC--HHHHHHHHHHHHHHHHcC-C-------CCcccEEEEEEeecCCCCCCC
Q 037938          245 PTSITFDKRRLNELRKLALSTSRPSELAYT--SFEVLSAHVWRSWARSLN-L-------PSNQILKLLFSINVRNRVKPS  314 (402)
Q Consensus       245 ~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vS--t~d~l~A~lW~~~~~ar~-~-------~~~~~~~l~~~vd~R~rl~p~  314 (402)
                      ...+.++.+..++|++.|.+      ..+|  .+.++.|.+-..+.+-+. .       .......+.+++++|..   +
T Consensus       217 ~~~~~l~~~~~~~l~~~a~~------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~---~  287 (493)
T 4hvm_A          217 TSRLRVPGSRWQALTEPGGP------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH---L  287 (493)
T ss_dssp             EEEEEEEHHHHHHHHCC------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH---T
T ss_pred             eEEEEcCHHHHHHHHHHHHH------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC---c
Confidence            77899999999999988775      3578  999999875444433310 0       34467899999999965   2


Q ss_pred             CCCCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHh
Q 037938          315 LPSGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKER  354 (402)
Q Consensus       315 lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~  354 (402)
                      --.+.+|+++......+..+...+.++.+++..+++.+.+
T Consensus       288 ~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~  327 (493)
T 4hvm_A          288 QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD  327 (493)
T ss_dssp             TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred             chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence            2356778876655444443321134566666666665544


No 8  
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.67  E-value=3.1e-06  Score=84.98  Aligned_cols=283  Identities=14%  Similarity=0.054  Sum_probs=161.9

Q ss_pred             CCeeeCCccccccc--------cccc-ceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEE
Q 037938           22 STVLSLSALDSQLF--------LRFT-IEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVV   92 (402)
Q Consensus        22 ~~~~~LS~lD~~~~--------~~~~-~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~   92 (402)
                      ...++||+.-+.+-        ...| +...+-++      ...+.++|++++.+++...|.|--++....+.  ...+.
T Consensus        94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~------g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~--~~q~v  165 (520)
T 2jgp_A           94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIE------GKLERTRVEAAFQRLIARHESLRTSFAVVNGE--PVQNI  165 (520)
T ss_dssp             CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEE------ECCCHHHHHHHHHHHHHHCGGGGEEEEEETTE--EEEEE
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEEC------CCCCHHHHHHHHHHHHHHhHhheeEEEeeCCE--EEEEE
Confidence            46789998765320        1123 44455554      34788999999999999999999999865321  22222


Q ss_pred             eCCCCeEEEEEeecCCCccccccCcCchHHHhcccccccccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHHHH
Q 037938           93 CLGQGAVFIEAVDRESTIDDFERAPRYVTQWRKLLSLYVADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSAEF  172 (402)
Q Consensus        93 ~~~~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l~p~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~~f  172 (402)
                      .....+.+.+.+ .  +-+++      . ...+....+.  +....|++++.+....++...|.+.+||.++||.|+..|
T Consensus       166 ~~~~~~~~~~~~-~--~~~~~------~-~~~~~~~~~f--dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l  233 (520)
T 2jgp_A          166 HEDVPFALAYSE-V--TEEEA------R-ELVSSLVQPF--DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL  233 (520)
T ss_dssp             CSCCCCCCEEEE-C--CHHHH------H-HHHHHTCCCC--CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred             CCCCCCceEEEe-C--CHHHH------H-HHHHHhcCCC--CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence            222222222222 1  10000      0 0111111111  224578999888777677789999999999999999999


Q ss_pred             HHHHHHHhccCCcCCCCCCCCCCCccc-----CcCCCCCCCccccccccccccCCccccc-----cc---cccC--Cccc
Q 037938          173 LNLFTELSTSRHNELGGGHSLPKPVWD-----RHLMNSSSSRQQHAHTRASSVSHLEFNR-----VA---DLCG--FVSR  237 (402)
Q Consensus       173 l~~wa~~~rg~~~~~~~~~~~~~P~~d-----r~~l~~~~~p~~~~~~~~~~~~~~~~~~-----~~---~~~~--~~~~  237 (402)
                      ++.+.+.+++..     .++...++.|     +.....   +..+        ....|..     .+   .++.  +.+.
T Consensus       234 ~~el~~~Y~~~~-----l~~~~~~~~d~~~~~~~~~~~---~~~~--------~~~~yW~~~l~~~~~~~~lp~~~~~~~  297 (520)
T 2jgp_A          234 LAEWVQLYQGDV-----LPELRIQYKDFAVWQQEFSQS---AAFH--------KQEAYWLQTFADDIPVLNLPTDFTRPS  297 (520)
T ss_dssp             HHHHHHHHTTCC-----CCCCSCCHHHHHHHHHHHTTS---HHHH--------HHHHHHHHHTSSCCCCCCCCCSSCCCS
T ss_pred             HHHHHHHHccCC-----CCCCCCCHHHHHHHHHHhhcC---hhhH--------HHHHHHHHHhCCCCCcCCCCCCCCCCC
Confidence            999999998852     1111111111     111110   0000        0001110     00   0110  0000


Q ss_pred             CCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCcccEEEEEEeecCCCCCCCCCC
Q 037938          238 FSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNLPSNQILKLLFSINVRNRVKPSLPS  317 (402)
Q Consensus       238 ~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~  317 (402)
                      ..........+.++.+..++|++.|.+.      .+|.+.++.|..-..+.+--   ......+.+++++|..-  . -+
T Consensus       298 ~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~--~-~~  365 (520)
T 2jgp_A          298 TQSFAGDQCTIGAGKALTEGLHQLAQAT------GTTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHA--D-LE  365 (520)
T ss_dssp             SCCCBEEEEEEECCHHHHHHHHHHHHHH------TCCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSG--G-GT
T ss_pred             CCCCCccEEEEeCCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCch--h-hh
Confidence            1122345678899999999999998764      57999999887544444432   34568999999999752  2 24


Q ss_pred             CcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHh
Q 037938          318 GYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKER  354 (402)
Q Consensus       318 ~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~  354 (402)
                      +..|+++......+..+.  +.++.+++..+++.+.+
T Consensus       366 ~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~  400 (520)
T 2jgp_A          366 PIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD  400 (520)
T ss_dssp             TCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred             ccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence            666777655544333221  34566777777766654


No 9  
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.59  E-value=1.7e-06  Score=84.66  Aligned_cols=257  Identities=14%  Similarity=-0.028  Sum_probs=146.2

Q ss_pred             hhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeCCCCeEEEEEeecCCCccccccCcCchHHHhccc----ccc
Q 037938           55 LATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCLGQGAVFIEAVDRESTIDDFERAPRYVTQWRKLL----SLY  130 (402)
Q Consensus        55 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l~----p~~  130 (402)
                      ..+.++|++++.+++...|.|--++...  + |  .+. ....+.+.+.+ .. ..+      .+...+.+++    ..|
T Consensus        32 ~ld~~~L~~A~~~lv~rh~~LRt~f~~~--~-~--~v~-~~~~~~~~~~d-~~-~~~------~~~~~~~~~~~~~~~~~   97 (436)
T 1l5a_A           32 PLDTTLLLRALHLTVSEIDLFRARFSAQ--G-E--LYW-HPFSPPIDYQD-LS-IHL------EAEPLAWRQIEQDLQRS   97 (436)
T ss_dssp             SCCHHHHHHHHHHHHHTCGGGGEEECTT--C-C--EEE-CSSCCCCEEEE-CT-TCT------THHHHHHHHHHHHHTSC
T ss_pred             CCCHHHHHHHHHHHHHHhheeEEEEEec--C-C--eEC-CCcCCCccEEe-CC-CCC------CHHHHHHHHHHHHhcCC
Confidence            4788999999999999999999888743  2 2  222 22122222222 11 000      0111122221    111


Q ss_pred             cccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHHHHHHHHHHHhccCCcCCCCCCCCCCCccc-----CcCCCC
Q 037938          131 VADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSAEFLNLFTELSTSRHNELGGGHSLPKPVWD-----RHLMNS  205 (402)
Q Consensus       131 ~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~d-----r~~l~~  205 (402)
                      .  +....|++++.+.+..++...|.+.+||.++||.|+..|++.+.+.+++...... .+....++.|     +..+..
T Consensus        98 f--dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  174 (436)
T 1l5a_A           98 S--TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT-PTAAFKPYQSYLEEEAAYLTS  174 (436)
T ss_dssp             C--CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC-CCCCCCCHHHHHHHHHHHHTS
T ss_pred             C--CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC-CCCCccCHHHHHHHHHHhhcc
Confidence            1  2245689998887776778999999999999999999999999999984210000 0111111110     000110


Q ss_pred             CCCccccccccccccCCccccc--cccccC----Cc-ccCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHH
Q 037938          206 SSSRQQHAHTRASSVSHLEFNR--VADLCG----FV-SRFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEV  278 (402)
Q Consensus       206 ~~~p~~~~~~~~~~~~~~~~~~--~~~~~~----~~-~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~  278 (402)
                         .       ... ....|..  ..+.+.    +. ............+.++.+..++|++.|.+.      .+|.+.+
T Consensus       175 ---~-------~~~-~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~  237 (436)
T 1l5a_A          175 ---H-------RYW-QDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN------QIGWPDA  237 (436)
T ss_dssp             ---H-------HHH-HHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT------TCCHHHH
T ss_pred             ---H-------hHH-HHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh------CCCHHHH
Confidence               0       000 0001111  000000    00 001122345678899999999999998863      5899999


Q ss_pred             HHHHHHHHHHHHcCCCCcccEEEEEEeecCCCCCCCCCCCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHh
Q 037938          279 LSAHVWRSWARSLNLPSNQILKLLFSINVRNRVKPSLPSGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKER  354 (402)
Q Consensus       279 l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~  354 (402)
                      +.|.+-..+.+-   .. ....+.+++++|..  + --.+..|+++-.....+..+.  +.++.+++..+++.+.+
T Consensus       238 l~aa~~~~L~~~---~g-~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~  304 (436)
T 1l5a_A          238 LVALCALYLESA---EP-DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS  304 (436)
T ss_dssp             HHHHHHHHHHHH---ST-TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh---hC-CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence            999754444433   23 67899999999965  2 224566776655444333221  34567777777776654


No 10 
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.54  E-value=1.6e-05  Score=78.46  Aligned_cols=293  Identities=13%  Similarity=0.009  Sum_probs=164.2

Q ss_pred             CCeeeCCccccccc------ccccceEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeC-
Q 037938           22 STVLSLSALDSQLF------LRFTIEYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCL-   94 (402)
Q Consensus        22 ~~~~~LS~lD~~~~------~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~-   94 (402)
                      ...++||+..+++.      ...| ...+.|+..    ...+.+.|+++|.+++...|.|--++....++  ...+... 
T Consensus        15 ~~~~pls~~Q~~~~~~~~~~~~~y-~~~~~~~l~----g~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~--~~q~v~~~   87 (466)
T 2xhg_A           15 AGNVPLTPIQKWFFGKNFTNTGHW-NQSSVLYRP----EGFDPKVIQSVMDKIIEHHDALRMVYQHENGN--VVQHNRGL   87 (466)
T ss_dssp             CEECCCCHHHHHHHHTTCTTTTCB-EEEEEEEET----TCCCHHHHHHHHHHHHHHSGGGGEEEECGGGC--CEEEECCS
T ss_pred             CCCCCCCHHHHHHHhCCCCCcCcc-eeEEEEEcC----CCCCHHHHHHHHHHHHHhChHhheEEecCCCc--eeeecccc
Confidence            46788998766331      1122 334444443    34788999999999999999999999865322  2333222 


Q ss_pred             -CCCeEEEEEeecCCCccccccCcCchHHHhcc---cccccccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHH
Q 037938           95 -GQGAVFIEAVDRESTIDDFERAPRYVTQWRKL---LSLYVADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSA  170 (402)
Q Consensus        95 -~~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l---~p~~~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~  170 (402)
                       ...+.+.+.+ ... .++.      ...++.+   ...+  -+....|++++.+....++.. |-+.+||.++||.|+.
T Consensus        88 ~~~~~~~~~~d-~~~-~~~~------~~~~~~~~~~~~~~--fdl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~~  156 (466)
T 2xhg_A           88 GGQLYDFFSYN-LTA-QPDV------QQAIEAETQRLHSS--MNLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISWR  156 (466)
T ss_dssp             SSCCCEEEEEE-CTT-CSCH------HHHHHHHHHHHHTT--CCTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHHH
T ss_pred             ccccceeEEEe-cCC-cccH------HHHHHHHHHHHHhc--cCCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhHH
Confidence             1233443333 210 1111      1111111   1011  123457899988877665444 6799999999999999


Q ss_pred             HHHHHHHHHhccCCcCCCCCCCCCC----Cccc-----CcCCCCCCCccccccccccccCCccccc-----cc--cccCC
Q 037938          171 EFLNLFTELSTSRHNELGGGHSLPK----PVWD-----RHLMNSSSSRQQHAHTRASSVSHLEFNR-----VA--DLCGF  234 (402)
Q Consensus       171 ~fl~~wa~~~rg~~~~~~~~~~~~~----P~~d-----r~~l~~~~~p~~~~~~~~~~~~~~~~~~-----~~--~~~~~  234 (402)
                      .|++.+.+.+++....   .++..+    ++.|     +..+.   .+       ... ...+|..     .+  .++..
T Consensus       157 ~l~~el~~~Y~~~~~g---~~~~l~~~~~~y~~~~~~~~~~~~---~~-------~~~-~~~~~W~~~l~~~~~~~lp~~  222 (466)
T 2xhg_A          157 ILFEDLATGYAQALAG---QAISLPEKTDSFQSWSQWLQEYAN---EA-------DLL-SEIPYWESLESQAKNVSLPKD  222 (466)
T ss_dssp             HHHHHHHHHHHHHHTT---CCCCCCCCCSCHHHHHHHHHHHTT---SH-------HHH-TTHHHHHHHHHHCCCCCCCCS
T ss_pred             HHHHHHHHHHHHHHcC---CCCCCCCCCCCHHHHHHHHHHHhc---Cc-------cch-hhhHHHHHhhccCCcccCCcc
Confidence            9999999998752100   011111    1111     00010   00       000 0011110     00  11100


Q ss_pred             cc--cCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCcccEEEEEEeecCCCCC
Q 037938          235 VS--RFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLNLPSNQILKLLFSINVRNRVK  312 (402)
Q Consensus       235 ~~--~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~  312 (402)
                      ..  ...........+.++.+..++|++.+....     .+|.++++.|.+-..+.+--   ......+.+++++|....
T Consensus       223 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~-----~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~~gR~~~~  294 (466)
T 2xhg_A          223 YEVTDCKQKSVRNMRIRLHPEETEQLLKHANQAY-----QTEINDLLLAALGLAFAEWS---KLAQIVIHLEGHGREDII  294 (466)
T ss_dssp             SCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGTT-----TCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEECCCCSCS
T ss_pred             ccccccccccceEEEEEcCHHHHHHHHHHhHHhh-----CCCHHHHHHHHHHHHHHHHh---CCCceEEEecCCCCCccc
Confidence            00  001123456788999999999998875432     57899999987655555443   345688999999997642


Q ss_pred             C-CCCCCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHhCC
Q 037938          313 P-SLPSGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKERVD  356 (402)
Q Consensus       313 p-~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~  356 (402)
                      + +--.+.+|+++......+..+.  +.++.+++..|++.+.++.
T Consensus       295 ~~~~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~  337 (466)
T 2xhg_A          295 EQANVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP  337 (466)
T ss_dssp             TTCCCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred             cCCCccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence            1 1224566776655443333221  3567888888888887763


No 11 
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.33  E-value=3.8e-06  Score=93.71  Aligned_cols=268  Identities=9%  Similarity=-0.020  Sum_probs=150.9

Q ss_pred             hhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeCCCCeEEEEEeecCCCccccccCcCchHHHhccc----ccc
Q 037938           55 LATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCLGQGAVFIEAVDRESTIDDFERAPRYVTQWRKLL----SLY  130 (402)
Q Consensus        55 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~~~gv~f~~~~~~~~~l~~l~~~~~p~~~~~~l~----p~~  130 (402)
                      ..+.++|+++|.+++...+.|--++....++ +...+......+.+.+.+ ..    +..... ....++.+.    ..+
T Consensus        46 ~ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~-~p~Q~v~~~~~~~~~~~d-~~----~~~~~~-~~~~~~~~~~~~~~~~  118 (1304)
T 2vsq_A           46 SLNIKCLEESMNVIMDRYDVFRTVFIHEKVK-RPVQVVLKKRQFHIEEID-LT----HLTGSE-QTAKINEYKEQDKIRG  118 (1304)
T ss_dssp             CCCHHHHHHHHHHHHHHCGGGGEEEECSSCS-SCEEEEESCCCCCEEEEE-CT----TSCHHH-HHHHHHHHHHHHHHHC
T ss_pred             CcCHHHHHHHHHHHHHhhhhceEEEEEcCCC-eEEEEECCCCCCceEEEE-CC----CCCchh-HHHHHHHHHHHHhcCC
Confidence            4889999999999999999999999765432 133333333333333322 11    110000 001122221    011


Q ss_pred             cccccCCCCceEEEEEEeecCcEEEeeeeeecccchhhHHHHHHHHHHHhccCCcCCCCCCCCCCCcccCc-CCCCCCCc
Q 037938          131 VADVLKGVPPLVVQLTWLRDGAAALGIGFNHCVCDGIGSAEFLNLFTELSTSRHNELGGGHSLPKPVWDRH-LMNSSSSR  209 (402)
Q Consensus       131 ~~~~~~~~P~l~vqvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~P~~dr~-~l~~~~~p  209 (402)
                      .  +....|++++.+.+..++...|-+.+||.++||.|+..+++.+.+++++.....+...+...++-|-. .+...+..
T Consensus       119 f--dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~  196 (1304)
T 2vsq_A          119 F--DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQ  196 (1304)
T ss_dssp             C--CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHH
T ss_pred             C--CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhh
Confidence            1  23457999999887777789999999999999999999999999999753110000001111211100 01100000


Q ss_pred             cccccccccccCCccccc-----cc---cccCCc-ccCCCCCceeEEEEeCHHHHHHHHHHHhccCCCCCCCcCHHHHHH
Q 037938          210 QQHAHTRASSVSHLEFNR-----VA---DLCGFV-SRFSNERLVPTSITFDKRRLNELRKLALSTSRPSELAYTSFEVLS  280 (402)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~-----~~---~~~~~~-~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~vSt~d~l~  280 (402)
                                 ...+|..     .+   .++... ............+.++++..++||+.|.+.      .+|.+.+|.
T Consensus       197 -----------~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------~~T~~~vll  259 (1304)
T 2vsq_A          197 -----------ASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ------HTTLSTALQ  259 (1304)
T ss_dssp             -----------HHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT------TCCHHHHHH
T ss_pred             -----------HHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc------CCCHHHHHH
Confidence                       0011111     00   011000 001122345667889999999999999863      579999998


Q ss_pred             HHHHHHHHHHcCCCCcccEEEEEEeecCCCCCCCCCCCcccceeeeeeeccchhHhhhchHHHHHHHHHHHHHh
Q 037938          281 AHVWRSWARSLNLPSNQILKLLFSINVRNRVKPSLPSGYYGNAFVLGCAQTRVKDLTEKGLGHAAMLVKKAKER  354 (402)
Q Consensus       281 A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~  354 (402)
                      |..-..+.|-   .......+..+++.|.+-.+.+ ++..|+++-.....+..+  .+.++.++...+++...+
T Consensus       260 aa~a~~L~r~---tg~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~  327 (1304)
T 2vsq_A          260 AVWSVLISRY---QQSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQ  327 (1304)
T ss_dssp             HHHHHHHHHH---HTCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh---cCCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence            8744444333   2345689999999997643222 455666654443333322  135677777777777654


No 12 
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.01  E-value=0.0012  Score=65.92  Aligned_cols=279  Identities=12%  Similarity=0.023  Sum_probs=143.3

Q ss_pred             ChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEe--C-CC-------CeEEEEEeecCCCccccccCcCchHHH
Q 037938           54 SLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVC--L-GQ-------GAVFIEAVDRESTIDDFERAPRYVTQW  123 (402)
Q Consensus        54 ~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~--~-~~-------gv~f~~~~~~~~~l~~l~~~~~p~~~~  123 (402)
                      .....++||.|+-.+--++|-+|+++..+..  +.....+  . ++       .--|.+.. .+.+-+|+-         
T Consensus        71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~--~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~-~~~t~~e~~---------  138 (519)
T 3fot_A           71 LQNLKEMFELALLDARFEHPECACTVSWDDE--VPAIITYESPESNESARDWARGCIHVQP-TAKSALDLW---------  138 (519)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGGCEEECCSS--SSCEEEEECCSSHHHHHHHHHHHEEEEE-CSCCHHHHH---------
T ss_pred             HHHHHHHHHHHHHHHHhhCCcceeEEeeCCC--CcccEEEecCCCHHHHHHHHHhcEEEeC-CCCCHHHHH---------
Confidence            3577899999999999999999999987632  2322222  2 11       11344433 333333320         


Q ss_pred             hccc--ccccccccCCCCceEEEEEE--------eecC--cEEEeeeeeecccchhhHHHHHHHHHHHhccCCcCCCCCC
Q 037938          124 RKLL--SLYVADVLKGVPPLVVQLTW--------LRDG--AAALGIGFNHCVCDGIGSAEFLNLFTELSTSRHNELGGGH  191 (402)
Q Consensus       124 ~~l~--p~~~~~~~~~~P~l~vqvt~--------f~~G--G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~  191 (402)
                      ..+-  -.+... ....+...+.+..        +. +  -.-|.+.+||.++||.|...|++.+=+........   ..
T Consensus       139 ~~~~~~r~~~~~-~~p~~~~~l~~v~~~~~~~~~~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~---~~  213 (519)
T 3fot_A          139 SEMEEGRAAAND-NTPSKSIELFLLSDVSTDSTPIP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGR---SD  213 (519)
T ss_dssp             HHHHHHHHHTC--CCCCCSCEEEEEESSSSTTSCCC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC----C
T ss_pred             Hhhhhhhccccc-CCCccceEEEEEeccccccccCC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhcc---CC
Confidence            0000  000000 0001111111110        11 2  36777889999999999999999998777642100   00


Q ss_pred             CCCCCccc-CcCCCCCCCcccccccccc-ccCCcc-------ccc-----cccccCCcccCCCCCceeEEEEeCHHHHHH
Q 037938          192 SLPKPVWD-RHLMNSSSSRQQHAHTRAS-SVSHLE-------FNR-----VADLCGFVSRFSNERLVPTSITFDKRRLNE  257 (402)
Q Consensus       192 ~~~~P~~d-r~~l~~~~~p~~~~~~~~~-~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~  257 (402)
                      ....|.++ ..-. .+-+|..++..+.. ....++       |..     .+...-+.. .....-....+.|+++..++
T Consensus       214 ~~~~~~~~~g~E~-~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~-~~~~~~~~~~~~ls~~~t~~  291 (519)
T 3fot_A          214 SREMKKIQWGQEI-KNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQ-PGLALPRCVIHKLSADESID  291 (519)
T ss_dssp             GGGSCCCCTTTTG-GGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCC-CCCCCEEEEEEECCHHHHHH
T ss_pred             ccCCCcCCCCccc-ccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCC-CCCCCcceEEEEcCHHHHHH
Confidence            01111121 0000 00011111000000 000001       110     000000110 01122335688999999999


Q ss_pred             HHHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHcC---CCCcccEEEEEEeecCCCCCCCCCCCcccceeeeeeeccc--
Q 037938          258 LRKLALSTSRPSELAYTSFEVLSAHVWRSWARSLN---LPSNQILKLLFSINVRNRVKPSLPSGYYGNAFVLGCAQTR--  332 (402)
Q Consensus       258 Lk~~a~~~~~~~~~~vSt~d~l~A~lW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~--  332 (402)
                      |++.|++..+   ..+|-+.+|.|.+-.++.+...   ........+.++||+|+.+.++.-.+|||.+.....+.++  
T Consensus       292 L~~~ck~~~~---~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i  368 (519)
T 3fot_A          292 IVKAVKTRLG---PGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENL  368 (519)
T ss_dssp             HHHHHHHHTC---TTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCG
T ss_pred             HHHHHHhcCC---CCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEecCc
Confidence            9999998743   4789999998877666665422   1123467889999999999765556788887665543221  


Q ss_pred             --------hhHhhhc-hHHHHHHHHHHHHHh
Q 037938          333 --------VKDLTEK-GLGHAAMLVKKAKER  354 (402)
Q Consensus       333 --------~~~l~~~-~L~~~A~~iR~ai~~  354 (402)
                              .+|+.+. .+.++|..+++....
T Consensus       369 ~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~  399 (519)
T 3fot_A          369 KSITVSHKDEKELQVRALESACRNIKKSYRQ  399 (519)
T ss_dssp             GGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence                    1222211 156777777776655


No 13 
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=73.11  E-value=2.8  Score=36.28  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=32.8

Q ss_pred             CCceEEEEEEeecCc--EEEeeeeeecccchhhHHHHHHHHHHHhc
Q 037938          138 VPPLVVQLTWLRDGA--AALGIGFNHCVCDGIGSAEFLNLFTELST  181 (402)
Q Consensus       138 ~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r  181 (402)
                      .|++.+--..-.+|.  +-|++++||.++||.-...|++.+.+...
T Consensus       164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le  209 (213)
T 3cla_A          164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN  209 (213)
T ss_dssp             SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred             ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence            577764322112333  67899999999999999999999988764


No 14 
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=72.19  E-value=3  Score=36.18  Aligned_cols=44  Identities=18%  Similarity=0.305  Sum_probs=31.5

Q ss_pred             CCCceEEEEEEeecCc--EEEeeeeeecccchhhHHHHHHHHHHHh
Q 037938          137 GVPPLVVQLTWLRDGA--AALGIGFNHCVCDGIGSAEFLNLFTELS  180 (402)
Q Consensus       137 ~~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~  180 (402)
                      ..|++.+=-..-.+|.  +-|++++||.++||.-...|++.+.+..
T Consensus       171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l  216 (217)
T 2i9d_A          171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL  216 (217)
T ss_dssp             SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred             eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence            3577753211112333  6789999999999999999999998754


No 15 
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=71.80  E-value=4  Score=36.09  Aligned_cols=30  Identities=20%  Similarity=0.402  Sum_probs=27.3

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.++||.-...|++.+.+.+..
T Consensus       208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~  237 (243)
T 1dpb_A          208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD  237 (243)
T ss_dssp             EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999988753


No 16 
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=71.37  E-value=3.2  Score=36.05  Aligned_cols=45  Identities=22%  Similarity=0.444  Sum_probs=33.6

Q ss_pred             CCceEEEEEEeecCc--EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          138 VPPLVVQLTWLRDGA--AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       138 ~P~l~vqvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      .|++.+--..-.+|.  +-|++++||.++||.-...|++.+.+.+..
T Consensus       168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~  214 (219)
T 1q23_A          168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDE  214 (219)
T ss_dssp             SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence            577764322122333  788999999999999999999999987753


No 17 
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=67.55  E-value=3.7  Score=35.83  Aligned_cols=30  Identities=17%  Similarity=0.304  Sum_probs=27.4

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.+.||.-...|++.+.+....
T Consensus       187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~  216 (224)
T 3rqc_A          187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED  216 (224)
T ss_dssp             CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999998865


No 18 
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=67.50  E-value=4.3  Score=35.61  Aligned_cols=30  Identities=30%  Similarity=0.453  Sum_probs=27.2

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.++||.-...|++.+.+.+..
T Consensus       196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~  225 (233)
T 1scz_A          196 MYLALSYDHRLIDGRESVGFLVTIKELLED  225 (233)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence            569999999999999999999999988754


No 19 
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=67.44  E-value=3.9  Score=36.02  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=27.3

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.++||.-...|++.+.+.+..
T Consensus       204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~  233 (239)
T 3b8k_A          204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK  233 (239)
T ss_dssp             EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence            789999999999999999999999987743


No 20 
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=65.96  E-value=4.7  Score=36.04  Aligned_cols=30  Identities=20%  Similarity=0.343  Sum_probs=27.1

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.++||.-...|++.+.+.+..
T Consensus       224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~  253 (262)
T 2ii3_A          224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN  253 (262)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence            568999999999999999999999988753


No 21 
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=60.35  E-value=7  Score=34.80  Aligned_cols=30  Identities=20%  Similarity=0.376  Sum_probs=27.6

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.+.||.-...|++.+.+....
T Consensus       210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~  239 (256)
T 3mae_A          210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK  239 (256)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence            459999999999999999999999998865


No 22 
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=58.81  E-value=7.7  Score=34.37  Aligned_cols=30  Identities=33%  Similarity=0.461  Sum_probs=27.4

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.+.||.-...|++.+.+....
T Consensus       205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~  234 (250)
T 3l60_A          205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES  234 (250)
T ss_dssp             EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999988864


No 23 
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=47.43  E-value=51  Score=20.78  Aligned_cols=23  Identities=22%  Similarity=0.374  Sum_probs=20.4

Q ss_pred             eEEEEeCHHHHHHHHHHHhccCC
Q 037938          245 PTSITFDKRRLNELRKLALSTSR  267 (402)
Q Consensus       245 ~~~f~f~~~~l~~Lk~~a~~~~~  267 (402)
                      ...|+||+++-+.|++.|.++..
T Consensus         3 ~Vs~Y~SkEey~~L~klA~eE~e   25 (55)
T 1x93_A            3 AVSLYFSDEQYQKLEKMANEEEE   25 (55)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTS
T ss_pred             eEEEEecHHHHHHHHHHHHHHHH
Confidence            56899999999999999998764


No 24 
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=40.98  E-value=16  Score=27.79  Aligned_cols=46  Identities=20%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             eEEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeC
Q 037938           41 EYLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCL   94 (402)
Q Consensus        41 ~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~   94 (402)
                      -+.+.|+.       .+.+.|.++|...+.+-..+||.+...-+| ++++|...
T Consensus        84 vm~i~f~g-------ddlea~ekalkemirqarkfagtvtytl~g-n~l~i~it  129 (170)
T 4hhu_A           84 VMVIVFEG-------DDLEALEKALKEMIRQARKFAGTVTYTLSG-NRLVIVIT  129 (170)
T ss_dssp             EEEEEEEC-------SCHHHHHHHHHHHHHHHHHTTCEEEEEECS-SEEEEEEE
T ss_pred             EEEEEEec-------CcHHHHHHHHHHHHHHHHhhcceEEEEEeC-CEEEEEEe
Confidence            35677774       557889999999999999999999888665 47777544


No 25 
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=38.39  E-value=22  Score=18.50  Aligned_cols=19  Identities=37%  Similarity=0.683  Sum_probs=15.8

Q ss_pred             CCcCHHHHHHHHHHHHHHH
Q 037938          271 LAYTSFEVLSAHVWRSWAR  289 (402)
Q Consensus       271 ~~vSt~d~l~A~lW~~~~~  289 (402)
                      +-+++.|-|+-++|+++..
T Consensus         6 svftsqdylsdhlwralna   24 (26)
T 2xl1_A            6 SVFTSQDYLSDHLWRALNA   24 (26)
T ss_pred             ceeecHHHHHHHHHHHHhc
Confidence            4578889999999998763


No 26 
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=37.64  E-value=22  Score=23.92  Aligned_cols=38  Identities=21%  Similarity=0.239  Sum_probs=30.4

Q ss_pred             hHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeC
Q 037938           56 ATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCL   94 (402)
Q Consensus        56 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~   94 (402)
                      .+.+.+.++|...+.+-..+||.+...-+| +.++|...
T Consensus        10 ddleafekalkemirqarkfagtvtytldg-ndleirit   47 (85)
T 2kl8_A           10 DDLEAFEKALKEMIRQARKFAGTVTYTLDG-NDLEIRIT   47 (85)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTTCEEEEEECS-SCEEEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHhhcceEEEEecC-CeeEEEEe
Confidence            456888899999999999999999888665 36777654


No 27 
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=37.40  E-value=16  Score=27.79  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=34.8

Q ss_pred             EEEEecCCCCCCChhHHHHHHHHHHhcccccCCCCceeEecCCCCceeEEEeC
Q 037938           42 YLLVYRPRPGLDSLATVARVKSALAKALVPYYPLAGRVRAKQEGSGLLEVVCL   94 (402)
Q Consensus        42 ~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~g~~~i~~~   94 (402)
                      +.+.|+.       .+.+.|.++|...+.+-..+||.+...-+| ++++|...
T Consensus         4 m~i~f~g-------ddlea~ekalkemirqarkfagtvtytl~g-n~l~i~it   48 (170)
T 4hhu_A            4 MVIVFEG-------DDLEALEKALKEMIRQARKFAGTVTYTLSG-NRLVIVIT   48 (170)
T ss_dssp             EEEEEEC-------SCHHHHHHHHHHHHHHHHHTTCEEEEEEET-TEEEEEEE
T ss_pred             EEEEEec-------CcHHHHHHHHHHHHHHHHhhcceEEEEEeC-CEEEEEEe
Confidence            4567774       457889999999999999999999887654 46776543


No 28 
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=36.98  E-value=7.2  Score=37.56  Aligned_cols=30  Identities=30%  Similarity=0.476  Sum_probs=0.0

Q ss_pred             EEEeeeeeecccchhhHHHHHHHHHHHhcc
Q 037938          153 AALGIGFNHCVCDGIGSAEFLNLFTELSTS  182 (402)
Q Consensus       153 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg  182 (402)
                      +-|+++++|.++||.-...|++.+.+.+..
T Consensus       391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~  420 (428)
T 3dva_I          391 LALSLSFDHRMIDGATAQKALNHIKRLLSD  420 (428)
T ss_dssp             ------------------------------
T ss_pred             EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence            359999999999999999999999877754


No 29 
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=27.74  E-value=1.3e+02  Score=19.66  Aligned_cols=27  Identities=22%  Similarity=0.276  Sum_probs=22.6

Q ss_pred             CCceeEEEEeCHHHHHHHHHHHhccCC
Q 037938          241 ERLVPTSITFDKRRLNELRKLALSTSR  267 (402)
Q Consensus       241 ~~~~~~~f~f~~~~l~~Lk~~a~~~~~  267 (402)
                      .+.-...|+||+++-+.|.+.|.++..
T Consensus        13 k~~~~Vs~Y~SkEey~~L~klA~eE~e   39 (66)
T 2k1o_A           13 KRNFSVTFYLSKEEHDVLRRLADEEVE   39 (66)
T ss_dssp             CCCEEEEEEEEHHHHHHHHHHHHTTCS
T ss_pred             ccceEEEEEecHHHHHHHHHHHHHHHH
Confidence            345568999999999999999998764


Done!