Query 037942
Match_columns 369
No_of_seqs 205 out of 2051
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 05:56:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037942.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037942hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 6.7E-37 1.5E-41 284.8 30.6 318 4-330 9-334 (358)
2 PRK11272 putative DMT superfam 100.0 1.3E-32 2.8E-37 252.0 28.9 288 1-328 1-289 (292)
3 PRK11453 O-acetylserine/cystei 100.0 6E-32 1.3E-36 248.4 28.6 279 10-327 6-290 (299)
4 PRK10532 threonine and homoser 100.0 3.4E-31 7.3E-36 242.7 29.0 283 2-331 6-288 (293)
5 PRK15430 putative chlorampheni 100.0 2E-31 4.3E-36 244.6 25.6 282 1-325 1-286 (296)
6 PRK11689 aromatic amino acid e 100.0 2.3E-31 4.9E-36 244.0 25.5 285 6-327 2-290 (295)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 2.3E-30 5E-35 233.6 25.7 259 20-320 1-260 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 1.4E-28 3E-33 226.7 26.2 282 13-329 7-298 (302)
9 PF06027 DUF914: Eukaryotic pr 100.0 3.4E-27 7.3E-32 215.3 29.1 302 6-334 11-315 (334)
10 TIGR03340 phn_DUF6 phosphonate 100.0 2.9E-27 6.3E-32 215.5 26.2 274 10-321 3-280 (281)
11 PTZ00343 triose or hexose phos 100.0 4.4E-26 9.6E-31 213.2 27.2 284 6-325 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 1.9E-25 4E-30 201.0 24.2 248 8-299 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 3.6E-23 7.9E-28 189.4 29.0 284 4-325 3-288 (292)
14 COG2962 RarD Predicted permeas 99.9 6.2E-23 1.4E-27 178.3 23.8 282 4-328 3-287 (293)
15 COG5006 rhtA Threonine/homoser 99.9 3.7E-22 8E-27 168.9 24.3 274 9-328 13-286 (292)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 4.7E-21 1E-25 174.8 23.5 279 9-325 2-289 (290)
17 KOG4510 Permease of the drug/m 99.9 1.4E-23 3.1E-28 178.5 0.4 293 6-327 36-328 (346)
18 PF08449 UAA: UAA transporter 99.9 2.4E-19 5.3E-24 165.0 26.9 267 36-329 31-302 (303)
19 KOG2765 Predicted membrane pro 99.8 8.9E-19 1.9E-23 156.5 18.0 300 5-329 11-395 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 9.3E-19 2E-23 158.0 13.8 274 23-331 32-314 (316)
21 KOG1580 UDP-galactose transpor 99.7 2.9E-16 6.3E-21 131.7 16.8 260 37-326 53-315 (337)
22 KOG2234 Predicted UDP-galactos 99.7 8.1E-14 1.8E-18 125.2 28.2 299 8-329 15-327 (345)
23 KOG2766 Predicted membrane pro 99.7 2.6E-16 5.6E-21 133.6 10.5 281 7-324 17-299 (336)
24 KOG1581 UDP-galactose transpor 99.7 5.5E-15 1.2E-19 129.0 16.9 265 36-328 50-317 (327)
25 COG2510 Predicted membrane pro 99.7 5.3E-16 1.1E-20 118.0 9.2 134 9-150 4-138 (140)
26 KOG1443 Predicted integral mem 99.7 3.8E-14 8.2E-19 123.8 21.8 254 35-322 42-313 (349)
27 KOG1444 Nucleotide-sugar trans 99.6 1E-13 2.3E-18 122.7 23.7 292 7-333 11-309 (314)
28 PF04142 Nuc_sug_transp: Nucle 99.6 4.7E-14 1E-18 124.8 17.8 230 68-315 13-244 (244)
29 COG2510 Predicted membrane pro 99.5 2.7E-13 5.8E-18 103.3 13.6 136 186-324 4-139 (140)
30 PF00892 EamA: EamA-like trans 99.5 2.4E-14 5.2E-19 113.9 8.4 125 18-150 1-125 (126)
31 KOG1442 GDP-fucose transporter 99.5 2.3E-14 4.9E-19 123.1 8.4 270 37-337 61-340 (347)
32 PF00892 EamA: EamA-like trans 99.4 1E-12 2.2E-17 104.5 8.9 125 195-323 1-125 (126)
33 KOG3912 Predicted integral mem 99.4 2.1E-11 4.5E-16 105.4 14.4 283 18-324 13-334 (372)
34 PF06800 Sugar_transport: Suga 99.3 6.1E-10 1.3E-14 98.3 21.2 249 35-321 10-268 (269)
35 TIGR00950 2A78 Carboxylate/Ami 99.3 5.3E-11 1.1E-15 107.3 14.3 134 5-147 125-260 (260)
36 COG5070 VRG4 Nucleotide-sugar 99.3 2E-11 4.4E-16 102.0 10.2 271 27-329 25-301 (309)
37 KOG1583 UDP-N-acetylglucosamin 99.3 5.9E-11 1.3E-15 102.5 13.0 265 37-324 33-314 (330)
38 PF05653 Mg_trans_NIPA: Magnes 99.3 2.9E-10 6.2E-15 103.7 18.1 278 4-327 3-295 (300)
39 KOG4314 Predicted carbohydrate 99.2 4.5E-11 9.7E-16 98.1 9.6 212 84-328 64-280 (290)
40 PRK13499 rhamnose-proton sympo 99.2 4.4E-09 9.6E-14 96.6 23.7 301 5-326 4-343 (345)
41 KOG1582 UDP-galactose transpor 99.2 7.8E-10 1.7E-14 95.3 14.3 261 34-328 70-336 (367)
42 PF13536 EmrE: Multidrug resis 99.2 6.9E-11 1.5E-15 92.3 6.7 105 42-153 2-108 (113)
43 PRK10532 threonine and homoser 99.2 7.7E-10 1.7E-14 101.5 14.5 137 7-153 147-283 (293)
44 PF03151 TPT: Triose-phosphate 99.1 1.2E-09 2.7E-14 90.0 13.8 138 186-324 1-153 (153)
45 PRK11272 putative DMT superfam 99.1 1.2E-09 2.6E-14 100.2 13.5 137 7-151 149-285 (292)
46 PRK15430 putative chlorampheni 99.1 1.9E-09 4.1E-14 99.1 14.6 139 181-323 4-144 (296)
47 TIGR03340 phn_DUF6 phosphonate 99.1 2.7E-09 5.8E-14 97.4 14.4 134 187-325 3-136 (281)
48 PLN00411 nodulin MtN21 family 99.1 3.1E-09 6.7E-14 99.6 15.0 138 7-153 188-330 (358)
49 TIGR00688 rarD rarD protein. T 99.0 3.6E-09 7.9E-14 95.1 13.6 136 185-323 2-141 (256)
50 PRK11689 aromatic amino acid e 99.0 4.6E-09 1E-13 96.5 13.1 134 7-152 155-288 (295)
51 KOG2922 Uncharacterized conser 99.0 1.2E-09 2.7E-14 96.8 7.4 279 4-327 17-309 (335)
52 PRK11453 O-acetylserine/cystei 98.9 4.1E-08 8.9E-13 90.4 14.4 139 7-152 142-288 (299)
53 PRK02971 4-amino-4-deoxy-L-ara 98.9 8.2E-08 1.8E-12 76.1 13.3 122 185-327 2-125 (129)
54 TIGR00803 nst UDP-galactose tr 98.9 1.1E-08 2.4E-13 89.9 9.1 210 98-322 3-222 (222)
55 PF13536 EmrE: Multidrug resis 98.8 2.9E-08 6.3E-13 77.4 9.9 108 220-328 3-110 (113)
56 TIGR00817 tpt Tpt phosphate/ph 98.8 2E-08 4.3E-13 92.6 9.8 141 6-152 143-294 (302)
57 COG4975 GlcU Putative glucose 98.8 1.6E-09 3.4E-14 92.3 1.7 276 8-324 2-285 (288)
58 PF03151 TPT: Triose-phosphate 98.7 3.4E-07 7.3E-12 75.4 12.6 133 9-148 1-150 (153)
59 PTZ00343 triose or hexose phos 98.7 7.8E-07 1.7E-11 83.6 15.2 140 183-324 47-186 (350)
60 COG2962 RarD Predicted permeas 98.7 4.1E-07 8.8E-12 80.2 12.2 143 182-327 4-147 (293)
61 TIGR00776 RhaT RhaT L-rhamnose 98.6 5.8E-07 1.3E-11 82.2 12.7 129 7-151 151-288 (290)
62 PRK15051 4-amino-4-deoxy-L-ara 98.6 6.3E-07 1.4E-11 69.3 10.2 69 76-150 40-108 (111)
63 COG0697 RhaT Permeases of the 98.6 1.2E-06 2.7E-11 79.8 13.8 134 7-151 153-287 (292)
64 PRK15051 4-amino-4-deoxy-L-ara 98.5 7.8E-07 1.7E-11 68.8 9.8 67 257-323 42-108 (111)
65 PF06027 DUF914: Eukaryotic pr 98.4 2.9E-06 6.4E-11 78.2 11.7 141 5-153 165-307 (334)
66 PRK02971 4-amino-4-deoxy-L-ara 98.4 3.6E-06 7.8E-11 66.8 10.6 119 8-151 2-122 (129)
67 COG5006 rhtA Threonine/homoser 98.4 3.3E-06 7.1E-11 72.7 10.4 136 6-150 146-281 (292)
68 PRK10452 multidrug efflux syst 98.1 3.8E-05 8.3E-10 59.8 10.6 69 258-326 36-105 (120)
69 KOG4510 Permease of the drug/m 98.1 1.8E-06 3.9E-11 74.8 2.6 139 181-327 34-172 (346)
70 PF08449 UAA: UAA transporter 98.0 0.00018 4E-09 66.3 13.9 130 196-331 11-143 (303)
71 PRK09541 emrE multidrug efflux 97.9 5.8E-05 1.2E-09 58.0 7.5 68 259-326 37-105 (110)
72 PF06800 Sugar_transport: Suga 97.9 0.00018 3.9E-09 64.0 11.0 117 5-129 135-251 (269)
73 PF06379 RhaT: L-rhamnose-prot 97.8 0.0057 1.2E-07 55.8 20.5 301 5-325 4-341 (344)
74 PF04657 DUF606: Protein of un 97.8 0.00045 9.8E-09 55.6 12.0 132 186-321 2-138 (138)
75 PF05653 Mg_trans_NIPA: Magnes 97.7 0.00015 3.2E-09 66.4 8.9 121 181-326 3-124 (300)
76 COG3238 Uncharacterized protei 97.7 0.00068 1.5E-08 54.5 11.1 139 184-325 4-147 (150)
77 PRK10650 multidrug efflux syst 97.7 0.00048 1E-08 52.7 9.1 64 80-149 42-106 (109)
78 PRK10650 multidrug efflux syst 97.6 0.0013 2.8E-08 50.4 10.8 64 260-323 43-107 (109)
79 PRK11431 multidrug efflux syst 97.5 0.00041 9E-09 52.7 7.1 66 259-324 36-102 (105)
80 PF04657 DUF606: Protein of un 97.5 0.0013 2.9E-08 52.9 10.4 130 10-148 3-138 (138)
81 COG2076 EmrE Membrane transpor 97.5 0.00038 8.2E-09 52.4 6.6 66 261-326 39-105 (106)
82 PRK10452 multidrug efflux syst 97.4 0.0003 6.5E-09 54.8 5.5 68 78-151 35-103 (120)
83 PRK09541 emrE multidrug efflux 97.4 0.00036 7.7E-09 53.7 5.8 67 79-151 36-103 (110)
84 PF10639 UPF0546: Uncharacteri 97.4 0.00038 8.2E-09 53.4 5.5 110 14-149 2-112 (113)
85 COG2076 EmrE Membrane transpor 97.4 0.00038 8.2E-09 52.4 5.2 65 80-150 37-102 (106)
86 PRK11431 multidrug efflux syst 97.3 0.0017 3.7E-08 49.4 8.2 65 80-150 36-101 (105)
87 PF04142 Nuc_sug_transp: Nucle 97.3 0.0012 2.6E-08 58.6 8.4 77 252-329 18-94 (244)
88 KOG2765 Predicted membrane pro 97.3 0.0012 2.5E-08 60.5 7.9 143 5-153 244-392 (416)
89 PF07857 DUF1632: CEO family ( 97.2 0.0023 5E-08 56.7 9.5 191 9-210 1-208 (254)
90 KOG1441 Glucose-6-phosphate/ph 97.2 0.00068 1.5E-08 62.0 5.7 137 6-150 161-306 (316)
91 PF00893 Multi_Drug_Res: Small 97.1 0.0033 7.2E-08 46.9 8.0 56 260-315 37-93 (93)
92 PF07857 DUF1632: CEO family ( 97.0 0.0016 3.5E-08 57.7 6.4 132 186-329 1-139 (254)
93 KOG1581 UDP-galactose transpor 96.9 0.014 3.1E-07 52.1 11.4 140 5-152 169-314 (327)
94 PF00893 Multi_Drug_Res: Small 96.6 0.012 2.7E-07 43.8 7.6 56 80-141 36-92 (93)
95 PRK13499 rhamnose-proton sympo 96.5 0.085 1.8E-06 49.1 13.8 145 6-152 172-342 (345)
96 COG4975 GlcU Putative glucose 96.4 0.0029 6.2E-08 54.7 3.0 134 186-329 3-141 (288)
97 KOG2234 Predicted UDP-galactos 96.3 0.27 5.8E-06 45.3 15.6 142 185-327 15-167 (345)
98 PF10639 UPF0546: Uncharacteri 96.3 0.016 3.6E-07 44.4 6.5 109 192-322 3-112 (113)
99 TIGR00803 nst UDP-galactose tr 96.0 0.024 5.2E-07 49.6 7.4 59 84-148 163-221 (222)
100 COG3238 Uncharacterized protei 95.7 0.16 3.5E-06 41.0 10.2 137 7-150 4-145 (150)
101 KOG2922 Uncharacterized conser 95.6 0.0062 1.3E-07 54.9 1.8 126 180-329 16-141 (335)
102 KOG4314 Predicted carbohydrate 94.7 0.022 4.7E-07 47.7 2.4 65 264-328 65-129 (290)
103 KOG1444 Nucleotide-sugar trans 94.2 1 2.3E-05 40.9 12.0 135 186-324 13-149 (314)
104 KOG1580 UDP-galactose transpor 93.3 0.38 8.2E-06 41.6 7.1 137 7-151 171-313 (337)
105 KOG1442 GDP-fucose transporter 93.1 0.34 7.4E-06 42.9 6.7 144 6-156 183-332 (347)
106 KOG4831 Unnamed protein [Funct 92.2 0.44 9.4E-06 35.6 5.3 116 11-150 6-124 (125)
107 COG5070 VRG4 Nucleotide-sugar 91.9 0.59 1.3E-05 40.2 6.5 137 9-152 156-297 (309)
108 KOG1443 Predicted integral mem 91.7 2.1 4.5E-05 38.8 10.0 123 204-327 35-159 (349)
109 PF06379 RhaT: L-rhamnose-prot 91.7 1.3 2.8E-05 40.8 8.9 145 181-329 3-158 (344)
110 PF07168 Ureide_permease: Urei 89.5 0.19 4.1E-06 45.2 1.5 131 191-324 2-146 (336)
111 PRK02237 hypothetical protein; 88.8 2.3 5E-05 32.1 6.7 47 281-327 62-108 (109)
112 PF02694 UPF0060: Uncharacteri 87.1 1.1 2.4E-05 33.7 4.1 46 282-327 61-106 (107)
113 KOG1582 UDP-galactose transpor 86.5 4.1 8.8E-05 36.3 7.8 140 6-153 188-334 (367)
114 KOG3912 Predicted integral mem 85.9 1.4 3.1E-05 39.2 4.8 65 261-325 95-159 (372)
115 PF07168 Ureide_permease: Urei 85.8 0.84 1.8E-05 41.2 3.4 129 13-148 1-143 (336)
116 KOG2766 Predicted membrane pro 81.6 0.41 8.8E-06 42.0 -0.3 142 180-329 13-155 (336)
117 PRK02237 hypothetical protein; 81.0 10 0.00022 28.8 6.9 40 106-151 66-105 (109)
118 PF06570 DUF1129: Protein of u 77.9 44 0.00096 28.7 11.9 31 71-102 145-175 (206)
119 PF02694 UPF0060: Uncharacteri 77.3 8.7 0.00019 29.0 5.6 52 94-151 51-103 (107)
120 PRK06638 NADH:ubiquinone oxido 77.2 46 0.00099 28.5 11.7 34 293-326 133-166 (198)
121 KOG4831 Unnamed protein [Funct 76.7 8.9 0.00019 28.8 5.4 60 264-323 64-124 (125)
122 COG1742 Uncharacterized conser 76.4 9.7 0.00021 28.6 5.5 47 281-327 61-107 (109)
123 PF04342 DUF486: Protein of un 72.5 23 0.0005 26.7 6.7 32 111-148 74-105 (108)
124 PF05297 Herpes_LMP1: Herpesvi 68.9 1.6 3.4E-05 38.9 0.0 13 181-193 103-115 (381)
125 KOG1583 UDP-N-acetylglucosamin 67.0 28 0.0006 31.4 7.2 135 6-151 162-314 (330)
126 PF04342 DUF486: Protein of un 65.3 8.3 0.00018 29.0 3.1 30 293-322 77-106 (108)
127 COG3169 Uncharacterized protei 63.9 18 0.00039 26.8 4.6 32 292-323 83-114 (116)
128 PF08507 COPI_assoc: COPI asso 62.2 10 0.00023 30.2 3.6 17 307-323 88-104 (136)
129 PRK13108 prolipoprotein diacyl 58.6 50 0.0011 32.3 8.0 25 304-328 254-278 (460)
130 COG1742 Uncharacterized conser 57.3 26 0.00056 26.3 4.5 40 106-151 65-104 (109)
131 COG4657 RnfA Predicted NADH:ub 55.6 73 0.0016 26.2 7.1 50 181-230 128-182 (193)
132 PF15102 TMEM154: TMEM154 prot 54.4 17 0.00037 29.2 3.4 24 310-333 67-90 (146)
133 PF05977 MFS_3: Transmembrane 54.1 2.4E+02 0.0052 28.2 19.5 40 283-322 351-391 (524)
134 PF03595 SLAC1: Voltage-depend 47.3 2.1E+02 0.0045 26.4 10.2 76 136-233 7-90 (330)
135 PF03348 Serinc: Serine incorp 46.2 2.9E+02 0.0063 26.9 23.9 59 257-328 249-307 (429)
136 PF05297 Herpes_LMP1: Herpesvi 44.6 7.6 0.00016 34.7 0.1 24 263-286 119-142 (381)
137 PF01102 Glycophorin_A: Glycop 43.5 20 0.00044 28.0 2.3 14 310-323 75-88 (122)
138 COG3086 RseC Positive regulato 40.0 20 0.00044 28.7 1.8 28 273-300 69-96 (150)
139 PF15471 TMEM171: Transmembran 38.3 42 0.0009 29.9 3.6 23 306-328 161-183 (319)
140 PF11381 DUF3185: Protein of u 37.5 35 0.00076 22.9 2.4 18 135-152 1-18 (59)
141 PHA03049 IMV membrane protein; 36.6 37 0.0008 23.1 2.4 19 309-327 7-25 (68)
142 PF14851 FAM176: FAM176 family 36.3 59 0.0013 26.5 4.0 28 268-295 9-36 (153)
143 PF05961 Chordopox_A13L: Chord 36.0 38 0.00083 23.2 2.4 21 308-328 6-26 (68)
144 COG3169 Uncharacterized protei 35.0 1.9E+02 0.0042 21.6 8.2 32 113-150 83-114 (116)
145 PF14851 FAM176: FAM176 family 34.9 1.2E+02 0.0025 24.9 5.5 12 310-321 32-43 (153)
146 PF10225 DUF2215: Uncharacteri 32.8 3.6E+02 0.0077 24.0 11.1 37 272-308 115-151 (249)
147 PF10754 DUF2569: Protein of u 30.2 2E+02 0.0044 23.2 6.3 31 180-210 116-146 (149)
148 PF15345 TMEM51: Transmembrane 30.1 26 0.00056 30.5 1.1 24 309-332 66-89 (233)
149 TIGR02865 spore_II_E stage II 29.1 7.1E+02 0.015 26.3 14.7 44 100-149 11-54 (764)
150 PRK14397 membrane protein; Pro 28.4 54 0.0012 28.6 2.7 10 186-195 49-58 (222)
151 MTH00057 ND6 NADH dehydrogenas 28.4 3.6E+02 0.0079 22.7 10.7 34 293-326 132-165 (186)
152 COG5336 Uncharacterized protei 27.0 1.2E+02 0.0026 23.1 3.9 11 289-299 56-66 (116)
153 PF08693 SKG6: Transmembrane a 26.9 62 0.0013 19.8 2.0 19 310-328 21-39 (40)
154 PF04246 RseC_MucC: Positive r 26.8 33 0.00071 27.2 1.1 20 280-299 69-88 (135)
155 TIGR00836 amt ammonium transpo 26.3 5.9E+02 0.013 24.5 13.7 286 34-356 89-402 (403)
156 PRK10435 cadB lysine/cadaverin 24.4 6.4E+02 0.014 24.2 10.3 42 287-330 388-429 (435)
157 PF15099 PIRT: Phosphoinositid 23.8 25 0.00055 27.4 -0.1 17 252-268 57-73 (129)
158 KOG1289 Amino acid transporter 23.7 6.6E+02 0.014 25.2 9.4 22 301-322 485-506 (550)
159 PF13127 DUF3955: Protein of u 23.6 2.4E+02 0.0053 19.1 5.0 32 4-35 2-33 (63)
160 COG3965 Predicted Co/Zn/Cd cat 23.0 5.6E+02 0.012 23.1 11.3 109 15-125 101-213 (314)
161 PRK06638 NADH:ubiquinone oxido 22.5 4.5E+02 0.0098 22.4 7.3 28 31-59 51-78 (198)
162 PF06645 SPC12: Microsomal sig 22.4 1.5E+02 0.0033 20.9 3.7 42 287-328 19-60 (76)
163 COG4858 Uncharacterized membra 22.3 4.9E+02 0.011 22.1 9.9 112 10-128 102-219 (226)
164 PRK11010 ampG muropeptide tran 22.3 7.5E+02 0.016 24.2 13.1 18 307-324 384-401 (491)
165 PLN00028 nitrate transmembrane 22.2 7.3E+02 0.016 24.1 11.8 15 309-323 417-431 (476)
166 PF09656 PGPGW: Putative trans 22.0 1.7E+02 0.0037 19.1 3.5 44 136-210 6-49 (53)
167 PF07698 7TM-7TMR_HD: 7TM rece 21.5 4.8E+02 0.01 21.7 16.6 36 199-235 116-151 (194)
168 PRK12585 putative monovalent c 21.5 4.7E+02 0.01 22.3 6.8 18 181-198 42-59 (197)
169 PF04018 DUF368: Domain of unk 21.4 5.3E+02 0.012 23.1 7.8 19 185-203 140-158 (257)
170 PF06166 DUF979: Protein of un 21.3 6.5E+02 0.014 23.1 9.1 15 136-150 52-66 (308)
171 PF06609 TRI12: Fungal trichot 21.0 9.1E+02 0.02 24.7 19.5 19 186-204 408-426 (599)
172 PRK10666 ammonium transporter; 21.0 7.8E+02 0.017 23.9 18.0 22 75-96 222-243 (428)
173 TIGR01167 LPXTG_anchor LPXTG-m 20.9 1.4E+02 0.0029 16.9 2.7 16 305-320 11-26 (34)
174 PF06946 Phage_holin_5: Phage 20.3 3.7E+02 0.0079 19.9 6.1 59 270-328 22-84 (93)
175 PF11361 DUF3159: Protein of u 20.2 2.2E+02 0.0049 24.1 4.9 73 101-204 28-100 (187)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=6.7e-37 Score=284.83 Aligned_cols=318 Identities=29% Similarity=0.568 Sum_probs=249.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHhh
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK-TRPKITWPILFQIFLCSVTG 82 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 82 (369)
.++.+.+..+++..+.++...++.|.+.+.|++|..+.++|+.+++++++++++.++++ ++++.+++++..+.+.|+++
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999998776542 33445688889999999998
Q ss_pred hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHh------hhccccccccCCccceehhhhhhhhhhhhhhhcCcc
Q 037942 83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIF------RQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKT 156 (369)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~ 156 (369)
...+.+++.+++|++++.++++.++.|+++.++++++ +|||+++++ ++|++++++|+.++..++++.
T Consensus 89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcc
Confidence 7788899999999999999999999999999999999 477777776 999999999999988654432
Q ss_pred ccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh
Q 037942 157 FGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV 236 (369)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 236 (369)
....++..+....+.. ........+...|+++++.++++|++|++++|+..++++++...++++...+.+.+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~ 240 (358)
T PLN00411 162 VFVASSPPYLNFRQLS-PPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVV 240 (358)
T ss_pred cccccccccccccccc-cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1000000000000000 000011223356999999999999999999999988877766777788877777766666554
Q ss_pred cc-cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHH
Q 037942 237 ER-KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLI 315 (369)
Q Consensus 237 ~~-~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li 315 (369)
++ +...|..........+++.++. +.++|.+|++++++.+|++++++.+++|+++.+++++++||++++.+++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LI 319 (358)
T PLN00411 241 EKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILI 319 (358)
T ss_pred ccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 43 2233322222234557777765 568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhheecCCCCC
Q 037942 316 VTGLYAVLWGKDKEL 330 (369)
Q Consensus 316 ~~gv~l~~~~~~~~~ 330 (369)
+.|+++..+.++++.
T Consensus 320 l~Gv~l~~~~~~~~~ 334 (358)
T PLN00411 320 TLGFYAVMWGKANEE 334 (358)
T ss_pred HHHHHHHHhhhhhhh
Confidence 999999987665543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=252.02 Aligned_cols=288 Identities=16% Similarity=0.173 Sum_probs=238.1
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 037942 1 MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSV 80 (369)
Q Consensus 1 m~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 80 (369)
|+..+-..-++..++..++||.++++.|...++ ++|..++++|+.+++++++++...+++ + ..+++++......|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~--~-~~~~~~~~~~~~~g~ 76 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGH--P-LPTLRQWLNAALIGL 76 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCC--C-CCcHHHHHHHHHHHH
Confidence 443333445677889999999999999998885 999999999999999999888655322 2 235678888888898
Q ss_pred hhhHHHHHHHHHHh-cccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccC
Q 037942 81 TGATGNQVLYFVGL-ENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGI 159 (369)
Q Consensus 81 ~~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~ 159 (369)
++...++.+++.+. ++++++.++++.++.|+++.+++.+ +|||+++++ ++|++++++|+.++...+ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~--~--- 144 (292)
T PRK11272 77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGG--N--- 144 (292)
T ss_pred HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCc--c---
Confidence 87678888999999 9999999999999999999999986 699999998 999999999999886321 1
Q ss_pred CCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccc
Q 037942 160 PNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERK 239 (369)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (369)
.+....|++++++++++|+.+.+..|+..++ ++.....++...+.+.+.+.....+.+
T Consensus 145 --------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (292)
T PRK11272 145 --------------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGER 202 (292)
T ss_pred --------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 1233579999999999999999999997643 335566788888877777766544332
Q ss_pred ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942 240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL 319 (369)
Q Consensus 240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv 319 (369)
.. ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 203 ~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv 280 (292)
T PRK11272 203 LT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAV 280 (292)
T ss_pred cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 21 1123346889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheecCCC
Q 037942 320 YAVLWGKDK 328 (369)
Q Consensus 320 ~l~~~~~~~ 328 (369)
++..+.+++
T Consensus 281 ~~~~~~~~~ 289 (292)
T PRK11272 281 VLVTLGKYL 289 (292)
T ss_pred HHHHHHHhh
Confidence 998765543
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=6e-32 Score=248.44 Aligned_cols=279 Identities=21% Similarity=0.242 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHH
Q 037942 10 FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVL 89 (369)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (369)
.++.++++++||.+++++|...++ ++|.++.++|+.++++.++++.. ++ +.++ ......|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHHH
Confidence 466889999999999999999886 99999999999998776655431 11 1122 23444455554556667
Q ss_pred HHHHhcc-cchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942 90 YFVGLEN-STPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY 168 (369)
Q Consensus 90 ~~~al~~-~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 168 (369)
++.++++ .+++.++++.++.|+++.+++++++|||+++++ +++++++++|+.++...+ .+
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~-~~------------ 136 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDS-LN------------ 136 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcccc-CC------------
Confidence 7889998 588999999999999999999999999999998 999999999999987321 11
Q ss_pred hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCc--hHHHHHHHHHHHHHHHHHHHHhcccc---ccc
Q 037942 169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAP--YTCTTLMCLISSIMCSVIGLIVERKR---AAW 243 (369)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~ 243 (369)
....+..|+++++.++++|++|.++.|+..++.+++ .....+....+.+.........+.+. ..+
T Consensus 137 ----------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (299)
T PRK11453 137 ----------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL 206 (299)
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence 112235799999999999999999999987653332 23444555555444433333333211 112
Q ss_pred ccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 244 ~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++..
T Consensus 207 ~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 207 VTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 22234478999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ecCC
Q 037942 324 WGKD 327 (369)
Q Consensus 324 ~~~~ 327 (369)
+.++
T Consensus 287 ~~~~ 290 (299)
T PRK11453 287 FGLR 290 (299)
T ss_pred cchh
Confidence 7664
No 4
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=3.4e-31 Score=242.68 Aligned_cols=283 Identities=15% Similarity=0.169 Sum_probs=226.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHh
Q 037942 2 RMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVT 81 (369)
Q Consensus 2 ~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 81 (369)
++.++.+++.+++++.++|+.++++.|+..++ ++|..+.++|+++++++++++... ++ ++.+++++...+..|.+
T Consensus 6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~ 80 (293)
T PRK10532 6 RKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVS 80 (293)
T ss_pred cccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999997 999999999999999988876432 12 13456788888888887
Q ss_pred hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942 82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN 161 (369)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 161 (369)
. ...+.+++++++++|++.++++..+.|+++.+++ +|++.+ ..++.++++|+.++...+ .+
T Consensus 81 ~-~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--------~~~~~i~~~Gv~li~~~~-~~----- 141 (293)
T PRK10532 81 L-GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--------FVWVVLAVLGLWFLLPLG-QD----- 141 (293)
T ss_pred H-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--------HHHHHHHHHHHheeeecC-CC-----
Confidence 6 7888899999999999999999999999999886 344432 456778899998876321 11
Q ss_pred CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942 162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (369)
....+..|++++++++++|++|.+..|+..++. ++... .+....+.+.+.+.....+.+
T Consensus 142 -----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~-- 200 (293)
T PRK10532 142 -----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE-- 200 (293)
T ss_pred -----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc--
Confidence 112345799999999999999999999987663 44554 455566666666665543221
Q ss_pred ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA 321 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l 321 (369)
.. .+...|..++++|++++.++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|++++++|++.
T Consensus 201 -~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~ 278 (293)
T PRK10532 201 -AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMG 278 (293)
T ss_pred -cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 11 1222466677999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heecCCCCCC
Q 037942 322 VLWGKDKELK 331 (369)
Q Consensus 322 ~~~~~~~~~~ 331 (369)
..+.++|+.|
T Consensus 279 ~~~~~~~~~~ 288 (293)
T PRK10532 279 STLTIRREPK 288 (293)
T ss_pred HHhcCCCCCC
Confidence 9776655443
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=2e-31 Score=244.55 Aligned_cols=282 Identities=14% Similarity=0.114 Sum_probs=212.4
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC--CC-CCHHHHHHHHH
Q 037942 1 MRMLDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR--PK-ITWPILFQIFL 77 (369)
Q Consensus 1 m~~~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~ 77 (369)
|+|+++.+|.+++++++++||..+++.|.. ++ ++|.++.++|+.++.++++++...+++++. ++ .+++++.. ..
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence 788899999999999999999999999975 54 999999999999999888777654321110 00 12344333 33
Q ss_pred HHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942 78 CSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTF 157 (369)
Q Consensus 78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~ 157 (369)
.+.++.+.++.++++|++++|++.++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~--- 148 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG--- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence 5666668899999999999999999999999999999999999999999999 9999999999999873211
Q ss_pred cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHh
Q 037942 158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIV 236 (369)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 236 (369)
+. ..++++++++|+.|.+..|+...+.. +......+....+.....+. .
T Consensus 149 -----------------------~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 198 (296)
T PRK15430 149 -----------------------SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A 198 (296)
T ss_pred -----------------------Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence 11 14678899999999999999754311 11222333333333322111 1
Q ss_pred cccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHH
Q 037942 237 ERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIV 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~ 316 (369)
......+...+...+..+...++ .+.+++.+|++++++.+++.++++.+++|+++.+++++++||++++.+++|+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~ 277 (296)
T PRK15430 199 DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW 277 (296)
T ss_pred cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 11111111111112333444454 67799999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheec
Q 037942 317 TGLYAVLWG 325 (369)
Q Consensus 317 ~gv~l~~~~ 325 (369)
+|+.+....
T Consensus 278 ~~~~v~~~~ 286 (296)
T PRK15430 278 VALAIFVMD 286 (296)
T ss_pred HHHHHHHHH
Confidence 888777544
No 6
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=2.3e-31 Score=244.05 Aligned_cols=285 Identities=12% Similarity=0.076 Sum_probs=215.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG 85 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (369)
+.+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++.. +++. + +.+++..+.+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~-~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---R-QFPKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---c-cccHHHHHHHhHHHHH
Confidence 4567889999999999999999999886 99999999999999999887631 1111 1 1122234445555577
Q ss_pred HHHHHHHHhcc----cchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942 86 NQVLYFVGLEN----STPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN 161 (369)
Q Consensus 86 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 161 (369)
++.+++.++++ .+++.++++.++.|+++.+++++++|||+++++ ++|++++++|+.++..++ ...+.
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~-~~~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGD-NGLSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCC-ccchh--
Confidence 88888887754 577888999999999999999999999999998 999999999999988432 11000
Q ss_pred CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942 162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (369)
.+...+......|+++++++++||+.|.++.|+..++. ++..... ..+.+.+.+.....+...
T Consensus 145 ------------~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~- 207 (295)
T PRK11689 145 ------------AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPA- 207 (295)
T ss_pred ------------hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcc-
Confidence 00000112335699999999999999999999987664 4444322 223333333233222111
Q ss_pred ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA 321 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l 321 (369)
... +...|..+++.+ +++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus 208 -~~~-~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~ 284 (295)
T PRK11689 208 -MVF-SLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL 284 (295)
T ss_pred -ccC-CHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence 111 223577777777 47899999999999999999999999999999999999999999999999999999999988
Q ss_pred heecCC
Q 037942 322 VLWGKD 327 (369)
Q Consensus 322 ~~~~~~ 327 (369)
..+.++
T Consensus 285 ~~~~~~ 290 (295)
T PRK11689 285 CWLATR 290 (295)
T ss_pred HhhhHh
Confidence 866544
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.98 E-value=2.3e-30 Score=233.63 Aligned_cols=259 Identities=19% Similarity=0.220 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccch
Q 037942 20 YAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTP 99 (369)
Q Consensus 20 ~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 99 (369)
||.+++..|...+++.++....+.|++.+.+++.++...+ .+++++.+....|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999887668999999999999988887764332 245677788888888889999999999999999
Q ss_pred hhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCC
Q 037942 100 TIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGN 179 (369)
Q Consensus 100 ~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
++++++.++.|+++.+++.+++|||+++++ ++|++++++|+.++... + .
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~-~-~----------------------- 122 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSD-G-N----------------------- 122 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccC-C-c-----------------------
Confidence 999999999999999999999999999998 99999999999998632 1 1
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHH
Q 037942 180 KSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSG 258 (369)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 258 (369)
.+.+..|+.++++++++|+.+.+..|+..++.+ ++.....+.+..+.+.+.+.....++.. .. +...|..+++.+
T Consensus 123 ~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~ 198 (260)
T TIGR00950 123 LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG 198 (260)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence 134578999999999999999999999987643 2345555778888888877776543322 11 333677788899
Q ss_pred HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHh
Q 037942 259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLY 320 (369)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~ 320 (369)
++++.+++.++++++++.++++++.+.+++|+++.+++++++||+++..+++|.++++.|+.
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999863
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=1.4e-28 Score=226.65 Aligned_cols=282 Identities=17% Similarity=0.117 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHH
Q 037942 13 MVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFV 92 (369)
Q Consensus 13 ~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (369)
..+..++-....+..|...++-..|..+++.|+.++.+.+.+.... ..+++++.+++++++.+..|++. +.++.+.+.
T Consensus 7 ~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~ 84 (302)
T TIGR00817 7 FGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRLKISSALLKLLLPVAIVH-TIGHVTSNV 84 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3333444444556789888852559999999999988776655221 12333457789999999999997 888999999
Q ss_pred HhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcc
Q 037942 93 GLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKM 172 (369)
Q Consensus 93 al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
+++|++++.++++.++.|+++++++++++|||+++++ ++|++++++|+.+... + +
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~-~---------------- 139 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--T-E---------------- 139 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--C-c----------------
Confidence 9999999999999999999999999999999999998 9999999999987641 1 1
Q ss_pred cccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhh--hCCCchHHHHHHHHHHHHHHHHHHHHhccccc---cccc--
Q 037942 173 SEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSK--KFPAPYTCTTLMCLISSIMCSVIGLIVERKRA---AWKL-- 245 (369)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~-- 245 (369)
.+.+..|++++++++++|+++.+..|+..+ + .++...+.+++..+.+.++|.....+.... .+..
T Consensus 140 -------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~ 211 (302)
T TIGR00817 140 -------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI 211 (302)
T ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence 123467999999999999999999999877 4 366899999999999998888775543110 0100
Q ss_pred ---chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 246 ---NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 246 ---~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
.....+...+..+..+....+.++++++++.++++.++..+++|+++++++++++||+++..+++|.++++.|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 00111221222233233333346668999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCC
Q 037942 323 LWGKDKE 329 (369)
Q Consensus 323 ~~~~~~~ 329 (369)
.+.|.++
T Consensus 292 ~~~k~~~ 298 (302)
T TIGR00817 292 SRVKAQK 298 (302)
T ss_pred HHHhccC
Confidence 8765443
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=3.4e-27 Score=215.28 Aligned_cols=302 Identities=17% Similarity=0.200 Sum_probs=239.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHhhh
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWK-TRPKITWPILFQIFLCSVTGA 83 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 83 (369)
..+..++.=..+++-..+...+....+.|.+ |....+.-++.-.++..++..+++++ ++.+..+++|+++++.+++-
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D- 89 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD- 89 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence 3455666667778888888888887776776 88888888888777777766664432 22233457788888899998
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS 163 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 163 (369)
+.++++.+.|++|++.+.++++.++..+++++++++++|+|+++.+ ++|+++|++|+.++...+...
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~------- 156 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLS------- 156 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccc-------
Confidence 8999999999999999999999999999999999999999999999 999999999999998654322
Q ss_pred cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccc-ccc
Q 037942 164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERK-RAA 242 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~ 242 (369)
++.+.+..+...|+++++.++++||+++++.++..++. +......+..+.+.++..+.....|.+ ...
T Consensus 157 ----------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~ 225 (334)
T PF06027_consen 157 ----------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIES 225 (334)
T ss_pred ----------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhc
Confidence 11123456789999999999999999999999999884 567788888888888887777666652 222
Q ss_pred cccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 243 WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 243 ~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
..+.+. .+. +.....++...-|.+....++..+|+..++-..+..+.+++++++++|+++++..++|.++|++|.+++
T Consensus 226 ~~w~~~-~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 226 IHWTSQ-VIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY 303 (334)
T ss_pred cCCChh-hHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence 222222 222 323233455667778888999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCC
Q 037942 323 LWGKDKELKPDN 334 (369)
Q Consensus 323 ~~~~~~~~~~~~ 334 (369)
+..+++.+++++
T Consensus 304 ~~~~~~~~~~~~ 315 (334)
T PF06027_consen 304 NLAESPEEEARR 315 (334)
T ss_pred EccCCcccccch
Confidence 887766544443
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=2.9e-27 Score=215.54 Aligned_cols=274 Identities=14% Similarity=0.164 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 10 FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIE-WKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
+++.++++++|+..++..|...++ -++. .+++...+.+++.++...+. ++.++..+ +++......+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence 567899999999999999966554 4443 47777777777777766532 22233233 3444444445555589999
Q ss_pred HHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942 89 LYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY 168 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 168 (369)
+++.|+++.+++.++++.++.|+++.+++++++|||+++++ ++|+.+++.|+.++...+ .
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~--~------------ 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR--F------------ 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc--c------------
Confidence 99999999999999999999999999999999999999999 999999999999887321 1
Q ss_pred hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchH---HHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942 169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYT---CTTLMCLISSIMCSVIGLIVERKRAAWKL 245 (369)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (369)
...+..|+.++++++++|++|.+..|+..++.++... ...+......+...+.....+.. .+..
T Consensus 139 -----------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 205 (281)
T TIGR03340 139 -----------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMFP 205 (281)
T ss_pred -----------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chhh
Confidence 1123468889999999999999998886544222111 22222222211111111111111 1111
Q ss_pred chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942 246 NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA 321 (369)
Q Consensus 246 ~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l 321 (369)
....++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus 206 -~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 206 -YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 222456777888888999999999999999999999999999999999999999999999999999999999875
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=4.4e-26 Score=213.21 Aligned_cols=284 Identities=15% Similarity=0.148 Sum_probs=221.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHhh
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKI--TWPILFQIFLCSVTG 82 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 82 (369)
+.+...+.+..-.+-....+..|..++. ++ |..++++|++++.+++.++.... .+++++. .+++++..+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 3455556666666666677888999886 99 99999999999988765553322 2222333 345788899999999
Q ss_pred hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCC
Q 037942 83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS 162 (369)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 162 (369)
. ..+...+.|+++++++.++++..+.|+++++++++++|||+++++ ++++++++.|+.+.+.. +
T Consensus 125 ~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~---~------ 188 (350)
T PTZ00343 125 L-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVK---E------ 188 (350)
T ss_pred H-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheecc---c------
Confidence 4 446667899999999999999999999999999999999999998 99999999999998731 1
Q ss_pred CcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC------CchHHHHHHHHHHHHHHHHHHHHh
Q 037942 163 SIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP------APYTCTTLMCLISSIMCSVIGLIV 236 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~ 236 (369)
.+.+..|++++++|+++++++.++.|+..++.+ ++.....+..+.+.++++|+....
T Consensus 189 -----------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~ 251 (350)
T PTZ00343 189 -----------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF 251 (350)
T ss_pred -----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133467999999999999999999999876532 344456666888888888887755
Q ss_pred ccc--ccccc----cchhhHHHHHHHHHHHHhHHHHHHHHH----HHhccCcceeeehhhHHHHHHHHHHHHHhcCccch
Q 037942 237 ERK--RAAWK----LNATIRLVSALYSGIVCSALAFCLIVW----SIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFI 306 (369)
Q Consensus 237 ~~~--~~~~~----~~~~~~~~~l~~~gi~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~ 306 (369)
+.. ...+. ......+..+++ .++.+++.+++++. +++++++.+.++..+++|+++++++++++||++++
T Consensus 252 e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~ 330 (350)
T PTZ00343 252 EGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL 330 (350)
T ss_pred hhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCch
Confidence 431 11110 000111223333 34567888888885 99999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhheec
Q 037942 307 GTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 307 ~~~~G~~li~~gv~l~~~~ 325 (369)
.+++|.++++.|++++++.
T Consensus 331 ~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 331 LGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HhHHHHHHHHHHHHHHhhc
Confidence 9999999999999998764
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.9e-25 Score=201.04 Aligned_cols=248 Identities=14% Similarity=0.103 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHH-HHHHHHHHHh
Q 037942 8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK-----TRPKITWPI-LFQIFLCSVT 81 (369)
Q Consensus 8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 81 (369)
+|++++++++++||.++++.|. .++ ++|.+++++|++++.+++.++...++++ +.++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 454 9999999999999998887765443221 111122333 3345666666
Q ss_pred hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942 82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN 161 (369)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 161 (369)
. ..++.+++.|++++++++++++.++.|+++++++++++|||+++++ +++++++++|+.++..+++
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 5 8999999999999999999999999999999999999999999998 9999999999998863211
Q ss_pred CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccc
Q 037942 162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRA 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (369)
+.. .+++.++++|+.|.+..|+..++ +. ....... ........+.... .....
T Consensus 146 -------------------~~~----~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~-~~~~~ 198 (256)
T TIGR00688 146 -------------------SLP----WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLET-LSLMPVAIYYLLQ-TDFAT 198 (256)
T ss_pred -------------------Cch----HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHHH-HHHHHHHHHHHHH-hccCc
Confidence 111 35788999999999999997643 22 2222111 1111111111111 11110
Q ss_pred ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHH
Q 037942 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 299 (369)
....++...|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus 199 ~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 199 VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 0111122267777787875 78999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=3.6e-23 Score=189.36 Aligned_cols=284 Identities=21% Similarity=0.304 Sum_probs=219.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhh
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGA 83 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 83 (369)
++...+..+.++..+.|+......|...++..++....+.|...+.+...+.....+ .... ...+.+....+.+.+..
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 80 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP-RGLR-PALRPWLLLLLLALLGL 80 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-cccc-ccccchHHHHHHHHHHH
Confidence 345678888999999999999999988774366677777799998888443322211 1111 12222556666777777
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHH-HhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCC
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAV-IFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNS 162 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 162 (369)
...+.+++.++++++++.++++.++.|+++.+++. +++|||+++++ +.++++++.|+.++...+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~------ 148 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGG------ 148 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcc------
Confidence 99999999999999999999999999999999997 77799999998 999999999999998532211
Q ss_pred CcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHH-HHHHHHHHHHHHHHHHhccccc
Q 037942 163 SIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTT-LMCLISSIMCSVIGLIVERKRA 241 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 241 (369)
... ...|+.+++.++++++++.+..|+.. + .++..... +..........+... .+.+
T Consensus 149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 206 (292)
T COG0697 149 ----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG-- 206 (292)
T ss_pred ----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--
Confidence 001 57999999999999999999999987 3 24344444 333311122112111 1111
Q ss_pred ccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhh
Q 037942 242 AWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYA 321 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l 321 (369)
.......+..+.+.|++++.+++.++.+++++.++...+++.+++|+++.++++++++|+++..+++|+++++.|+.+
T Consensus 207 --~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l 284 (292)
T COG0697 207 --APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL 284 (292)
T ss_pred --ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 112233688888889998889999999999999999999999999999999999999999999999999999999998
Q ss_pred heec
Q 037942 322 VLWG 325 (369)
Q Consensus 322 ~~~~ 325 (369)
...+
T Consensus 285 ~~~~ 288 (292)
T COG0697 285 ASLR 288 (292)
T ss_pred Hhcc
Confidence 8766
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.92 E-value=6.2e-23 Score=178.33 Aligned_cols=282 Identities=13% Similarity=0.113 Sum_probs=225.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC-C--CCCHHHHHHHHHHHH
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTR-P--KITWPILFQIFLCSV 80 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~ 80 (369)
++..+|+++.+.+.++||..+.+.|.. +. .++.++...|.+-+.++++.+....++.+. . ..+++.+....+.+.
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL 80 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence 567899999999999999999999974 54 999999999999998888777665432211 1 124566666677777
Q ss_pred hhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCC
Q 037942 81 TGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIP 160 (369)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 160 (369)
+. ..++..|.+|.++..+-++++-++.+|++.++++.+++|||+++.| ++++.++.+||....+..|.
T Consensus 81 li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~----- 148 (293)
T COG2962 81 LI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS----- 148 (293)
T ss_pred HH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-----
Confidence 66 9999999999999999999999999999999999999999999999 99999999999999865432
Q ss_pred CCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccc
Q 037942 161 NSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR 240 (369)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (369)
-++ .++.=+++|+.|...-|+..- |+.+-.....+.-....+.+.+..+...
T Consensus 149 ---------------------lpw----val~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~~~~ 200 (293)
T COG2962 149 ---------------------LPW----VALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLADSG 200 (293)
T ss_pred ---------------------CcH----HHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHhcCc
Confidence 222 345567889999998777632 3456556666665555555555443322
Q ss_pred cccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHh
Q 037942 241 AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLY 320 (369)
Q Consensus 241 ~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~ 320 (369)
+.....+...+..+...|. .+.++..++..+.++.+-+..+.++|++|..-.+++++++||+++..+++..++|.+|..
T Consensus 201 ~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~ 279 (293)
T COG2962 201 QFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA 279 (293)
T ss_pred hhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 1122133446677777777 478999999999999999999999999999999999999999999999999999999999
Q ss_pred hheecCCC
Q 037942 321 AVLWGKDK 328 (369)
Q Consensus 321 l~~~~~~~ 328 (369)
++.+...+
T Consensus 280 l~~~d~l~ 287 (293)
T COG2962 280 LFSIDGLY 287 (293)
T ss_pred HHHHHHHH
Confidence 99776544
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=3.7e-22 Score=168.88 Aligned_cols=274 Identities=15% Similarity=0.185 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
+++.++.+++..=....+.|...+. +.+.-.+.+|..++.++++++.+-. + .+.++++|......|+.. ...|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw--r--~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW--R--RRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH--H--hccChhhhHHHHHHHHHH-HHHHH
Confidence 4788888888888888899999997 9999999999999999998874432 2 346788999999999988 89999
Q ss_pred HHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhh
Q 037942 89 LYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKY 168 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 168 (369)
+||.+++.+|.+.+..+-++.|+.+.+++. +| .++ .+-+.+++.|+.++.-. +..
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p~-~~~------------ 141 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLPL-GQS------------ 141 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhheec-cCC------------
Confidence 999999999999999999999999888762 11 122 66777888999888732 221
Q ss_pred hhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchh
Q 037942 169 AEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNAT 248 (369)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 248 (369)
....+..|..+++.++.||+.|.+..||..+. .+...-+...+.++.++.+|+......+ ...++
T Consensus 142 ----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p 206 (292)
T COG5006 142 ----------VWSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSP 206 (292)
T ss_pred ----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch----hhcCh
Confidence 24677899999999999999999999998764 3457788888999999999998843321 11122
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 249 IRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 249 ~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
......+.++++++.+.|.+-..++++.+....+.+..+||.++.+.+++++||.+|+.||.|+..++.+..-..+..+|
T Consensus 207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 25566777899999999999999999999999999999999999999999999999999999999999998766655444
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=4.7e-21 Score=174.83 Aligned_cols=279 Identities=14% Similarity=0.116 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
++++.++++++||...++.|... |.++.++. |..++.+++..+....+ +.+ ...++.+...++.|++- ..++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~-~~~-~~~~~~~~~g~l~G~~w-~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFV-LPE-FWALSIFLVGLLSGAFW-ALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHh-CCc-ccccHHHHHHHHHHHHH-Hhhhh
Confidence 57899999999999999999854 58887775 77778777766555532 211 11244445455555554 88999
Q ss_pred HHHHHhcccchhhHHhhhh-hhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchh
Q 037942 89 LYFVGLENSTPTIGCALTN-ILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWK 167 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 167 (369)
+++.+.++++.+.+..+.+ +.+++..+++.+++||+.++++ ...-.+|++++++|++++...++++.
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~---------- 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA---------- 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc----------
Confidence 9999999999999999977 8889999999999999987762 00017889999999888764321110
Q ss_pred hhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHH---HHHHHHHHHHHHhcccccccc
Q 037942 168 YAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCL---ISSIMCSVIGLIVERKRAAWK 244 (369)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 244 (369)
+++...+..+|+.++++++++|+.|.+..|+.. .+|....+.+.. .+.++..+.. . .. .++
T Consensus 143 --------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~- 206 (290)
T TIGR00776 143 --------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPL- 206 (290)
T ss_pred --------ccccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHH--h-cc-cch-
Confidence 000002346799999999999999999999863 255666444443 3333322221 1 11 112
Q ss_pred cchhhHHHHHHHHHHHHhHHHHHHHHHHHh-ccCcceeeehhhHHHHHHHHHHHHHhcCccchhhh----HHHHHHHHHH
Q 037942 245 LNATIRLVSALYSGIVCSALAFCLIVWSIQ-RKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTA----IGSVLIVTGL 319 (369)
Q Consensus 245 ~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~gv 319 (369)
.+...+..++ .|++ ..+++.+|..+.+ +.+++..+++.+.+|+++.++++++++|..++.++ +|+++++.|+
T Consensus 207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~ 283 (290)
T TIGR00776 207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA 283 (290)
T ss_pred -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence 1222344444 7887 6899999999999 99999999999999999999999999999999999 9999999999
Q ss_pred hhheec
Q 037942 320 YAVLWG 325 (369)
Q Consensus 320 ~l~~~~ 325 (369)
.+....
T Consensus 284 ~l~~~~ 289 (290)
T TIGR00776 284 NILGIG 289 (290)
T ss_pred HHHhcc
Confidence 887543
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.87 E-value=1.4e-23 Score=178.49 Aligned_cols=293 Identities=16% Similarity=0.134 Sum_probs=217.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG 85 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (369)
..+|.++..++ .++..+.++++...+ .+|....-.|++.-.+...+...+++.... -+.....++++.|+.+ ..
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~t 109 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-FT 109 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-hh
Confidence 34667777777 555556666655555 789999999987777777766555332221 1223344567788888 67
Q ss_pred HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcc
Q 037942 86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIH 165 (369)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~ 165 (369)
+..+.|+|++|.+.+.++++....|.++.++++.++|||.++.. .++..+.+.|+++++- +..-+
T Consensus 110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvR---PpFlF------ 174 (346)
T KOG4510|consen 110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVR---PPFLF------ 174 (346)
T ss_pred HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEec---CCccc------
Confidence 77888999999999999999999999999999999999999998 9999999999999982 22111
Q ss_pred hhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942 166 WKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKL 245 (369)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (369)
.+++.++.+.....+.+|...++.+.+.-+.-.++.|+..++. +......+..+++.+..+...... +. -+++.
T Consensus 175 ---G~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~i-g~-~~lP~ 248 (346)
T KOG4510|consen 175 ---GDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASI-GA-VQLPH 248 (346)
T ss_pred ---CCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhc-cc-eecCc
Confidence 1111122222345677888999999999999999999997774 334444455555555443332211 11 12332
Q ss_pred chhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942 246 NATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 246 ~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 325 (369)
- ..+|+.++.+|++ +.+++.+...++++..+..++++.+.+.+++.+++++++++.|+++.|+|+++++.+.+.....
T Consensus 249 c-gkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~ 326 (346)
T KOG4510|consen 249 C-GKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK 326 (346)
T ss_pred c-ccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence 2 2367777778886 4689999999999999999999999999999999999999999999999999999998877554
Q ss_pred CC
Q 037942 326 KD 327 (369)
Q Consensus 326 ~~ 327 (369)
|.
T Consensus 327 kw 328 (346)
T KOG4510|consen 327 KW 328 (346)
T ss_pred HH
Confidence 43
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.86 E-value=2.4e-19 Score=165.00 Aligned_cols=267 Identities=18% Similarity=0.185 Sum_probs=212.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHH
Q 037942 36 KPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFV 115 (369)
Q Consensus 36 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 115 (369)
.|..+++.++....++..+.....+ .++.++..+..+...+++. .++..+.+.|++|+|.+.-.++.++.|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 3889999999999888777655533 1223445566677778877 88889999999999999999999999999999
Q ss_pred HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942 116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI 195 (369)
Q Consensus 116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (369)
++.+++|+|.++++ ++++++..+|+.+....+.... +.++........|+++.+++.+
T Consensus 107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~----------------~~~~~~~~~~~~G~~ll~~sl~ 164 (303)
T PF08449_consen 107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSS----------------SSSNSSSFSSALGIILLLLSLL 164 (303)
T ss_pred HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccc----------------cccccccccchhHHHHHHHHHH
Confidence 99999999999998 9999999999999986543221 1111122223349999999999
Q ss_pred HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHH--hccccc--ccccchhhHHHHHHHHHHHHhHHHHHHHH
Q 037942 196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLI--VERKRA--AWKLNATIRLVSALYSGIVCSALAFCLIV 270 (369)
Q Consensus 196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~gi~~~~~~~~~~~ 270 (369)
+.+...+.+++..++++ ++...+++.+..+.+...+.... .+.... ......+..+..++...+ +..++..+.+
T Consensus 165 ~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~ 243 (303)
T PF08449_consen 165 LDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999987655 66889999999999888777776 322111 122222324444444444 5667888888
Q ss_pred HHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 271 WSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 271 ~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
...++.++...+++..++-+++++++++++++++++.+|+|.++++.|+.+....++|+
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 89999999999999999999999999999999999999999999999999998877664
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=8.9e-19 Score=156.46 Aligned_cols=300 Identities=12% Similarity=0.141 Sum_probs=228.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHHHHHHHH----HHh---hhc-------------
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGM--KPLVLVAYRQMFATLATIPFA----YFI---EWK------------- 62 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~--~~~~~~~~r~~~~~l~l~~~~----~~~---~~~------------- 62 (369)
+...|+.++++..++|=.+.-+.+...+++- .|+.+++.....-.+-+.++. .++ .|.
T Consensus 11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~ 90 (416)
T KOG2765|consen 11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA 90 (416)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence 4678999999999999999999999988633 488888777655555555433 111 110
Q ss_pred -------------------------------C-------------CC--CCCH-------------HHHHHHHHHHHhhh
Q 037942 63 -------------------------------T-------------RP--KITW-------------PILFQIFLCSVTGA 83 (369)
Q Consensus 63 -------------------------------~-------------~~--~~~~-------------~~~~~~~~~g~~~~ 83 (369)
. .. +.+. +..+..+....+-
T Consensus 91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW- 169 (416)
T KOG2765|consen 91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW- 169 (416)
T ss_pred hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence 0 00 0011 2223334444444
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS 163 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 163 (369)
.+++..++.|+.+++++..+++..+.-+|+..++.++..||+++.. ++++++++.|++++..++..
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~-------- 235 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSK-------- 235 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEecccc--------
Confidence 7888999999999999999999999999999999999999999996 99999999999999864321
Q ss_pred cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC---CchHHHHHHHHHHHHHHHHHHHHhcc-c
Q 037942 164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP---APYTCTTLMCLISSIMCSVIGLIVER-K 239 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~ 239 (369)
..++..+.+...|+++++++++.||+|.++.|+...+.+ |--....+..++..+++.|..++.+. .
T Consensus 236 ----------~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~ 305 (416)
T KOG2765|consen 236 ----------QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG 305 (416)
T ss_pred ----------ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 122334567799999999999999999999999876643 32223334444555555554443332 3
Q ss_pred ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942 240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL 319 (369)
Q Consensus 240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv 319 (369)
.+.++.+.......++..+.++++++-++|.+|.-..++..++.-+.++...+++.+.++-+..+++.+++|.+.|++|.
T Consensus 306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 33455555556677777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheecCCCC
Q 037942 320 YAVLWGKDKE 329 (369)
Q Consensus 320 ~l~~~~~~~~ 329 (369)
+..++.....
T Consensus 386 v~vn~~~~~~ 395 (416)
T KOG2765|consen 386 VIVNISSENS 395 (416)
T ss_pred hheecccccc
Confidence 9998776544
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.79 E-value=9.3e-19 Score=157.97 Aligned_cols=274 Identities=19% Similarity=0.168 Sum_probs=219.2
Q ss_pred HHHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchh
Q 037942 23 MNFTSKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPT 100 (369)
Q Consensus 23 ~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 100 (369)
..+..|+.++. |.+ |..++..+...+.+........+..+..+..++..+...+.+|++. +++.++-+.|+.+.+++
T Consensus 32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~Vs 110 (316)
T KOG1441|consen 32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVS 110 (316)
T ss_pred eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchh
Confidence 34455777772 354 8899999888888887776555444333333556788888899988 99999999999999999
Q ss_pred hHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCC
Q 037942 101 IGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK 180 (369)
Q Consensus 101 ~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
.++.+..++|++++++++++.+|+.++.. +..++....|+.+.+..+ .
T Consensus 111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e--------------------------~ 158 (316)
T KOG1441|consen 111 FYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE--------------------------L 158 (316)
T ss_pred HHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc--------------------------c
Confidence 99999999999999999999999999998 999999999999998522 3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CchHHHHHHHHHHHHHHH-HHHHHhccccc---ccccchhhHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSK--KFP-APYTCTTLMCLISSIMCS-VIGLIVERKRA---AWKLNATIRLVS 253 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~ 253 (369)
..+..|.+.++.+.+..+..+++.++..+ +.+ |+.....++..++.+.++ |.....+++.. .... +......
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAP-WFVTFLI 237 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccc-cchhhHH
Confidence 56789999999999999999999999984 222 779999999999999998 77776555332 1111 1112233
Q ss_pred HHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCC
Q 037942 254 ALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331 (369)
Q Consensus 254 l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~ 331 (369)
+.+.. ++...-+...+..+.+++|.+.++...+.-++.++.++++|+++.++.+..|+++.++|+.++.+.|.++++
T Consensus 238 ~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 238 LLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 33333 334455566677899999999999999999999999999999988999999999999999999988876544
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=2.9e-16 Score=131.68 Aligned_cols=260 Identities=16% Similarity=0.115 Sum_probs=203.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHH
Q 037942 37 PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVL 116 (369)
Q Consensus 37 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll 116 (369)
...++|+++..-.++.-++..+++.. +.+...-..+..++.- +.++....+.|+++.|-....+-.++.|+-++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 45667777777777665554443321 2222223334444443 4677788899999999999999999999999999
Q ss_pred HHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHH
Q 037942 117 AVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSIS 196 (369)
Q Consensus 117 ~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 196 (369)
++++.|++.+|++ ...++++++|+.+..+.++.. .+..+.....|.++.+++...
T Consensus 129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv-------------------~g~e~~t~g~GElLL~lSL~m 183 (337)
T KOG1580|consen 129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKV-------------------GGAEDKTFGFGELLLILSLAM 183 (337)
T ss_pred ehhhhcccccHHH------HHHHHHHHHHHHHhhcccccc-------------------CCCcccccchHHHHHHHHHHh
Confidence 9999999999997 999999999999998643322 233567788999999999999
Q ss_pred HHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccc--ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 037942 197 WAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERK--RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSI 273 (369)
Q Consensus 197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~ 273 (369)
-+.....+.+....+. ....+++++++.+.+.+..-.++.+.- +..+....+..|+.+..+++ ++.+++++.+..+
T Consensus 184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv 262 (337)
T KOG1580|consen 184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTV 262 (337)
T ss_pred cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHH
Confidence 9999999988876543 447799999999988887766655442 22233334557888888887 6789999999999
Q ss_pred hccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 274 QRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 274 ~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
.+.+|-..+++....-+++++.++++++.+++.+||+|.++++.|...=....
T Consensus 263 ~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 263 EEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 99999999999999999999999999999999999999999999977654433
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=8.1e-14 Score=125.16 Aligned_cols=299 Identities=10% Similarity=0.113 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhhc----CCCC------CCHHHHHH
Q 037942 8 MPFLAMVTVQLGYAGMNFTSKLALDSG---MKPLVLVAYRQMFATLATIPFAYFIEWK----TRPK------ITWPILFQ 74 (369)
Q Consensus 8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~------~~~~~~~~ 74 (369)
.-++.++...+.++......|+....+ +.|...++.--++-.+++...++...++ ..+. ..+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 567778888899999999999987654 6688888888888877777766665322 1111 24456667
Q ss_pred HHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcC
Q 037942 75 IFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHG 154 (369)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~ 154 (369)
..+.+++. ++.|.+++.++.+.+++..++..++..+.|+++.++++++|++++| |.++++.++|+.++..+..
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 77777776 8888899999999999999999999999999999999999999999 9999999999999974332
Q ss_pred ccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHH-HHHHHHHHHHH
Q 037942 155 KTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMC-LISSIMCSVIG 233 (369)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 233 (369)
++- ++.++....+...|....+.++..-+...++.++..++...+....-.+. +.+.++.+...
T Consensus 168 ~~~---------------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~ 232 (345)
T KOG2234|consen 168 SPT---------------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI 232 (345)
T ss_pred CCC---------------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 221 01113446788999999999999999999999999987443343333333 33333333333
Q ss_pred HHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHH
Q 037942 234 LIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSV 313 (369)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~ 313 (369)
+..+.....|.... ..|-...++-++.++++-.+...-+|+.+-..=.....+..+++.+.++.+++-.||....+|..
T Consensus 233 ~~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~ 311 (345)
T KOG2234|consen 233 LLQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL 311 (345)
T ss_pred hhccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 32222111111100 01222333334456666677777888888888888888999999999999999999999999999
Q ss_pred HHHHHHhhheecCCCC
Q 037942 314 LIVTGLYAVLWGKDKE 329 (369)
Q Consensus 314 li~~gv~l~~~~~~~~ 329 (369)
+++.++.++...+.++
T Consensus 312 lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 312 LVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHhhcCCccc
Confidence 9999999998544443
No 23
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=2.6e-16 Score=133.60 Aligned_cols=281 Identities=15% Similarity=0.116 Sum_probs=209.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG 85 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (369)
.+++.+.=+-.++-......+......|++ |...+|..++.-+++..++..+|+ + .-...|+.+++.++.. +-
T Consensus 17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~~~~~~~hYilla~~D-VE 90 (336)
T KOG2766|consen 17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K---YIKAKWRHYILLAFVD-VE 90 (336)
T ss_pred hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H---HHHHHHHHhhheeEEe-ec
Confidence 445544444444444445555554444565 888899999999999999888743 1 2245566688889888 77
Q ss_pred HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcc
Q 037942 86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIH 165 (369)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~ 165 (369)
+|++...|.||++...++++-+...+.+.+++|+++|.|.++.+ ..|+++|+.|++++.+.+ ..
T Consensus 91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sD--V~-------- 154 (336)
T KOG2766|consen 91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSD--VH-------- 154 (336)
T ss_pred ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEee--ec--------
Confidence 77788999999999999999999999999999999999999987 999999999999998642 11
Q ss_pred hhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 037942 166 WKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKL 245 (369)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (369)
.....++.+..+|+.+.++++-+||+.++..+.+.++ .|....+....+.++++...-.+..........
T Consensus 155 --------agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~- 224 (336)
T KOG2766|consen 155 --------AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIFERHHVSTLH- 224 (336)
T ss_pred --------cccccCCCCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhhhccceeeEe-
Confidence 1122246788999999999999999999999999988 466888888889998888776443222211111
Q ss_pred chhhHHHHHHHH-HHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 246 NATIRLVSALYS-GIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 246 ~~~~~~~~l~~~-gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
++ |....++ ..++..+-|-+....++..+++-.++-..++-.++.++ ..||-+.+|..++..+.+..|.+++..
T Consensus 225 -w~--~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 225 -WD--SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred -eh--HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 11 2222222 33333444444455678888888888888888999888 678888999999999999999888833
No 24
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.66 E-value=5.5e-15 Score=129.04 Aligned_cols=265 Identities=15% Similarity=0.170 Sum_probs=214.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHH
Q 037942 36 KPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFV 115 (369)
Q Consensus 36 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 115 (369)
++..+++.+-+.+.++-..+... ++.. ....+.|..+...++.+ .++..+-+.|++|++-..-.+-.++--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 57888888888888877555433 2222 34456677788888888 88889999999999999999999999999999
Q ss_pred HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942 116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI 195 (369)
Q Consensus 116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (369)
.+.+++|.|.+..+ .+...++..|+.+....+..+ +.++....+...|+.+......
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~-----------------s~~~~g~~ns~~G~~Ll~~~L~ 182 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD-----------------SSSKSGRENSPIGILLLFGYLL 182 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC-----------------CccccCCCCchHhHHHHHHHHH
Confidence 99999999999998 999999999999988653322 2223345688999999999999
Q ss_pred HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccc--cccccchhhHHHHHHHHHHHHhHHHHHHHHHH
Q 037942 196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKR--AAWKLNATIRLVSALYSGIVCSALAFCLIVWS 272 (369)
Q Consensus 196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a 272 (369)
..++-+..++++.+++. +++.++++.++...+......+..+..+ ..+-..++..+.-++.... +..+++.+.++.
T Consensus 183 fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~T 261 (327)
T KOG1581|consen 183 FDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYT 261 (327)
T ss_pred HHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhh
Confidence 99999999999987654 6788999999999998877755333321 2222333445666666665 567899999999
Q ss_pred HhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 273 IQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 273 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
+++.++.+.+.++.++-.++++++.++++.+.++.||+|..+++.|+.+-...+++
T Consensus 262 I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 262 IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988766655
No 25
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.66 E-value=5.3e-16 Score=117.98 Aligned_cols=134 Identities=16% Similarity=0.214 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHHHHHHHHHHHhhhHHHH
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-KITWPILFQIFLCSVTGATGNQ 87 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 87 (369)
..+++++++++||...++.|...++ +||...++.|..+..+++..++....+.+.+ ..+.|.|..+++.|+.+ .+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw 81 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence 5789999999999999999999995 9999999999999999999888875543322 24788899999999777 9999
Q ss_pred HHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 88 VLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
.+||.|++...++.+.++-.+.|+++++++++++|||++.++ |+|+++..+|++++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999999 999999999998875
No 26
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.66 E-value=3.8e-14 Score=123.76 Aligned_cols=254 Identities=14% Similarity=0.139 Sum_probs=192.5
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCCHHHHHHH-HHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhh
Q 037942 35 MK-PLVLVAYRQMFATLATIPFAYFIEWKTRP---KITWPILFQI-FLCSVTGATGNQVLYFVGLENSTPTIGCALTNIL 109 (369)
Q Consensus 35 ~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~-~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~ 109 (369)
++ |..++.++.++-.++........+++..+ ..+|++..+- ...+++. ++.-.+.+++++|++.+..++..+..
T Consensus 42 f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSs 120 (349)
T KOG1443|consen 42 FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSS 120 (349)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccH
Confidence 44 88888888888877776665554433222 4677766654 4566665 88888999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHH
Q 037942 110 PAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIA 189 (369)
Q Consensus 110 pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 189 (369)
++|+.+++.++.-||+++.- ..-++++.+|+.++++.+ .+.+..|..+
T Consensus 121 i~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~Ks--------------------------Tqf~i~Gf~l 168 (349)
T KOG1443|consen 121 ILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYKS--------------------------TQFNIEGFFL 168 (349)
T ss_pred HHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEecc--------------------------cceeehhHHH
Confidence 99999999999999999986 666777777888777532 2456789999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCC----CchHHHHHHHHHHHHHHHHHHHHhcccccc-----cccchh-hHHHHHHHHHH
Q 037942 190 IIASSISWAAWVIIQTKLSKKFP----APYTCTTLMCLISSIMCSVIGLIVERKRAA-----WKLNAT-IRLVSALYSGI 259 (369)
Q Consensus 190 ~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~gi 259 (369)
...++++-++.-.+.+++.++.+ +|....+.......+.++|..+..|+.... +...++ ..+..+..++.
T Consensus 169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l 248 (349)
T KOG1443|consen 169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL 248 (349)
T ss_pred HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence 99999999988888888776643 788888888888888888988877763211 221111 12333322222
Q ss_pred HHhHHHHH---HHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 260 VCSALAFC---LIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 260 ~~~~~~~~---~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
+...++. .-+.-+.+++....++.+-..-+.+.+++.++.++.++...|.|..+...|+.+.
T Consensus 249 -~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 249 -GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred -HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 2233333 2334567889999999999999999999999999999999999999999999988
No 27
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=1e-13 Score=122.67 Aligned_cols=292 Identities=13% Similarity=0.069 Sum_probs=219.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGAT 84 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (369)
..+...++..++.--...+..|..+.. +++ ...+...+.+.+.+.+...-..+- -+.++++++..+..+...++. .
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf-~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF-V 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH-H
Confidence 344555555555555556667887764 233 233334787777777766544422 233457899999999999887 8
Q ss_pred HHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCc
Q 037942 85 GNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSI 164 (369)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 164 (369)
++...-..+++|+++...+++....|+++++...+++|.++++.. +.++...++|.......+
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d----------- 151 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD----------- 151 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc-----------
Confidence 888888999999999999999999999999999999999888887 999998888888776422
Q ss_pred chhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcc-c---
Q 037942 165 HWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVER-K--- 239 (369)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~--- 239 (369)
...+..|..+++...++-+.+.+..|+..+..+ +.+..+++..+.+.........+++. +
T Consensus 152 ---------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~ 216 (314)
T KOG1444|consen 152 ---------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS 216 (314)
T ss_pred ---------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH
Confidence 133445999999999999999999998876422 45778999999998888777766553 1
Q ss_pred ccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 037942 240 RAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGL 319 (369)
Q Consensus 240 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv 319 (369)
...........+..+...++++.++.| +..++.+..++...++++..+-..+.+...++.|++.++...+|..+-++|-
T Consensus 217 ~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg 295 (314)
T KOG1444|consen 217 LNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG 295 (314)
T ss_pred hhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence 111011223356666666776655555 6677899999999999998888888888888888889999999999999999
Q ss_pred hhheecCCCCCCCC
Q 037942 320 YAVLWGKDKELKPD 333 (369)
Q Consensus 320 ~l~~~~~~~~~~~~ 333 (369)
+++.+.+.++++.+
T Consensus 296 v~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 296 VLYSYATFRKKKQP 309 (314)
T ss_pred hHHhhhhhhhccCC
Confidence 99988876654433
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.61 E-value=4.7e-14 Score=124.79 Aligned_cols=230 Identities=13% Similarity=0.143 Sum_probs=169.8
Q ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhh
Q 037942 68 TWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAM 147 (369)
Q Consensus 68 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 147 (369)
++|+..++.+.+++. ++.+.+.+.++++++++..+++.++..+++++++++++|+|++++| |.++++.++|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 567888888888886 9999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHH
Q 037942 148 VLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISS 226 (369)
Q Consensus 148 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~ 226 (369)
++...+...... +++.....+........|+++.++++++-++..++.+|..|+.. +.+.........+.
T Consensus 86 lv~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi 156 (244)
T PF04142_consen 86 LVQLSSSQSSDN---------SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGI 156 (244)
T ss_pred eeecCCcccccc---------ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 987543221100 00000001112456689999999999999999999999998754 33444555555555
Q ss_pred HHHHHHHHHhcccc-cccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccc
Q 037942 227 IMCSVIGLIVERKR-AAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLF 305 (369)
Q Consensus 227 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~ 305 (369)
++.++.....+.+. .+...... +-...+.-++.+.++-.+....+||.+...=......+.+++.++++.+++.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~g~f~G--~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s 234 (244)
T PF04142_consen 157 LFNLLALLLSDGSAISESGFFHG--YSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPS 234 (244)
T ss_pred HHHHHHHhcccccccccCCchhh--cchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 55554443332211 11111111 1112233344566677777889999999999999999999999999999999999
Q ss_pred hhhhHHHHHH
Q 037942 306 IGTAIGSVLI 315 (369)
Q Consensus 306 ~~~~~G~~li 315 (369)
....+|..++
T Consensus 235 ~~f~lg~~~V 244 (244)
T PF04142_consen 235 LSFLLGAALV 244 (244)
T ss_pred hHHhhheecC
Confidence 9999998653
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.54 E-value=2.7e-13 Score=103.33 Aligned_cols=136 Identities=20% Similarity=0.175 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA 265 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 265 (369)
...+++++++.+++..++.|--.++ .||...+..+.++..+.+.......++ ++.....++..|..++..| +.++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence 5689999999999999999998887 477999999999988888776665543 2222223445788888877 578899
Q ss_pred HHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 266 FCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
..+|+++++..+++++.++..++|+++.+++++++||+++..+|+|+.+|++|+++...
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999887643
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=2.4e-14 Score=113.92 Aligned_cols=125 Identities=19% Similarity=0.322 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhccc
Q 037942 18 LGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENS 97 (369)
Q Consensus 18 ~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 97 (369)
++||...++.|...++ .||....++|++.+.+ ++++....+++.....+++++......+.+....++.+++.+++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999886 9999999999999998 6666666555444567888899999999887799999999999999
Q ss_pred chhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 98 TPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 98 ~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
+++.++++.++.|+++.+++++++||++++++ ++|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 999999999999875
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.53 E-value=2.3e-14 Score=123.06 Aligned_cols=270 Identities=13% Similarity=0.069 Sum_probs=205.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhc----CC--CCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhH
Q 037942 37 PLVLVAYRQMFATLATIPFAYFIEWK----TR--PKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILP 110 (369)
Q Consensus 37 ~~~~~~~r~~~~~l~l~~~~~~~~~~----~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p 110 (369)
|..+++.++++...+...+-....+- .. .+++.+..+.....+++. .+.-...+.+++|.+++.-.+-.++..
T Consensus 61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchhh
Confidence 88889999888877776665443221 11 124556666666666665 566666789999999999999999999
Q ss_pred HHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHH
Q 037942 111 AITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAI 190 (369)
Q Consensus 111 i~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 190 (369)
+|+++++++++|+|-+... ..++.+++.|-.+=...++ ..+.-.+.|.+++
T Consensus 140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE~-----------------------~~~~ls~~GvifG 190 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQEG-----------------------STGTLSWIGVIFG 190 (347)
T ss_pred hHHHHhHHhhccccccccc------ceeehhheehheecccccc-----------------------ccCccchhhhHHH
Confidence 9999999999999999987 7777777777665542111 1356778999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhcccccccc--cc-hhhHHHHHHHHHHHHhHHHH
Q 037942 191 IASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWK--LN-ATIRLVSALYSGIVCSALAF 266 (369)
Q Consensus 191 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~gi~~~~~~~ 266 (369)
+.|.++-|+..+..|+...... .-+..+++.++.+.++++|...+.+.-...+. .. ....|..+...|+++..++|
T Consensus 191 VlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy 270 (347)
T KOG1442|consen 191 VLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY 270 (347)
T ss_pred HHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998765433 34778999999999999999887655222222 22 23356666666666554444
Q ss_pred HHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCCCCCCCC
Q 037942 267 CLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELKPDNVIV 337 (369)
Q Consensus 267 ~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~~~~~~~ 337 (369)
...+-+|.++|.+-.+-....-..-.+++..+++|.-+...|-+-.++++|..++.+.|.++.+++.+++
T Consensus 271 -vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~ 340 (347)
T KOG1442|consen 271 -VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR 340 (347)
T ss_pred -eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence 4445678899999999999999999999999999999999999999999999999998877655554443
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.41 E-value=1e-12 Score=104.48 Aligned_cols=125 Identities=29% Similarity=0.447 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHh
Q 037942 195 ISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQ 274 (369)
Q Consensus 195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~ 274 (369)
++||.+.+..|+..++ .++....++++..+.+ .++.....+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 4789999999999888 4679999999999998 666665544422 22223336777888888888999999999999
Q ss_pred ccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 275 RKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 275 ~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
+.+++.++++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764
No 33
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.36 E-value=2.1e-11 Score=105.39 Aligned_cols=283 Identities=13% Similarity=0.125 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-------------CCHHHHHHHHH
Q 037942 18 LGYAGMNFTSKLALD---SGM----KPLVLVAYRQMFATLATIPFAYFIEWKTRPK-------------ITWPILFQIFL 77 (369)
Q Consensus 18 ~~~g~~~~~~k~~~~---~g~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 77 (369)
+.=.++.+.+|++-+ +|- +|+.....-++.-++++..+.+++.|...+. .+.+. ...+.
T Consensus 13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~ 91 (372)
T KOG3912|consen 13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLP 91 (372)
T ss_pred hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecC
Confidence 334566777787643 123 3666666666666777777777765543321 01111 12233
Q ss_pred HHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942 78 CSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTF 157 (369)
Q Consensus 78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~ 157 (369)
..+|- ..+..++|.++.+++++..+++.....+|+.+++.-+++.+++.+| |+|+....+|++++...+ ..
T Consensus 92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d--~~ 162 (372)
T KOG3912|consen 92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLD--VH 162 (372)
T ss_pred hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeee--cc
Confidence 56666 6677889999999999999999999999999999999999999999 999999999999987432 11
Q ss_pred cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHh
Q 037942 158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIV 236 (369)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 236 (369)
. ++.+...-++...|+++.+++-+.-|+.+++-+|..++.. +|.....|..+.+.+++..+....
T Consensus 163 ~--------------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m 228 (372)
T KOG3912|consen 163 L--------------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPM 228 (372)
T ss_pred c--------------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHH
Confidence 0 0111112256678999999999999999999988877644 889999999999966554444321
Q ss_pred c----c------c---ccccc----cchhhHHHHHHHHHHHHhHHHHHHHH-HHHhccCcceeeehhhHHHHHHHHHHHH
Q 037942 237 E----R------K---RAAWK----LNATIRLVSALYSGIVCSALAFCLIV-WSIQRKGPLYVSVFSPLLLVIVAIVSWA 298 (369)
Q Consensus 237 ~----~------~---~~~~~----~~~~~~~~~l~~~gi~~~~~~~~~~~-~a~~~~~~~~~s~~~~~~pv~~~l~~~~ 298 (369)
. . + +.+|. .........+...|...+..-|-+-- .-.|+.++++-..+-.+...+-.+++..
T Consensus 229 ~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~ 308 (372)
T KOG3912|consen 229 YYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA 308 (372)
T ss_pred hheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence 1 1 0 11110 00001122233334333321111111 2346778888899999999999999999
Q ss_pred HhcCccchhhhHHHHHHHHHHhhhee
Q 037942 299 LFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 299 ~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
+..|.+...|+.|.++.+.|+++++.
T Consensus 309 m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 309 MGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999863
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.31 E-value=6.1e-10 Score=98.33 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=175.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC--HHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHH
Q 037942 35 MKPLVLVAYRQMFATLATIPFAYFIEWKTRPKIT--WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPA 111 (369)
Q Consensus 35 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi 111 (369)
=+|.+..+.-.+-+.++-+....+.+ +..+ .+.+...++.|++- .+.+...+.|+++.+++.+.++ ...+-+
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 44666565555555555555544422 2233 47788888888887 9999999999999999999999 577777
Q ss_pred HHHHHHHHhhhccccccccCCccce---ehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHH
Q 037942 112 ITFVLAVIFRQEYVAIKTKPGQAKV---FGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSI 188 (369)
Q Consensus 112 ~~~ll~~l~~~e~~~~~~~~~~~~~---~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 188 (369)
.+.++++++++|--+..+ +. +++++.++|+.+....++++ +...+..+..+|+.
T Consensus 85 g~sl~gv~~fgEW~~~~~-----~~~G~~Al~liiiGv~lts~~~~~~------------------~~~~~~~~~~kgi~ 141 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQ-----KIIGFLALVLIIIGVILTSYQDKKS------------------DKSSSKSNMKKGIL 141 (269)
T ss_pred HHHHHHHhhcCCCCCcch-----HHHHHHHHHHHHHHHHHhccccccc------------------cccccccchhhHHH
Confidence 799999999999877665 22 35667777887776533221 11112456678999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHH
Q 037942 189 AIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCL 268 (369)
Q Consensus 189 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~ 268 (369)
..+++.+.|..|.+.-|... .+++....-+.+...+..+.+....++. .+. ...|..++ .|++ -.++..+
T Consensus 142 ~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~~---k~~~~nil-~G~~-w~ignl~ 211 (269)
T PF06800_consen 142 ALLISTIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFIFNLFSKKP--FFE---KKSWKNIL-TGLI-WGIGNLF 211 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHHHhhccccc--ccc---cchHHhhH-HHHH-HHHHHHH
Confidence 99999999999999977743 2556666666555544444444433111 111 11333333 3443 3578888
Q ss_pred HHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchh----hhHHHHHHHHHHhh
Q 037942 269 IVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIG----TAIGSVLIVTGLYA 321 (369)
Q Consensus 269 ~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~----~~~G~~li~~gv~l 321 (369)
+..+.++.+.+..-.+..+.++++.+.+.+++||+=+.. .++|.++++.|.++
T Consensus 212 ~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 212 YLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999998765 44688888888654
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.30 E-value=5.3e-11 Score=107.26 Aligned_cols=134 Identities=16% Similarity=0.255 Sum_probs=114.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhh
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKP--LVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTG 82 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 82 (369)
...+|..++++++++|+...+..|...++ .++ .....+++.++.+++.++....++. ...+.+++...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 34679999999999999999999998764 664 4555578999999888887664322 234677888888888888
Q ss_pred hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhh
Q 037942 83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAM 147 (369)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 147 (369)
...++.+++.++++.+++.++.+.++.|+++.++++++++|+++..+ ++|+.+.+.|+.
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence 78999999999999999999999999999999999999999999998 999999998863
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.29 E-value=2e-11 Score=102.02 Aligned_cols=271 Identities=15% Similarity=0.116 Sum_probs=193.1
Q ss_pred HHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHh
Q 037942 27 SKLALDS-GMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCA 104 (369)
Q Consensus 27 ~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~ 104 (369)
.|+.... |++ -+.+.+.+.+.+.+-++.+-+.+-.+ .+.++...+...+++. +...+.--.+++|.+....++
T Consensus 25 NKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiYTi 99 (309)
T COG5070 25 NKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIYTI 99 (309)
T ss_pred hHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeHHHH
Confidence 3554432 344 45666777776666665553332222 2233333444455555 455556678999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccch
Q 037942 105 LTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLI 184 (369)
Q Consensus 105 l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
+.++..+.++....+++|.|.+... ..+.++.+..-+...+.+.+... -.....+
T Consensus 100 FKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~-------------------~~~~~lN 154 (309)
T COG5070 100 FKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA-------------------FKAQILN 154 (309)
T ss_pred hccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH-------------------HHhcccC
Confidence 9999999999999999999999887 88888777777766653321110 0124567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhh--CCCchHHHHHHHHHHHHHHHHHHHHhcc-ccccccc-chhhHHHHHHHHHHH
Q 037942 185 LGSIAIIASSISWAAWVIIQTKLSKK--FPAPYTCTTLMCLISSIMCSVIGLIVER-KRAAWKL-NATIRLVSALYSGIV 260 (369)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~~~gi~ 260 (369)
.|.+++...++.-+.+....|+-.+- ..+ ...++|.++.+..+++.+.++.+. +...... ........+...|+.
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~ 233 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC 233 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence 89999999999999999999876542 224 789999999999998888887654 1111111 111134455555654
Q ss_pred HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
++.--++..+.++.++.+..++++.++-.-..+-|.++++|+.+...+..+.+-..+..++...+.++
T Consensus 234 -svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k 301 (309)
T COG5070 234 -SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK 301 (309)
T ss_pred -HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444578889999999999999999999999999999999999999999999888888777766543
No 37
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.29 E-value=5.9e-11 Score=102.49 Aligned_cols=265 Identities=11% Similarity=0.049 Sum_probs=181.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcc-cchhhHHhhhhhhHHHHHH
Q 037942 37 PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLEN-STPTIGCALTNILPAITFV 115 (369)
Q Consensus 37 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~l 115 (369)
-..++|.++++-++--+++.--.. ..+++++.|++...+. .. ...+.+.++++++ ++...-.++.+-.++.+++
T Consensus 33 gNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~---mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 33 GNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVA---MF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehh---ee-eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 366777777665554444321111 1224556666544332 22 4566778899998 8888888889999999999
Q ss_pred HHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHH
Q 037942 116 LAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSI 195 (369)
Q Consensus 116 l~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (369)
+++++.|+|.+.+| ..++++..+|+++.++.+.++... +...+.+ ++..........|+.+..+|.+
T Consensus 108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~-----~~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS--KLSGLDS-----GSAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh--hhccccc-----CcccccchHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999998765443221 1111111 1112234466789999999999
Q ss_pred HHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccc-cccc--------------ccchhhHHHHHHHHHH
Q 037942 196 SWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERK-RAAW--------------KLNATIRLVSALYSGI 259 (369)
Q Consensus 196 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~--------------~~~~~~~~~~l~~~gi 259 (369)
.-|...+.++..-++++ ++-...+|....+...++.. ..+ ..+| ...-+..|..++. -+
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-n~ 249 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-NV 249 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHHhcCcceeccccCccccHHHHHHHH-HH
Confidence 99999998888777655 66789999998885554332 211 0111 1112334555444 22
Q ss_pred HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
+.+..+.--.+..-.+.++-++++...+.-.++.+++++.|+.++++.-|+|..+++.|.+++..
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23333332333344567888999999999999999999999999999999999999999888853
No 38
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.28 E-value=2.9e-10 Score=103.69 Aligned_cols=278 Identities=15% Similarity=0.125 Sum_probs=159.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHH-HHHHHHHHHh
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-KITWPI-LFQIFLCSVT 81 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~ 81 (369)
.+...|..+++.++++-+....+-|....+ .+. ...+. ...+++ ..+.+..|++
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHH
Confidence 356889999999999999999999987543 110 00000 001111 2234556666
Q ss_pred hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCC
Q 037942 82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPN 161 (369)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 161 (369)
...++..+.+.|+.+.|++..+++..+.-++.++++.+++|||+++++ +.|..+++.|..++....+.+... +
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~-~ 131 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI-H 131 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc-C
Confidence 667888889999999999999999999999999999999999999999 999999999999877543222100 0
Q ss_pred CCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHH---HHH-Hhc
Q 037942 162 SSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSV---IGL-IVE 237 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~-~~~ 237 (369)
+.+ +-.+.-.+.......... ..++..+.....++..++ +.........++++...+. +.. ...
T Consensus 132 -----t~~----~l~~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~ 199 (300)
T PF05653_consen 132 -----TLD----ELIALLSQPGFLVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL 199 (300)
T ss_pred -----CHH----HHHHHhcCcceehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence 000 000000011111111111 112222222222222221 2121111111222211111 110 111
Q ss_pred c--cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHH-HHHHHHHhcCcc--ch----hh
Q 037942 238 R--KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIV-AIVSWALFQEKL--FI----GT 308 (369)
Q Consensus 238 ~--~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~-~l~~~~~~~e~~--~~----~~ 308 (369)
. ...++. .+..|..+ ..-+.+........++++++.+++.+.++.+..-... .+-|.++++|.. +. ..
T Consensus 200 ~~~g~~~f~--~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~ 276 (300)
T PF05653_consen 200 TFSGDNQFT--YPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGF 276 (300)
T ss_pred HhcCchhhh--hhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHH
Confidence 1 111222 22234333 3334456677788999999999999888877665554 455666778754 44 44
Q ss_pred hHHHHHHHHHHhhheecCC
Q 037942 309 AIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 309 ~~G~~li~~gv~l~~~~~~ 327 (369)
..|..+++.|+++....|.
T Consensus 277 ~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 277 LCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred HHHHHHHHHhhheeeccCc
Confidence 5688889999988865543
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.25 E-value=4.5e-11 Score=98.13 Aligned_cols=212 Identities=15% Similarity=0.162 Sum_probs=157.9
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS 163 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 163 (369)
++.++.|..|++.++++.++.+..+...|+.+++++++|+|+...+ +++.++++.|++++.+.+.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN--------- 128 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADN--------- 128 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccc---------
Confidence 7888999999999999999999999999999999999999999997 9999999999999985332
Q ss_pred cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHH-----HHHHHHHHHhcc
Q 037942 164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISS-----IMCSVIGLIVER 238 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~ 238 (369)
.....+.|+.+++.+++..++|-++.|+...+-+ --....++...+. +..-++.+.. .
T Consensus 129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T 191 (290)
T KOG4314|consen 129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAF-T 191 (290)
T ss_pred ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHH-h
Confidence 2356789999999999999999999999876522 1112222222211 1111222211 2
Q ss_pred cccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHH
Q 037942 239 KRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTG 318 (369)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g 318 (369)
...+|.......|..+...+.+.. .-.++.+.++....|...++-+.....--..++.++-+-..+....+|.++++.|
T Consensus 192 ~VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 192 GVEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred chHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 223333222335676766665543 3345677889999999999999888888899997666666789999999999999
Q ss_pred HhhheecCCC
Q 037942 319 LYAVLWGKDK 328 (369)
Q Consensus 319 v~l~~~~~~~ 328 (369)
.++....+.+
T Consensus 271 FiLiiiP~d~ 280 (290)
T KOG4314|consen 271 FILIIIPEDK 280 (290)
T ss_pred HHheecccch
Confidence 9988765544
No 40
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.24 E-value=4.4e-09 Score=96.63 Aligned_cols=301 Identities=13% Similarity=0.104 Sum_probs=181.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHH-HHHHHHHHHH-HHHHHhhh---cCCCCCCHHHHHHHHHHH
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAY-RQMFATLATI-PFAYFIEW---KTRPKITWPILFQIFLCS 79 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~-r~~~~~l~l~-~~~~~~~~---~~~~~~~~~~~~~~~~~g 79 (369)
+-..|+++.+++.++||+.++-.|+ .++ .+-... +. ..+++.++.- ....+..+ ......+.+.+...++.|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 5578999999999999999999998 332 442221 11 1111111111 00001001 111134677788888888
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccc---cccccCCccceehhhhhhhhhhhhhhhcCc
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYV---AIKTKPGQAKVFGTIICVGGAMVLSFYHGK 155 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 155 (369)
++- .+.+.+++.++++...+.+..+ ..+.-++..++..++++|=. +..+ +..-.+|++++++|+++...-...
T Consensus 81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 887 9999999999999999999888 88889999999999988643 2221 112267888888999988852111
Q ss_pred cccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHH-------HHHHHhhhhCCCchHHHHHHHH---HH
Q 037942 156 TFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWV-------IIQTKLSKKFPAPYTCTTLMCL---IS 225 (369)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~ 225 (369)
.. ++ .++++.+..+..+|+++++++++.+++|. ...+...+...++.....-+.. .+
T Consensus 158 k~------------~~-~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G 224 (345)
T PRK13499 158 KE------------RK-MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGG 224 (345)
T ss_pred cc------------cc-cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHH
Confidence 10 00 00001235678899999999999999999 4433322121233333333333 33
Q ss_pred HHHHHHH-HHH---hccccc---ccccch---hhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeee---hh-hHHHHH
Q 037942 226 SIMCSVI-GLI---VERKRA---AWKLNA---TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSV---FS-PLLLVI 291 (369)
Q Consensus 226 ~i~~~~~-~~~---~~~~~~---~~~~~~---~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pv~ 291 (369)
..+.-+. ... .+++.. +..... ......-+..|+ .=.+++.++..+-++.+...... +. .+..++
T Consensus 225 ~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vii 303 (345)
T PRK13499 225 GAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLC 303 (345)
T ss_pred HHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHH
Confidence 3322221 111 111111 111110 011111133343 34567777777777776554444 44 788899
Q ss_pred HHHHHHHHhcCccc------hhhhHHHHHHHHHHhhheecC
Q 037942 292 VAIVSWALFQEKLF------IGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 292 ~~l~~~~~~~e~~~------~~~~~G~~li~~gv~l~~~~~ 326 (369)
+.+.+. ++||.=+ ...++|++++++|..+...++
T Consensus 304 stlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 304 GNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred HHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 999998 5999866 567899999999988876553
No 41
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.18 E-value=7.8e-10 Score=95.31 Aligned_cols=261 Identities=14% Similarity=0.138 Sum_probs=192.4
Q ss_pred CCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHH
Q 037942 34 GMKP--LVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPA 111 (369)
Q Consensus 34 g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi 111 (369)
|++| +.+++.++.+-..+.+..+...+.+ +...+ |+.+..++.+. ...+.+.+-++.|++-..-.++.++.-+
T Consensus 70 gfkp~GWylTlvQf~~Ysg~glie~~~~~~k-~r~iP---~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKli 144 (367)
T KOG1582|consen 70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQTK-RRVIP---WRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLI 144 (367)
T ss_pred cCcccchHHHHHHHHHHHhhhheEEEeeccc-ceecc---hhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhh
Confidence 5663 5666777665544444433222222 22234 44456666666 6777788899999998888888999999
Q ss_pred HHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHH
Q 037942 112 ITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAII 191 (369)
Q Consensus 112 ~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 191 (369)
-+++.+.++-+.|.++.+ .++..+...|+++....+... +...+..|+.+.-
T Consensus 145 PVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~~----------------------sPNF~~~Gv~mIs 196 (367)
T KOG1582|consen 145 PVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQT----------------------SPNFNLIGVMMIS 196 (367)
T ss_pred hhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhccccc----------------------CCCcceeeHHHHH
Confidence 999999999999999998 999999999999998754332 3466788999999
Q ss_pred HHHHHHHHHHHHHHHhhhhCC-CchHHHHHHHHHHHHHHHHHHHHhccccccccc---chhhHHHHHHHHHHHHhHHHHH
Q 037942 192 ASSISWAAWVIIQTKLSKKFP-APYTCTTLMCLISSIMCSVIGLIVERKRAAWKL---NATIRLVSALYSGIVCSALAFC 267 (369)
Q Consensus 192 ~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~~~~~ 267 (369)
.|.++.|.-.-.+++..+..+ +...+.++...++.+.++......+.-...|+. ++..........+. .+.++..
T Consensus 197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~ 275 (367)
T KOG1582|consen 197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIV 275 (367)
T ss_pred HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHH
Confidence 999999987777777766544 446678888888888877766655554444432 12112333333333 3456666
Q ss_pred HHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 268 LIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 268 ~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
....-++..++..++.+....-.+++++++++|..++|.+..-|..+++.|+++..+.+++
T Consensus 276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 6666778889999999999999999999999999999999999999999999999888743
No 42
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.16 E-value=6.9e-11 Score=92.30 Aligned_cols=105 Identities=15% Similarity=0.269 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHH
Q 037942 42 AYRQMFATLATIPFAYFIEWKT--RPKITWPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVI 119 (369)
Q Consensus 42 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l 119 (369)
.+|+..+.+++..+...+++.+ .+..+.+.+.+....|.++...++.+++.|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4788999999888877744321 11234466677777788886689999999999999 58889999999999999999
Q ss_pred hhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 120 FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 120 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
++|||+++++ +++++++++|++++...+
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWSD 108 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhhh
Confidence 9999999998 999999999999998643
No 43
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.16 E-value=7.7e-10 Score=101.48 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN 86 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (369)
..|.++.++++++|+...+..|...++ .++..... ...++++++.++...... ....++..+...+..|++...+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999988764 78877654 456666666666554322 22245566666678899988999
Q ss_pred HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
+.++++++++.+++.++++.++.|+++.++++++++|+++..+ ++|..+.+.|++......
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999 999999999999987543
No 44
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.14 E-value=1.2e-09 Score=90.05 Aligned_cols=138 Identities=23% Similarity=0.202 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh------CCCchHHHHHHHHHHHHHHHHHHHHhccccccc-----cc---c-hhhH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKK------FPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW-----KL---N-ATIR 250 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~---~-~~~~ 250 (369)
|.++++.+.++.+++.++.|+..++ ..++.....+....+.+.+++.....|...... .. . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998776 238899999999999999999888776532111 10 0 2234
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 251 LVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 251 ~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
+..++..|++ .....+..+..+++.+|...++...++.+...++++++++|+++..+++|+++.++|++++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555555554 456667888899999999999999999999999999999999999999999999999998764
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.11 E-value=1.2e-09 Score=100.21 Aligned_cols=137 Identities=11% Similarity=0.026 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN 86 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (369)
..|.++.++++++|+...+..|...+ -++.....+++.++.+.+.++............+.+.|...+..++++..+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999998543 3455667788888888887776553222111235678888888999888899
Q ss_pred HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
+.+++.++++.+++.++++.++.|++++++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 9999999999998874
No 46
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.11 E-value=1.9e-09 Score=99.07 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=110.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccc--cchhhHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWK--LNATIRLVSALYSG 258 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g 258 (369)
++..+|++++++++++|+...+..|.. .+ -+|....++++.++.+.+.++.....+ ..... ..+...+ .....+
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence 345689999999999999999999875 44 467999999999998877766543322 11111 1111122 233356
Q ss_pred HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
.+.....+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 66677889999999999999999999999999999999999999999999999999999998775
No 47
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.08 E-value=2.7e-09 Score=97.36 Aligned_cols=134 Identities=16% Similarity=0.151 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHH
Q 037942 187 SIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAF 266 (369)
Q Consensus 187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~ 266 (369)
..+.+.++++++..+++.|+..++ .++ ...+......+.+.|....... ...++.... .++..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 467899999999999999987766 232 3455666666666666553211 122332222 34444444555677888
Q ss_pred HHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942 267 CLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 267 ~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 325 (369)
.++++++++.+++.++++.+++|+++.+++++++||+++..+++|..+++.|+.+....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999887643
No 48
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.08 E-value=3.1e-09 Score=99.57 Aligned_cols=138 Identities=9% Similarity=0.087 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHh
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKP-LVLVAYRQMFATLATIPFAYFIEWKTRP----KITWPILFQIFLCSVT 81 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~ 81 (369)
..|..+++.++++|+...++.|..... .++ ...+++...++.+.+.+......+...+ ..+... ...+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHH
Confidence 448899999999999999999987664 654 4666677777766665555543322111 122222 223444554
Q ss_pred hhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 82 GATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
..+++.++++++++.+++.+++..++.|++++++++++++|+++..+ ++|.++++.|+.+....+
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK 330 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence 36788899999999999999999999999999999999999999999 999999999999988544
No 49
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.05 E-value=3.6e-09 Score=95.12 Aligned_cols=136 Identities=13% Similarity=0.148 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccc---cccccchhhH-HHHHHHHHHH
Q 037942 185 LGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKR---AAWKLNATIR-LVSALYSGIV 260 (369)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~ 260 (369)
+|..+.++++++|+...+..|.. .+ -+|.+..+++++++.+.+.++.....+.. ..++...... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 48899999999999999999984 44 47799999999999888766554332211 1111111112 3344444544
Q ss_pred HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 56888999999999999999999999999999999999999999999999999999988764
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.01 E-value=4.6e-09 Score=96.45 Aligned_cols=134 Identities=10% Similarity=0.137 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN 86 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (369)
..|.++++.++++|+...++.|...++ .++....+ ..+.+++.+...... ......+...|...+..++. ..+.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence 458899999999999999999987654 77765432 223333333222221 11123566777777777754 4889
Q ss_pred HHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942 87 QVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 152 (369)
+.+++.++++.+++.++.+.++.|++..++++++++|+++..+ ++|+++++.|+.+....
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhhh
Confidence 9999999999999999999999999999999999999999999 99999999999888753
No 51
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=1.2e-09 Score=96.80 Aligned_cols=279 Identities=13% Similarity=0.130 Sum_probs=166.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhh
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGA 83 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 83 (369)
.+...|.++++.+.++.|.+.++-|+...+ ... .. . +....+..-.++ +.+..|++..
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~-ra~~gg~~yl~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------L-RAGEGGYGYLKE--PLWWAGMLTM 74 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------c-cccCCCcchhhh--HHHHHHHHHH
Confidence 456788999999999999999999987664 111 00 0 111111111122 4455677777
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS 163 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 163 (369)
.++....+.|+.+.|++..+++..+..+..++++..++|||++... .+|+++|++|-.+++.. .+...
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h-aP~e~----- 142 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH-APKEQ----- 142 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe-cCccc-----
Confidence 8889999999999999999999999999999999999999999999 99999999999999864 33211
Q ss_pred cchhhhhcccccccCCCccchhHHHH-HHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHH---HHHHhc--
Q 037942 164 IHWKYAEKMSEENSGNKSNLILGSIA-IIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSV---IGLIVE-- 237 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~-~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~-- 237 (369)
-. .+..+........+.+. ..+-.....+-....|.. +.+.+.+.......++++..... +.....
T Consensus 143 ~i-------~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt 214 (335)
T KOG2922|consen 143 EI-------ESVEEVWELATEPGFLVYVIIIILIVLILIFFYAPR-YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLT 214 (335)
T ss_pred cc-------ccHHHHHHHhcCccHHHHHHHHHHHHHHHheeeccc-ccccceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence 00 00000011111112111 111111111111111111 11124444444444444222111 111000
Q ss_pred -ccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHH-HHHHHHHHHHHhcCcc--ch----hhh
Q 037942 238 -RKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLL-LVIVAIVSWALFQEKL--FI----GTA 309 (369)
Q Consensus 238 -~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~-pv~~~l~~~~~~~e~~--~~----~~~ 309 (369)
.+..+.. .+..|..++.+. .+........++|++..+++.++++.+.. ..++++-+.++|+|-- +. .+.
T Consensus 215 ~~g~~ql~--~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~ 291 (335)
T KOG2922|consen 215 FSGNNQLF--YPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGEL 291 (335)
T ss_pred hcCCcccc--cHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 1111121 122444444444 35667778889999999999888877654 4556666888888753 32 466
Q ss_pred HHHHHHHHHHhhheecCC
Q 037942 310 IGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 310 ~G~~li~~gv~l~~~~~~ 327 (369)
.|+..++.|+.+....|.
T Consensus 292 ~Gf~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 292 CGFVTIFLGIFLLHRTKD 309 (335)
T ss_pred HhHHHhhheeeEeeeecc
Confidence 788899999888854443
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.89 E-value=4.1e-08 Score=90.36 Aligned_cols=139 Identities=11% Similarity=0.181 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCCCCHHHHHHHHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMK---PLVLVAYRQMFATLATIPFAYFIEWKT-----RPKITWPILFQIFLC 78 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~---~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 78 (369)
..|.+++++++++|+...++.|...+. .+ .....++....+.+.+.......+... ....+...|...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999986543 32 233344444444443333322222111 123466788888999
Q ss_pred HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942 79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 152 (369)
+++...+.+.+++.++++.+++.++.+..+.|++..++++++++|+++..+ ++|.++.++|+.+...+
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhcc
Confidence 999989999999999999999999999999999999999999999999999 99999999999987643
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.86 E-value=8.2e-08 Score=76.12 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHH
Q 037942 185 LGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSAL 264 (369)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 264 (369)
.|.++.+.+.++-+...++.|+-.++.++ ...... . ... .... . .....+++|++++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~-~~~~-----------~---~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAA-LLAF-----------G---LALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHH-HHHH-----------h---ccHHHHHHHHHHHHH
Confidence 47788999999999999999988776443 221111 0 000 0000 0 012245668888999
Q ss_pred HHHHHHHHHhccCcceeeehhhHHHHHHHHHHHH--HhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 265 AFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWA--LFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 265 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~--~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
++++|.+++++.+.+.+.++....+++..+.++. ++||++++.+++|.++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999888888875 79999999999999999999999875443
No 54
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.86 E-value=1.1e-08 Score=89.91 Aligned_cols=210 Identities=11% Similarity=0.053 Sum_probs=128.3
Q ss_pred chhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCC--CCCcchhhhhccccc
Q 037942 98 TPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIP--NSSIHWKYAEKMSEE 175 (369)
Q Consensus 98 ~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 175 (369)
+........+..++++++.++...++|.+..+ +++.++...|+......+.+..... .... ...+.+..+.
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~-~~~~~~~~~~ 75 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGV-AIVQMVQSSA 75 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhH-eeeecCCCCc
Confidence 34445667788889999999888888888555 8888888888876554322110000 0000 0000000000
Q ss_pred ccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHH----HHHh-cccc-cccc--cch
Q 037942 176 NSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVI----GLIV-ERKR-AAWK--LNA 247 (369)
Q Consensus 176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~-~~~~-~~~~--~~~ 247 (369)
..........|....+.+.++-+...+..++..++.+.. .|..........+. .... +.+. ..+. ...
T Consensus 76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (222)
T TIGR00803 76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY 151 (222)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC
Confidence 011123557788888888888888888888876653321 22222222211111 1111 1110 1111 111
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 248 TIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 248 ~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
+...+.+ ++...++..+..+.+++.++...+....++++++.+++++++||+++..++.|..+++.|++++
T Consensus 152 ~~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 152 PTAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred chHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 1122222 2345667778889999999999999999999999999999999999999999999999997653
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.84 E-value=2.9e-08 Score=77.44 Aligned_cols=108 Identities=20% Similarity=0.353 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHH
Q 037942 220 LMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWAL 299 (369)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 299 (369)
++...+.+.+..+.....+....++......+...+..|++....++.++.++.++.+ ..++++..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666555554333211122111223445555566666688999999999999 588899999999999999999
Q ss_pred hcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 300 FQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 300 ~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
++|+++..+++|.+++++|+.+..+.+-+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999876543
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.82 E-value=2e-08 Score=92.63 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=108.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC---------CH-HHHHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKI---------TW-PILFQ 74 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~~ 74 (369)
...|.++.++++++|+...+..|...++ +.++..+.++....+.+.++++....+....... .. ..+..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3569999999999999999999987661 3899999999999999999888765331110000 00 11111
Q ss_pred HHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942 75 IFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 152 (369)
.+..+.......+.+++.+++++++..+++.....|+++.++++++++|+++..+ ++|.++++.|+.+....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSRV 294 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHHH
Confidence 2233332323444677789999999999999999999999999999999999999 99999999999988743
No 57
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.6e-09 Score=92.30 Aligned_cols=276 Identities=18% Similarity=0.203 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHH
Q 037942 8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQ 87 (369)
Q Consensus 8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (369)
..++.+++-++.||+.+.+.... |=+|.+.+..-.+-+.++.+.+.++ . .|..+.+.+...++.|.+- ...+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~---~p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-V---SPELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-e---cCccchhhHHHHHHhhhHh-hhhh
Confidence 35788999999999988877543 5668887777666666666655444 2 2345677777777777766 8999
Q ss_pred HHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccce---ehhhhhhhhhhhhhhhcCccccCCCCC
Q 037942 88 VLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKV---FGTIICVGGAMVLSFYHGKTFGIPNSS 163 (369)
Q Consensus 88 ~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~---~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 163 (369)
...+.|+++.+++.+.++ ..++-+-+.+++++.++|=.+..+ +. +++++.++|+.+-...+
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~---------- 138 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQD---------- 138 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeec----------
Confidence 999999999999999999 666777799999999999666554 12 23334445555444322
Q ss_pred cchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 037942 164 IHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAW 243 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 243 (369)
.++..+++.++..+|+...+.+.+.|-.|.++.+.+.-+ .+....-+.....+..+.+...... ...
T Consensus 139 --------~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~ali~~~~~~~--~~~ 205 (288)
T COG4975 139 --------RNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGALILGFFKME--KRF 205 (288)
T ss_pred --------cccccccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHHHHhhcccc--cch
Confidence 123334456677899999999999999999998776532 2334333333333333333332211 011
Q ss_pred ccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhh----hHHHHHHHHHH
Q 037942 244 KLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGT----AIGSVLIVTGL 319 (369)
Q Consensus 244 ~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~----~~G~~li~~gv 319 (369)
+. ..+.-+..|++- .++..++..+-++.+.++.=.++.+..+++.+-++++++|+=|..| ++|.+++++|.
T Consensus 206 ---~K-~t~~nii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvga 280 (288)
T COG4975 206 ---NK-YTWLNIIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGA 280 (288)
T ss_pred ---HH-HHHHHHhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHh
Confidence 12 223333445543 4778888889999999999999999999999999999999998765 46888888887
Q ss_pred hhhee
Q 037942 320 YAVLW 324 (369)
Q Consensus 320 ~l~~~ 324 (369)
.+...
T Consensus 281 i~lg~ 285 (288)
T COG4975 281 ILLGI 285 (288)
T ss_pred hhhhe
Confidence 76644
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.70 E-value=3.4e-07 Score=75.45 Aligned_cols=133 Identities=20% Similarity=0.303 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC----C-------CHHH
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALDS------GMKPLVLVAYRQMFATLATIPFAYFIEWKTRPK----I-------TWPI 71 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~ 71 (369)
|.++++.+.++.+...+..|...++ +.++..+..+....+.+++.+.....+...... . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5788999999999999999988765 688999999999999999999888765433110 0 2244
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942 72 LFQIFLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV 148 (369)
Q Consensus 72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 148 (369)
+...+..|++. ...+...+..++++++...+++.....+.+.++++++++|+++..+ ++|+++++.|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 55555566666 7888999999999999999999999999999999999999999998 9999999999875
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.66 E-value=7.8e-07 Score=83.57 Aligned_cols=140 Identities=15% Similarity=0.090 Sum_probs=104.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHh
Q 037942 183 LILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCS 262 (369)
Q Consensus 183 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 262 (369)
+..-..+.+.--.+-..++...|...+..+-|+.++.+++.++.+.+..+......+.+... ..+..+..++.+|++..
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL 125 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence 44444555555555566777888888876548999999999998776544322111111121 12225667777777654
Q ss_pred HHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 263 ALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
..+...+.++++.+++.++++..++|++++++++++++|+++..++.|.+++++|+.+...
T Consensus 126 -~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 126 -FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred -HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 4566677999999999999999999999999999999999999999999999999998764
No 60
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.65 E-value=4.1e-07 Score=80.16 Aligned_cols=143 Identities=13% Similarity=0.148 Sum_probs=114.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccc-cchhhHHHHHHHHHHH
Q 037942 182 NLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWK-LNATIRLVSALYSGIV 260 (369)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~ 260 (369)
....|+++++.|.+.|+..-.+.|.+.+. ++.....++.+.+..+++.+.....+...-+. ...+..+..+...+++
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 34589999999999999999999887544 56889999999998887766665443221122 2223355555555554
Q ss_pred HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
....+..+.++.++.....+|.-.+++|++.+++|.++++|+++..|++..++..+|+....+...
T Consensus 82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 457889999999999999999999999999999999999999999999999999999998876543
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.62 E-value=5.8e-07 Score=82.22 Aligned_cols=129 Identities=13% Similarity=0.173 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhh
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQM----FATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTG 82 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 82 (369)
.+|+++.+++.+.++...+..|.. +.+|...++.+.. .+.+++.++ + +.++ .+.+.....++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHHH
Confidence 679999999999999999999965 3788888655555 334333333 1 1122 2334444555588885
Q ss_pred hHHHHHHHHHHhc-ccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccce----ehhhhhhhhhhhhhh
Q 037942 83 ATGNQVLYFVGLE-NSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKV----FGTIICVGGAMVLSF 151 (369)
Q Consensus 83 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~l~~~ 151 (369)
.+.+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.++++ + +|.++.+.|+.++..
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI 288 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence 899999999999 9999999999999999999999999999999999 9 999999999988763
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.58 E-value=6.3e-07 Score=69.31 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=63.0
Q ss_pred HHHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 76 FLCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 76 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++.++ ++|+.++++|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 334446668899999999999999999999889999999999999999999998 999999999999876
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.57 E-value=1.2e-06 Score=79.77 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVA-YRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG 85 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (369)
..|.++.++++++|+...+..|... . .++..... +.......+..+. ...... .....+.+......|++....
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLF--FLSGFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999766 3 67777666 4443222222222 211121 345678899999999999668
Q ss_pred HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
.+.+++.++++.+++.++++..+.|++..++++++++|+++..+ ++|+.+.+.|+.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~ 287 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 9999999999988874
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.54 E-value=7.8e-07 Score=68.81 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=61.7
Q ss_pred HHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 257 SGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 257 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
.++++..++++++..++++.|.+.+.++.++.++.+.+++++++||++++.+++|.+++++|+.+..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445677899999999999999999999999999999999999999999999999999999998764
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.41 E-value=2.9e-06 Score=78.18 Aligned_cols=141 Identities=11% Similarity=0.034 Sum_probs=113.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCH--HHHHHHHHHHHhh
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITW--PILFQIFLCSVTG 82 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~ 82 (369)
+..+|-++++++++++|.+.++-+...++ .+...+..+--+.+.++..+.+...+++.....+| +....++..+++.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence 46889999999999999999999998886 89988888888888888888777777665554433 3333222223333
Q ss_pred hHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 83 ATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
...+.+.-..+++.++....+-..+..++.++++++++|+++++.. .+|.+++++|.++....+
T Consensus 244 -f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 244 -FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAE 307 (334)
T ss_pred -HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccC
Confidence 5556667788889999888888889999999999999999999998 999999999999887543
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.41 E-value=3.6e-06 Score=66.77 Aligned_cols=119 Identities=15% Similarity=0.178 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHH
Q 037942 8 MPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQ 87 (369)
Q Consensus 8 ~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (369)
+++++.+++.++-+...++.|...++ .+........ ...+.. . .. -...+..|+..+.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~~~~~~-----~--~~---------p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--IAALLA-----F--GL---------ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--HHHHHH-----H--hc---------cHHHHHHHHHHHHHHH
Confidence 47888999999999999999998775 5433322111 000000 0 00 0125667888889999
Q ss_pred HHHHHHhcccchhhHHhhhhhhHHHHHHHHHH--hhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 88 VLYFVGLENSTPTIGCALTNILPAITFVLAVI--FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
.++..++++.|++.+..+.+..++++.+.++. ++||+++..+ ++|+++.++|++++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence 99999999999999999999999888888885 8999999998 9999999999999873
No 67
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.39 E-value=3.3e-06 Score=72.73 Aligned_cols=136 Identities=13% Similarity=0.047 Sum_probs=115.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATG 85 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (369)
...|..+++.+..+|+.+-+..|..-.. .+...-+..-+.+++++.+|+........ -.++......+.++++..++
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence 4578999999999999999999987654 67777788899999999999876532221 24566777778899999999
Q ss_pred HHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 86 NQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
.+.+-..++++.|....+++.++.|.+.++.++++++|+++..| |+++...+.+..=..
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~ 281 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST 281 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999 999988887766333
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.13 E-value=3.8e-05 Score=59.78 Aligned_cols=69 Identities=16% Similarity=0.294 Sum_probs=59.4
Q ss_pred HHHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 258 GIVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 258 gi~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
.+.+.+++++++..++++.+.+.+=.+ ..+..+.+.+++++++||++++.+++|+.++++|++......
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344567899999999999998877666 468899999999999999999999999999999999885544
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.09 E-value=1.8e-06 Score=74.78 Aligned_cols=139 Identities=14% Similarity=0.195 Sum_probs=101.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIV 260 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 260 (369)
+....|..+...+ ..+...++..++...+ +|......+++.-.+...|..+...... +.......|. +.=|+.
T Consensus 34 d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~L--iLRg~m 106 (346)
T KOG4510|consen 34 DKPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWL--ILRGFM 106 (346)
T ss_pred CCCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEE--Eeehhh
Confidence 3667899888888 7778888888887766 5566666665555555555544332221 2222221222 122443
Q ss_pred HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
+ ..+..+.++++++.+-+.+..+...+|+++.++++.+++|+.+..+..|..+.+.|++++.+..-
T Consensus 107 G-~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 107 G-FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred h-hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 3 35677888999999999999999999999999999999999999999999999999999876543
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.98 E-value=0.00018 Score=66.26 Aligned_cols=130 Identities=13% Similarity=0.075 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhhhhC-CC--chHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHHH
Q 037942 196 SWAAWVIIQTKLSKKF-PA--PYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVWS 272 (369)
Q Consensus 196 ~~a~~~v~~~~~~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a 272 (369)
++..+.++++++.++. .. +..+++.++....+...+.......+. .+. ..+......++ ...++..+.+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~-~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--SRK---IPLKKYAILSF-LFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--CCc---ChHHHHHHHHH-HHHHHHHHHHHH
Confidence 4445667777776542 23 678888888888877766655443111 111 12333334444 456788899999
Q ss_pred HhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCCC
Q 037942 273 IQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKELK 331 (369)
Q Consensus 273 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~~ 331 (369)
+++.+.....+.....|+.++++++++++++.+..++.+.+++.+|+.+....+.++.+
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999887655443
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.90 E-value=5.8e-05 Score=58.02 Aligned_cols=68 Identities=22% Similarity=0.436 Sum_probs=58.3
Q ss_pred HHHhHHHHHHHHHHHhccCcceeeeh-hhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 259 IVCSALAFCLIVWSIQRKGPLYVSVF-SPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
+++..++++++..++++.|.+.+=.+ ..+..+.+.+++++++||++++.+++|+.++++|++..+..+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 34567899999999999998776555 557888999999999999999999999999999999986544
No 72
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.85 E-value=0.00018 Score=63.96 Aligned_cols=117 Identities=11% Similarity=0.095 Sum_probs=89.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhH
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGAT 84 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (369)
+..+++..++++.+.+..+.++.|.. ++++....+-+.+--.+.-.++....+ ++...|...+-++.|++- .
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~----~~~~~k~~~~nil~G~~w-~ 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSK----KPFFEKKSWKNILTGLIW-G 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhccc----ccccccchHHhhHHHHHH-H
Confidence 34679999999999999999998873 377877776655444444444433321 122334445556677776 8
Q ss_pred HHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccc
Q 037942 85 GNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKT 129 (369)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~ 129 (369)
..+.+++.|.+....+.+-.+.++.+++..+.+.+++||+=++++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 999999999999999999999999999999999999999988876
No 73
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.84 E-value=0.0057 Score=55.80 Aligned_cols=301 Identities=12% Similarity=0.132 Sum_probs=176.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH-Hhhhc----CCCCCCHHHHHHHHHHH
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAY-FIEWK----TRPKITWPILFQIFLCS 79 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~g 79 (369)
.-..|+++..++.++-|..++-.|...+ .+-...=....+++.+++ |+.. +..-+ .....+........+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 3468999999999999999999997543 553333333444444433 3322 11111 11123456666777778
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhcccc-ccccCCccceehhhhhhhhhhhhhhhcCccc
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVA-IKTKPGQAKVFGTIICVGGAMVLSFYHGKTF 157 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~ 157 (369)
++- .+....|-.+++|+..+..+-+ ..+.-++..++-.++.++--. ..+.-++.-++|++++++|+.+........+
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 876 7888999999999999988544 777778877777776442100 0011134458999999999999885322111
Q ss_pred cCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhh-------hhCCCchH----HHHHHHHHHH
Q 037942 158 GIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLS-------KKFPAPYT----CTTLMCLISS 226 (369)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~~----~~~~~~~~~~ 226 (369)
++ ...+.++.+..+|++.++++++.-+++++-...-. +...+|+. .....+..+.
T Consensus 160 ------------~~--~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf 225 (344)
T PF06379_consen 160 ------------KE--LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGF 225 (344)
T ss_pred ------------hh--hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHH
Confidence 00 11122346778999999999999999888764321 11112222 1222233333
Q ss_pred HHHHHHHHHhc---cccc---ccccc-h--hhHHHHHHHHHHHHhHHHHHHHHHHHhccCc----ceeeehhhHHHHHHH
Q 037942 227 IMCSVIGLIVE---RKRA---AWKLN-A--TIRLVSALYSGIVCSALAFCLIVWSIQRKGP----LYVSVFSPLLLVIVA 293 (369)
Q Consensus 227 i~~~~~~~~~~---~~~~---~~~~~-~--~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~----~~~s~~~~~~pv~~~ 293 (369)
+.-+.+.+... ++.. +.... + .......+..|++- ..++++|-++-.+.+. .--.+.+.+..+++-
T Consensus 226 ~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lW-y~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~sn 304 (344)
T PF06379_consen 226 ITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLW-YSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSN 304 (344)
T ss_pred HHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHH
Confidence 33344433321 2221 11111 1 11233333334433 3566666666666653 345567788888888
Q ss_pred HHHHHHhcCc------cchhhhHHHHHHHHHHhhheec
Q 037942 294 IVSWALFQEK------LFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 294 l~~~~~~~e~------~~~~~~~G~~li~~gv~l~~~~ 325 (369)
+++. +++|- .-..-+.|+++++.+++++-++
T Consensus 305 vwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 305 VWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 8885 56663 2345678999999988876543
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.83 E-value=0.00045 Score=55.60 Aligned_cols=132 Identities=13% Similarity=0.162 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA 265 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 265 (369)
..++++.++.+-++...+.-++.++..+|+..+++.+..+.+.+..+..+.++. .........|+..+ -|++ ....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence 457889999999999999999988877789999999999999988877766553 22222222344433 2443 4456
Q ss_pred HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHH----HhcCccchhhhHHHHHHHHHHhh
Q 037942 266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWA----LFQEKLFIGTAIGSVLIVTGLYA 321 (369)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~----~~~e~~~~~~~~G~~li~~gv~l 321 (369)
..+....+++.+++....+.. -+.+.+.+++.+ .-++++++.+++|.+++++|+.+
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 667778889988877665544 466667778876 34567899999999999999864
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.74 E-value=0.00015 Score=66.39 Aligned_cols=121 Identities=20% Similarity=0.211 Sum_probs=88.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCC-chHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPA-PYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGI 259 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 259 (369)
.+...|..+++.++++.+....++|+-..+.+. ..... .+....+. ++ .|+. |.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------------------~~~~~~l~--~~-~W~~----G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------------------SGGRSYLR--RP-LWWI----GL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------------------chhhHHHh--hH-HHHH----HH
Confidence 456789999999999999999999987655221 00000 00000011 11 2332 22
Q ss_pred HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
+...++..+...++...|++.++++..+..++..+++..+++|+++..++.|+++++.|..+.....
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 2334556667789999999999999999999999999999999999999999999999988776544
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.71 E-value=0.00068 Score=54.55 Aligned_cols=139 Identities=13% Similarity=0.152 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhH
Q 037942 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSA 263 (369)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 263 (369)
....++++.++++-.+..-..-++.+..++|....++.+..+.+.+..+.++.+. .+.+.......|+..+. |+++ .
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~G-G~lG-a 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWIG-GLLG-A 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHHc-cchh-h
Confidence 4677889999999999999999988887788999999999999998888777433 22233223324554443 3332 2
Q ss_pred HHHHHHHHHHhccCc-ceeeehhhHHHHHHHHHHHHHhc----CccchhhhHHHHHHHHHHhhheec
Q 037942 264 LAFCLIVWSIQRKGP-LYVSVFSPLLLVIVAIVSWALFQ----EKLFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 264 ~~~~~~~~a~~~~~~-~~~s~~~~~~pv~~~l~~~~~~~----e~~~~~~~~G~~li~~gv~l~~~~ 325 (369)
+-.+.......+.++ ........-+.+.+.+++.+=+. .+++...++|.+++++|+++....
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 222333344555554 44555666677777888776443 567999999999999996665443
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.66 E-value=0.00048 Score=52.72 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=57.1
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhh
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVL 149 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 149 (369)
+.++..++.+...++++.|.+.+-.+ .....+.+.+++++++||++++.+ ++|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 34447888999999999999999666 778889999999999999999998 99999999999876
No 78
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.60 E-value=0.0013 Score=50.37 Aligned_cols=64 Identities=17% Similarity=0.291 Sum_probs=54.9
Q ss_pred HHhHHHHHHHHHHHhccCccee-eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 260 VCSALAFCLIVWSIQRKGPLYV-SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
.+..+++++...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|+.+++.|++..+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3457899999999999987654 555568888899999999999999999999999999998764
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.52 E-value=0.00041 Score=52.74 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=56.3
Q ss_pred HHHhHHHHHHHHHHHhccCccee-eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 259 IVCSALAFCLIVWSIQRKGPLYV-SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
+.+..+++++...++|+.|.+.+ ++...+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34557899999999999987654 5555688899999999999999999999999999999998754
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.52 E-value=0.0013 Score=52.90 Aligned_cols=130 Identities=8% Similarity=0.041 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 10 FLAMVTVQLGYAGMNFTSKLALDSGMK-PLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
.++.+++-.+-+....+.....+. .+ |...+++-+..+.+++..+....+++.....+...|+ ...-|+++ +..-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence 456677777778877777666665 65 9999999999999999888888665433222222222 33366777 78888
Q ss_pred HHHHHhcccchhhHHhhhhh-hHHHHHHHHHH----hhhccccccccCCccceehhhhhhhhhhh
Q 037942 89 LYFVGLENSTPTIGCALTNI-LPAITFVLAVI----FRQEYVAIKTKPGQAKVFGTIICVGGAMV 148 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l~~~-~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 148 (369)
+........+++.+..+.-+ +-+...++..+ ..|+++++.+ .+|+.+.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 88899999999988877444 44556666665 3567777776 9999999999864
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.51 E-value=0.00038 Score=52.44 Aligned_cols=66 Identities=23% Similarity=0.318 Sum_probs=56.8
Q ss_pred HhHHHHHHHHHHHhccCcce-eeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 261 CSALAFCLIVWSIQRKGPLY-VSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
+..++|++...++|+.|... .++..-+-.+.+.+.++++|+|+.+..+++|..++++|++..+..+
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 45688999999999988654 5667778888899999999999999999999999999999886543
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.43 E-value=0.0003 Score=54.82 Aligned_cols=68 Identities=12% Similarity=0.150 Sum_probs=60.6
Q ss_pred HHHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 78 CSVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
..+..+..++.++..++++.|.+.+-.+ ..+.-+.+.++++++++|+++..+ ++|+.+.++|++++-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 3455557899999999999999999877 578999999999999999999998 9999999999988864
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.43 E-value=0.00036 Score=53.66 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=59.9
Q ss_pred HHhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 79 SVTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
.+.++.+++.++..++++.|.+.+-.+ ..+.-+.+.+++++++||++++.+ ++|+.+.++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 355557888899999999999999777 778899999999999999999998 9999999999999864
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.40 E-value=0.00038 Score=53.37 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHH
Q 037942 14 VTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYFVG 93 (369)
Q Consensus 14 l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 93 (369)
++..++||.++++.|...+. .++..-.. |..-.... + .+.|.+.+ .++..-.+...|+..
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHHH
Confidence 45678999999999998874 55443331 31111111 0 11122222 222224566788999
Q ss_pred hcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhh
Q 037942 94 LENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVL 149 (369)
Q Consensus 94 l~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 149 (369)
+...+.+.+.++ .++.=++|++.++++.+|..+++. ++|+.+.++|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 999999999999 588888999999888877778777 99999999998764
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.00038 Score=52.43 Aligned_cols=65 Identities=18% Similarity=0.223 Sum_probs=58.2
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
+.++.+++.+...|++++|.+.+-.+ ...-.+.+.+.++++++|+++..+ ++++.+.++|++.+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 44457888999999999999999655 888999999999999999999998 999999999998775
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.31 E-value=0.0017 Score=49.40 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=58.2
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
+.++..++.+...++++.|.+.+-.+ .....+.+.+++++++||++++.+ ++|+.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 44457888999999999999999666 778999999999999999999998 999999999999874
No 87
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.29 E-value=0.0012 Score=58.62 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 252 VSALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 252 ~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
+.+..-++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+.+..||++..+.++|+.+........
T Consensus 18 ~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 18 LKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 33333344 367888899999999999999999999999999999999999999999999999999999987766544
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.25 E-value=0.0012 Score=60.52 Aligned_cols=143 Identities=11% Similarity=0.140 Sum_probs=115.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCCCHHHHHHHHHH
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALDS---GMKPLVLVAYRQMFATLATIPFAYFIEW---KTRPKITWPILFQIFLC 78 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~~---g~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 78 (369)
+...|-++++++++++|...++.|.-.++ +++--.+..+--++..++++|..+.... .+..-++..+....++.
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 34789999999999999999999987653 3565555566666677777765554332 22223455566677888
Q ss_pred HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
++++.+++.++|..|.-.+++-.+++-..++....++...++.+.++++.. ++|...+++|.+++...+
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNISS 392 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheeccc
Confidence 999999999999999999999999999999999999999999999999998 999999999999887543
No 89
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.24 E-value=0.0023 Score=56.69 Aligned_cols=191 Identities=12% Similarity=0.070 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
|+++.+++++++|.+++-.|.. +. -|++.+-++......+.-+++..+.. .+ +.+.+..+-|.+- +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence 5788999999999999999964 44 57777666666555555555444422 22 2234455555655 88889
Q ss_pred HHHHHhcccchhhHHhhhhh-hHHHHHHHHHH-hhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCC--c
Q 037942 89 LYFVGLENSTPTIGCALTNI-LPAITFVLAVI-FRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSS--I 164 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l~~~-~pi~~~ll~~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~--~ 164 (369)
+-.-.++.+..+....+-++ +-+..-..+.+ +++++..... -.....+|++++++|..+...-+.++....++. .
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999998665 34444444443 3433222111 123458899999999888876544331110000 0
Q ss_pred chhhh-----hcc---cccccC-----CCccchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037942 165 HWKYA-----EKM---SEENSG-----NKSNLILGSIAIIASSISWAAWVIIQTKLSKK 210 (369)
Q Consensus 165 ~~~~~-----~~~---~~~~~~-----~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 210 (369)
....+ ++. .++.+. ...+...|..+++++++.|+...+=..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 00011 011 001111 11257789999999999999988877777655
No 90
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.18 E-value=0.00068 Score=61.99 Aligned_cols=137 Identities=17% Similarity=0.224 Sum_probs=111.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHHHhhhcCC---C--CCCHHHHHHHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALD---SGMKPLVLVAYRQMFATLATI-PFAYFIEWKTR---P--KITWPILFQIF 76 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~---~g~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~~ 76 (369)
...|...++.+.+..+...++.|.... ..++++.......-++.++++ |+....+.... . ..+.. ....+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 568999999999999999999999883 248899999998889988888 88776554332 1 12333 33334
Q ss_pred HHHHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 77 LCSVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
+.+++. .+.|..-|..+.++++-.-++....--+++.+.++++++++++..+ .+|..++++|+.+-.
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence 444665 6777888999999999999999999999999999999999999999 999999999999765
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.13 E-value=0.0033 Score=46.89 Aligned_cols=56 Identities=23% Similarity=0.283 Sum_probs=34.9
Q ss_pred HHhHHHHHHHHHHHhccCcceeee-hhhHHHHHHHHHHHHHhcCccchhhhHHHHHH
Q 037942 260 VCSALAFCLIVWSIQRKGPLYVSV-FSPLLLVIVAIVSWALFQEKLFIGTAIGSVLI 315 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li 315 (369)
.+..++++++..++++.+.+.+=. ...+..+.+.+.+.+++||++|+.+++|+.+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 356789999999999999888855 45699999999999999999999999999875
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.03 E-value=0.0016 Score=57.67 Aligned_cols=132 Identities=18% Similarity=0.084 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA 265 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 265 (369)
|.+.++.|+++++...+=.|+.... |++....+++....+......+..+.+ .+. + +.++. |. .-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f~--p----~amlg-G~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PFY--P----WAMLG-GA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cce--e----HHHhh-hh-hhhcC
Confidence 5678899999999999988887533 777777777776666665555543321 111 1 11111 11 12344
Q ss_pred HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHH-HhcCcc-----chhhhHHHHHHHHHHhhheecCCCC
Q 037942 266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWA-LFQEKL-----FIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~-~~~e~~-----~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
..+-.-.++..+-...-.+-. .+.+.+...+.+ +||+++ ++..++|.+++++|..++..-|.+.
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 445555666666555444433 366777776655 555443 5689999999999999887766554
No 93
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.93 E-value=0.014 Score=52.13 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=112.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHHH
Q 037942 5 DDLMPFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-----KITWPILFQIFLC 78 (369)
Q Consensus 5 ~~~~g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 78 (369)
+...|++++....++=|+.+..-....+ .++++.++++.-.+..++.-....... ...++ +.++.-++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHH
Confidence 4578999999999999998888776655 368899999988888888777664332 22222 2355667778888
Q ss_pred HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942 79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 152 (369)
+.++ +.++.+.+.-++.-++-.-+.+..+--++..+++.+.++.+++..| |+|+++.+.|+.+=.+.
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL 314 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence 8888 8888888888988888888888889999999999999999999999 99999999999876643
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.63 E-value=0.012 Score=43.81 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=34.5
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhh
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTII 141 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l 141 (369)
+..+..+..++..++++.|.+.+-.+ ..+..+.+.+.+.+++||+++..+ ++|+.+
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 43557888999999999999999666 679999999999999999999998 888765
No 95
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.51 E-value=0.085 Score=49.07 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=92.2
Q ss_pred chHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHH-HHHHHHhhhcCCC-------CC
Q 037942 6 DLMPFLAMVTVQLGYAGMN-------FTSKLALDSGMKPLVLVAYRQM---FATLAT-IPFAYFIEWKTRP-------KI 67 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~-------~~~k~~~~~g~~~~~~~~~r~~---~~~l~l-~~~~~~~~~~~~~-------~~ 67 (369)
..||++.++++.+..+... +..+.....|.++.....-.++ ++..+. .+++.++.+++++ ..
T Consensus 172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~ 251 (345)
T PRK13499 172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL 251 (345)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence 4789999999999999988 6666544456776665555554 443333 3333332222111 11
Q ss_pred C----HHHHHHHHHHHHhhhHHHHHHHHHHhcccchhhHHh---hh-hhhHHHHHHHHHHhhhccccccccCCccceehh
Q 037942 68 T----WPILFQIFLCSVTGATGNQVLYFVGLENSTPTIGCA---LT-NILPAITFVLAVIFRQEYVAIKTKPGQAKVFGT 139 (369)
Q Consensus 68 ~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~ 139 (369)
+ .+......+.|++- ...+.+|..+-...+.+...+ +. ++..++..+.+. ++||+=+..+++.+.-++|+
T Consensus 252 ~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~ 329 (345)
T PRK13499 252 AKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGC 329 (345)
T ss_pred cchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHH
Confidence 2 23333345566665 777888888888876655544 55 666688888887 59998773333345557888
Q ss_pred hhhhhhhhhhhhh
Q 037942 140 IICVGGAMVLSFY 152 (369)
Q Consensus 140 ~l~~~Gv~l~~~~ 152 (369)
++.++|..++.+.
T Consensus 330 vliI~g~~lig~~ 342 (345)
T PRK13499 330 VVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHhhc
Confidence 8888888888753
No 96
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.36 E-value=0.0029 Score=54.73 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALA 265 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 265 (369)
..+.+++=++.|+..-....|... .|.+.+.-+.+.+.++.+.+.++..+ . . ....+..-+..|.+-+ ++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p-~--~---T~~~~iv~~isG~~Ws-~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP-E--L---TLTIFIVGFISGAFWS-FG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC-c--c---chhhHHHHHHhhhHhh-hh
Confidence 567888999999988887766543 45666666666666665555554222 1 1 1123454555566554 78
Q ss_pred HHHHHHHHhccCcceeeehhh-HHHHHHHHHHHHHhcCccchhhhH----HHHHHHHHHhhheecCCCC
Q 037942 266 FCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWALFQEKLFIGTAI----GSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~~~~~~----G~~li~~gv~l~~~~~~~~ 329 (369)
+....+++++.+.+++.+++. .+.+-+.+++++.|+|-.+..+++ +.++++.|+++..+.++.+
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n 141 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN 141 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence 888999999999999998865 677788899999999999876543 5677888888877766543
No 97
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.27 Score=45.26 Aligned_cols=142 Identities=19% Similarity=0.139 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhCC---CchHHHHHHHHHHHHHHHHHHHHhccc--------ccccccchhhHHHH
Q 037942 185 LGSIAIIASSISWAAWVIIQTKLSKKFP---APYTCTTLMCLISSIMCSVIGLIVERK--------RAAWKLNATIRLVS 253 (369)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 253 (369)
.=.+..+...+-++......|+..++.. .|.+..+..-+.-.+++....+..++. ...+....+.....
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3344445555556666666666554321 346666666666666666665544211 01111111112222
Q ss_pred HHHHHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 254 ALYSGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 254 l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
+..-+. ...+.+.+++.++.+.++++..+...+..+.+.++.+++++++.+..||...++...|+.+......
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 222222 3567777889999999999999999999999999999999999999999999999999999974433
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.28 E-value=0.016 Score=44.43 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhHHHHHHHHH
Q 037942 192 ASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSALAFCLIVW 271 (369)
Q Consensus 192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~ 271 (369)
+.+++|++.+-+.|+-.+...+.-.- . + ...-... ++. .|-..+ ....+..+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~-~~~~~~~----Ll~-------------n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-Q-LLQEIKF----LLL-------------NPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-H-HHHHHHH----HHH-------------hHHHHH--HHHHHHHHHHHHHH
Confidence 45788999999999988764422211 1 1 1111111 100 111111 22234566678888
Q ss_pred HHhccCcceeeehh-hHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 272 SIQRKGPLYVSVFS-PLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 272 a~~~~~~~~~s~~~-~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
.+.+.+-+.+.++. .+.-+++.+.++++.+|..+...++|+.+++.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999995 8999999999988777778889999999999998754
No 99
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.03 E-value=0.024 Score=49.62 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV 148 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 148 (369)
+....+....+++.++...+....+.++++.+++.++++|+++..+ ++|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence 6666778899999999999999999999999999999999999999 9999999988754
No 100
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.73 E-value=0.16 Score=41.00 Aligned_cols=137 Identities=7% Similarity=-0.020 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGN 86 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (369)
...+++.+++-.+-.....+.-...+..=+|....+.-+..+.+++..+.+..+++.......+.-++.+.-|+++ +..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence 4566777777777777777776655542359999999999999998888877433322221122223334445555 555
Q ss_pred HHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhh----ccccccccCCccceehhhhhhhhhhhhh
Q 037942 87 QVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQ----EYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 87 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~----e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
-...........++....+ ..-+-+...++..+=.. .+++.. |++|+++.++|+.++.
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~~ 145 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLAR 145 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHhc
Confidence 5555555566655555444 45555556666554322 444444 5999999999955543
No 101
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.62 E-value=0.0062 Score=54.88 Aligned_cols=126 Identities=24% Similarity=0.202 Sum_probs=92.6
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHH
Q 037942 180 KSNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGI 259 (369)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 259 (369)
..++..|..+++.+.+..+....+.|+-.++... ..-+ ..+....... .+ .||. |+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r-------------a~~gg~~yl~--~~-~Ww~----G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR-------------AGEGGYGYLK--EP-LWWA----GM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc-------------ccCCCcchhh--hH-HHHH----HH
Confidence 4567789999999999999999999887665211 0000 0011111111 12 3333 44
Q ss_pred HHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 260 VCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
+...++-...+.+....|++.+++++.++.+++.+++..+++|++++.-.+|+.+.++|-..+.....++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 5556677777778888999999999999999999999999999999999999999999988776655443
No 102
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.74 E-value=0.022 Score=47.66 Aligned_cols=65 Identities=11% Similarity=0.178 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 264 LAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
.+.+.|..+++..+++.++.+..-+-.+..+++++++|+++...+++..++.+.|+++..+.++.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 46678999999999999999999999999999999999999999999999999999998876654
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.21 E-value=1 Score=40.89 Aligned_cols=135 Identities=12% Similarity=0.068 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCchH--HHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhH
Q 037942 186 GSIAIIASSISWAAWVIIQTKLSKKFPAPYT--CTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSA 263 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 263 (369)
....++.-+++-.+..+..|.....++-|.. ....+.+.+.+.....-...--+.++.+......|..+-.+ ..
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~l----f~ 88 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLL----FV 88 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHH----HH
Confidence 3444444445555555666766666553344 44488888877766555432223333333222233332221 11
Q ss_pred HHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhee
Q 037942 264 LAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~ 324 (369)
...+.-.+++++.+.....++....|+++.+....+++..++...+.....+++|......
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 2333444789999999999999999999999999999999999999999999999876654
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.29 E-value=0.38 Score=41.64 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHHHHH
Q 037942 7 LMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEWKTRP-----KITWPILFQIFLCSV 80 (369)
Q Consensus 7 ~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~ 80 (369)
..|-++++++..+-|.....-.....+ .-+..++++.-.+-+.+.+..-.++.. ..+. ......|.-+...++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG-ElweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG-ELWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh-hHHHHHHHHHhccHHHHHHHHHHH
Confidence 467788888888888877765433221 123334444444444443332221110 0000 012345666777888
Q ss_pred hhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 81 TGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
++ ++++++.+.-..+-+|-.-+++..+--+|+.++++++++.+++.+| |+|.++.+.|...=..
T Consensus 250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV 313 (337)
T ss_pred HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence 88 8999999999999999999999999999999999999999999999 9999999999887664
No 105
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.06 E-value=0.34 Score=42.94 Aligned_cols=144 Identities=17% Similarity=0.090 Sum_probs=100.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhh----cCCCC-CCHHHHHHHHHHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALDS-GMKPLVLVAYRQMFATLATIPFAYFIEW----KTRPK-ITWPILFQIFLCS 79 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~-~~~~~~~~~~~~g 79 (369)
...|.++.+++.+.-+.+.+..|..... |=..+.++++..+.+.++++|.....+. ...++ +..+.|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4579999999999999999999976553 2237888999999999999998776431 11122 3567777778888
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCcc
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKT 156 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~ 156 (369)
++++.+++.. .+=++-++|-.-.+-..--...=.++++.+++|..+... |-+-++.+.|-..-..-++.+
T Consensus 263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~~e 332 (347)
T KOG1442|consen 263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKEHE 332 (347)
T ss_pred HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHHHH
Confidence 8885554422 233344554443333333444556788889999998887 999999999988877654433
No 106
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.19 E-value=0.44 Score=35.61 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChHHH--HHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHH
Q 037942 11 LAMVTVQLGYAGMNFTSKLALDSGMKPLVL--VAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQV 88 (369)
Q Consensus 11 ~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~--~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (369)
.-++...++||..+.+.|.... |.+..-- ..+|.+ .++.+.. -.+++++...+ ++.+ ...
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~-----------lqe~~tl-~l~w~Y~iPFl----lNqc-gSa 67 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIA-----------LQEMKTL-FLNWEYLIPFL----LNQC-GSA 67 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHH-----------HHHHHHH-HHhHHHHHHHH----HHHh-hHH
Confidence 3467788999999999998765 2321110 111111 1111111 12333333322 2212 236
Q ss_pred HHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 89 LYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 89 ~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
+||.-+++.+.+.+..+ .++.-.|+.+.+..+ +|+...+. -++|..+..+|+.+.+
T Consensus 68 ly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence 77899999999999888 566777888888775 55544332 2899999999987654
No 107
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.86 E-value=0.59 Score=40.15 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHhhh
Q 037942 9 PFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP----KITWPILFQIFLCSVTGA 83 (369)
Q Consensus 9 g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~ 83 (369)
|++.+...++.-+..-...|.-.+ ++..-+..+++.-+++..+++.+-+..+.+... ..+.....+.++.|++.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s- 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS- 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence 444444444444444444554433 246688889999999999998887776533221 23334455677778877
Q ss_pred HHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh
Q 037942 84 TGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 152 (369)
++-.++--+..+-++...-+++..+.-.-..+-+.++++|+.+... ..++++++....+-.+.
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYava 297 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAVA 297 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHHH
Confidence 6666788899999999999999999999999999999999999987 99999988877766643
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=91.68 E-value=2.1 Score=38.76 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=83.4
Q ss_pred HHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccc--cccchhhHHHHHHHHHHHHhHHHHHHHHHHHhccCccee
Q 037942 204 QTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAA--WKLNATIRLVSALYSGIVCSALAFCLIVWSIQRKGPLYV 281 (369)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~ 281 (369)
.+...++++-|+..+..+..+-.......-...+...+. -...+....--+.-.|+ +++.-..+.++++++++.+..
T Consensus 35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY 113 (349)
T KOG1443|consen 35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY 113 (349)
T ss_pred hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence 344444555567777766665544443333333221111 01111112222233344 567888899999999999999
Q ss_pred eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 282 SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 282 s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
++.-...+++..+++.++-=|++++....=..+|-+|+.+..+.+.
T Consensus 114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 9999999999999999999999999998888899999998887653
No 109
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.66 E-value=1.3 Score=40.83 Aligned_cols=145 Identities=12% Similarity=0.012 Sum_probs=88.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh--ccccc-ccccchhhHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV--ERKRA-AWKLNATIRLVSALYS 257 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~ 257 (369)
.+-..|+++..++++|.+.+.+-.||..+- + ++.......+-+-+..|..... .++.. .....+...+......
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 345789999999999999999999997532 2 4433333333333334433322 22221 1222222244444555
Q ss_pred HHHHhHHHHHHHHHHHhccCcce-eeehhhHHHHHHHHHHHHHhcC-------ccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 258 GIVCSALAFCLIVWSIQRKGPLY-VSVFSPLLLVIVAIVSWALFQE-------KLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 258 gi~~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~~e-------~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
|++- .++-..|-.+++|++.+. .++..-+..++..++--++.++ +-....++|.++.++|+.+..+...++
T Consensus 80 G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 6654 467778888999988654 3445556666666665555432 223467889999999999887665443
No 110
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=89.48 E-value=0.19 Score=45.20 Aligned_cols=131 Identities=13% Similarity=0.077 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHh-cc----------cccccccchhhHHHHHHHHHH
Q 037942 191 IASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIV-ER----------KRAAWKLNATIRLVSALYSGI 259 (369)
Q Consensus 191 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~----------~~~~~~~~~~~~~~~l~~~gi 259 (369)
+++.+||+-+-..+|-..++..- .+..+|-+.++.++..++..+. +. ...+....++..+...+.-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 56788999999988887665322 2234444444444333322211 11 112222333334444444454
Q ss_pred HHhHHHHHHHHHHHhccCcceeeehhh-HHHHHHHHHHHHHhcCccc--hhhhHHHHHHHHHHhhhee
Q 037942 260 VCSALAFCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWALFQEKLF--IGTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~--~~~~~G~~li~~gv~l~~~ 324 (369)
+ --++..+..+++...+.+..-++.. +..++++++.|+. +.+.+ ...+.|..++++++++-..
T Consensus 81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHH
Confidence 4 4578889999999888776665542 3334455555543 44433 3566788888888877643
No 111
>PRK02237 hypothetical protein; Provisional
Probab=88.85 E-value=2.3 Score=32.11 Aligned_cols=47 Identities=9% Similarity=0.186 Sum_probs=40.7
Q ss_pred eeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 281 VSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 281 ~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
.+.+.-.-.+.++++.+.+-|++|+...++|.++.++|+.++.+..|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 45667777888999999999999999999999999999988876554
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=87.13 E-value=1.1 Score=33.73 Aligned_cols=46 Identities=13% Similarity=0.270 Sum_probs=39.4
Q ss_pred eehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 282 SVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 282 s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
+.+.-.-.+.++++++.+-+++|+...++|..+.++|+.++.+..|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4455666778899999999999999999999999999998877654
No 113
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=86.48 E-value=4.1 Score=36.31 Aligned_cols=140 Identities=14% Similarity=0.092 Sum_probs=95.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC------CCCHHHHHHHHHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYFIEWKTRP------KITWPILFQIFLC 78 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~------~~~~~~~~~~~~~ 78 (369)
+..|+.+.-.+.++-+...-+-....+ ++-+...++++-+.++.++++........ ..+ .-+++.+...++.
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~ 266 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLF 266 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHH
Confidence 345665555555555555444433333 34567888888888888888776655321 111 2356677777777
Q ss_pred HHhhhHHHHHHHHHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhc
Q 037942 79 SVTGATGNQVLYFVGLENSTPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYH 153 (369)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 153 (369)
+..+ .++...-..=++.-++..++.+...--.++.+++++++.++++.+. .-+.++.+.|+++=.+++
T Consensus 267 s~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 267 SLAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 7766 3443333333444667777777888888999999999999999998 888889999999888765
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=85.88 E-value=1.4 Score=39.24 Aligned_cols=65 Identities=12% Similarity=0.168 Sum_probs=56.6
Q ss_pred HhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheec
Q 037942 261 CSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~ 325 (369)
+-..+-.+.+.++..++++...++.-...+++.+++..+++..++..+|.|+..+.+|...+...
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 34455566677888899999999999999999999999999999999999999999998887654
No 115
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=85.82 E-value=0.84 Score=41.18 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc------CCC-------CCCHHHHHHHHHHH
Q 037942 13 MVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWK------TRP-------KITWPILFQIFLCS 79 (369)
Q Consensus 13 ~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~------~~~-------~~~~~~~~~~~~~g 79 (369)
|+++.+|||..+...|++..+ -...+...+-+.++.++..++.-+.-.. ..+ +-++......+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 457889999999999988765 3333457777777766655544332111 111 22455555555566
Q ss_pred HhhhHHHHHHHHHHhcccchhhHHhh-hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942 80 VTGATGNQVLYFVGLENSTPTIGCAL-TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV 148 (369)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 148 (369)
++. .+++.+..+|+.+...+.+-++ ..+.-+...++.++. ..|.++.. .-..|+.+.++.+++
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCce----EEEccHHHHHHHHHH
Confidence 665 8889999999999998888777 444445555555554 45544321 003355555554444
No 116
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=81.55 E-value=0.41 Score=42.02 Aligned_cols=142 Identities=15% Similarity=0.192 Sum_probs=98.7
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhh-CCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHH
Q 037942 180 KSNLILGSIAIIASSISWAAWVIIQTKLSKK-FPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSG 258 (369)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 258 (369)
..+.+.|..++=.=.+|-......+..+.++ ...|...++..+..-+++-.++..+..+. ... -|-.-+.++
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~~~----~~~hYilla 85 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---IKA----KWRHYILLA 85 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---HHH----HHHHhhhee
Confidence 3455566655554455555555555555544 34677888887777777777777754321 111 233333444
Q ss_pred HHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCC
Q 037942 259 IVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKE 329 (369)
Q Consensus 259 i~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~ 329 (369)
.+ -+=+.++...|.++++.+.+..+-.-..+...+++|++++.+-.+.++.|.++.++|+.+....+-..
T Consensus 86 ~~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a 155 (336)
T KOG2766|consen 86 FV-DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA 155 (336)
T ss_pred EE-eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence 43 44566677788899998888888888888889999999999999999999999999999987766543
No 117
>PRK02237 hypothetical protein; Provisional
Probab=80.97 E-value=10 Score=28.77 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=34.5
Q ss_pred hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 106 TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 106 ~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
-....+...+..+++-++|+++.+ ++|..+|++|+.++.+
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 455666677889999999999999 9999999999998864
No 118
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=77.92 E-value=44 Score=28.71 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhcccchhhH
Q 037942 71 ILFQIFLCSVTGATGNQVLYFVGLENSTPTIG 102 (369)
Q Consensus 71 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~ 102 (369)
.+...+..++.. .+.+...+.....+|+...
T Consensus 145 ~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 145 SWWKYILISVLA-MVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHccccCC
Confidence 344444444444 3333444444444665544
No 119
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.32 E-value=8.7 Score=29.00 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=39.7
Q ss_pred hcccchhhH-HhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 94 LENSTPTIG-CALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 94 l~~~~~~~~-~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
++-.+.+.+ +.--....+...+..+.+-|+|+++.+ ++|..+|++|+.++.+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 443333333 233556667788889999999999999 9999999999999875
No 120
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=77.22 E-value=46 Score=28.50 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=22.4
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 293 AIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 293 ~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
-.+|..++.+-.-+.+.+|..+.++=+......+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4457778888888888888887764433333333
No 121
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=76.74 E-value=8.9 Score=28.83 Aligned_cols=60 Identities=20% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhccCcceeeehhh-HHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 264 LAFCLIVWSIQRKGPLYVSVFSP-LLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
.+-.+|+..+++.+-+.+.++.+ +.-.++.+.+..+-.|......+.|..++++|+.+..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 34456677888888887777655 5677788888765555567788999999999998753
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=76.41 E-value=9.7 Score=28.56 Aligned_cols=47 Identities=13% Similarity=0.239 Sum_probs=39.9
Q ss_pred eeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCC
Q 037942 281 VSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 281 ~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~ 327 (369)
.+.+.-.-.+.+.++.+.+-+..|+...++|..+.++|+.++....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 45566677888899999999999999999999999999888877654
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.54 E-value=23 Score=26.72 Aligned_cols=32 Identities=9% Similarity=0.194 Sum_probs=22.8
Q ss_pred HHHHHHHHHhhhccccccccCCccceehhhhhhhhhhh
Q 037942 111 AITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMV 148 (369)
Q Consensus 111 i~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 148 (369)
.+-+.++++++||++++.. +.|.++.+.++..
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~f 105 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNY------LWAFLCILGAVYF 105 (108)
T ss_pred heeHHHHHHHhCCCccHHH------HHHHHHHHHhhhe
Confidence 3345677889999999997 7776666555543
No 124
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=68.86 E-value=1.6 Score=38.85 Aligned_cols=13 Identities=15% Similarity=0.445 Sum_probs=0.0
Q ss_pred ccchhHHHHHHHH
Q 037942 181 SNLILGSIAIIAS 193 (369)
Q Consensus 181 ~~~~~G~~~~l~a 193 (369)
+.-..|+++.+++
T Consensus 103 Q~LF~Gi~~l~l~ 115 (381)
T PF05297_consen 103 QTLFVGIVILFLC 115 (381)
T ss_dssp -------------
T ss_pred cHHHHHHHHHHHH
Confidence 4445676555444
No 125
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=67.01 E-value=28 Score=31.36 Aligned_cols=135 Identities=10% Similarity=0.043 Sum_probs=88.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHH-----h--hhcC---CCCC---CHHH
Q 037942 6 DLMPFLAMVTVQLGYAGMNFTSKLALD-SGMKPLVLVAYRQMFATLATIPFAYF-----I--EWKT---RPKI---TWPI 71 (369)
Q Consensus 6 ~~~g~~~~l~~~~~~g~~~~~~k~~~~-~g~~~~~~~~~r~~~~~l~l~~~~~~-----~--~~~~---~~~~---~~~~ 71 (369)
...|+.++.++.++-+...+.-....+ +|-++-+..|+..++....++...-= + ...+ .+.. -+..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 356777777777777777777755543 57889999999998888777653210 0 0000 0111 1122
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhcc----cchhhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhh
Q 037942 72 LFQIFLCSVTGATGNQVLYFVGLEN----STPTIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAM 147 (369)
Q Consensus 72 ~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 147 (369)
|.++ ++. ++.+.....+... +++-.+++...+--.+..+++.+.++.++++.. |+|..+.+.|..
T Consensus 242 ~~yL----l~n-~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~ 310 (330)
T KOG1583|consen 242 WVYL----LFN-VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTL 310 (330)
T ss_pred HHHH----HHH-HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHH
Confidence 2222 222 3444333333322 445556677788889999999999999999999 999999999999
Q ss_pred hhhh
Q 037942 148 VLSF 151 (369)
Q Consensus 148 l~~~ 151 (369)
+...
T Consensus 311 ~fa~ 314 (330)
T KOG1583|consen 311 LFAN 314 (330)
T ss_pred HHHH
Confidence 8873
No 126
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.32 E-value=8.3 Score=29.04 Aligned_cols=30 Identities=20% Similarity=0.104 Sum_probs=26.3
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHhhh
Q 037942 293 AIVSWALFQEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 293 ~l~~~~~~~e~~~~~~~~G~~li~~gv~l~ 322 (369)
..+++++++|++++....|.++++.+++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 567888999999999999999999987654
No 127
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.88 E-value=18 Score=26.79 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCccchhhhHHHHHHHHHHhhhe
Q 037942 292 VAIVSWALFQEKLFIGTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 292 ~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~ 323 (369)
-..++.+.++|++.+..+.|..+++.|+....
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 34568899999999999999999999988764
No 128
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=62.23 E-value=10 Score=30.19 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=10.0
Q ss_pred hhhHHHHHHHHHHhhhe
Q 037942 307 GTAIGSVLIVTGLYAVL 323 (369)
Q Consensus 307 ~~~~G~~li~~gv~l~~ 323 (369)
..++|..+.+.|++...
T Consensus 88 ~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34456666777765553
No 129
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=58.60 E-value=50 Score=32.30 Aligned_cols=25 Identities=4% Similarity=0.174 Sum_probs=19.9
Q ss_pred cchhhhHHHHHHHHHHhhheecCCC
Q 037942 304 LFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 304 ~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
++..|++.+.++++|++++.+.+++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~ 278 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKG 278 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6888999999999998877654433
No 130
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=57.27 E-value=26 Score=26.34 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=34.0
Q ss_pred hhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhh
Q 037942 106 TNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSF 151 (369)
Q Consensus 106 ~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 151 (369)
-....+...+..+++-+.++.+.+ ++|..+|++|+.++.+
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 455666777888888899999999 9999999999988875
No 131
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=55.57 E-value=73 Score=26.16 Aligned_cols=50 Identities=10% Similarity=0.356 Sum_probs=33.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhh-----CCCchHHHHHHHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQTKLSKK-----FPAPYTCTTLMCLISSIMCS 230 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~ 230 (369)
.+....+..++.++++|++..++.....++ .+.|..-..+..+.+.++.+
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSl 182 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSL 182 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHH
Confidence 556778888899999999988887665544 33445555555555555443
No 132
>PF15102 TMEM154: TMEM154 protein family
Probab=54.40 E-value=17 Score=29.19 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhhheecCCCCCCCC
Q 037942 310 IGSVLIVTGLYAVLWGKDKELKPD 333 (369)
Q Consensus 310 ~G~~li~~gv~l~~~~~~~~~~~~ 333 (369)
++.++++..++++.+.+||+.|+.
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~K~~ 90 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRTKQE 90 (146)
T ss_pred HHHHHHHHHHHheeEEeecccCCC
Confidence 344455556666666666655543
No 133
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=54.08 E-value=2.4e+02 Score=28.21 Aligned_cols=40 Identities=15% Similarity=0.104 Sum_probs=17.9
Q ss_pred ehhhHHHHHHHHHHHHHhcCccchh-hhHHHHHHHHHHhhh
Q 037942 283 VFSPLLLVIVAIVSWALFQEKLFIG-TAIGSVLIVTGLYAV 322 (369)
Q Consensus 283 ~~~~~~pv~~~l~~~~~~~e~~~~~-~~~G~~li~~gv~l~ 322 (369)
......|+-+.+.|.+.-.-..+.. .+.|.++++.+++..
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 3344456666666654433233322 333444444444433
No 134
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=47.30 E-value=2.1e+02 Score=26.38 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=44.1
Q ss_pred eehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHH-------HH-HHh
Q 037942 136 VFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVI-------IQ-TKL 207 (369)
Q Consensus 136 ~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v-------~~-~~~ 207 (369)
+.++.++..|+...... -+.. .......|..+..++.+.+....+ .. |+.
T Consensus 7 ~f~~~mGtg~l~~~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~ 64 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLLYL-LPYH---------------------FGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAF 64 (330)
T ss_dssp GGHHHHHHHHHHHHHHT-TTTT---------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHh---------------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 78899999998888731 1110 234556777777777777666222 22 233
Q ss_pred hhhCCCchHHHHHHHHHHHHHHHHHH
Q 037942 208 SKKFPAPYTCTTLMCLISSIMCSVIG 233 (369)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (369)
.++..||....++-....+...+...
T Consensus 65 ~~el~~p~~~~f~~t~~m~~~~l~~~ 90 (330)
T PF03595_consen 65 KAELRHPVRSSFFPTFPMALMLLAAF 90 (330)
T ss_dssp HHHHHSTTGGGGGGHHHHHHHHHHHH
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHH
Confidence 34444667766666655555544433
No 135
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=46.24 E-value=2.9e+02 Score=26.87 Aligned_cols=59 Identities=7% Similarity=-0.059 Sum_probs=37.7
Q ss_pred HHHHHhHHHHHHHHHHHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 257 SGIVCSALAFCLIVWSIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 257 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
.++++....|+.| .|+...|...-+.. -.--+..-++..++|.++.++.+.....+...
T Consensus 249 ssvv~~Y~~yL~~-SAlss~P~~~CNp~------------~~~~~~~~~~~~iig~i~~~~~v~yss~ra~~ 307 (429)
T PF03348_consen 249 SSVVSLYTTYLTW-SALSSEPDKECNPS------------GSRSGSWNTWQSIIGLIFTFVSVLYSSFRASS 307 (429)
T ss_pred HHHHHHHHHHHHH-HHHHcCCCcccCCc------------ccccCCcchHHHHHHHHHHHHHHHHhcccccc
Confidence 4555555666666 57777776666655 01123345678899999999998887765443
No 136
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=44.59 E-value=7.6 Score=34.71 Aligned_cols=24 Identities=17% Similarity=0.484 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhccCcceeeehhh
Q 037942 263 ALAFCLIVWSIQRKGPLYVSVFSP 286 (369)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~s~~~~ 286 (369)
++..++|.+.+++.+++.-+++..
T Consensus 119 aL~vW~Ym~lLr~~GAs~WtiLaF 142 (381)
T PF05297_consen 119 ALGVWFYMWLLRELGASFWTILAF 142 (381)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHH
Confidence 455666777778888876665543
No 137
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=43.55 E-value=20 Score=27.98 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=6.3
Q ss_pred HHHHHHHHHHhhhe
Q 037942 310 IGSVLIVTGLYAVL 323 (369)
Q Consensus 310 ~G~~li~~gv~l~~ 323 (369)
+|.+++++.+.+..
T Consensus 75 aGvIg~Illi~y~i 88 (122)
T PF01102_consen 75 AGVIGIILLISYCI 88 (122)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555554443333
No 138
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=40.02 E-value=20 Score=28.70 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=19.8
Q ss_pred HhccCcceeeehhhHHHHHHHHHHHHHh
Q 037942 273 IQRKGPLYVSVFSPLLLVIVAIVSWALF 300 (369)
Q Consensus 273 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~ 300 (369)
+..-+....+.+.|+.|+++++++.++.
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556677788888888888877653
No 139
>PF15471 TMEM171: Transmembrane protein family 171
Probab=38.31 E-value=42 Score=29.88 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=18.2
Q ss_pred hhhhHHHHHHHHHHhhheecCCC
Q 037942 306 IGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 306 ~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
..|+.|-.++++|.+.....+.|
T Consensus 161 slQImGPlIVl~GLCFFVVAHvK 183 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVK 183 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeee
Confidence 36899999999998888765544
No 140
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.52 E-value=35 Score=22.87 Aligned_cols=18 Identities=39% Similarity=0.706 Sum_probs=15.5
Q ss_pred ceehhhhhhhhhhhhhhh
Q 037942 135 KVFGTIICVGGAMVLSFY 152 (369)
Q Consensus 135 ~~~g~~l~~~Gv~l~~~~ 152 (369)
|.+|+++.+.|+.++.+.
T Consensus 1 kiigi~Llv~GivLl~~G 18 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFG 18 (59)
T ss_pred CeeeehHHHHHHHHHHhh
Confidence 488999999999999864
No 141
>PHA03049 IMV membrane protein; Provisional
Probab=36.61 E-value=37 Score=23.12 Aligned_cols=19 Identities=11% Similarity=0.055 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHhhheecCC
Q 037942 309 AIGSVLIVTGLYAVLWGKD 327 (369)
Q Consensus 309 ~~G~~li~~gv~l~~~~~~ 327 (369)
.++++.+++|.+++...++
T Consensus 7 l~iICVaIi~lIvYgiYnk 25 (68)
T PHA03049 7 LVIICVVIIGLIVYGIYNK 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4667777777776654443
No 142
>PF14851 FAM176: FAM176 family
Probab=36.33 E-value=59 Score=26.54 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=13.6
Q ss_pred HHHHHHhccCcceeeehhhHHHHHHHHH
Q 037942 268 LIVWSIQRKGPLYVSVFSPLLLVIVAIV 295 (369)
Q Consensus 268 ~~~~a~~~~~~~~~s~~~~~~pv~~~l~ 295 (369)
+-.|+.-+-.|-.++++.....-+++++
T Consensus 9 Laaya~I~~~PE~~aLYFv~gVC~GLlL 36 (153)
T PF14851_consen 9 LAAYAHIRDNPERFALYFVSGVCAGLLL 36 (153)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 3334444455555555555544444433
No 143
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=36.04 E-value=38 Score=23.17 Aligned_cols=21 Identities=19% Similarity=0.010 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHhhheecCCC
Q 037942 308 TAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 308 ~~~G~~li~~gv~l~~~~~~~ 328 (369)
-.++++++++|.+++....++
T Consensus 6 iLi~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 356777888887777544443
No 144
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.99 E-value=1.9e+02 Score=21.56 Aligned_cols=32 Identities=9% Similarity=0.251 Sum_probs=24.1
Q ss_pred HHHHHHHhhhccccccccCCccceehhhhhhhhhhhhh
Q 037942 113 TFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLS 150 (369)
Q Consensus 113 ~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 150 (369)
-+.++++.+||++++.. +.+..+...|+.++.
T Consensus 83 Fv~Fsvfyl~epl~~~~------l~a~~~i~gav~fiF 114 (116)
T COG3169 83 FVPFSVFYLKEPLRWNY------LWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHcCcchHHH------HHHHHHHHHHHHHhc
Confidence 34578889999999998 777776666666553
No 145
>PF14851 FAM176: FAM176 family
Probab=34.93 E-value=1.2e+02 Score=24.86 Aligned_cols=12 Identities=25% Similarity=0.221 Sum_probs=5.2
Q ss_pred HHHHHHHHHHhh
Q 037942 310 IGSVLIVTGLYA 321 (369)
Q Consensus 310 ~G~~li~~gv~l 321 (369)
+|.++.++.++.
T Consensus 32 ~GLlLtLcllV~ 43 (153)
T PF14851_consen 32 AGLLLTLCLLVI 43 (153)
T ss_pred HHHHHHHHHHHh
Confidence 344444444433
No 146
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=32.82 E-value=3.6e+02 Score=24.02 Aligned_cols=37 Identities=5% Similarity=-0.161 Sum_probs=18.9
Q ss_pred HHhccCcceeeehhhHHHHHHHHHHHHHhcCccchhh
Q 037942 272 SIQRKGPLYVSVFSPLLLVIVAIVSWALFQEKLFIGT 308 (369)
Q Consensus 272 a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~ 308 (369)
..++.++........++=.+-++-..+++.-.-....
T Consensus 115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~ 151 (249)
T PF10225_consen 115 CYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEF 151 (249)
T ss_pred hcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 3345666665555555555555444445544444333
No 147
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=30.22 E-value=2e+02 Score=23.18 Aligned_cols=31 Identities=6% Similarity=0.284 Sum_probs=26.1
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037942 180 KSNLILGSIAIIASSISWAAWVIIQTKLSKK 210 (369)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 210 (369)
+.......+..++++..|.-|...+||..+.
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 3556788899999999999999999998654
No 148
>PF15345 TMEM51: Transmembrane protein 51
Probab=30.09 E-value=26 Score=30.49 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHhhheecCCCCCCC
Q 037942 309 AIGSVLIVTGLYAVLWGKDKELKP 332 (369)
Q Consensus 309 ~~G~~li~~gv~l~~~~~~~~~~~ 332 (369)
..|.++.++.+|+..+.|+|++..
T Consensus 66 G~Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 66 GSGVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358888889999888777665433
No 149
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=29.07 E-value=7.1e+02 Score=26.33 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=27.3
Q ss_pred hhHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhh
Q 037942 100 TIGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVL 149 (369)
Q Consensus 100 ~~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 149 (369)
+.+.++..+.|+-.+.++.+...+|.+... +.+.+-.++|.+-+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHHh
Confidence 456778888999888888887666543332 44444444554433
No 150
>PRK14397 membrane protein; Provisional
Probab=28.42 E-value=54 Score=28.58 Aligned_cols=10 Identities=10% Similarity=0.079 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 037942 186 GSIAIIASSI 195 (369)
Q Consensus 186 G~~~~l~a~~ 195 (369)
|--.+++..+
T Consensus 49 G~~~gilv~~ 58 (222)
T PRK14397 49 GTKWGVLTLV 58 (222)
T ss_pred chHHHHHHHH
Confidence 3333333333
No 151
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=28.40 E-value=3.6e+02 Score=22.73 Aligned_cols=34 Identities=12% Similarity=0.261 Sum_probs=23.2
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHhhheecC
Q 037942 293 AIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGK 326 (369)
Q Consensus 293 ~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~ 326 (369)
-.+|..++.|-.-+.+.+|..+.++=+......+
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~ 165 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTH 165 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4457778888888889898888765444443333
No 152
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.96 E-value=1.2e+02 Score=23.11 Aligned_cols=11 Identities=27% Similarity=0.691 Sum_probs=5.8
Q ss_pred HHHHHHHHHHH
Q 037942 289 LVIVAIVSWAL 299 (369)
Q Consensus 289 pv~~~l~~~~~ 299 (369)
.++++.++|++
T Consensus 56 ilVGa~iG~ll 66 (116)
T COG5336 56 ILVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHHH
Confidence 34555566554
No 153
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=26.92 E-value=62 Score=19.79 Aligned_cols=19 Identities=32% Similarity=0.840 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhhheecCCC
Q 037942 310 IGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 310 ~G~~li~~gv~l~~~~~~~ 328 (369)
+|.++++++.+++.|.+++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4556666666666555443
No 154
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=26.77 E-value=33 Score=27.20 Aligned_cols=20 Identities=20% Similarity=0.190 Sum_probs=12.6
Q ss_pred eeeehhhHHHHHHHHHHHHH
Q 037942 280 YVSVFSPLLLVIVAIVSWAL 299 (369)
Q Consensus 280 ~~s~~~~~~pv~~~l~~~~~ 299 (369)
..+.+.|+-|++.++++.++
T Consensus 69 ~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 69 KAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45556667777777776543
No 155
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=26.34 E-value=5.9e+02 Score=24.51 Aligned_cols=286 Identities=13% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHHHH-----HHhcccchhhHHhhhhh
Q 037942 34 GMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVLYF-----VGLENSTPTIGCALTNI 108 (369)
Q Consensus 34 g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~al~~~~~~~~~~l~~~ 108 (369)
+.+.....+++..+++....+..-- --+|-++..-.....+..+++.....+..+. .-+...+-+-..++...
T Consensus 89 ~~~~~~~~~fq~~Fa~~t~~I~sGa--vaeR~~~~~~~v~~~~~~~~vY~~~ahwvW~~~GwL~~lG~~DfAG~~vVH~~ 166 (403)
T TIGR00836 89 TLPDLLFFLFQMMFAAIAATIISGA--VAERMKFSAYLLFSVLWTTLVYPPVAHWVWGGGGWLYKLGVLDFAGGGVVHIV 166 (403)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH--HhhcccHHHHHHHHHHHHHHHHHhccceeecCCchhhccCcchhcCceeEecc
Q ss_pred hHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhh-----cCccccCCCCCcchhhhhcccccccCCCccc
Q 037942 109 LPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFY-----HGKTFGIPNSSIHWKYAEKMSEENSGNKSNL 183 (369)
Q Consensus 109 ~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
.-......++++-+++-... .+.+.+--...++++|..++-+. .+.... .+...
T Consensus 167 gG~~~L~~a~~LGpR~~r~~-~~~~~~~~n~~~~~lGt~lLw~gW~gFN~Gs~~~--------------------~~~~~ 225 (403)
T TIGR00836 167 GGVAGLAAALVLGPRIGRFP-RPVAIRPHNVPLVVLGTFILWFGWFGFNAGSALA--------------------ANGTA 225 (403)
T ss_pred hhHHHHHHHHHhcCCCCCCc-CcCCCCCCCHHHHHHHHHHHHHHHhcccchhhcc--------------------cchHH
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHhH
Q 037942 184 ILGSIAIIASSISWAAWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLIVERKRAAWKLNATIRLVSALYSGIVCSA 263 (369)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 263 (369)
....+--.+|+.+-++...+..+..++..+ .....--.+.+.+...+..-..++ +..+.+|+++..
T Consensus 226 ~~a~~nT~lA~a~g~l~~~~~~~~~~gk~~-~~~~~nG~LAGLVaita~a~~v~p-------------~~A~viG~iag~ 291 (403)
T TIGR00836 226 AYAAVNTNLAAAAGGLTWLLIDWLKHGKPT-LLGACNGILAGLVAITPGCGVVTP-------------WGAIIIGLVAGV 291 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-HHHHHhhhhhhheeecCCCCCCCH-------------HHHHHHHHHHHH
Q ss_pred HHHHHHH---HHHhccCcceeeehhhHHHHHHHHHHHHHhcC---------------ccchhhhHHHHHHHHHHhhheec
Q 037942 264 LAFCLIV---WSIQRKGPLYVSVFSPLLLVIVAIVSWALFQE---------------KLFIGTAIGSVLIVTGLYAVLWG 325 (369)
Q Consensus 264 ~~~~~~~---~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e---------------~~~~~~~~G~~li~~gv~l~~~~ 325 (369)
++++... .-++.-++..+-.+-...=+++.+..-++-.+ ..-..|++|.+.+++=.....+.
T Consensus 292 ~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~~~~s~~~~~i 371 (403)
T TIGR00836 292 LCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAIIAWAFVVTFI 371 (403)
T ss_pred HHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred CCCCCCCCCCCCCcccccccccCCCccccce
Q 037942 326 KDKELKPDNVIVEPELTKDAESGDIGQQQLF 356 (369)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (369)
--+--|+-...+.+++++...-+..+...+.
T Consensus 372 i~~il~~~~~lRv~~e~E~~GlD~~~hg~~a 402 (403)
T TIGR00836 372 ILKILDKTIGLRVSEEEEKIGLDLAEHGEFA 402 (403)
T ss_pred HHHHHHhcccccCCHHHHHhCCChhhhCccc
No 156
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=24.38 E-value=6.4e+02 Score=24.23 Aligned_cols=42 Identities=7% Similarity=0.136 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCCCC
Q 037942 287 LLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDKEL 330 (369)
Q Consensus 287 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~~~ 330 (369)
.-+.++.++..+.+. -.....++..+.+.++.+..+.+++++
T Consensus 388 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (435)
T PRK10435 388 ICSVLGCVFCFIALM--GASSFELAGTFIVSLIILMFYARKMHE 429 (435)
T ss_pred HHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444555555544443 223445555566666555555554443
No 157
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=23.85 E-value=25 Score=27.37 Aligned_cols=17 Identities=35% Similarity=0.675 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhHHHHHH
Q 037942 252 VSALYSGIVCSALAFCL 268 (369)
Q Consensus 252 ~~l~~~gi~~~~~~~~~ 268 (369)
..+++.|+..+.++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 34445566666666644
No 158
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=23.71 E-value=6.6e+02 Score=25.23 Aligned_cols=22 Identities=5% Similarity=0.010 Sum_probs=9.4
Q ss_pred cCccchhhhHHHHHHHHHHhhh
Q 037942 301 QEKLFIGTAIGSVLIVTGLYAV 322 (369)
Q Consensus 301 ~e~~~~~~~~G~~li~~gv~l~ 322 (369)
++.+++.-++....++..++.+
T Consensus 485 ~~~MNya~VV~gg~~lf~li~~ 506 (550)
T KOG1289|consen 485 ADNMNYACVVYGGVMLFCLIYY 506 (550)
T ss_pred cccCceEEEeehhhhhhhhhee
Confidence 3445554444443444443333
No 159
>PF13127 DUF3955: Protein of unknown function (DUF3955)
Probab=23.59 E-value=2.4e+02 Score=19.10 Aligned_cols=32 Identities=6% Similarity=0.112 Sum_probs=23.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037942 4 LDDLMPFLAMVTVQLGYAGMNFTSKLALDSGM 35 (369)
Q Consensus 4 ~~~~~g~~~~l~~~~~~g~~~~~~k~~~~~g~ 35 (369)
++-..+..+++++..++-.......+..++|+
T Consensus 2 ~~~~l~~~~~llg~~~l~i~~~~~syVd~~G~ 33 (63)
T PF13127_consen 2 KKYILSLILLLLGVVCLFIFNIIGSYVDEDGV 33 (63)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccceECCCCe
Confidence 34567788888888888888888666655554
No 160
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=22.96 E-value=5.6e+02 Score=23.07 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHHHhh--hcCCCCCCHHHHHHHHHHHHhhhHHHHHHH
Q 037942 15 TVQLGYAGMNFTSKLALDSG--MKPLVLVAYRQMFATLATIPFAYFIE--WKTRPKITWPILFQIFLCSVTGATGNQVLY 90 (369)
Q Consensus 15 ~~~~~~g~~~~~~k~~~~~g--~~~~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (369)
...+++++.+.+... .+.| +.|.....+-.+....+...+...++ |+.+..+-..+.+.++.-+++. ..-.+.|
T Consensus 101 ~ll~lyAlinAl~~l-~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS-~al~VaF 178 (314)
T COG3965 101 ALLCLYALINALGSL-LDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLS-AALFVAF 178 (314)
T ss_pred HHHHHHHHHHHHHHH-hcCCccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHH-HHHHHHH
Confidence 334556666666554 3322 55666666655555555544444433 2222222222333333333333 3333444
Q ss_pred HHHhcccchhhHHhhhhhhHHHHHHHHHHhhhccc
Q 037942 91 FVGLENSTPTIGCALTNILPAITFVLAVIFRQEYV 125 (369)
Q Consensus 91 ~~al~~~~~~~~~~l~~~~pi~~~ll~~l~~~e~~ 125 (369)
..|.....-..+-...+.-|.+.++...++.+-++
T Consensus 179 ~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~IplPl 213 (314)
T COG3965 179 AAAWLLAGTKFAHLVVYADPMVLALVCLVFIPLPL 213 (314)
T ss_pred HHHHHhccCchhhhhcccCHHHHHHHHHheeeccH
Confidence 44544445555666778899999998888754443
No 161
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=22.48 E-value=4.5e+02 Score=22.38 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=18.1
Q ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHh
Q 037942 31 LDSGMKPLVLVAYRQMFATLATIPFAYFI 59 (369)
Q Consensus 31 ~~~g~~~~~~~~~r~~~~~l~l~~~~~~~ 59 (369)
.+. +...++..+--.++.++++.+.+..
T Consensus 51 a~F-la~~qIiVYvGAI~VLflFvIMll~ 78 (198)
T PRK06638 51 AEF-LGVVQIIVYVGAVMVLFLFVVMMLD 78 (198)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344 5566777777777777777766653
No 162
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=22.42 E-value=1.5e+02 Score=20.91 Aligned_cols=42 Identities=12% Similarity=0.015 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHhhheecCCC
Q 037942 287 LLLVIVAIVSWALFQEKLFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 287 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
+.-+++.+.|++.=+-..+...+.+..++.+-+++=.|.-.+
T Consensus 19 ~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 19 ISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 334455555543333333333333333333333333555443
No 163
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=22.35 E-value=4.9e+02 Score=22.10 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhhhHHHHHH
Q 037942 10 FLAMVTVQLGYAGMNFTSKLALDSGMKPLVLVAYRQMFATLATIPFAYFIEWKTRPKITWPILFQIFLCSVTGATGNQVL 89 (369)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (369)
.++.=+.+++-|.+..+.+.+.. ..-..+...-...++.....+.+. .|...-+-.+..++..+...... .+-+.+
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~~--~GlItlll~a~vgGfamy~my~y~-yr~~ad~sqr~~~~K~~lv~~~s-m~lWi~ 177 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQV--YGLITLLLTAVVGGFAMYIMYYYA-YRMRADNSQRPGTWKYLLVAVLS-MLLWIA 177 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc--hhHHHHHHHHHhhhHHHHHHHHHH-HHhhcccccCCchHHHHHHHHHH-HHHHHH
Confidence 34444455666777777776433 333333333333333333333222 22111111112222333333333 445555
Q ss_pred HHHHhcccchhhHHhhhhhhHHHHHHHH------HHhhhcccccc
Q 037942 90 YFVGLENSTPTIGCALTNILPAITFVLA------VIFRQEYVAIK 128 (369)
Q Consensus 90 ~~~al~~~~~~~~~~l~~~~pi~~~ll~------~l~~~e~~~~~ 128 (369)
.+.+-..+|++..-.+ -|+...+++ .+.+|+|.+.+
T Consensus 178 v~i~t~~lPtslN~~L---~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 178 VMIATVFLPTSLNPQL---PPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred HHHHHhhCCCcCCcCC---chHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5677777777665433 333333333 23345666554
No 164
>PRK11010 ampG muropeptide transporter; Validated
Probab=22.25 E-value=7.5e+02 Score=24.23 Aligned_cols=18 Identities=22% Similarity=0.119 Sum_probs=9.8
Q ss_pred hhhHHHHHHHHHHhhhee
Q 037942 307 GTAIGSVLIVTGLYAVLW 324 (369)
Q Consensus 307 ~~~~G~~li~~gv~l~~~ 324 (369)
...+..++.+.|+++...
T Consensus 384 ~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 384 FYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555666666555543
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=22.17 E-value=7.3e+02 Score=24.10 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHhhhe
Q 037942 309 AIGSVLIVTGLYAVL 323 (369)
Q Consensus 309 ~~G~~li~~gv~l~~ 323 (369)
+.|.++++.+++...
T Consensus 417 ~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 417 LMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHHHh
Confidence 445555555544443
No 166
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=22.02 E-value=1.7e+02 Score=19.13 Aligned_cols=44 Identities=20% Similarity=0.290 Sum_probs=32.3
Q ss_pred eehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037942 136 VFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNKSNLILGSIAIIASSISWAAWVIIQTKLSKK 210 (369)
Q Consensus 136 ~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 210 (369)
.+|.++.+.|++++..+. .|.+..+++....+......|+..+.
T Consensus 6 v~G~~lv~~Gii~~~lPG-------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPLPG-------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hHHHHHHHHHHHhhcCCC-------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 678888889988887532 36677777777888877777776543
No 167
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=21.49 E-value=4.8e+02 Score=21.74 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=16.0
Q ss_pred HHHHHHHHhhhhCCCchHHHHHHHHHHHHHHHHHHHH
Q 037942 199 AWVIIQTKLSKKFPAPYTCTTLMCLISSIMCSVIGLI 235 (369)
Q Consensus 199 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (369)
......|+..++ .+-.....+......+..+...+.
T Consensus 116 ~~~~~~~~~~~R-~~~i~ag~~v~l~~~~~~l~~~l~ 151 (194)
T PF07698_consen 116 VAIFSVRRIRSR-SDIIKAGLLVGLVNALMILALGLI 151 (194)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445565555 232334444444444444444443
No 168
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=21.46 E-value=4.7e+02 Score=22.25 Aligned_cols=18 Identities=6% Similarity=0.211 Sum_probs=10.4
Q ss_pred ccchhHHHHHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWA 198 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a 198 (369)
.....|..+.+++.+.+.
T Consensus 42 Ka~TLGv~LILlgv~l~~ 59 (197)
T PRK12585 42 ISNTFGVSLLLFATVGYF 59 (197)
T ss_pred cchhhhHHHHHHHHHHHH
Confidence 444566666666655544
No 169
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=21.45 E-value=5.3e+02 Score=23.08 Aligned_cols=19 Identities=11% Similarity=0.044 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 037942 185 LGSIAIIASSISWAAWVII 203 (369)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~ 203 (369)
......+++++..++.+++
T Consensus 140 ~~~~~lf~~G~ia~~AMIl 158 (257)
T PF04018_consen 140 PSYLYLFLAGAIAACAMIL 158 (257)
T ss_pred chHHHHHHHHHHHHHHHhc
Confidence 3444556666666666655
No 170
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=21.28 E-value=6.5e+02 Score=23.13 Aligned_cols=15 Identities=20% Similarity=0.197 Sum_probs=8.4
Q ss_pred eehhhhhhhhhhhhh
Q 037942 136 VFGTIICVGGAMVLS 150 (369)
Q Consensus 136 ~~g~~l~~~Gv~l~~ 150 (369)
+.|+++...++.-..
T Consensus 52 ~~G~lvl~m~~la~~ 66 (308)
T PF06166_consen 52 VVGILVLVMALLAGF 66 (308)
T ss_pred HHHHHHHHHHHHHHc
Confidence 566666655555443
No 171
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=20.98 E-value=9.1e+02 Score=24.72 Aligned_cols=19 Identities=0% Similarity=0.050 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037942 186 GSIAIIASSISWAAWVIIQ 204 (369)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~ 204 (369)
.+.+.++++++.+.-....
T Consensus 408 ~i~~~~l~g~giG~~~~~~ 426 (599)
T PF06609_consen 408 AIAFLVLAGFGIGGILVPA 426 (599)
T ss_pred HHHHHHHHHHhHHHHHHHH
Confidence 3455556666655544444
No 172
>PRK10666 ammonium transporter; Provisional
Probab=20.96 E-value=7.8e+02 Score=23.95 Aligned_cols=22 Identities=5% Similarity=-0.097 Sum_probs=13.3
Q ss_pred HHHHHHhhhHHHHHHHHHHhcc
Q 037942 75 IFLCSVTGATGNQVLYFVGLEN 96 (369)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~al~~ 96 (369)
+..+|.+..-..+..|+-+...
T Consensus 222 ~~~lGt~lLw~GW~gFN~Gs~~ 243 (428)
T PRK10666 222 MVFTGTAILYIGWFGFNAGSAG 243 (428)
T ss_pred HHHHHHHHHHHHHHhccchhhc
Confidence 3455655556677677766654
No 173
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=20.88 E-value=1.4e+02 Score=16.93 Aligned_cols=16 Identities=19% Similarity=0.140 Sum_probs=8.5
Q ss_pred chhhhHHHHHHHHHHh
Q 037942 305 FIGTAIGSVLIVTGLY 320 (369)
Q Consensus 305 ~~~~~~G~~li~~gv~ 320 (369)
.+..++|.+++..+.+
T Consensus 11 ~~~~~~G~~l~~~~~~ 26 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGL 26 (34)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4556667744444333
No 174
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.34 E-value=3.7e+02 Score=19.91 Aligned_cols=59 Identities=12% Similarity=-0.008 Sum_probs=33.8
Q ss_pred HHHHhccCcceeeehhhHHHHHHHHHHHHH---hcCc-cchhhhHHHHHHHHHHhhheecCCC
Q 037942 270 VWSIQRKGPLYVSVFSPLLLVIVAIVSWAL---FQEK-LFIGTAIGSVLIVTGLYAVLWGKDK 328 (369)
Q Consensus 270 ~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~---~~e~-~~~~~~~G~~li~~gv~l~~~~~~~ 328 (369)
..++++++...--.+-.++.+++++++.+. .++. +-...|.|...-+.+.-+.....+|
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r 84 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNR 84 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhh
Confidence 556777665555555556666666665442 3332 2233577887777777666544443
No 175
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=20.18 E-value=2.2e+02 Score=24.08 Aligned_cols=73 Identities=15% Similarity=0.139 Sum_probs=42.1
Q ss_pred hHHhhhhhhHHHHHHHHHHhhhccccccccCCccceehhhhhhhhhhhhhhhcCccccCCCCCcchhhhhcccccccCCC
Q 037942 101 IGCALTNILPAITFVLAVIFRQEYVAIKTKPGQAKVFGTIICVGGAMVLSFYHGKTFGIPNSSIHWKYAEKMSEENSGNK 180 (369)
Q Consensus 101 ~~~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
..+++....--...+.-.+..||+++.- ..|.+...++..+.... |+ ..
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~a-------~~gl~gV~i~a~~A~~t-G~-----------------------A~ 76 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQPA-------LSGLFGVAISAAIAWRT-GS-----------------------AK 76 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHH-------HHHHHHHHHHHHHHHHH-CC-----------------------hh
Confidence 3445555555555566677777777643 55555555555444432 22 23
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHH
Q 037942 181 SNLILGSIAIIASSISWAAWVIIQ 204 (369)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~ 204 (369)
+....|+..-...+..+.++.+..
T Consensus 77 ~~Fl~gi~~n~~~~~~~l~S~lvr 100 (187)
T PF11361_consen 77 DFFLPGIWTNAVYAVVFLVSVLVR 100 (187)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHc
Confidence 566777777777666666665553
Done!