BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037939
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q17X87|LEPA_HELAH Elongation factor 4 OS=Helicobacter acinonychis (strain Sheeba)
GN=lepA PE=3 SV=1
Length = 604
Score = 35.0 bits (79), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 13 SLASLSETQGVKSTRVLDLLIRDYTFKSLDNHAIKTGNLHNVHLP-ANLSGIKVDM---V 68
+L + TQGV++ + + T+ +LDNH ++ + LP AN+ +K D+ +
Sbjct: 105 ALLVVDATQGVEAQTIAN------TYIALDNHLEILPVINKIDLPNANVLEVKQDIEDTI 158
Query: 69 RFRCGSLRRYGARVKEFHLGIGVIVQPCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVS 128
C S+ A+ K +GI +++ + + + ++ Y ++ Y
Sbjct: 159 GIDCSSVNEVSAKAK---IGIKDLLEKIITTIPAPSGDASAPLKALIYDSW-FDNY---- 210
Query: 129 PVLGILAYNSVTDVNFNNRFELQILANGK 157
LG LA + D N N E+ ++ GK
Sbjct: 211 --LGALALVRIMDGNINTEQEILVMGTGK 237
>sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1
Length = 1207
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 48/196 (24%)
Query: 106 NLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPIT----I 161
NLG+N DLSG ++ LG L ++ D+++N RF I + +T I
Sbjct: 693 NLGHN---------DLSG--MIPQQLGGLKNVAILDLSYN-RFNGTIPNSLTSLTLLGEI 740
Query: 162 DFRNTTRVTNISGIKPFCANFQ-----RDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPP 216
D N N+SG+ P A F R +L P C + P
Sbjct: 741 DLSNN----NLSGMIPESAPFDTFPDYRFANNSLCGYPLPLPCSSG------------PK 784
Query: 217 SEGPEQVRKKISRWKLAVGTTVGAAVGAF-LLGLLLVAMFVKVKKKARMEELERRAYEEE 275
S+ + + + LA +G F + GL++VA+ K +RR +E
Sbjct: 785 SDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETK----------KRRRKKEA 834
Query: 276 ALQVSMVGHIRAPTAS 291
AL+ M GH + TA+
Sbjct: 835 ALEAYMDGHSHSATAN 850
>sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum
GN=CURL3 PE=1 SV=1
Length = 1207
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 48/196 (24%)
Query: 106 NLGYNWSSIYYANYDLSGYQLVSPVLGILAYNSVTDVNFNNRFELQILANGKPIT----I 161
NLG+N DLSG ++ LG L ++ D+++N RF I + +T I
Sbjct: 693 NLGHN---------DLSG--MIPQQLGGLKNVAILDLSYN-RFNGTIPNSLTSLTLLGEI 740
Query: 162 DFRNTTRVTNISGIKPFCANFQ-----RDGKVTLTNQVSPYVCVARKHGHFGLVTKYPPP 216
D N N+SG+ P A F R +L P C + P
Sbjct: 741 DLSNN----NLSGMIPESAPFDTFPDYRFANNSLCGYPLPIPCSSG------------PK 784
Query: 217 SEGPEQVRKKISRWKLAVGTTVGAAVGAF-LLGLLLVAMFVKVKKKARMEELERRAYEEE 275
S+ + + + LA +G F + GL++VA+ K +RR +E
Sbjct: 785 SDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETK----------KRRRKKEA 834
Query: 276 ALQVSMVGHIRAPTAS 291
AL+ M GH + TA+
Sbjct: 835 ALEAYMDGHSHSATAN 850
>sp|P41181|AQP2_HUMAN Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1
Length = 271
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 85 FHLGIGVIVQPC-------VERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGILAYN 137
F LGIG +VQ + V V +G + S + A Y + QL+ V G +
Sbjct: 48 FGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAA--QLLGAVAGAALLH 105
Query: 138 SVTDVNFNNRFELQILAN----GKPITIDFRNTTRVTNISGIKPFCANFQRDGKVTLTNQ 193
+T + + L+N G+ +T++ T ++ + F + +R G+ T
Sbjct: 106 EITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLV----LCIFASTDERRGENPGTPA 161
Query: 194 VSPYVCVARKHG---HFGLVTKYPPPSEGPEQVRKKIS-RWKLAVGTTVGAAVGAFL 246
+S VA H H+ + P S P V K W +G VGA +G+ L
Sbjct: 162 LSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLL 218
>sp|P34080|AQP2_RAT Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1
Length = 271
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 30/211 (14%)
Query: 85 FHLGIGVIVQ-----------PCVERVVVVRQNLGYNWSSIYYANYDLSGYQLVSPVLGI 133
F LGIG++VQ P V +V ++ + ++ Y A QL+ V G
Sbjct: 48 FGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAA------QLLGAVAGA 101
Query: 134 LAYNSVTDVNFNNRFELQILAN----GKPITIDFRNTTRVTNISGIKPFCANFQRDGKVT 189
+ +T V + L N G+ +T++ T ++ + F + +R G
Sbjct: 102 AILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLV----LCIFASTDERRGDNL 157
Query: 190 LTNQVSPYVCVARKHG---HFGLVTKYPPPSEGPEQVRKKIS-RWKLAVGTTVGAAVGAF 245
+ +S V H +F + P S P V K W +G VGA +G+
Sbjct: 158 GSPALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSL 217
Query: 246 LLGLLLVAMFVKVKKK-ARMEELERRAYEEE 275
L LL ++++ A ++ LE EE
Sbjct: 218 LYNYLLFPSAKSLQERLAVLKGLEPDTDWEE 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,752,575
Number of Sequences: 539616
Number of extensions: 4534470
Number of successful extensions: 11378
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 11378
Number of HSP's gapped (non-prelim): 5
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)