BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037946
(371 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 176/302 (58%), Gaps = 25/302 (8%)
Query: 53 FQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAA 112
++L DN ++N++G+G G VYK + +G L+AVK+L K +R + F
Sbjct: 30 LRELQVASDN----FSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQFQT 84
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX----DWETRYKI 168
E++++ HRN+++L G+C + +LL+Y Y++ DW R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A+GSA+GLAYLH C P I+HRDVK NILLD ++EA + DFGLAKLM+ + H + V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 203
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSA---VQPQIGDGLHI 285
G+ G+IAP Y T +EK+DV+ YGV+LLE+++G+ A + D + +
Sbjct: 204 RGTIGHIAPE-------YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 286 VEWVKKKMGSFEPAVSILDTKLQG-LPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
++WVK + + +++D LQG D+ V++++Q +A+ C SSP ERP M EVV
Sbjct: 257 LDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQ---VALLCTQSSPMERPKMSEVVR 312
Query: 345 LL 346
+L
Sbjct: 313 ML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 25/302 (8%)
Query: 53 FQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAA 112
++L DN ++N++G+G G VYK + +G L+AVK+L K +R + F
Sbjct: 22 LRELQVASDN----FXNKNILGRGGFGKVYKGRLADGXLVAVKRL-KEERTQGGELQFQT 76
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX----DWETRYKI 168
E++++ HRN+++L G+C + +LL+Y Y++ DW R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A+GSA+GLAYLH C P I+HRDVK NILLD ++EA + DFGLAKLM+ + H + V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 195
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSA---VQPQIGDGLHI 285
G G+IAP Y T +EK+DV+ YGV+LLE+++G+ A + D + +
Sbjct: 196 RGXIGHIAPE-------YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 286 VEWVKKKMGSFEPAVSILDTKLQG-LPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
++WVK + + +++D LQG D+ V++++Q +A+ C SSP ERP M EVV
Sbjct: 249 LDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQ---VALLCTQSSPMERPKMSEVVR 304
Query: 345 LL 346
+L
Sbjct: 305 ML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 29/305 (9%)
Query: 50 FIPFQKLNFTIDNILECLKDEN---VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEP 106
+PF+ + ++ E + + +IG G G VYK + +G +A+K+ +T +
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQG 78
Query: 107 VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXX----XXXXXXXXDW 162
++ F EI+ L RH ++V L+G+C ++ +L+Y Y+ W
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E R +I +G+A+GL YLH AI+HRDVK NILLD + + DFG++K +
Sbjct: 139 EQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSA-VQPQIGD 281
H V G+ GYI P Y +TEKSDVYS+GVVL E+L RSA VQ +
Sbjct: 196 HLXXVVKGTLGYIDPE-------YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 282 GLHIVEWV--KKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLG-IAMFCVNSSPAERPT 338
+++ EW G E V L D++ E L+ G A+ C+ S +RP+
Sbjct: 249 MVNLAEWAVESHNNGQLEQIVD------PNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 339 MKEVV 343
M +V+
Sbjct: 303 MGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 151/305 (49%), Gaps = 29/305 (9%)
Query: 50 FIPFQKLNFTIDNILECLKDEN---VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEP 106
+PF+ + ++ E + + +IG G G VYK + +G +A+K+ +T +
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQG 78
Query: 107 VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXX----XXXXXXXXDW 162
++ F EI+ L RH ++V L+G+C ++ +L+Y Y+ W
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E R +I +G+A+GL YLH AI+HRDVK NILLD + + DFG++K
Sbjct: 139 EQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSA-VQPQIGD 281
H V G+ GYI P Y +TEKSDVYS+GVVL E+L RSA VQ +
Sbjct: 196 HLXXVVKGTLGYIDPE-------YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 282 GLHIVEWV--KKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLG-IAMFCVNSSPAERPT 338
+++ EW G E V L D++ E L+ G A+ C+ S +RP+
Sbjct: 249 MVNLAEWAVESHNNGQLEQIVD------PNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 339 MKEVV 343
M +V+
Sbjct: 303 MGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 146/291 (50%), Gaps = 29/291 (9%)
Query: 71 NVIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKL 128
N +G+G GVVYK + N +AVKKL EE F EI+++ +H N+V+L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 129 LGYCSNKSVKLLLYNYI---SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
LG+ S+ L+Y Y+ S W R KIA G+A G+ +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRD+K NILLD + A ++DFGLA+ SR+ G+ Y+AP + +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-- 210
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAV----QPQIGDGLHIVEWVKKKMGSFEPAVS 301
IT KSD+YS+GVVLLEI++G AV +PQ+ +++ ++ +
Sbjct: 211 ------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-----LLDIKEEIEDEEKTIED 259
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+D K+ V+ M +A C++ +RP +K+V LL E+ ++
Sbjct: 260 YIDKKMNDADSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 29/291 (9%)
Query: 71 NVIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKL 128
N +G+G GVVYK + N +AVKKL EE F EI+++ +H N+V+L
Sbjct: 31 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 129 LGYCSNKSVKLLLYNYI---SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
LG+ S+ L+Y Y+ S W R KIA G+A G+ +LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 146
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRD+K NILLD + A ++DFGLA+ R+ G+ Y+AP + +
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-- 204
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAV----QPQIGDGLHIVEWVKKKMGSFEPAVS 301
IT KSD+YS+GVVLLEI++G AV +PQ+ +++ ++ +
Sbjct: 205 ------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-----LLDIKEEIEDEEKTIED 253
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+D K+ V+ M +A C++ +RP +K+V LL E+ ++
Sbjct: 254 YIDKKMNDADSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 29/291 (9%)
Query: 71 NVIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKL 128
N +G+G GVVYK + N +AVKKL EE F EI+++ +H N+V+L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 129 LGYCSNKSVKLLLYNYI---SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
LG+ S+ L+Y Y+ S W R KIA G+A G+ +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRD+K NILLD + A ++DFGLA+ R+ G+ Y+AP + +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-- 210
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAV----QPQIGDGLHIVEWVKKKMGSFEPAVS 301
IT KSD+YS+GVVLLEI++G AV +PQ+ +++ ++ +
Sbjct: 211 ------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-----LLDIKEEIEDEEKTIED 259
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+D K+ V+ M +A C++ +RP +K+V LL E+ ++
Sbjct: 260 YIDKKMNDADSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 139/291 (47%), Gaps = 29/291 (9%)
Query: 71 NVIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKL 128
N G+G GVVYK + N +AVKKL EE F EI++ +H N+V+L
Sbjct: 28 NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 129 LGYCSNKSVKLLLYNYI---SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
LG+ S+ L+Y Y S W R KIA G+A G+ +LH +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN--- 143
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRD+K NILLD + A ++DFGLA+ SR+ G+ Y AP + +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-- 201
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAV----QPQIGDGLHIVEWVKKKMGSFEPAVS 301
IT KSD+YS+GVVLLEI++G AV +PQ+ +++ ++ +
Sbjct: 202 ------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-----LLDIKEEIEDEEKTIED 250
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+D K V+ +A C++ +RP +K+V LL E ++
Sbjct: 251 YIDKKXNDADSTSVE---AXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 50/291 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 20 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +A+G+ Y
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHAS--------------ETKFEMKKLIDIARQTARGMDY 123
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 124 LH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+E V + GS P
Sbjct: 181 VIRMQDSNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGR--GSLSP 233
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+S + + P +M + M + C+ ERP+ ++A + E+
Sbjct: 234 DLSKVRSN---CPKRMKRLMAE-------CLKKKRDERPSFPRILAEIEEL 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 50/291 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +A+G+ Y
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHAS--------------ETKFEMKKLIDIARQTARGMDY 135
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + H +++GS ++AP
Sbjct: 136 LH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+E V + GS P
Sbjct: 193 VIRMQDSNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGR--GSLSP 245
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+S + + P +M + M + C+ ERP+ ++A + E+
Sbjct: 246 DLSKVRSN---CPKRMKRLMAE-------CLKKKRDERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 50/291 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +A+G+ Y
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHAS--------------ETKFEMKKLIDIARQTARGMDY 135
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + H +++GS ++AP
Sbjct: 136 LH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+E V + GS P
Sbjct: 193 VIRMQDSNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGR--GSLSP 245
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+S + + P +M + M + C+ ERP+ ++A + E+
Sbjct: 246 DLSKVRSN---CPKRMKRLMAE-------CLKKKRDERPSFPRILAEIEEL 286
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 34/285 (11%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G V++AE +G +AVK L + E V+ F E+ I+ +RH NIV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 133 SNKSVKLLLYNYISXXXXXX---XXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
+ ++ Y+S D R +A A+G+ YLH+ P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVH 162
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
R++K N+L+D KY + DFGL++L ST + AG+ ++AP +++
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAST--FLSSKSAAGTPEWMAP-----EVLRDEP 215
Query: 250 MNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQG 309
N EKSDVYS+GV+L E+ + +++ G+ PA + +
Sbjct: 216 SN--EKSDVYSFGVILWELAT------------------LQQPWGNLNPAQVVAAVGFKC 255
Query: 310 LPDQMVQEM-LQTLGIAMFCVNSSPAERPTMKEVVALLME-VKSA 352
++ + + Q I C + P +RP+ ++ LL +KSA
Sbjct: 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G V++AE +G +AVK L + E V+ F E+ I+ +RH NIV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 133 SNKSVKLLLYNYISXXXXXX---XXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
+ ++ Y+S D R +A A+G+ YLH+ P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVH 162
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+K N+L+D KY + DFGL++L S + AG+ ++AP +++
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAP-----EVLRDEP 215
Query: 250 MNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQG 309
N EKSDVYS+GV+L E+ + +++ G+ PA + +
Sbjct: 216 SN--EKSDVYSFGVILWELAT------------------LQQPWGNLNPAQVVAAVGFKC 255
Query: 310 LPDQMVQEM-LQTLGIAMFCVNSSPAERPTMKEVVALLME-VKSA 352
++ + + Q I C + P +RP+ ++ LL +KSA
Sbjct: 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 18 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 121
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 122 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 179 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 231
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 232 DLSKVRS---NCPKAMKRLMAE-------CLKKKRDERPLFPQILA 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 119
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 177 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 229
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 230 DLSKVRSN---CPKAMKRLMAE-------CLKKKRDERPLFPQILA 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 124
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 125 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 182 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 234
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 235 DLSKVRSN---CPKAMKRLMAE-------CLKKKRDERPLFPQILA 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 124
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 125 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 182 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 234
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 235 DLSKVRSN---CPKAMKRLMAE-------CLKKKRDERPLFPQILA 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 43 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 146
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 147 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 204 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 256
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 257 DLSKVRS---NCPKAMKRLMAE-------CLKKKRDERPLFPQILA 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 147
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 205 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 257
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 258 DLSKVRSN---CPKAMKRLMAE-------CLKKKRDERPLFPQILA 293
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 119
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + + H +++GS ++AP
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 177 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 229
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 230 DLSKVRSN---CPKAMKRLMAE-------CLKKKRDERPLFPQILA 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 119
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + H +++GS ++AP
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 177 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 229
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 230 DLSKVRS---NCPKAMKRLMAE-------CLKKKRDERPLFPQILA 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 36 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 139
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + H +++GS ++AP
Sbjct: 140 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 197 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 249
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 250 DLSKVRS---NCPKAMKRLMAE-------CLKKKRDERPLFPQILA 285
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 50/286 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G VYK + +G+ +AVK L T + + +F E+ +L RH NI+ +GY
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 133 SNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYK------IAVGSAQGLAY 178
+ + ++ LY+++ ET+++ IA +AQG+ Y
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHII--------------ETKFEMIKLIDIARQTAQGMDY 147
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH +I+HRD+K NNI L + DFGLA + + H +++GS ++AP
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++Q Y+ +SDVY++G+VL E+++G+ I + I+ V + G P
Sbjct: 205 VIRMQDKNPYSF----QSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGR--GYLSP 257
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
+S + + P M + M + C+ ERP +++A
Sbjct: 258 DLSKVRS---NCPKAMKRLMAE-------CLKKKRDERPLFPQILA 293
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 47/285 (16%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
E V+G+G GVV KA+ + +A+K++ E +F E++ L + H NIVKL
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 130 GYCSNKSVKLL-------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
G C N ++ LYN + W + +QG+AYLH
Sbjct: 69 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 122
Query: 183 CVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
A++HRD+K N+LL + + DFG A + M+ GS ++AP
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP---- 173
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++ G N +EK DV+S+G++L E+++ R +IG + W G+ P +
Sbjct: 174 -EVFEG--SNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHN-GTRPPLIK 228
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
L ++ L + C + P++RP+M+E+V ++
Sbjct: 229 NLPKPIESLMTR--------------CWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 47/285 (16%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
E V+G+G GVV KA+ + +A+K++ E +F E++ L + H NIVKL
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 130 GYCSNKSVKLL-------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
G C N ++ LYN + W + +QG+AYLH
Sbjct: 68 GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 121
Query: 183 CVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
A++HRD+K N+LL + + DFG A + M+ GS ++AP
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP---- 172
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++ G N +EK DV+S+G++L E+++ R +IG + W G+ P +
Sbjct: 173 -EVFEG--SNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHN-GTRPPLIK 227
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
L ++ L + C + P++RP+M+E+V ++
Sbjct: 228 NLPKPIESLMTR--------------CWSKDPSQRPSMEEIVKIM 258
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 49/248 (19%)
Query: 38 PPGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKL 97
P G D SY W + + T IG G G VYK + +G+ +AVK L
Sbjct: 21 PRGQRDSSYYWEIEASEVMLST------------RIGSGSFGTVYKGKW-HGD-VAVKIL 66
Query: 98 WKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLL--------LYNYISXXX 149
E +F E+ +L RH NI+ +GY + ++ ++ LY ++
Sbjct: 67 KVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ- 125
Query: 150 XXXXXXXXXXXDWETRYK------IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKY 203
ET+++ IA +AQG+ YLH I+HRD+K NNI L
Sbjct: 126 -------------ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGL 169
Query: 204 EAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGV 263
+ DFGLA + + + + + GS ++AP ++Q ++ +SDVYSYG+
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF----QSDVYSYGI 225
Query: 264 VLLEILSG 271
VL E+++G
Sbjct: 226 VLYELMTG 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 72 VIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
V+GKGC G K GE++ +K+L + DEE +F E++++ + H N++K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 131 YCSNKSVKLLLYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
+ YI W R A A G+AYLH I+H
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR------------VAGSYGYIAP 237
RD+ +N L+ +ADFGLA+LM R V G+ ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQ 278
++I G + + EK DV+S+G+VL EI+ GR P
Sbjct: 192 -----EMINGRSYD--EKVDVFSFGIVLCEII-GRVNADPD 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEE---PVDSFAAEIQILGHIRHRNIV 126
E +IG G G VY+A G+ +AVK + DE+ +++ E ++ ++H NI+
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAA-RHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L G C K L L + + AV A+G+ YLH + +
Sbjct: 70 ALRGVCL-KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 187 ILHRDVKCNNILLDSKYEA--------YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
I+HRD+K +NIL+ K E + DFGLA+ + T A AG+Y ++AP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA----AGAYAWMAPE 184
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ + ++ SDV+SYGV+L E+L+G
Sbjct: 185 VIRASM-------FSKGSDVWSYGVLLWELLTG 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG+G GVVYKA+ GE A+KK+ K DE + EI IL ++H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDV 192
K +L++ ++ + T + G+AY H V LHRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRDL 126
Query: 193 KCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
K N+L++ + E +ADFGLA+ Y H + + Y AP Y T+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKYSTTI 182
Query: 251 NITEKSDVYSYGVVLLEILSG 271
D++S G + E+++G
Sbjct: 183 ------DIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG+G GVVYKA+ GE A+KK+ K DE + EI IL ++H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDV 192
K +L++ ++ + T + G+AY H V LHRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRDL 126
Query: 193 KCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
K N+L++ + E +ADFGLA+ Y H + + Y AP Y T+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYSTTI 182
Query: 251 NITEKSDVYSYGVVLLEILSG 271
D++S G + E+++G
Sbjct: 183 ------DIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG+G GVVYKA+ GE A+KK+ K DE + EI IL ++H NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDV 192
K +L++ ++ + T + G+AY H +LHRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDL 126
Query: 193 KCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
K N+L++ + E +ADFGLA+ Y H + + Y AP Y T+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYSTTI 182
Query: 251 NITEKSDVYSYGVVLLEILSG 271
D++S G + E+++G
Sbjct: 183 ------DIWSVGCIFAEMVNG 197
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 26/232 (11%)
Query: 51 IPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEP--- 106
P +L DN +E E IGKG G+V+K + + ++A+K L + E
Sbjct: 8 FPKSRLPTLADNEIEY---EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 107 --VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET 164
F E+ I+ ++ H NIVKL G N ++++ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-RMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 165 RYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYE-----AYLADFGLAKLMNST 219
+ ++ + A G+ Y+ + P I+HRD++ NI L S E A +ADFGL S
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQ 177
Query: 220 NYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
H++S + G++ ++AP + I + TEK+D YS+ ++L IL+G
Sbjct: 178 QSVHSVSGLLGNFQWMAP-----ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A N + I A+K L+K + ++ V+ E++I H+R
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA---GSYGYIAPG 238
++HRD+K N+LL S E +ADFG + H SR A G+ Y+ P
Sbjct: 127 K---KVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++I G + EK D++S GV+ E L G+ + + K++ E
Sbjct: 176 ----EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQDTY------KRISRVE- 222
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+ D +G D ++ +L+ +P++RP ++EV+
Sbjct: 223 -FTFPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 51 IPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEP--- 106
P +L DN +E E IGKG G+V+K + + ++A+K L + E
Sbjct: 8 FPKSRLPTLADNEIEY---EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 107 --VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET 164
F E+ I+ ++ H NIVKL G N ++++ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-RMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 165 RYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYE-----AYLADFGLAKLMNST 219
+ ++ + A G+ Y+ + P I+HRD++ NI L S E A +ADFG S
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQ 177
Query: 220 NYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
H++S + G++ ++AP + I + TEK+D YS+ ++L IL+G
Sbjct: 178 QSVHSVSGLLGNFQWMAP-----ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYISXXXX 150
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 71 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 151 XXXXXXXXXXDW--------ETRYKIAVGS--AQGLAYL-HHDCVPAILHRDVKCNNILL 199
D E R + S AQG+A+L +C+ HRDV N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLL 185
Query: 200 DSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI-----T 253
+ + A + DFGLA+ +MN +N YI G +L + + +I T
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVKWMAPESIFDCVYT 232
Query: 254 EKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQ 313
+SDV+SYG++L EI S P I + VK +PA + P
Sbjct: 233 VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA---------PKN 283
Query: 314 MVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+ I C P RPT +++ + L E
Sbjct: 284 I-------YSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 51 IPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEP--- 106
P +L DN +E E IGKG G+V+K + + ++A+K L + E
Sbjct: 8 FPKSRLPTLADNEIEY---EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 107 --VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET 164
F E+ I+ ++ H NIVKL G N ++++ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-RMVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 165 RYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYE-----AYLADFGLAKLMNST 219
+ ++ + A G+ Y+ + P I+HRD++ NI L S E A +ADF L S
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQ 177
Query: 220 NYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
H++S + G++ ++AP + I + TEK+D YS+ ++L IL+G
Sbjct: 178 QSVHSVSGLLGNFQWMAP-----ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYISXXXX 150
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 79 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 151 XXXXXXXXXXDW--------ETRYKIAVGS--AQGLAYL-HHDCVPAILHRDVKCNNILL 199
D E R + S AQG+A+L +C+ HRDV N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLL 193
Query: 200 DSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI-----T 253
+ + A + DFGLA+ +MN +N YI G +L + + +I T
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVKWMAPESIFDCVYT 240
Query: 254 EKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQ 313
+SDV+SYG++L EI S P I + VK +PA + P
Sbjct: 241 VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA---------PKN 291
Query: 314 MVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+ I C P RPT +++ + L E
Sbjct: 292 I-------YSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 132
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCGTLDYLPP-----EMIEGRMH 183
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 184 D--EKVDLWSLGVLCYEFLVGKPPFE------ANTYQETYKRISRVE--FTFPDFVTEGA 233
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 234 RD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 132
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 183
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 184 D--EKVDLWSLGVLCYEFLVGKPPFE------ANTYQETYKRISRVE--FTFPDFVTEGA 233
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 234 RD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + + G+ Y+ P
Sbjct: 127 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCGTLDYLPP---- 175
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 176 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 224
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 225 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+KT+ ++ V+ E++I H+RH NI++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV---IHR 136
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 187
Query: 251 NITEKSDVYSYGVVLLEILSG 271
+ EK D++S GV+ E L G
Sbjct: 188 D--EKVDLWSLGVLCYEFLVG 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHR 133
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + ++G+ Y+ P ++I G
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSCHAPSSR----RTTLSGTLDYLPP-----EMIEGRMH 184
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 185 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 234
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 235 RD-LISRLLK----------HNPSQRPMLREVL 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + + G+ Y+ P
Sbjct: 126 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP---- 174
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 175 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 223
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 224 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 186
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 187 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 236
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 237 RD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + + G+ Y+ P
Sbjct: 131 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP---- 179
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 180 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 228
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 229 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 132
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPP-----EMIEGRMH 183
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 184 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 233
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 234 RD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA---GSYGYIAPG 238
V +HRD+K N+LL S E +ADFG + H SR A G+ Y+ P
Sbjct: 127 KRV---IHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
++I G + EK D++S GV+ E L G+ + + + K++ E
Sbjct: 176 ----EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE- 222
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+ D +G D ++ +L+ +P++RP ++EV+
Sbjct: 223 -FTFPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 61/318 (19%)
Query: 62 NILECLKDENVIGKGCSGVVYKAEMPN------GELIAVKKLWKTKRDEEPVDSFAAEIQ 115
N +E ++D IG+G G V++A P ++AVK L + + D F E
Sbjct: 47 NNIEYVRD---IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAA 102
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS--------XXXXXXXXXXXXXXDWETRYK 167
++ + NIVKLLG C+ LL+ Y++ D TR +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 168 ----------------IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFG 211
IA A G+AYL +HRD+ N L+ +ADFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 212 LAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
L++ + S +Y+ A A ++ P I Y T +SDV++YGVVL EI S
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPES----IFYN---RYTTESDVWAYGVVLWEIFS- 271
Query: 272 RSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNS 331
+QP G M E + D + P+ E+ + + C +
Sbjct: 272 -YGLQPYYG------------MAHEEVIYYVRDGNILACPENCPLELYNLMRL---CWSK 315
Query: 332 SPAERPTMKEVVALLMEV 349
PA+RP+ + +L +
Sbjct: 316 LPADRPSFCSIHRILQRM 333
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 132
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPP-----EMIEGRMH 183
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 184 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 233
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 234 RD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 137
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 188
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 189 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 238
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 239 RD-LISRLLK----------HNPSQRPMLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 186
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 187 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 236
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 237 RD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 158
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 159 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 209
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 210 D--EKVDLWSLGVLCYEFLVGKPPFE------ANTYQETYKRISRVE--FTFPDFVTEGA 259
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 260 RD-LISRLLK----------HNPSQRPMLREVL 281
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 133
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPP-----EMIEGRMH 184
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 185 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 234
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 235 RD-LISRLLK----------HNPSQRPMLREVL 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 137
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 188
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 189 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 238
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 239 RD-LISRLLK----------HNPSQRPMLREVL 260
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 118/279 (42%), Gaps = 56/279 (20%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI----- 145
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 79 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 146 -------SXXXXXXXXXXXXXXDWETRYKIAVGS--AQGLAYL-HHDCVPAILHRDVKCN 195
S TR + S AQG+A+L +C+ HRDV
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI----HRDVAAR 193
Query: 196 NILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI-- 252
N+LL + + A + DFGLA+ +MN +N YI G +L + + +I
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVKWMAPESIFD 240
Query: 253 ---TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQG 309
T +SDV+SYG++L EI S P I + VK +PA +
Sbjct: 241 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA-------- 292
Query: 310 LPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
P + I C P RPT +++ + L E
Sbjct: 293 -PKNI-------YSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 41/276 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA---GSYGYIAPGKCKLQIIYG 247
D+K N+LL S E +ADFG + H SR A G+ Y+ P ++I G
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPP-----EMIEG 183
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
+ EK D++S GV+ E L G+ + + + K++ E + D
Sbjct: 184 RMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVT 233
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+G D ++ +L+ +P++RP ++EV+
Sbjct: 234 EGARD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 118/279 (42%), Gaps = 56/279 (20%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI----- 145
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 79 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 146 -------SXXXXXXXXXXXXXXDWETRYKIAVGS--AQGLAYL-HHDCVPAILHRDVKCN 195
S TR + S AQG+A+L +C+ HRDV
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI----HRDVAAR 193
Query: 196 NILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI-- 252
N+LL + + A + DFGLA+ +MN +N YI G +L + + +I
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVKWMAPESIFD 240
Query: 253 ---TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQG 309
T +SDV+SYG++L EI S P I + VK +PA +
Sbjct: 241 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA-------- 292
Query: 310 LPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
P + I C P RPT +++ + L E
Sbjct: 293 -PKNI-------YSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+KT+ ++ V+ E++I H+RH NI++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV---IHR 136
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + G+ Y+ P ++I G
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSR----RDTLCGTLDYLPP-----EMIEGRMH 187
Query: 251 NITEKSDVYSYGVVLLEILSG 271
+ EK D++S GV+ E L G
Sbjct: 188 D--EKVDLWSLGVLCYEFLVG 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 137
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPP-----EMIEGRMH 188
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 189 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 238
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 239 RD-LISRLLK----------HNPSQRPMLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + + G+ Y+ P
Sbjct: 124 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP---- 172
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 173 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 221
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 222 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 252
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 149
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P ++I G
Sbjct: 150 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 200
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 201 D--EKVDLWSLGVLCYEFLVGKPPFE------ANTYQETYKRISRVE--FTFPDFVTEGA 250
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 251 RD-LISRLLK----------HNPSQRPMLREVL 272
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 41/276 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 158
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR---VAGSYGYIAPGKCKLQIIYG 247
D+K N+LL S E +ADFG + H SR + G+ Y+ P ++I G
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPP-----EMIEG 206
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
+ EK D++S GV+ E L G+ + + + K++ E + D
Sbjct: 207 RMHD--EKVDLWSLGVLCYEFLVGKPPFE------ANTYQETYKRISRVE--FTFPDFVT 256
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+G D ++ +L+ +P++RP ++EV+
Sbjct: 257 EGARD-LISRLLK----------HNPSQRPMLREVL 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 133
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + G+ Y+ P ++I G
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RDTLCGTLDYLPP-----EMIEGRMH 184
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 185 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 234
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 235 RD-LISRLLK----------HNPSQRPMLREVL 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + G+ Y+ P
Sbjct: 130 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPP---- 178
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 179 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 227
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 228 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 35/282 (12%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIR 121
LE + +GKG G VY A + I A+K L+K + ++ V+ E++I H+R
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NI++L GY + + L+ Y D + A L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
V +HRD+K N+LL S E +ADFG + S+ + G+ Y+ P
Sbjct: 127 KRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPP---- 175
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
++I G + EK D++S GV+ E L G+ + + + K++ E +
Sbjct: 176 -EMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FT 224
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D +G D ++ +L+ +P++RP ++EV+
Sbjct: 225 FPDFVTEGARD-LISRLLK----------HNPSQRPMLREVL 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 134
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + G+ Y+ P ++I G
Sbjct: 135 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPP-----EMIEGRMH 185
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 186 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 235
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 236 RD-LISRLLK----------HNPSQRPMLREVL 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 137
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + + G+ Y+ P + I G
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP-----EXIEGRXH 188
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 189 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 238
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 239 RD-LISRLLK----------HNPSQRPXLREVL 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + G+ Y+ P ++I G
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPP-----EMIEGRMH 186
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 187 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 236
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 237 RD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV---IHR 137
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +ADFG + S+ + G+ Y+ P ++I G
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLXGTLDYLPP-----EMIEGRMH 188
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 189 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 238
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 239 RD-LISRLLK----------HNPSQRPMLREVL 260
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 116/281 (41%), Gaps = 58/281 (20%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYISXXXX 150
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 79 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 151 XXXXXXXXXXDWETRYK----------------IAVGSAQGLAYL-HHDCVPAILHRDVK 193
E Y + AQG+A+L +C+ HRDV
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI----HRDVA 193
Query: 194 CNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI 252
N+LL + + A + DFGLA+ +MN +N YI G +L + + +I
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVKWMAPESI 240
Query: 253 -----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
T +SDV+SYG++L EI S P I + VK +PA +
Sbjct: 241 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA------ 294
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
P + I C P RPT +++ + L E
Sbjct: 295 ---PKNI-------YSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 55 KLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVD-SFAA 112
K FTID+ + ++ +GKG G VY A E N ++A+K L+K++ ++E V+
Sbjct: 8 KRKFTIDD-FDIVRP---LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EI+I H+RH NI+++ Y ++ L+ + D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A L Y H ++HRD+K N+L+ K E +ADFG + S + G+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCGTL 176
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
Y+ P ++I G T + EK D++ GV+ E L G
Sbjct: 177 DYLPP-----EMIEGKTHD--EKVDLWCAGVLCYEFLVG 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 71 NVIGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDE--EPVDSFA-AEIQILGHIRHRNIV 126
+ +G+G VYKA N +++A+KK+ R E + ++ A EI++L + H NI+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
LL +KS L+++++ + + QGL YLH
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--- 132
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTN---YHHAMSRVAGSYGYIAPGKCKLQ 243
ILHRD+K NN+LLD LADFGLAK S N H ++R Y AP +
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR-----WYRAP-----E 182
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEIL 269
+++G M D+++ G +L E+L
Sbjct: 183 LLFGARM-YGVGVDMWAVGCILAELL 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 55 KLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVD-SFAA 112
K FTID+ +GKG G VY A E N ++A+K L+K++ ++E V+
Sbjct: 8 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EI+I H+RH NI+++ Y ++ L+ + D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A L Y H ++HRD+K N+L+ K E +ADFG + S + G+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCGTL 176
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
Y+ P ++I G T + EK D++ GV+ E L G
Sbjct: 177 DYLPP-----EMIEGKTHD--EKVDLWCAGVLCYEFLVG 208
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 34/310 (10%)
Query: 63 ILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-- 120
++EC +GKG G V++ + +GE +AVK + RDE+ S+ E +I +
Sbjct: 12 LVEC------VGKGRYGEVWRG-LWHGESVAVKIF--SSRDEQ---SWFRETEIYNTVLL 59
Query: 121 RHRNIVKLLG---YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
RH NI+ + N S +L L + + ++AV +A GLA
Sbjct: 60 RHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLA 119
Query: 178 YLHHDCV-----PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHH---AMSRVA 229
+LH + PAI HRD K N+L+ S + +AD GLA +M+S + +
Sbjct: 120 HLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRV 178
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
G+ Y+AP QI + +D++++G+VL EI + R+ V + D V
Sbjct: 179 GTKRYMAPEVLDEQIRTD-CFESYKWTDIWAFGLVLWEI-ARRTIVNGIVEDYRPPFYDV 236
Query: 290 KKKMGSFEP--AVSILDTKLQGLPDQMVQEMLQTLGIAMF---CVNSSPAERPTMKEVVA 344
SFE V +D + +P+++ + + + G+A C +P+ R T +
Sbjct: 237 VPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLS-GLAQMMRECWYPNPSARLTALRIKK 295
Query: 345 LLMEVKSAPE 354
L ++ ++PE
Sbjct: 296 TLQKISNSPE 305
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 55 KLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVD-SFAA 112
K FTID+ +GKG G VY A E N ++A+K L+K++ ++E V+
Sbjct: 9 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EI+I H+RH NI+++ Y ++ L+ + D +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A L Y H ++HRD+K N+L+ K E +ADFG + S + G+
Sbjct: 125 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCGTL 177
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
Y+ P ++I G T + EK D++ GV+ E L G
Sbjct: 178 DYLPP-----EMIEGKTHD--EKVDLWCAGVLCYEFLVG 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H ++HR
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHR 134
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +A+FG + S+ + + G+ Y+ P ++I G
Sbjct: 135 DIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 185
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 186 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 235
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 236 RD-LISRLLK----------HNPSQRPMLREVL 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 35/273 (12%)
Query: 73 IGKGCSGVVYKAEMPNGELI-AVKKLWKTKRDEEPVD-SFAAEIQILGHIRHRNIVKLLG 130
+GKG G VY A + I A+K L+K + ++ V+ E++I H+RH NI++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + L+ Y D + A L+Y H V +HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K N+LL S E +A+FG + S+ + + G+ Y+ P ++I G
Sbjct: 136 DIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDYLPP-----EMIEGRMH 186
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGL 310
+ EK D++S GV+ E L G+ + + + K++ E + D +G
Sbjct: 187 D--EKVDLWSLGVLCYEFLVGKPPFEA------NTYQETYKRISRVE--FTFPDFVTEGA 236
Query: 311 PDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
D ++ +L+ +P++RP ++EV+
Sbjct: 237 RD-LISRLLK----------HNPSQRPMLREVL 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G +G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQI 116
N ++E + +G+G GVVYKA+ G ++A+K++ DE + EI +
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQG 175
L + H NIV L+ ++ L++ ++ +++ KI + +G
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ-DSQIKIYLYQLLRG 131
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYG 233
+A+ H ILHRD+K N+L++S LADFGLA+ +Y H + +
Sbjct: 132 VAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLW 184
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
Y AP ++ G + + D++S G + E+++G+
Sbjct: 185 YRAP-----DVLMG-SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQI 116
N ++E + +G+G GVVYKA+ G ++A+K++ DE + EI +
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQG 175
L + H NIV L+ ++ L++ ++ +++ KI + +G
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ-DSQIKIYLYQLLRG 131
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYG 233
+A+ H ILHRD+K N+L++S LADFGLA+ +Y H + +
Sbjct: 132 VAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLW 184
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
Y AP ++ G + + D++S G + E+++G+
Sbjct: 185 YRAP-----DVLMG-SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 77
Query: 128 L--LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG-------- 175
L Y S + ++ N + D+ ET Y++A ++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLV--------------LDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 176 -----------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK +
Sbjct: 124 VKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEP 178
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 179 NVSXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 111
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 112 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 160 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 216
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 217 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 52 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 105
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 106 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 153
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 154 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 210
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 211 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 62 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 115
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 116 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 163
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 164 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 220
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 221 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 60 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 113
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 114 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 161
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 162 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 218
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 219 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 103 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 156
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 157 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 205 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 261
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 262 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 111
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 112 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 160 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 214
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 215 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 57/319 (17%)
Query: 56 LNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGE-----LIAVKKLWKTKRDEEPVDSF 110
L FT + C+ + VIG G G VYK + +A+K L +++ VD F
Sbjct: 35 LKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-F 93
Query: 111 AAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAV 170
E I+G H NI++L G S +++ Y+ D E V
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLV 150
Query: 171 GSAQGLAY-LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS---TNYHHAMS 226
G +G+A + + +HRD+ NIL++S ++DFGL++++ Y +
Sbjct: 151 GMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS---------GRSAVQP 277
++ + AP + T SDV+S+G+V+ E+++ V
Sbjct: 211 KIP--IRWTAPEAISYR-------KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 261
Query: 278 QIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERP 337
I DG L T + P + Q M+Q C A RP
Sbjct: 262 AINDGFR------------------LPTPMD-CPSAIYQLMMQ-------CWQQERARRP 295
Query: 338 TMKEVVALLMEVKSAPEEL 356
++V++L ++ AP+ L
Sbjct: 296 KFADIVSILDKLIRAPDSL 314
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 29 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 82
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 83 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 131 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 187
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 188 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 128
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 184
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 185 --EPVDVWSCGIVLTAMLAG 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 37 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 90
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 91 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 138
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAK--LMNSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 139 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 195
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 196 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRD 130
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 186
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 187 --EPVDVWSCGIVLTAMLAG 204
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 36 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 89
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 90 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 138 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 192
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 193 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 43 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 96
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 97 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 144
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 145 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 199
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 200 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 9/221 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
E DV+S G+VL +L+G +W +KK
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKK 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 78 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 126 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 183 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 36 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 89
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 90 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 138 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 192
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 193 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 32 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 85
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 86 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 133
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 134 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 188
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 189 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G G V A E K+ KR + ++ EI I + H N+VK G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+++ L Y S + G+ YLH I HRD
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+LLD + ++DFGLA + N ++++ G+ Y+AP K + +
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA---- 185
Query: 252 ITEKSDVYSYGVVLLEILSG 271
E DV+S G+VL +L+G
Sbjct: 186 --EPVDVWSCGIVLTAMLAG 203
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 25 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 78
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 79 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 126
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 127 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 181
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 182 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 78 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 126 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 180
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 181 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 134
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H+ M + + AP K
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK--- 191
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 192 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 239
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 240 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 277
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 78 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 126 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 180
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 181 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 140
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H+ M + + AP K
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK--- 197
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 198 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 245
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 246 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 283
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H+ M + + AP K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK--- 187
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 188 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 235
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 236 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 53/227 (23%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + KR + E+QI+ + H NIV+
Sbjct: 28 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVR 81
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 82 ------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 129
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAM 225
LAY+H I HRD+K N+LLD L DFG AK + +
Sbjct: 130 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNV 184
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
S + Y Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 185 SXICSRY-YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG- 130
V +G G V+KA++ N E +AVK ++ + + + + E+ L ++H NI++ +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGA 86
Query: 131 --YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC----- 183
++ V L L W IA A+GLAYLH D
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 184 --VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K N+LL + A +ADFGLA + G+ Y+AP
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE--V 204
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILS 270
L+ + + + D+Y+ G+VL E+ S
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 134
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H+ M + + AP K
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK--- 191
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 192 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 239
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 240 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 277
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H+ M + + AP K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK--- 187
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 188 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 235
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 236 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+GC G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 209 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 265 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 313
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 314 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 359
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+GC G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 152 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 208 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 256
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 257 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 302
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+GC G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 150 TYQLARGMEYLASQKCI----HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 206 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 254
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 255 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 300
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 30/287 (10%)
Query: 73 IGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G GVV+K + G+++A+KK +++ D EI++L ++H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH-HDCVPAILHR 190
K L++ Y I + Q + + H H+C+ HR
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI----HR 126
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
DVK NIL+ L DFG A+L+ + ++ VA + Y +P +++ G T
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYD-DEVATRW-YRSP-----ELLVGDT- 178
Query: 251 NITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ-- 308
DV++ G V E+LSG + P D + + ++K +G P + + Q
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG-VPLWPGKSD-VDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 309 ---GLPDQMVQEMLQ---------TLGIAMFCVNSSPAERPTMKEVV 343
+PD E L+ LG+ C++ P ER T ++++
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+GC G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 155 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 211 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 259
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 260 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 305
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 52 PFQKLNFTIDNILEC--LKDENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVD 108
P +K N + I + L+ V+G G G V+K +P GE I + K D+
Sbjct: 16 PSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ 75
Query: 109 SFAA---EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR 165
SF A + +G + H +IV+LLG C S++L+ +
Sbjct: 76 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 135
Query: 166 YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
V A+G+ YL ++HR++ N+LL S + +ADFG+A L+ +
Sbjct: 136 LNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
S ++A L+ I + T +SDV+SYGV + E+++
Sbjct: 193 SEAKTPIKWMA-----LESI--HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 65/288 (22%)
Query: 92 IAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNY------ 144
+AVK L T +E ++ +E++I+ H+ +H NIV LLG C++ L++ Y
Sbjct: 64 VAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 145 ---------------ISXXXXXXXXXXXXXXDWETRYKIAVGS--AQGLAYL-HHDCVPA 186
++ E R + S AQG+A+L +C+
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-- 180
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
HRDV N+LL + + A + DFGLA+ +MN +N YI G +L +
Sbjct: 181 --HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPVK 225
Query: 246 YGYTMNI-----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+ +I T +SDV+SYG++L EI S P I + VK +PA
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 285
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+ + + ++Q C P RPT +++ + L E
Sbjct: 286 A----------PKNIYSIMQA------CWALEPTHRPTFQQICSFLQE 317
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 71 NVIGKGCSGVVY--KAEMPNGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNIVK 127
+ +G G G V K E+ G +AVK L + K R + V EIQ L RH +I+K
Sbjct: 22 DTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
L S S ++ Y+S D + ++ G+ Y H V
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV--- 137
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ A +ADFGL+ +M+ + + GS Y AP ++I G
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAAP-----EVISG 189
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ + D++S GV+L +L G
Sbjct: 190 -RLYAGPEVDIWSSGVILYALLCG 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKL-WKTKRDEEPVDSFAAEIQ 115
F D+ + D IG G G VY A ++ N E++A+KK+ + K+ E E++
Sbjct: 47 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
L +RH N ++ G + L+ Y + G+ QG
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 176 LAYLH-HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
LAYLH H+ ++HRDVK NILL L DFG A +M N G+ +
Sbjct: 167 LAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYW 216
Query: 235 IAPGKCKLQIIYGYTMNITE-KSDVYSYGVVLLEI 268
+AP ++I + K DV+S G+ +E+
Sbjct: 217 MAP-----EVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 140
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H M + + AP K
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK--- 197
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 198 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 245
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 246 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 283
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 38/287 (13%)
Query: 73 IGKGCSGVVYKAE--MPNGELIAVK-KLWKTKRDEEP--VDSFAAEIQILGHIRHRNIVK 127
+G G GVV + E P+G+ ++V K K +P +D F E+ + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 128 LLGYCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
L G +K++ L S +RY + V A+G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYIAPGKCKLQI 244
+HRD+ N+LL ++ + DFGL + + + H M + + AP K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK--- 187
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMGSFEPAVSIL 303
T + SD + +GV L E+ + +P IG +G I+ + K+ G P
Sbjct: 188 ----TRTFSHASDTWMFGVTLWEMFT--YGQEPWIGLNGSQILHKIDKE-GERLP----- 235
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ + P + M+Q C P +RPT + L+E +
Sbjct: 236 --RPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEAQ 273
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 57/299 (19%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGS--- 172
V LLG C+ L+ L Y+ D+ T + S
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A+G+ +L +HRD+ NILL K + DFGLA+ +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR------------DIYKDP 198
Query: 233 GYIAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
Y+ G +L + + I ++ SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVKIDE 254
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 255 EFXRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKL-WKTKRDEEPVDSFAAEIQ 115
F D+ + D IG G G VY A ++ N E++A+KK+ + K+ E E++
Sbjct: 8 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
L +RH N ++ G + L+ Y + G+ QG
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 176 LAYLH-HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
LAYLH H+ ++HRDVK NILL L DFG A +M N G+ +
Sbjct: 128 LAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYW 177
Query: 235 IAPGKCKLQIIYGYTMNITE-KSDVYSYGVVLLEI 268
+AP ++I + K DV+S G+ +E+
Sbjct: 178 MAP-----EVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 67 LKDENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAA---EIQILGHIRH 122
L+ V+G G G V+K +P GE I + K D+ SF A + +G + H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 123 RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+IV+LLG C S++L+ + V A+G+ YL
Sbjct: 75 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
++HR++ N+LL S + +ADFG+A L+ + S ++A L
Sbjct: 135 ---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-----L 186
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ I + T +SDV+SYGV + E+++
Sbjct: 187 ESI--HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 69 DENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D V+GKG G+VY ++ N IA+K++ +RD EI + H++H+NIV+
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCV 184
LG S + + + I + Q GL YLH +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 141
Query: 185 PAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I+HRD+K +N+L+++ Y L +DFG +K + N G+ Y+AP
Sbjct: 142 -QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAP----- 192
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+II + +D++S G ++E+ +G+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 69 DENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D V+GKG G+VY ++ N IA+K++ +RD EI + H++H+NIV+
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCV 184
LG S + + + I + Q GL YLH +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 127
Query: 185 PAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I+HRD+K +N+L+++ Y L +DFG +K + N G+ Y+AP
Sbjct: 128 -QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAP----- 178
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+II + +D++S G ++E+ +G+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 42/294 (14%)
Query: 70 ENVIGKGCSGVVYKAE----MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+ VIGKG GVVY E N A+K L + ++ V++F E ++ + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ-VEAFLREGLLMRGLNHPNV 84
Query: 126 VKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHD 182
+ L+G + + +L Y+ + + I+ G A+G+ YL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAEQ 143
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH----HAMSRVAGSYGYIAPG 238
+HRD+ N +LD + +ADFGLA+ + Y+ H +R+ + +
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE-- 198
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
LQ T T KSDV+S+GV+L E+L+ R A + D + ++ + +P
Sbjct: 199 --SLQ-----TYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQP 250
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD + Q M Q C + PA RPT + +V + ++ SA
Sbjct: 251 EYC---------PDSLYQVMQQ-------CWEADPAVRPTFRVLVGEVEQIVSA 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 205
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 206 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 247
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 248 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 292
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 42/312 (13%)
Query: 34 MSTLPPGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELI 92
MS+ PP F Q++ T + +D +G G G V A + G +
Sbjct: 1 MSSPPPARSGFYR-------QEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKV 53
Query: 93 AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG-YCSNKSVKLLLYNYISXXXXX 151
A+KKL++ + E E+++L H+RH N++ LL + ++++ Y+
Sbjct: 54 AIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG 113
Query: 152 XXXXXXXXXD--WETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLA 208
+ E R + V +GL Y+H I+HRD+K N+ ++ E +
Sbjct: 114 TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKIL 170
Query: 209 DFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
DFGLA+ +S ++R Y AP ++I + M T+ D++S G ++ E+
Sbjct: 171 DFGLARQADSEMXGXVVTR-----WYRAP-----EVILNW-MRYTQTVDIWSVGCIMAEM 219
Query: 269 LSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA--VSILDTK-----LQGLPDQMVQEMLQT 321
++G++ + D L ++ + K G+ PA V L + ++GLP+ L+
Sbjct: 220 ITGKTLFKG--SDHLDQLKEIMKVTGT-PPAEFVQRLQSDEAKNYMKGLPE------LEK 270
Query: 322 LGIAMFCVNSSP 333
A N+SP
Sbjct: 271 KDFASILTNASP 282
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 202
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 203 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 251
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 252 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 289
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 73 IGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR---HRNIVKL 128
IG G G VYKA P+ G +A+K + +E S E+ +L + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 129 LGYC----SNKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIAVGSAQGLAYLHHD 182
+ C +++ +K+ L++ ++ ET + +GL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
C I+HRD+K NIL+ S LADFGLA++ +Y A++ V + Y AP + L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAP-EVLL 184
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEIL 269
Q Y + D++S G + E+
Sbjct: 185 QSTYATPV------DMWSVGCIFAEMF 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 229
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 230 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 278
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 279 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 316
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 210
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 211 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 252
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 253 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 297
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 208
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 209 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 250
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 251 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 210
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 211 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 259
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 260 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 207
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 208 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 249
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 250 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 294
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 57/299 (19%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGS--- 172
V LLG C+ L+ L Y+ D+ T + S
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A+G+ +L +HRD+ NILL K + DFGLA+ +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR------------DIYKDP 198
Query: 233 GYIAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
Y+ G +L + + I ++ SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVKIDE 254
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 255 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 228
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 229 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 277
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 278 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 315
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y+ ++ LQ
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ- 209
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 210 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 251
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 252 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 296
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K EE + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRD-EEPVDSFAAEIQILGHIRHRNIVKLLG 130
+G G VY AE + +A+K ++ R+ EE + F E+ + H+NIV ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
L+ YI +T G+ + H I+HR
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MRIVHR 135
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K NIL+DS + DFG+AK ++ T+ + V G+ Y +P + K +
Sbjct: 136 DIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHVLGTVQYFSPEQAKGEA------ 188
Query: 251 NITEKSDVYSYGVVLLEILSGR 272
E +D+YS G+VL E+L G
Sbjct: 189 -TDECTDIYSIGIVLYEMLVGE 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 72 VIGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
++G+G G+V K + G ++A+KK ++ D+ EI++L +RH N+V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
C K L++ ++ D++ K G+ + H I+HR
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHR 148
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K NIL+ L DFG A+ + + + Y AP + YG +
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 251 NITEKSDVYSYGVVLLEILSG 271
DV++ G ++ E+ G
Sbjct: 207 ------DVWAIGCLVTEMFMG 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++S K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 62
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++S K + QGLA+ H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 123 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 174
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 175 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++S K + QGLA+ H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 122 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 173
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 174 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++S K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 73 IGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR---HRNIVKL 128
IG G G VYKA P+ G +A+K + +E S E+ +L + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 129 LGYC----SNKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIAVGSAQGLAYLHHD 182
+ C +++ +K+ L++ ++ ET + +GL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
C I+HRD+K NIL+ S LADFGLA++ +Y A+ V + Y AP + L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAP-EVLL 184
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEIL 269
Q Y + D++S G + E+
Sbjct: 185 QSTYATPV------DMWSVGCIFAEMF 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 31/218 (14%)
Query: 71 NVIGKGCSGVVYKAEMPNGELIAVK-------KLWKTKRDEEPVDSFAAEIQILGHIRHR 123
+ +G G V+KA++ N + +AVK + W+++R EI ++H
Sbjct: 21 EIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSER----------EIFSTPGMKHE 69
Query: 124 NIVKLLG---YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
N+++ + SN V+L L W +A ++GL+YLH
Sbjct: 70 NLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLH 129
Query: 181 HDCV--------PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
D P+I HRD K N+LL S A LADFGLA G+
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
Y+AP L+ + + + D+Y+ G+VL E++S
Sbjct: 190 RYMAPE--VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G VYKA+ ++A K+ TK +EE ++ + EI IL H NIVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILHRD 191
++ +L + + E++ ++ L YLH + I+HRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG--KCKLQIIYGYT 249
+K NIL + LADFG++ N+ S + Y ++AP C+ Y
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPY-WMAPEVVMCETSKDRPYD 218
Query: 250 MNITEKSDVYSYGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 219 Y----KADVWSLGITLIEM 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 29/297 (9%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ + + +SD++S G+ L+E+ GR + P E + M FE
Sbjct: 175 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-----EDSRPPMAIFELL 222
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPEEL 356
I++ LP + Q C+ +PAER +K+++ +S EE+
Sbjct: 223 DYIVNEPPPKLPSGVFSLEFQDF--VNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 277
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + K + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 78 LR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 126 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 183 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G VYKA+ ++A K+ TK +EE ++ + EI IL H NIVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILHRD 191
++ +L + + E++ ++ L YLH + I+HRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG--KCKLQIIYGYT 249
+K NIL + LADFG++ +T G+ ++AP C+ Y
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 250 MNITEKSDVYSYGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 219 Y----KADVWSLGITLIEM 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 57/229 (24%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + K + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQG---------- 175
L Y + S D+ ET Y++A ++
Sbjct: 78 LR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 176 ---------LAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLM--NSTNYHH 223
LAY+H I HRD+K N+LLD L DFG AK + N +
Sbjct: 126 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 224 AMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
SR Y AP ++I+G T + T DV+S G VL E+L G+
Sbjct: 183 ICSRY-----YRAP-----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G VYKA+ ++A K+ TK +EE ++ + EI IL H NIVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILHRD 191
++ +L + + E++ ++ L YLH + I+HRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG--KCKLQIIYGYT 249
+K NIL + LADFG++ +T G+ ++AP C+ Y
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 250 MNITEKSDVYSYGVVLLEI 268
K+DV+S G+ L+E+
Sbjct: 219 Y----KADVWSLGITLIEM 233
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LK V+G G G VYK +P GE + A+K L +T + V+ F E I+ +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMD 98
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H ++V+LLG C + +++L+ + V A+G+ YL
Sbjct: 99 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
++HRD+ N+L+ S + DFGLA+L+ + ++A
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA----- 210
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILS 270
L+ I + T +SDV+SYGV + E+++
Sbjct: 211 LECI--HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 62 NILECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGH 119
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAY 178
+ H NIVKLL ++ L++ ++ K + QGLA+
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIA 236
H V LHRD+K N+L++++ LADFGLA+ Y H + + Y A
Sbjct: 126 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRA 178
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
P +I+ G T D++S G + E+++ R+
Sbjct: 179 P-----EILLGXKYYST-AVDIWSLGCIFAEMVTRRA 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 73 IGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR---HRNIVKL 128
IG G G VYKA P+ G +A+K + +E S E+ +L + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 129 LGYC----SNKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIAVGSAQGLAYLHHD 182
+ C +++ +K+ L++ ++ ET + +GL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
C I+HRD+K NIL+ S LADFGLA++ +Y A+ V + Y AP + L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAP-EVLL 184
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEIL 269
Q Y + D++S G + E+
Sbjct: 185 QSTYATPV------DMWSVGCIFAEMF 205
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 72 VIGK-GCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
+IG+ G G VYKA+ ++A K+ TK +EE ++ + EI IL H NIVKLL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLD 74
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILH 189
++ +L + + E++ ++ L YLH + I+H
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 131
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG--KCKLQIIYG 247
RD+K NIL + LADFG++ T S + Y ++AP C+
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRP 190
Query: 248 YTMNITEKSDVYSYGVVLLEI 268
Y K+DV+S G+ L+E+
Sbjct: 191 YDY----KADVWSLGITLIEM 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGXKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 106
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 107 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 156
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 207
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 208 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 265
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 266 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 309
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 310 FRDLALRVDQIRD 322
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 76 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 125
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK---------EP 176
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 177 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 235 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 278
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 279 FRDLALRVDQIRD 291
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 79
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 80 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 129
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 180
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 181 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 238
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 239 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 282
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 283 FRDLALRVDQIRD 295
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 76
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 77 YKGVCYSAGRRNLKLIM-EYLP---------YGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HR++ NIL++++ + DFGL K++ ++ + P
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK---------EP 177
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 178 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 235
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 236 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 279
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 280 FRDLALRVDQIRD 292
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + E D F E +++ + H +V+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L++ ++ ET + + +G+AYL CV +HRD
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD 148
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 200
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 201 YSSKSDVWSFGVLMWEVFS 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 81
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 82 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 131
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 182
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 183 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 240
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 241 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 284
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 285 FRDLALRVDQIRD 297
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 44/278 (15%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N L+ + +ADFGL++LM Y AP K I +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-------------YTAPAGAKFPIKWTAP 182
Query: 250 MNI-----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
++ + KSDV+++GV+L EI + + P I D + E ++K P
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP------ 235
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
+G P++ V E+++ C +P++RP+ E+
Sbjct: 236 ---EGCPEK-VYELMRA------CWQWNPSDRPSFAEI 263
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 76 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 125
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 176
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 177 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 235 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 278
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 279 FRDLALRVDQIRD 291
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 74
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 75 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 133
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 186
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 187 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 235
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 236 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LK V+G G G VYK +P GE + A+K L +T + V+ F E I+ +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMD 75
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H ++V+LLG C + +++L+ + V A+G+ YL
Sbjct: 76 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
++HRD+ N+L+ S + DFGLA+L+ + ++A
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA----- 187
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILS 270
L+ I + T +SDV+SYGV + E+++
Sbjct: 188 LECI--HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 44/278 (15%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N L+ + +ADFGL++LM Y AP K I +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-------------YTAPAGAKFPIKWTAP 183
Query: 250 MNITE-----KSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
++ KSDV+++GV+L EI + + P I D + E ++K P
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP------ 236
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
+G P++ V E+++ C +P++RP+ E+
Sbjct: 237 ---EGCPEK-VYELMRA------CWQWNPSDRPSFAEI 264
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 78
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 79 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 128
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 179
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 180 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 238 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 281
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 282 FRDLALRVDQIRD 294
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 192
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 240
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 241 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 62 NILECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGH 119
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAY 178
+ H NIVKLL ++ L++ ++ K + QGLA+
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIA 236
H V LHRD+K N+L++++ LADFGLA+ Y H + + Y A
Sbjct: 126 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRA 178
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
P +I+ G T D++S G + E+++ R+
Sbjct: 179 P-----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 73
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 74 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 123
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 174
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 175 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 232
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 233 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 276
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 277 FRDLALRVDQIRD 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 82
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 83 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 132
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 183
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 184 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 241
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 242 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 285
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 286 FRDLALRVDQIRD 298
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 192
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 240
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 241 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEXXSVHNKTGAKLPVKW-MAL 205
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 258
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 259 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 296
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 138
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYN----- 191
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 192 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 239
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 240 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 266
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 80
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 81 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 130
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 181
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 182 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 239
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 240 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 283
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 284 FRDLALRVDQIRD 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 74
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 75 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 124
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 175
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 176 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 233
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 234 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 277
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 278 FRDLALRVDQIRD 290
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 76 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 125
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 176
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 177 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 235 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 278
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 279 FRDLALRVDQIRD 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 62
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 123 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 174
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 175 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 79
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 80 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 138
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 139 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 191
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 192 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 240
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 241 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 282
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 62
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 174
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 175 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 63
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 175
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 176 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 171
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 172 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 64
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 176
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 177 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 37 LPPGAEDFSYPWTF-IPFQKLN-FTIDNILECLKDENVIGKG-----CSGVVYKAEMPNG 89
+ PG + F P+TF P + + F + + C+K E VIG G CSG + ++P
Sbjct: 3 MTPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL---KLPGK 59
Query: 90 E--LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISX 147
+A+K L K+ E+ F +E I+G H N++ L G + + +++ ++
Sbjct: 60 REIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN 118
Query: 148 XXXXXXXXXXXXXDWETRYKIAVGSAQGLAY-LHHDCVPAILHRDVKCNNILLDSKYEAY 206
D + VG +G+A + + +HRD+ NIL++S
Sbjct: 119 GSLDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCK 175
Query: 207 LADFGLAKLMNSTNYHHAMSRVAGS---YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGV 263
++DFGL++ + + G + AP + + T SDV+SYG+
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-------KFTSASDVWSYGI 228
Query: 264 VLLEILS 270
V+ E++S
Sbjct: 229 VMWEVMS 235
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + +++ Y +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM- 133
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA--- 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPEC 240
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 241 PESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 62
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 123 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 174
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 175 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ IRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKIRHEK 74
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 187
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 239
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 240 CPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 122 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 173
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 174 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 203
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 93
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 94 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 143
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 194
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 195 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 253 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 296
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 297 FRDLALRVDQIRD 309
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLLYNYISX--XXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + +++ Y+S +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 187
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 239
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 240 CPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 171
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 172 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 171
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 172 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 173
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 174 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 203
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 69 DENVIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D VIG G GVVY+A++ +GEL+A+KK+ + K + E+QI+ + H NIV+
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVR 77
Query: 128 LLGYCSNKSVKL------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAY 178
L + + K L+ +Y+ + + Q LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+H I HRD+K N+LLD L DFG AK + +S + Y Y AP
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-YRAP 191
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
++I+G T + T DV+S G VL E+L G+
Sbjct: 192 -----ELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 122 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 173
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 174 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 192
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 240
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 241 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 192
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 240
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 241 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 173
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 174 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+G+G G V Y E N GE +AVK L K + + EI+IL ++ H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 128 LLGYCSN---KSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
G C+ +KL++ S + + + K AV +G+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N+L++S+++ + DFGL K + + + S + +C +Q
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ SDV+S+GV L E+L+
Sbjct: 205 KFYIA------SDVWSFGVTLHELLT 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 52 PFQKLNFTIDNILECLKDENVIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSF 110
P Q +FT ++ LKD IG+G G V K P+G+++AVK++ ++ DE+
Sbjct: 13 PEQHWDFTAED----LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQL 67
Query: 111 AAEIQILGHIRHRN---IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXD----WE 163
++ ++ +R + IV+ G + + +S D E
Sbjct: 68 LMDLDVV--MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE 125
Query: 164 TRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYH 222
KI + + + L +L + I+HRD+K +NILLD L DFG++ +L++S
Sbjct: 126 ILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI--- 180
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIY-GYTMNITEKSDVYSYGVVLLEILSGR 272
A +R AG Y+AP + GY + +SDV+S G+ L E+ +GR
Sbjct: 181 -AKTRDAGCRPYMAPERIDPSASRQGYDV----RSDVWSLGITLYELATGR 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 171
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 172 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + EE F E +++ + H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L++ ++ ET + + +G+AYL CV +HRD
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD 128
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 180
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 206
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 252
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 253 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 189
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 190 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 237
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 238 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 189
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 190 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 237
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 238 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 204
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 250
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 251 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 147
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 200
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 201 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 248
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 249 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 275
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 73/313 (23%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 93
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC- 183
G C +++KL++ Y+ D+ ++K + + L Y C
Sbjct: 94 YKGVCYSAGRRNLKLIM-EYLPYGSLR---------DYLQKHKERIDHIKLLQYTSQICK 143
Query: 184 ------VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+HRD+ NIL++++ + DFGL K++ + P
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EP 194
Query: 238 GKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG--- 282
G+ I + ++TE SDV+S+GVVL E+ + +S P IG+
Sbjct: 195 GESP--IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 283 ----LHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPT 338
H++E +K P G PD++ M + C N++ +RP+
Sbjct: 253 QMIVFHLIELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPS 296
Query: 339 MKEVVALLMEVKS 351
+++ + +++
Sbjct: 297 FRDLALRVDQIRD 309
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 187
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 235
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 236 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ +Y+ +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 211
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 257
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 258 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 302
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + EE F E +++ + H +V+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L++ ++ ET + + +G+AYL CV +HRD
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD 126
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 178
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 179 YSSKSDVWSFGVLMWEVFS 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 52 PFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFA 111
P++K + I E LK E +G G G V+ A +AVK + K V++F
Sbjct: 177 PWEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFL 231
Query: 112 AEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI--- 168
AE ++ ++H +VKL + + + + I+ D ++ +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTKEPIYI-----ITEFMAKGSLLDFLKSDEGSKQPLPKL 286
Query: 169 ---AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ A+G+A++ +HRD++ NIL+ + +ADFGLA+++ Y
Sbjct: 287 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---T 340
Query: 226 SRVAGSY--GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
+R + + AP I +G + T KSDV+S+G++L+EI++ P + +
Sbjct: 341 AREGAKFPIKWTAPE----AINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP- 392
Query: 284 HIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
++ +++ P + P+++ I M C + P ERPT + +
Sbjct: 393 EVIRALERGYRMPRP---------ENCPEEL-------YNIMMRCWKNRPEERPTFEYIQ 436
Query: 344 ALLMEVKSAPE 354
++L + +A E
Sbjct: 437 SVLDDFYTATE 447
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 64
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 176
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 177 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 52/298 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-HRALMSELKILIHIGHHLNV 94
Query: 126 VKLLGYCSNKSVKLLL------YNYISXXXXXXXXXXXXXXDWETRYK----------IA 169
V LLG C+ L++ + +S E YK +
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 170 VGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A+G+ +L C+ HRD+ NILL K + DFGLA+ +
Sbjct: 155 FQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 211 RLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEE 259
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 260 FCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 207
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 253
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 254 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 298
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 206
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 252
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 253 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 41/291 (14%)
Query: 70 ENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+ VIG G + VV A P E +A+K++ ++ + +D EIQ + H NIV
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 129 LGYCSNKSVKLLLYNYIS--------XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
K L+ +S D T I +GL YLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLM---NSTNYHHAMSRVAGSYGYIAP 237
+ +HRDVK NILL +ADFG++ + + G+ ++AP
Sbjct: 139 KN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFE 297
++ + GY K+D++S+G+ +E+ +G + H +K M + +
Sbjct: 196 E--VMEQVRGYDF----KADIWSFGITAIELATGAAP--------YHKYPPMKVLMLTLQ 241
Query: 298 PAVSILDTKLQGLPDQMVQEMLQTLGIAM-----FCVNSSPAERPTMKEVV 343
L+T +Q +EML+ G + C+ P +RPT E++
Sbjct: 242 NDPPSLETGVQD------KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 25/246 (10%)
Query: 31 ASGMSTLPPGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSG-VVYKAEMPNG 89
A+G S PG + P F+ F+ + K + V+GKG G V+ + G
Sbjct: 21 AAGTSG-GPGDHLHATPGMFVQHSTAIFS-----DRYKGQRVLGKGSFGEVILCKDKITG 74
Query: 90 ELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXX 148
+ AVK + K + + + +S E+Q+L + H NI+KL + +K L+ +
Sbjct: 75 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 134
Query: 149 XXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA--- 205
+I G+ Y+H + I+HRD+K N+LL+SK +
Sbjct: 135 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 191
Query: 206 YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVL 265
+ DFGL+ ++ M G+ YIAP ++++G EK DV+S GV+L
Sbjct: 192 RIIDFGLSTHFEASK---KMKDKIGTAYYIAP-----EVLHG---TYDEKCDVWSTGVIL 240
Query: 266 LEILSG 271
+LSG
Sbjct: 241 YILLSG 246
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 67
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 68 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 127 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 180
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 181 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 232
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 233 CPESLH---DLMCQ-----------CWRKEPEERPTFEYLQAFLEDYFTSTE 270
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + EE F E +++ + H +V+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L++ ++ ET + + +G+AYL CV +HRD
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD 131
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 183
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 184 YSSKSDVWSFGVLMWEVFS 202
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 25/246 (10%)
Query: 31 ASGMSTLPPGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSG-VVYKAEMPNG 89
A+G S PG + P F+ F+ + K + V+GKG G V+ + G
Sbjct: 22 AAGTSG-GPGDHLHATPGMFVQHSTAIFS-----DRYKGQRVLGKGSFGEVILCKDKITG 75
Query: 90 ELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXX 148
+ AVK + K + + + +S E+Q+L + H NI+KL + +K L+ +
Sbjct: 76 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 135
Query: 149 XXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA--- 205
+I G+ Y+H + I+HRD+K N+LL+SK +
Sbjct: 136 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 192
Query: 206 YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVL 265
+ DFGL+ ++ M G+ YIAP ++++G EK DV+S GV+L
Sbjct: 193 RIIDFGLSTHFEASK---KMKDKIGTAYYIAP-----EVLHG---TYDEKCDVWSTGVIL 241
Query: 266 LEILSG 271
+LSG
Sbjct: 242 YILLSG 247
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+G+G G V Y E N GE +AVK L K + + EI+IL ++ H NIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 128 LLGYCSN---KSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
G C+ +KL++ S + + + K AV +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N+L++S+++ + DFGL K + + + S + +C +Q
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ SDV+S+GV L E+L+
Sbjct: 193 KFYIA------SDVWSFGVTLHELLT 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 73 IGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIRHRNIVKLLG 130
IG+G GVVYKA GE++A+KK+ + + E V S A EI +L + H NIVKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLHHDCVPAILH 189
++ L++ ++ K + QGLA+ H V LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV---LH 125
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
RD+K N+L++++ LADFGLA+ Y H + + Y AP +I+ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP-----EILLG 176
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRS 273
T D++S G + E+++ R+
Sbjct: 177 CKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM T HA ++ + AP
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYN----- 185
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DPSQVYELLEKDYRMERP---------E 233
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 234 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 63
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 64 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 123 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 176
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 177 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 228
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 229 CPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 266
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 41/291 (14%)
Query: 70 ENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+ VIG G + VV A P E +A+K++ ++ + +D EIQ + H NIV
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 129 LGYCSNKSVKLLLYNYIS--------XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
K L+ +S D T I +GL YLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS---TNYHHAMSRVAGSYGYIAP 237
+ +HRDVK NILL +ADFG++ + + + G+ ++AP
Sbjct: 134 KN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFE 297
++ + GY K+D++S+G+ +E+ +G + H +K M + +
Sbjct: 191 E--VMEQVRGYDF----KADIWSFGITAIELATGAAP--------YHKYPPMKVLMLTLQ 236
Query: 298 PAVSILDTKLQGLPDQMVQEMLQTLGIAM-----FCVNSSPAERPTMKEVV 343
L+T +Q +EML+ G + C+ P +RPT E++
Sbjct: 237 NDPPSLETGVQD------KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
VIG G GVV++A++ + +A+KK+ + KR + E+QI+ ++H N+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVVDLKAF 100
Query: 132 CSNKSVKL------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHD 182
+ K L+ Y+ I + Q LAY+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 183 CVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
I HRD+K N+LLD L DFG AK++ + + +S + Y Y AP
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSRY-YRAP---- 210
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
++I+G T N T D++S G V+ E++ G+
Sbjct: 211 -ELIFGAT-NYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 34/288 (11%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M Y V G P K + +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEFDSVHNKTGAKLPVKW-MAL 265
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + + I ++ + +P
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP------ 318
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 319 ---EYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 356
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 78
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 79 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 137
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 138 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 190
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 191 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 239
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 240 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 281
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 69
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 181
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 182 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 230
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 231 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 75
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 134
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 135 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 188 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 236
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 237 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 36/293 (12%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 65
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 66 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 125 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 178
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +
Sbjct: 179 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------------------EV 215
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 216 LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM + HA ++ + AP
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP--IKWTAPESLAYN----- 185
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DPSQVYELLEKDYRMERP---------E 233
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 234 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 260
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 50/300 (16%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-------KIAVGSAQGLA 177
+V+L S + + YI +Y +A A G+A
Sbjct: 241 LVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYI 235
Y+ +HRD++ NIL+ +ADFGLA+L+ Y +R + +
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWT 348
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGS 295
AP +YG T KSDV+S+G++L E+ + P + V ++
Sbjct: 349 APEAA----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGM---------VNRE--- 389
Query: 296 FEPAVSILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
+LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 390 ------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 55/318 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ + +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLM 347
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDLD 314
Query: 348 EV--KSAPEELGKTSQPL 363
+ + EE SQPL
Sbjct: 315 RILTLTTNEEYLDLSQPL 332
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 38/294 (12%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYIAPGKC 240
+HRD++ NIL+ +ADFGLA+L+ Y +R + + AP
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAA 187
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 ----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCP 237
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 238 PECPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + ++ Y +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM- 133
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA--- 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPEC 240
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 241 PESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 50/300 (16%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-------KIAVGSAQGLA 177
+V+L S + + YI +Y +A A G+A
Sbjct: 241 LVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYI 235
Y+ +HRD++ NIL+ +ADFGLA+L+ Y +R + +
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWT 348
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGS 295
AP +YG T KSDV+S+G++L E+ + P + V ++
Sbjct: 349 APEAA----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGM---------VNRE--- 389
Query: 296 FEPAVSILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
+LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 390 ------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 59/306 (19%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 78
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
G C +++KL++ D + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ NIL++++ + DFGL K++ + PG+ I
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EPGESP--I 184
Query: 245 IYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG-------LHI 285
+ ++TE SDV+S+GVVL E+ + +S P IG+ H+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVAL 345
+E +K P G PD++ M + C N++ +RP+ +++
Sbjct: 245 IELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALR 288
Query: 346 LMEVKS 351
+ +++
Sbjct: 289 VDQIRD 294
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM T HA ++ + AP
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYN----- 185
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DPSQVYELLEKDYRMERP---------E 233
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 234 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 260
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 68 KDENVIGKGCSG-VVYKAEMPNGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNI 125
K + V+GKG G V+ + G+ AVK + K + + + +S E+Q+L + H NI
Sbjct: 35 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 94
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
+KL + +K L+ + +I G+ Y+H +
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--- 151
Query: 186 AILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I+HRD+K N+LL+SK + + DFGL+ ++ M G+ YIAP
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAP----- 203
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++++G EK DV+S GV+L +LSG
Sbjct: 204 EVLHG---TYDEKCDVWSTGVILYILLSG 229
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 52 PFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFA 111
P++K + I E LK E +G G G V+ A +AVK + K V++F
Sbjct: 4 PWEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFL 58
Query: 112 AEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI--- 168
AE ++ ++H +VKL + + + + I+ D ++ +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTKEPIYI-----ITEFMAKGSLLDFLKSDEGSKQPLPKL 113
Query: 169 ---AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ A+G+A++ +HRD++ NIL+ + +ADFGLA+++ Y A
Sbjct: 114 IDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAR 169
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+ AP I +G + T KSDV+S+G++L+EI++ P + + +
Sbjct: 170 EGAKFPIKWTAPE----AINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EV 221
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVAL 345
+ +++ P + P+++ I M C + P ERPT + + ++
Sbjct: 222 IRALERGYRMPRP---------ENCPEEL-------YNIMMRCWKNRPEERPTFEYIQSV 265
Query: 346 L 346
L
Sbjct: 266 L 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 59/306 (19%)
Query: 73 IGKGCSGVV----YKAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
+GKG G V Y N GE++AVKKL + EE + F EI+IL ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 78
Query: 128 LLGYC---SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
G C +++KL++ D + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ NIL++++ + DFGL K++ + PG+ I
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK---------EPGESP--I 184
Query: 245 IYGYTMNITEK-----SDVYSYGVVLLEILS--GRSAVQP-----QIGDG-------LHI 285
+ ++TE SDV+S+GVVL E+ + +S P IG+ H+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVAL 345
+E +K P G PD++ M + C N++ +RP+ +++
Sbjct: 245 IELLKNNGRLPRP---------DGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALR 288
Query: 346 LMEVKS 351
+ +++
Sbjct: 289 VDQIRD 294
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV K + LI +KL + + E+Q+L
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ E K+++ +GLAYL
Sbjct: 73 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y+AP +
Sbjct: 132 EKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMAPER 184
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 185 LQ-------GTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLLYNYISX--XXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 187
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 239
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 240 CPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 75
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 134
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 135 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 188 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 236
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 237 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 278
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 55/300 (18%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA---------------- 169
V LLG C+ L++ ++ YK+A
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLIC 143
Query: 170 --VGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 144 YSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIV 286
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I
Sbjct: 200 DARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKID 248
Query: 287 EWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
E +++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 249 EEFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 55/300 (18%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA---------------- 169
V LLG C+ L++ ++ YK+A
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLIC 143
Query: 170 --VGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 144 YSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIV 286
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I
Sbjct: 200 DARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKID 248
Query: 287 EWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
E +++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 249 EEFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + +++ Y +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM- 133
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAA--- 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPEC 240
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 241 PESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 77
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 78 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 136
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 137 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 189
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 190 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 238
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 239 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 280
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 69
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 181
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 182 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 230
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 231 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+KK+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGL++ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
+LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 55/300 (18%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA---------------- 169
V LLG C+ L++ ++ YK+A
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLIC 143
Query: 170 --VGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
A+G+ +L C+ HRD+ NILL K + DFGLA+ +
Sbjct: 144 YSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIV 286
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I
Sbjct: 200 DARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKID 248
Query: 287 EWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
E +++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 249 EEFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 52 PFQKLNFTIDNILECLKDENVIGKG-----CSGVVYKAEMPNGELIAVKKLWKTKRDEEP 106
P+ + F + + +K E VIG G C G + KA +A+K L K E
Sbjct: 1 PWGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRL-KAPGKKESCVAIKTL-KGGYTERQ 58
Query: 107 VDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
F +E I+G H NI++L G +N ++L ++ D +
Sbjct: 59 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN---DGQFTV 115
Query: 167 KIAVGSAQGLAY-LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
VG +G+A + + + +HRD+ NIL++S ++DFGL++ + +
Sbjct: 116 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY 175
Query: 226 SRVAGS---YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ G + AP + T SD +SYG+V+ E++S
Sbjct: 176 TSSLGGKIPIRWTAPEAIAFR-------KFTSASDAWSYGIVMWEVMS 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 64
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + ++ Y +A A G+AY+
Sbjct: 65 LVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM- 123
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 124 --NYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAA--- 177
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +L
Sbjct: 178 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------------------EVL 215
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
D +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 216 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM T HA ++ + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYN----- 192
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 240
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 241 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 267
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 50/300 (16%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-------KIAVGSAQGLA 177
+V+L S + + YI +Y +A A G+A
Sbjct: 241 LVQLYAVVSEEPI------YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYI 235
Y+ +HRD++ NIL+ +ADFGLA+L+ Y +R + +
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWT 348
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGS 295
AP +YG T KSDV+S+G++L E+ + P + V ++
Sbjct: 349 APEAA----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGM---------VNRE--- 389
Query: 296 FEPAVSILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
+LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 390 ------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G +G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 69
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYIAPGKCK 241
+HRD++ NIL+ +ADFGLA+L+ +R + + AP
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDA---EXTAREGAKFPIKWTAPEA-- 181
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVS 301
I YG T KSDV+S+G++L EI++ P + + + + + E
Sbjct: 182 --INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYR 228
Query: 302 ILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
++ PD +E+ Q + + C P +RPT + ++L + +A E
Sbjct: 229 MVR------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 FVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 68 KDENVIGKGCSG-VVYKAEMPNGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNI 125
K + V+GKG G V+ + G+ AVK + K + + + +S E+Q+L + H NI
Sbjct: 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
+KL + +K L+ + +I G+ Y+H +
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--- 145
Query: 186 AILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I+HRD+K N+LL+SK + + DFGL+ ++ M G+ YIAP
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAP----- 197
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++++G EK DV+S GV+L +LSG
Sbjct: 198 EVLHG---TYDEKCDVWSTGVILYILLSG 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 55/318 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE P + K+ K E+ + +E++++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI---------------- 168
I+ LLG C+ ++ Y S E Y I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A+G+ YL C+ HRD+ N+L+ +ADFGLA+ +N+ + +
Sbjct: 163 TYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + +Y T +SDV+S+GV++ EI + + P G+ + E
Sbjct: 219 GRLPVKWMAP-EALFDRVY------THQSDVWSFGVLMWEIFTLGGSPYP----GIPVEE 267
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLM 347
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 268 LFK----------LLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDLD 314
Query: 348 EV--KSAPEELGKTSQPL 363
+ + EE SQPL
Sbjct: 315 RILTLTTNEEYLDLSQPL 332
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 FVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A A+G+ YL C+ HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 197 AYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 253 GRLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEE 301
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 302 LFK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 347
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 127 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAG 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 178 FVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 64
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 65 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 123
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 124 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 176
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 177 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 225
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 226 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM T HA ++ + AP
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYN----- 188
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 189 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 236
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 237 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 263
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVD-SFAAEI 114
+FTID+ + +GKG G VY A E + ++A+K L+K++ ++E V+ EI
Sbjct: 19 HFTIDD----FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 115 QILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ 174
+I H+ H NI++L Y ++ L+ Y D + I A
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L Y H ++HRD+K N+LL K E +ADFG + S + G+ Y
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RKTMCGTLDY 187
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ P ++I G N EK D++ GV+ E+L G
Sbjct: 188 LPP-----EMIEGRMHN--EKVDLWCIGVLCYELLVG 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 34/297 (11%)
Query: 70 ENVIGKGCSG-VVY-KAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
E +IG G SG V Y + +P + V K K E F +E I+G H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL-AYLHHDCVP 185
+L G + + +++ Y+ D + VG +G+ A + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS--YGYIAPGKCKLQ 243
+HRD+ N+L+DS ++DFGL++++ + A + G + AP +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+ SDV+S+GVV+ E+L+ G+ + + + S E +
Sbjct: 230 -------TFSSASDVWSFGVVMWEVLA--------YGERPYWNMTNRDVISSVEEGYRL- 273
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPEELGKTS 360
G P + Q ML C + A+RP ++V++L + +PE L T+
Sbjct: 274 -PAPMGCPHALHQLMLD-------CWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 42/292 (14%)
Query: 72 VIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
VIG+G G VY + +G+ I AVK L + D V F E I+ H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 128 LLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG--SAQGLAYLHHDCV 184
LLG C ++ L++ Y+ + + I G A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
+HRD+ N +LD K+ +ADFGLA+ M + ++ LQ
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ- 211
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T T KSDV+S+GV+L E+++ + P + +F+ V +L
Sbjct: 212 ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--------------NTFDITVYLLQ 253
Query: 305 TKL----QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ + PD + + ML+ C + RP+ E+V+ + + S
Sbjct: 254 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFST 298
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 76
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 137 I-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 187
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 188 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 205 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 253
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 254 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 298
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 151 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 201
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 202 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + IG G G V A + G +AVKKL + +
Sbjct: 16 QELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 136 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTG 186
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 187 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 89
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 150 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 200
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 201 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 34/297 (11%)
Query: 70 ENVIGKGCSG-VVY-KAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
E +IG G SG V Y + +P + V K K E F +E I+G H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL-AYLHHDCVP 185
+L G + + +++ Y+ D + VG +G+ A + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS--YGYIAPGKCKLQ 243
+HRD+ N+L+DS ++DFGL++++ + A + G + AP +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+ SDV+S+GVV+ E+L+ G+ + + + S E +
Sbjct: 230 -------TFSSASDVWSFGVVMWEVLA--------YGERPYWNMTNRDVISSVEEGYRL- 273
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPEELGKTS 360
G P + Q ML C + A+RP ++V++L + +PE L T+
Sbjct: 274 -PAPMGCPHALHQLMLD-------CWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 127 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 178 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 32/291 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + ++ Y ++ A G+AY+
Sbjct: 72 LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM- 130
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA--- 184
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 185 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPEC 237
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 238 PESLH---DLMCQ-----------CWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 34/273 (12%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSN---KSVKLLLYNY 144
GE++AVK L K + + EI IL + H +I+K G C + KS++L++ Y
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM-EY 99
Query: 145 ISXXXXXXXXXXXXXXDWETRYKIAVGS--------AQGLAYLHHDCVPAILHRDVKCNN 196
+ D+ R+ I + +G+AYLH +HR++ N
Sbjct: 100 VPLGSLR---------DYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARN 147
Query: 197 ILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKS 256
+LLD+ + DFGLAK + + ++ + S + +C + + Y S
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA------S 201
Query: 257 DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQ 316
DV+S+GV L E+L+ + Q L ++ + +M + + PD+
Sbjct: 202 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPC 261
Query: 317 EMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
E+ + C + + RPT + ++ +L V
Sbjct: 262 EVYH---LMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 44/229 (19%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQIL---GHI 120
+K ++VIG+G G V KA + L A+K++ + ++ D FA E+++L GH
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGH- 74
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------- 173
H NI+ LLG C ++ L Y + + + IA +A
Sbjct: 75 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 174 ---------QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA 224
+G+ YL +HRD+ NIL+ Y A +ADFGL
Sbjct: 134 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL------------ 178
Query: 225 MSRVAGSYGYIAPGKCKLQIIYGYTMN---ITEKSDVYSYGVVLLEILS 270
SR Y G+ ++ + ++N T SDV+SYGV+L EI+S
Sbjct: 179 -SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 206 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 254
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 255 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 299
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 40/295 (13%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 323
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 324 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYIAPGKC 240
+HRD++ NIL+ +ADFGLA+L+ Y +R + + AP
Sbjct: 383 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAA 436
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+YG T KSDV+S+G++L E+ + P + V ++
Sbjct: 437 ----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGM---------VNRE-------- 472
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
+LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 473 -VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 95
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 156 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 212 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 260
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 261 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 44/229 (19%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQIL---GHI 120
+K ++VIG+G G V KA + L A+K++ + ++ D FA E+++L GH
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGH- 84
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------- 173
H NI+ LLG C ++ L Y + + + IA +A
Sbjct: 85 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 174 ---------QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA 224
+G+ YL +HRD+ NIL+ Y A +ADFGL
Sbjct: 144 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL------------ 188
Query: 225 MSRVAGSYGYIAPGKCKLQIIYGYTMN---ITEKSDVYSYGVVLLEILS 270
SR Y G+ ++ + ++N T SDV+SYGV+L EI+S
Sbjct: 189 -SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 154 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 210 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 258
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 259 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 213 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 261
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 262 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 306
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 32/272 (11%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVK--LLLYNYI 145
GE++AVK L K + + EI IL + H +I+K G C + L+ Y+
Sbjct: 59 TGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 146 SXXXXXXXXXXXXXXDWETRYKIAVGS--------AQGLAYLHHDCVPAILHRDVKCNNI 197
D+ R+ I + +G+AYLH +HRD+ N+
Sbjct: 118 PLGSLR---------DYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNV 165
Query: 198 LLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSD 257
LLD+ + DFGLAK + + + + S + +C + + Y SD
Sbjct: 166 LLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYA------SD 219
Query: 258 VYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQE 317
V+S+GV L E+L+ + Q L ++ + +M + + PD+ E
Sbjct: 220 VWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE 279
Query: 318 MLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+ + C + + RPT + ++ +L V
Sbjct: 280 VYHLM---KNCWETEASFRPTFENLIPILKTV 308
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 130
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 191 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 247 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 295
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 296 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 213 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 261
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 262 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 202 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 250
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 251 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 295
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 34/273 (12%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSN---KSVKLLLYNY 144
GE++AVK L K + + EI IL + H +I+K G C + KS++L++ Y
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM-EY 99
Query: 145 ISXXXXXXXXXXXXXXDWETRYKIAVGS--------AQGLAYLHHDCVPAILHRDVKCNN 196
+ D+ R+ I + +G+AYLH +HR++ N
Sbjct: 100 VPLGSLR---------DYLPRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARN 147
Query: 197 ILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKS 256
+LLD+ + DFGLAK + + ++ + S + +C + + Y S
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA------S 201
Query: 257 DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQ 316
DV+S+GV L E+L+ + Q L ++ + +M + + PD+
Sbjct: 202 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPC 261
Query: 317 EMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
E+ + C + + RPT + ++ +L V
Sbjct: 262 EVYH---LMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 71
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 72 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 130
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 131 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 183
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 184 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 232
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 233 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 69
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 181
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 182 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 230
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 231 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M
Sbjct: 151 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXG 201
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 202 XVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL K +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR 82
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 143 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 193
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 194 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+ K+ + + E V S A EI +L +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 172
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 173 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIR 121
+E + IG+G GVVYKA GE++A+ K+ + + E V S A EI +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS-AQGLAYLH 180
H NIVKLL ++ L++ ++ K + QGLA+ H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN--STNYHHAMSRVAGSYGYIAPG 238
V LHRD+K N+L++++ LADFGLA+ Y H + + Y AP
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAP- 171
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+I+ G T D++S G + E+++ R+
Sbjct: 172 ----EILLGCKYYST-AVDIWSLGCIFAEMVTRRA 201
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD+ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 134 ---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA-- 187
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSI 302
+YG T KSDV+S+G++L E+ + P + + +++ V++ G P
Sbjct: 188 --LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVER--GYRMPCPPE 239
Query: 303 LDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
L D M Q C P ERPT + + A L + ++ E
Sbjct: 240 CPESLH---DLMCQ-----------CWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 73 IGKGCSGVVYKAEMPN-GELIAVKKLWKTKRDEE----PVDSF--AAEIQILGHIRHRNI 125
IG G G VYKA P+ G +A+K + P+ + A ++ L H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 126 VKLLGYC----SNKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIAVGSAQGLAYL 179
V+L+ C +++ +K+ L++ ++ ET + +GL +L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 180 HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H +C I+HRD+K NIL+ S LADFGLA++ +Y A++ V + Y AP +
Sbjct: 137 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAP-E 189
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
LQ Y + D++S G + E+
Sbjct: 190 VLLQSTYATPV------DMWSVGCIFAEMF 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 70
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 71 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 129
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ N A + AP
Sbjct: 130 --NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA---- 182
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 183 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 231
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 232 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 62 NILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDS--FA----AEI 114
NI + ++++G+G GVV A P GE++A+KK+ EP D FA EI
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREI 60
Query: 115 QILGHIRHRNIVKLLGYCSNKSVKLLLYNYI----SXXXXXXXXXXXXXXDWETRYKIAV 170
+IL H +H NI+ + S + YI D +Y I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-Y 119
Query: 171 GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--------TNYH 222
+ + + LH V +HRD+K +N+L++S + + DFGLA++++ T
Sbjct: 120 QTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
M+ + Y AP Y M DV+S G +L E+ R
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAM------DVWSCGCILAELFLRR 220
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + EE F E +++ + H +V+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L+ ++ ET + + +G+AYL CV +HRD
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 181
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 182 YSSKSDVWSFGVLMWEVFS 200
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 123/296 (41%), Gaps = 49/296 (16%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE-HRALMSELKILIHIGHHLNV 95
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDW-----ETRYK----------IAV 170
V LLG C+ L++ ++ E YK +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 171 GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG 230
A+G+ +L +HRD+ NILL K + DFGLA+ +
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK 290
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 213 PLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFC 261
Query: 291 KKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 262 RRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 136 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTG 186
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 187 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 35/297 (11%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 82 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 141 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 193
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ + + +SD++S G+ L+E+ GR IG G M FE
Sbjct: 194 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYP----IGSG-------SGSMAIFELL 235
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPEEL 356
I++ LP + Q C+ +PAER +K+++ +S EE+
Sbjct: 236 DYIVNEPPPKLPSGVFSLEFQDF--VNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 290
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ +
Sbjct: 154 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 210 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 258
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 259 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 142 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTG 192
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 193 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 61 DNILECLKDENVIGKGCSGVVYKA-EMPNG-ELIAVKKLWKTKRDEEPVDSFAAEIQILG 118
D EC+ + IG+G G V+KA ++ NG +A+K++ +E S E+ +L
Sbjct: 10 DQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 119 HIR---HRNIVKLLGYCS----NKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIA 169
H+ H N+V+L C+ ++ KL L++ ++ ET +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
+GL +LH ++HRD+K NIL+ S + LADFGLA++ ++ A++ V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+ Y AP + LQ Y + D++S G + E+
Sbjct: 181 VTLWYRAP-EVLLQSSYATPV------DLWSVGCIFAEMF 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 62 NILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDS--FA----AEI 114
NI + ++++G+G GVV A P GE++A+KK+ EP D FA EI
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREI 60
Query: 115 QILGHIRHRNIVKLLGYCSNKSVKLLLYNYI----SXXXXXXXXXXXXXXDWETRYKIAV 170
+IL H +H NI+ + S + YI D +Y I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-Y 119
Query: 171 GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--------TNYH 222
+ + + LH V +HRD+K +N+L++S + + DFGLA++++ T
Sbjct: 120 QTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
M+ + Y AP Y M DV+S G +L E+ R
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAM------DVWSCGCILAELFLRR 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 40/295 (13%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGNMSPEAFLQEAQVMKKLRHEK 241
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXX--DWETRYKIAVGSAQGLAYLHHD 182
+V+L S + + ++ Y+S +A A G+AY+
Sbjct: 242 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 299
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY--GYIAPGKC 240
+HRD++ NIL+ +ADFGL +L+ Y +R + + AP
Sbjct: 300 --MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY---TARQGAKFPIKWTAPEAA 354
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+YG T KSDV+S+G++L E+ + P + V ++
Sbjct: 355 ----LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGM---------VNRE-------- 390
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
+LD +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 391 -VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 444
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNIVKL 128
+ +G G G V E G +AVK L + K R + V EIQ L RH +I+KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
S + ++ Y+S + ++ + Y H V +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV---V 133
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD+ A +ADFGL+ +M+ + + GS Y AP ++I G
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAP-----EVISG- 184
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
+ + D++S GV+L +L G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G VYKA+ +A K+ +TK +EE ++ + EI+IL H IVKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-LEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILHRD 191
+ ++ + E + ++ + L +LH I+HRD
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 134
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+L+ + + LADFG++ N S + Y ++AP +++ TM
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAP-----EVVMCETMK 187
Query: 252 ITE---KSDVYSYGVVLLEI 268
T K+D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ +
Sbjct: 145 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 201 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 249
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 250 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 137 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTG 187
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 188 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ Y+ + +A + + YL +H
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIH 153
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
RD+ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYN----- 206
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
T +I KSDV+++GV+L EI + + P I D + + ++K +P +
Sbjct: 207 TFSI--KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYDLLEKGYRMEQP---------E 254
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P + V E+++ C SPA+RP+ E
Sbjct: 255 GCPPK-VYELMRA------CWKWSPADRPSFAET 281
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 XVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 154 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 204
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 205 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 133 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTG 183
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 184 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ +G G G V A + G +AVKKL + +
Sbjct: 21 QELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 80
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 141 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 191
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 192 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNIVKL 128
+ +G G G V E G +AVK L + K R + V EIQ L RH +I+KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
S + ++ Y+S + ++ + Y H V +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV---V 133
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD+ A +ADFGL+ +M+ + + GS Y AP ++I G
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSCGSPNYAAP-----EVISG- 184
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
+ + D++S GV+L +L G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 133 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 183
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 184 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 61 DNILECLKDENVIGKGCSGVVYKA-EMPNG-ELIAVKKLWKTKRDEEPVDSFAAEIQILG 118
D EC+ + IG+G G V+KA ++ NG +A+K++ +E S E+ +L
Sbjct: 10 DQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 119 HIR---HRNIVKLLGYCS----NKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIA 169
H+ H N+V+L C+ ++ KL L++ ++ ET +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
+GL +LH ++HRD+K NIL+ S + LADFGLA++ ++ A++ V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+ Y AP + LQ Y + D++S G + E+
Sbjct: 181 VTLWYRAP-EVLLQSSYATPV------DLWSVGCIFAEMF 213
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 198 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 246
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 247 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 291
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 138 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 188
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 189 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 73
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGXLLDYVREHKDNIGSQYLLNW 123
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 181 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 89
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 150 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 200
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 201 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 136 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 186
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 187 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 10 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 69
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 130 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 180
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 181 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 66
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 127 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 178 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 90
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 151 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 201
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 202 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVD---SFAAEIQILGHIRHRNIVKL 128
IG+G G V+ + + L+AVK + R+ P D F E +IL H NIV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 129 LGYCSNKSVKLLLYNYIS-XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+G C+ K ++ + +T ++ +A G+ YL C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+ N L+ K ++DFG+++ Y + + AP + YG
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA----LNYG 290
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
+ +SDV+S+G++L E S ++ P + + E+V+K G P +
Sbjct: 291 ---RYSSESDVWSFGILLWETFSLGASPYPNLSNQ-QTREFVEK--GGRLPCPEL----- 339
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
PD + + M Q C P +RP+ + L ++
Sbjct: 340 --CPDAVFRLMEQ-------CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 128 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 178
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 179 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 137 I-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 187
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 188 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 142 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 192
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 193 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 133 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 183
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 184 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E Y
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A A+G+ YL +HRD+ N+L+ +ADFGLA+ ++ +Y+ +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEW 288
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 213 RLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEEL 261
Query: 289 VKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
K + + P E+ + C ++ P++RPT K++V L
Sbjct: 262 FK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 306
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E LK +G G G V+ +AVK L K+ D+F AE ++ ++H+
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQR 65
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L + + + ++ Y +A A+G+A++
Sbjct: 66 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 124
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HR+++ NIL+ +ADFGLA+L+ Y A + AP
Sbjct: 125 --NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA---- 177
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
I YG T KSDV+S+G++L EI++ P + + + + + E ++
Sbjct: 178 INYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMV 226
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSA 352
PD +E+ Q + + C P +RPT + ++L + +A
Sbjct: 227 R------PDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 143 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 193
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 194 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 137 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 187
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 188 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 136 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 186
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 187 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 143 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 193
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 194 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 128 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 178
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 179 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 9 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 68
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 129 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 179
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 180 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G V+KA+ E++A+K++ DE S EI +L ++H+NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+ L++ + D E +GL + H +LHRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 192 VKCNNILLDSKYEAYLADFGLAK 214
+K N+L++ E LADFGLA+
Sbjct: 127 LKPQNLLINRNGELKLADFGLAR 149
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 53/299 (17%)
Query: 73 IGKGCSGVVYKAE------MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR-NI 125
+G+G G V +A+ +AVK L + E + +E++IL HI H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 126 VKLLGYCSNKSVKLL----------LYNYISXXXXXXXXXXXXXXDWETRYKI------- 168
V LLG C+ L+ L Y+ D +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
+ A+G+ +L C+ HRD+ NILL K + DFGLA+ +
Sbjct: 154 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E
Sbjct: 210 ARLPLKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDE 258
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 259 EFCRRLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 133 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 183
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 184 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 76
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 184 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G VYKA+ +A K+ +TK +EE ++ + EI+IL H IVKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-LEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILHRD 191
+ ++ + E + ++ + L +LH I+HRD
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 142
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+L+ + + LADFG++ N S + Y ++AP +++ TM
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAP-----EVVMCETMK 195
Query: 252 ITE---KSDVYSYGVVLLEI 268
T K+D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 75
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 183 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AVK + KT+ + + E++I+ + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + GS Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 116/292 (39%), Gaps = 34/292 (11%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E L+ E +G+GC G V+ +A+K L K ++F E Q++ +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 125 IVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+V+L S + + ++ Y ++ A G+AY+
Sbjct: 72 LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM- 130
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD++ NIL+ +ADFGLA+L+ + A + AP
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-TARQGAKFPIKWTAPEAA--- 184
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSIL 303
+YG T KSDV+S+G++L E+ + P + + +L
Sbjct: 185 -LYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVN------------------REVL 222
Query: 304 DTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLMEVKSAPE 354
D +G E ++L M C P ERPT + + A L + ++ E
Sbjct: 223 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 73
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 123
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 181 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 74
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 182 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKAE----MPNGELIAVKKLWKTK--RDEEPVDSFAAE 113
I+N E LK V+G G G V+ G+L A+K L K + + + E
Sbjct: 53 IEN-FELLK---VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE 108
Query: 114 IQILGHIRHRNIVKLLGYCSNKSVKL-LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
Q+L HIR + L Y KL L+ +YI+ T +++ +
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF---TEHEVQIYV 165
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
+ + L H I++RD+K NILLDS L DFGL+K + A G+
Sbjct: 166 GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTI 224
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
Y+AP I+ G + D +S GV++ E+L+G S
Sbjct: 225 EYMAP-----DIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AVK + KT+ + + E++I+ + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + GS Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 61 DNILECLKDENVIGKGCSGVVYKA-EMPNG-ELIAVKKLWKTKRDEEPVDSFAAEIQILG 118
D EC+ + IG+G G V+KA ++ NG +A+K++ +E S E+ +L
Sbjct: 10 DQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 119 HIR---HRNIVKLLGYCS----NKSVKL-LLYNYISXXXXXXXXXXXXX-XDWETRYKIA 169
H+ H N+V+L C+ ++ KL L++ ++ ET +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
+GL +LH ++HRD+K NIL+ S + LADFGLA++ ++ A++ V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+ Y AP + LQ Y + D++S G + E+
Sbjct: 181 VTLWYRAP-EVLLQSSYATPV------DLWSVGCIFAEMF 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 33/246 (13%)
Query: 40 GAEDFSYPWTF-IPFQKLN-FTIDNILECLKDENVIGKG-----CSGVVYKAEMPNGE-- 90
G F P+TF P Q + F + C+K E VIG G CSG + ++P
Sbjct: 2 GVRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG---RLKVPGKREI 58
Query: 91 LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXX 150
+A+K L D++ D F +E I+G H NI+ L G + +++ Y+
Sbjct: 59 CVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 151 XXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYE 204
+ R+ + G G+ YL + +HRD+ NIL++S
Sbjct: 118 DAFLRKN-----DGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLV 169
Query: 205 AYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVV 264
++DFG+++++ +R G P + Y T SDV+SYG+V
Sbjct: 170 CKVSDFGMSRVLEDDPEAAYTTR-----GGKIPIRWTAPEAIAYR-KFTSASDVWSYGIV 223
Query: 265 LLEILS 270
+ E++S
Sbjct: 224 MWEVMS 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ H
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDE 178
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ GY+A + I M+ + D++S G ++ E+L+GR+
Sbjct: 179 MT---GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 63 ILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-- 120
+LEC +GKG G V++ GE +AVK + RDE+ S+ E ++ +
Sbjct: 41 LLEC------VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEK---SWFRETELYNTVML 88
Query: 121 RHRNIVKLLG---YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
RH NI+ + + S +L L + D + +I + A GLA
Sbjct: 89 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLA 148
Query: 178 YLHHDCV-----PAILHRDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSR-VAG 230
+LH + PAI HRD+K NIL+ + +AD GLA + + STN + G
Sbjct: 149 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 208
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
+ Y+AP + + I + ++ D++++G+VL E+
Sbjct: 209 TKRYMAP-EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 63 ILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-- 120
+LEC +GKG G V++ GE +AVK + RDE+ S+ E ++ +
Sbjct: 12 LLEC------VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEK---SWFRETELYNTVML 59
Query: 121 RHRNIVKLLG---YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
RH NI+ + + S +L L + D + +I + A GLA
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLA 119
Query: 178 YLHHDCV-----PAILHRDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSR-VAG 230
+LH + PAI HRD+K NIL+ + +AD GLA + + STN + G
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
+ Y+AP + + I + ++ D++++G+VL E+
Sbjct: 180 TKRYMAP-EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ H
Sbjct: 138 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTADE 185
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ GY+A + I M+ + D++S G ++ E+L+GR+
Sbjct: 186 MT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 62 NILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDS--FA----AEI 114
NI + ++++G+G GVV A P GE++A+KK+ EP D FA EI
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREI 60
Query: 115 QILGHIRHRNIVKLLGYCSNKSVKLLLYNYI----SXXXXXXXXXXXXXXDWETRYKIAV 170
+IL H +H NI+ + S + YI D +Y I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-Y 119
Query: 171 GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--------TNYH 222
+ + + LH V +HRD+K +N+L++S + + DFGLA++++ T
Sbjct: 120 QTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 223 HAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
M + Y AP Y M DV+S G +L E+ R
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAM------DVWSCGCILAELFLRR 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 63 ILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-- 120
+LEC +GKG G V++ GE +AVK + RDE+ S+ E ++ +
Sbjct: 12 LLEC------VGKGRYGEVWRGSW-QGENVAVKIF--SSRDEK---SWFRETELYNTVML 59
Query: 121 RHRNIVKLLG---YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
RH NI+ + + S +L L + D + +I + A GLA
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLA 119
Query: 178 YLHHDCV-----PAILHRDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSR-VAG 230
+LH + PAI HRD+K NIL+ + +AD GLA + + STN + G
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
+ Y+AP + I + ++ D++++G+VL E+
Sbjct: 180 TKRYMAPEVLD-ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IG G G+V+ N + +A+K + + EE F E +++ + H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXX-XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ L++ ++ ET + + +G+AYL +++HRD
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRD 128
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+ ++DFG+ + + Y S G P K ++ ++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFS-R 180
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+S+GV++ E+ S
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ H
Sbjct: 138 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTADE 185
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ GY+A + I M+ + D++S G ++ E+L+GR+
Sbjct: 186 MT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 50/302 (16%)
Query: 73 IGKGCSGVVYKAE----MPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G V+ AE +P + L+AVK L + E F E ++L ++H++IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 77
Query: 127 KLLGYCSNKSVKLLLYNYI---------------SXXXXXXXXXXXXXXDWETRYKIAVG 171
+ G C+ L+++ Y+ + +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A G+ YL +HRD+ N L+ + DFG+++ + ST+Y+ R
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++ P I+Y T +SDV+S+GVVL EI + QP W
Sbjct: 195 IRWMPPES----ILY---RKFTTESDVWSFGVVLWEIFT--YGKQP----------WY-- 233
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKS 351
++ + E I + P E+ I C P +R ++K+V A L +
Sbjct: 234 QLSNTEAIDCITQGRELERPRACPPEV---YAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
Query: 352 AP 353
AP
Sbjct: 291 AP 292
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G V+ +A+K L K +SF E QI+ ++H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL---KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR-------YKIAVGSAQGLAYLHHDCVP 185
S + + YI D E R +A A G+AY+
Sbjct: 74 SEEPI------YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM--- 124
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRD++ NIL+ + +ADFGLA+L+ N A + AP +
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIED-NEXTARQGAKFPIKWTAPEAA----L 179
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDT 305
YG T KSDV+S+G++L E+++ P + + ++E V++ G P
Sbjct: 180 YG---RFTIKSDVWSFGILLTELVTKGRVPYPGM-NNREVLEQVER--GYRMPCP----- 228
Query: 306 KLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPE 354
Q P + + M+ C P ERPT + + + L + +A E
Sbjct: 229 --QDCPISLHELMIH-------CWKKDPEERPTFEYLQSFLEDYFTATE 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 341
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
R++ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 394
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 395 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 442
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 443 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 469
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 37/296 (12%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 66 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKC 240
I+HRDVK +NIL++S+ E L DFG++ + + G+ Y++P +
Sbjct: 125 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFVGTRSYMSPERL 178
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+ + + +SD++S G+ L+E+ GR + + M FE
Sbjct: 179 Q-------GTHYSVQSDIWSMGLSLVEMAVGR---------------YPRPPMAIFELLD 216
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAPEEL 356
I++ LP + Q C+ +PAER +K+++ +S EE+
Sbjct: 217 YIVNEPPPKLPSAVFSLEFQDF--VNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 270
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AVK + KT+ + + E++I+ + H NIVKL
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXX---XXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ---YCHQKF---I 127
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + GS Y AP ++ G
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP-----ELFQG 179
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 180 KKYDGPE-VDVWSLGVILYTLVSG 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ H
Sbjct: 138 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTADE 185
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ GY+A + I M+ + D++S G ++ E+L+GR+
Sbjct: 186 MT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 70 ENVIGKGCSGVVYK-AEMPNGELIAVKKLWKT------KRDEEPVDSFAAEIQILGHIR- 121
++VIG+G S VV + G AVK + T ++ EE ++ E IL +
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H +I+ L+ + S L+++ + + I + +++LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG--K 239
+ I+HRD+K NILLD + L+DFG + + + + G+ GY+AP K
Sbjct: 219 N---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILK 272
Query: 240 CKLQIIY-GYTMNITEKSDVYSYGVVLLEILSG 271
C + + GY + D+++ GV+L +L+G
Sbjct: 273 CSMDETHPGYGKEV----DLWACGVILFTLLAG 301
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AV+ + KT+ + + E++I+ + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + GS Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 50/302 (16%)
Query: 73 IGKGCSGVVYKAE----MPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G V+ AE +P + L+AVK L + E F E ++L ++H++IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 83
Query: 127 KLLGYCSNKSVKLLLYNYI---------------SXXXXXXXXXXXXXXDWETRYKIAVG 171
+ G C+ L+++ Y+ + +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A G+ YL +HRD+ N L+ + DFG+++ + ST+Y+ R
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++ P I+Y T +SDV+S+GVVL EI + QP W
Sbjct: 201 IRWMPPES----ILY---RKFTTESDVWSFGVVLWEIFT--YGKQP----------WY-- 239
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKS 351
++ + E I + P E+ I C P +R ++K+V A L +
Sbjct: 240 QLSNTEAIDCITQGRELERPRACPPEV---YAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
Query: 352 AP 353
AP
Sbjct: 297 AP 298
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 44/229 (19%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQIL---GHI 120
+K ++VIG+G G V KA + L A+K++ + ++ D FA E+++L GH
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGH- 81
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------- 173
H NI+ LLG C ++ L Y + + + IA +A
Sbjct: 82 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 174 ---------QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA 224
+G+ YL +HR++ NIL+ Y A +ADFGL
Sbjct: 141 LLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGL------------ 185
Query: 225 MSRVAGSYGYIAPGKCKLQIIYGYTMN---ITEKSDVYSYGVVLLEILS 270
SR Y G+ ++ + ++N T SDV+SYGV+L EI+S
Sbjct: 186 -SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 50/302 (16%)
Query: 73 IGKGCSGVVYKAE----MPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G V+ AE +P + L+AVK L + E F E ++L ++H++IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 106
Query: 127 KLLGYCSNKSVKLLLYNYI---------------SXXXXXXXXXXXXXXDWETRYKIAVG 171
+ G C+ L+++ Y+ + +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A G+ YL +HRD+ N L+ + DFG+++ + ST+Y+ R
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++ P I+Y T +SDV+S+GVVL EI + QP W
Sbjct: 224 IRWMPPES----ILY---RKFTTESDVWSFGVVLWEIFT--YGKQP----------WY-- 262
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKS 351
++ + E I + P E+ I C P +R ++K+V A L +
Sbjct: 263 QLSNTEAIDCITQGRELERPRACPPEV---YAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
Query: 352 AP 353
AP
Sbjct: 320 AP 321
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGXLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 338
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
R++ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 391
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 392 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 439
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 440 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 466
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGL + + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 69
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 119
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 120 CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 177 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 61 DNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI 120
D E L+ +IGKG G VY +GE +A++ + + +E+ + +F E+
Sbjct: 29 DIPFEQLEIGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 121 RHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
RH N+V +G C S + ++ D +IA +G+ YL
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 180 HHDCVPAILHRDVKCNNILLDSKYEAYLADFGL---AKLMNSTNYHHAMSRVAGSYGYIA 236
H ILH+D+K N+ D+ + + DFGL + ++ + + G ++A
Sbjct: 147 H---AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202
Query: 237 PGKCKLQIIYGYTMNITEK-------SDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
P +II + + E SDV++ G + E LH EW
Sbjct: 203 P-----EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE---------------LHAREWP 242
Query: 290 KKKMGSFEPAVSILDTKLQGLPDQMVQEML--QTLGIAMFCVNSSPAERPTMKEVVALLM 347
K +PA +I+ G+ + Q + + I +FC ERPT +++ +L
Sbjct: 243 FKT----QPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
Query: 348 EVKSAPEELGKTSQP 362
++ P+ + S P
Sbjct: 299 KL---PKRNRRLSHP 310
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AV+ + KT+ + + E++I+ + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + GS Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M
Sbjct: 154 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXG 204
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 205 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 79
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 187 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 75
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 183 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 217
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G VY+ L +AVK L K D V+ F E ++ I+H N+V+LLG
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWET--RYKIAVGSAQGLAYLHHDCVPAILH 189
C+ + ++ +++ + +A + + YL +H
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 380
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH-HAMSRVAGSYGYIAPGKCKLQIIYGY 248
R++ N L+ + +ADFGL++LM Y HA ++ + AP
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYN----- 433
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQ 308
+ KSDV+++GV+L EI + + P I D + E ++K P +
Sbjct: 434 --KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRMERP---------E 481
Query: 309 GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
G P++ V E+++ C +P++RP+ E+
Sbjct: 482 GCPEK-VYELMRA------CWQWNPSDRPSFAEI 508
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 74
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 182 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 75
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 183 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 78
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 128
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 129 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 186 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 220
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGLA+++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 75
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 183 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV----DSFAAEIQILGHIRHRNIVKL 128
+G+G G V+ AE N K L K ++P F E ++L +++H +IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 129 LGYCSNKSVKLLLYNY-----ISXXXXXXXXXXXXXXDWETR-----------YKIAVGS 172
G C + ++++ Y ++ D + R IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+ YL +HRD+ N L+ + + DFG+++ + ST+Y+
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P I+Y T +SDV+S+GV+L EI +
Sbjct: 200 RWMPPE----SIMY---RKFTTESDVWSFGVILWEIFT 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 82
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 132
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 133 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 190 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 67 LKDENVIGKGCSGVV----YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRH 122
+K E VIG G G V KA +A+K L K E F +E I+G H
Sbjct: 18 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEH 76
Query: 123 RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY-LHH 181
NI++L G +N ++L ++ D + VG +G+A + +
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN---DGQFTVIQLVGMLRGIASGMRY 133
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS---YGYIAPG 238
+ +HRD+ NIL++S ++DFGL++ + + + G + AP
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ T SD +SYG+V+ E++S
Sbjct: 194 AIAFR-------KFTSASDAWSYGIVMWEVMS 218
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 97
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 147
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 148 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 205 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + D+GLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AVK + KT+ + + E++I+ + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + G+ Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGL++++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 175 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 66
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 116
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 117 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 174 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 208
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+L TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 7 QELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 127 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 178 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 175 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 175 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 175 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 125 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 184 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 236
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 237 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G V+KA+ E++A+K++ DE S EI +L ++H+NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+ L++ + D E +GL + H +LHRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 192 VKCNNILLDSKYEAYLADFGLAK 214
+K N+L++ E LA+FGLA+
Sbjct: 127 LKPQNLLINRNGELKLANFGLAR 149
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 50/290 (17%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVD---SFAAEIQILGHIRHRNIVKL 128
IG+G G V+ + + L+AVK + R+ P D F E +IL H NIV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 129 LGYCSNKSVKLLLYNYIS-XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+G C+ K ++ + +T ++ +A G+ YL C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG-------YIAPGKC 240
+HRD+ N L+ K ++DFG+++ A A S G + AP
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVXAASGGLRQVPVKWTAPEA- 286
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAV 300
+ YG + +SDV+S+G++L E S ++ P + + E+V+K G P
Sbjct: 287 ---LNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQ-QTREFVEK--GGRLPCP 337
Query: 301 SILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVK 350
+ PD + + M Q C P +RP+ + L ++
Sbjct: 338 EL-------CPDAVFRLMEQ-------CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 LKDENV-----IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR 121
LKD++ +G G GVV+K L+ +KL + + E+Q+L
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 122 HRNIVKLLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
IV G + S+ + + + ++ + K+++ +GL YL
Sbjct: 90 SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAMSRVAGSYGYIAPGK 239
I+HRDVK +NIL++S+ E L DFG++ +L++S + G+ Y++P +
Sbjct: 149 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 201
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+ + + +SD++S G+ L+E+ GR + P
Sbjct: 202 LQ-------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGE-------LIAVKKLWKTKRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE ++ +++ K ++E +D E ++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD----EAYVMA 106
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 156
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 157 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 214 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 248
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 34/275 (12%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSN---KSVKLLLYNY 144
GE++AVK L K + + EI+IL + H +IVK G C + KSV+L++ Y
Sbjct: 37 TGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVM-EY 94
Query: 145 ISXXXXXXXXXXXXXXDWETRYKIAVGS--------AQGLAYLHHDCVPAILHRDVKCNN 196
+ D+ R+ + + +G+AYLH +HR + N
Sbjct: 95 VPLGSLR---------DYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARN 142
Query: 197 ILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKS 256
+LLD+ + DFGLAK + + ++ + S + +C + + Y S
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYA------S 196
Query: 257 DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQ 316
DV+S+GV L E+L+ + Q ++ + +M + + PD+
Sbjct: 197 DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPC 256
Query: 317 EMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKS 351
E+ + C + + RPT + +V +L +
Sbjct: 257 EIYH---LMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 34/275 (12%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSN---KSVKLLLYNY 144
GE++AVK L K + + EI+IL + H +IVK G C + KSV+L++ Y
Sbjct: 36 TGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVM-EY 93
Query: 145 ISXXXXXXXXXXXXXXDWETRYKIAVGS--------AQGLAYLHHDCVPAILHRDVKCNN 196
+ D+ R+ + + +G+AYLH +HR + N
Sbjct: 94 VPLGSLR---------DYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARN 141
Query: 197 ILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKS 256
+LLD+ + DFGLAK + + ++ + S + +C + + Y S
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYA------S 195
Query: 257 DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQ 316
DV+S+GV L E+L+ + Q ++ + +M + + PD+
Sbjct: 196 DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPC 255
Query: 317 EMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKS 351
E+ + C + + RPT + +V +L +
Sbjct: 256 EIYH---LMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G V A + +GE +A+KKL + + E E+ +L H++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 132 CSNKSVKLLLYNY---ISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+ S Y++ + E + +GL Y+H ++
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVV 166
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+ ++ E + DFGLA+ ++ + ++R Y AP ++I +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAP-----EVILSW 216
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
M+ + D++S G ++ E+L+G++
Sbjct: 217 -MHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DF LA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
+ IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFI 102
Query: 130 GYCSNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 103 A-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 185 ----PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPG 238
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 222 VLDDSINMKHFESF-KRADIYAMGLVFWEI 250
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 74
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 182 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGL++++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 68 KDENVIGKGCSG-VVYKAEMPNGELIAVKKLWKTK-RDEEPVDSFAAEIQILGHIRHRNI 125
K + V+GKG G V+ + G+ AVK + K + + + +S E+Q+L + H NI
Sbjct: 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
KL + +K L+ + +I G+ Y H +
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN--- 145
Query: 186 AILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I+HRD+K N+LL+SK + + DFGL+ ++ ++ +Y YIAP
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXKDKIGTAY-YIAP----- 197
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++++G EK DV+S GV+L +LSG
Sbjct: 198 EVLHG---TYDEKCDVWSTGVILYILLSG 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G G V A + +GE +A+KKL + + E E+ +L H++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 132 CSNKSVKLLLYNY---ISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+ S Y++ + E + +GL Y+H ++
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVV 148
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+ ++ E + DFGLA+ ++ + ++R Y AP ++I +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAP-----EVILSW 198
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
M+ + D++S G ++ E+L+G++
Sbjct: 199 -MHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 74
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 182 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+ G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 79
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 187 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 76
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L++ D+ +K +GS
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM----------QLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 184 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 38/225 (16%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR-HRNIVKLLG 130
+GKG G+V+K+ + GE++AVKK++ ++ EI IL + H NIV LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 131 --YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--IAVGSAQGLAYLHHDCVPA 186
N L+++Y+ E +K + + + YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANIL----EPVHKQYVVYQLIKVIKYLHSG---G 129
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLM----------------NSTNYHHA---MSR 227
+LHRD+K +NILL+++ +ADFGL++ N+ N+ ++
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+ Y AP +I+ G T T+ D++S G +L EIL G+
Sbjct: 190 YVATRWYRAP-----EILLGST-KYTKGIDMWSLGCILGEILCGK 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGL +++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFIA-A 91
Query: 133 SNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV---- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 185 -PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 211
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 212 DSINMKHFESF-KRADIYAMGLVFWEI 237
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 66 CLKDENVIGKG-----CSGVVY---KAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQIL 117
C+ E VIG G CSG + K E+P +A+K L K E+ F E I+
Sbjct: 23 CITIERVIGAGEFGEVCSGRLKLPGKRELP----VAIKTL-KVGYTEKQRRDFLGEASIM 77
Query: 118 GHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL- 176
G H NI+ L G + +++ Y+ D + VG +G+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN---DGQFTVIQLVGMLRGIS 134
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG-SYGYI 235
A + + +HRD+ NIL++S ++DFGL++++ +R +
Sbjct: 135 AGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP + T SDV+SYG+V+ E++S
Sbjct: 195 APEAIAFR-------KFTSASDVWSYGIVMWEVVS 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 27/244 (11%)
Query: 39 PGAEDFSYPWTFIPFQKL--NFTIDNILECLKDENVIGKG-----CSGVVYKAEMPNGEL 91
PG + + P T+ + F + C+K E VIG G CSG + ++P
Sbjct: 15 PGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSG---RLKLPGKRD 71
Query: 92 IAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXX 150
+AV K K E+ F E I+G H N+V L G + +++ ++
Sbjct: 72 VAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 151 XXXXXXXXXXDWETRYKIAVGSAQGLAY-LHHDCVPAILHRDVKCNNILLDSKYEAYLAD 209
D + VG +G+A + + +HRD+ NIL++S ++D
Sbjct: 132 DAFLRKH---DGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 210 FGLAKLMNSTNYHHAMSRVAGS---YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLL 266
FGL++++ A+ G + AP + + T SDV+SYG+V+
Sbjct: 189 FGLSRVIEDDP--EAVYTTTGGKIPVRWTAPEAIQYR-------KFTSASDVWSYGIVMW 239
Query: 267 EILS 270
E++S
Sbjct: 240 EVMS 243
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 58/311 (18%)
Query: 52 PFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFA 111
P++K + I E LK E +G G G V+ A +AVK + K V++F
Sbjct: 171 PWEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFL 225
Query: 112 AEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI--- 168
AE ++ ++H +VKL + + + + I+ D ++ +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVTKEPIYI-----ITEFMAKGSLLDFLKSDEGSKQPLPKL 280
Query: 169 ---AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ A+G+A++ +HRD++ NIL+ + +ADFGLA
Sbjct: 281 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA------------ 325
Query: 226 SRVAGSY--GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
RV + + AP I +G + T KSDV+S+G++L+EI++ P + +
Sbjct: 326 -RVGAKFPIKWTAPEA----INFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP- 376
Query: 284 HIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
++ +++ P + P+++ I M C + P ERPT + +
Sbjct: 377 EVIRALERGYRMPRP---------ENCPEEL-------YNIMMRCWKNRPEERPTFEYIQ 420
Query: 344 ALLMEVKSAPE 354
++L + +A E
Sbjct: 421 SVLDDFYTATE 431
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFIA-A 65
Query: 133 SNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV---- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 185 -PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 186 DSINMKHFESF-KRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFIA-A 68
Query: 133 SNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV---- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 185 -PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 188
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 189 DSINMKHFESF-KRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFIA-A 71
Query: 133 SNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV---- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 185 -PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 191
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 192 DSINMKHFESF-KRADIYAMGLVFWEI 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + FGLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
IGKG G V++ + GE +AVK + R+E AEI +RH NI+ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFR-EAEIYQTVMLRHENILGFIA-A 66
Query: 133 SNKS----VKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV---- 184
NK +L L + E K+A+ +A GLA+LH + V
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 185 -PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST--NYHHAMSRVAGSYGYIAPGKCK 241
PAI HRD+K NIL+ +AD GLA +S A + G+ Y+AP
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 186
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
I + + +++D+Y+ G+V EI
Sbjct: 187 DSINMKHFESF-KRADIYAMGLVFWEI 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G +A+K + KT+ + + E++I+ + H NIVKL
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + ++++ V + Q Y H I
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQ---KRI 132
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + GS Y AP ++ G
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAP-----ELFQG 184
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 185 KKYDGPE-VDVWSLGVILYTLVSG 207
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 79
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 187 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G+ +AVK + KT+ + + E++I + H NIVKL
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + +++ V + Q Y H I
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + + + G+ Y AP ++ G
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAP-----ELFQG 186
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 187 KKYDGPE-VDVWSLGVILYTLVSG 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 140/352 (39%), Gaps = 78/352 (22%)
Query: 28 VEKASGMST--LPPGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAE 85
VE+ +G + + P + + W F P +L+F +G G G V +A
Sbjct: 12 VEEINGNNXVXIDPTQLPYDHKWEF-PRNRLSFG-----------KTLGAGAFGKVVEAT 59
Query: 86 M-----PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKL 139
+ + K+ K ++ +E+++L ++ H NIV LLG C+ L
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 119
Query: 140 LLYNYI------------------SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL-H 180
++ Y S D E + A+G+A+L
Sbjct: 120 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 179
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGK 239
+C+ HRD+ NILL + DFGLA+ + N +N Y+ G
Sbjct: 180 KNCI----HRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGN 222
Query: 240 CKLQIIYGYTMNI-----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
+L + + +I T +SDV+SYG+ L E+ S S+ P + + +K+
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 282
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
P + P +M ++++T C ++ P +RPT K++V L+
Sbjct: 283 MLSP---------EHAPAEMY-DIMKT------CWDADPLKRPTFKQIVQLI 318
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + D GLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 19/206 (9%)
Query: 70 ENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+ IGKG V A + G +AVK + KT+ + + E++I+ + H NIVKL
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 129 LGYCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
+ L+ Y S + +++ V + Q Y H
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKY-- 134
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
I+HRD+K N+LLD +ADFG + N + + GS Y AP ++
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAP-----ELF 185
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSG 271
G + E DV+S GV+L ++SG
Sbjct: 186 QGKKYDGPE-VDVWSLGVILYTLVSG 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 74
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 182 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+ G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 79
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 187 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + D GLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+ G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFGLAKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELI----AVKKLWKT---KRDEEPVDSFAAEIQILG 118
K V+G G G VYK +P GE + A+K+L + K ++E +D E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 72
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS------ 172
+ + ++ +LLG C +V+L+ D+ +K +GS
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----------TQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 173 ----AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--TNYHHAMS 226
A+G+ YL ++HRD+ N+L+ + + DFG AKL+ + YH
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+V + + + L IY T +SDV+SYGV + E+++
Sbjct: 180 KVPIKWMAL---ESILHRIY------THQSDVWSYGVTVWELMT 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 76/339 (22%)
Query: 39 PGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-----PNGELIA 93
P + + W F P +L+F +G G G V +A + +
Sbjct: 9 PTQLPYDHKWEF-PRNRLSFG-----------KTLGAGAFGKVVEATAYGLIKSDAAMTV 56
Query: 94 VKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI------- 145
K+ K ++ +E+++L ++ H NIV LLG C+ L++ Y
Sbjct: 57 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 116
Query: 146 -----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL-HHDCVPAILHRDVK 193
S D E + A+G+A+L +C+ HRD+
Sbjct: 117 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI----HRDLA 172
Query: 194 CNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI 252
NILL + DFGLA+ + N +N Y+ G +L + + +I
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNARLPVKWMAPESI 219
Query: 253 -----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
T +SDV+SYG+ L E+ S S+ P + + +K+ P
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP--------- 270
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ P +M ++++T C ++ P +RPT K++V L+
Sbjct: 271 EHAPAEMY-DIMKT------CWDADPLKRPTFKQIVQLI 302
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 36/235 (15%)
Query: 60 IDNILECLKDENVI-----GKGCSGVVYKAEMPN------GELIAVKKLWKTKRDEEPVD 108
+D ++ +K N++ G+G G V+ AE N L+AVK L K D D
Sbjct: 3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL-KDASDNARKD 61
Query: 109 SFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXX----------- 157
F E ++L +++H +IVK G C ++++ Y+
Sbjct: 62 -FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 158 --XXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKL 215
IA A G+ YL +HRD+ N L+ + DFG+++
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 216 MNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ ST+Y+ ++ P I+Y T +SDV+S GVVL EI +
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPES----IMY---RKFTTESDVWSLGVVLWEIFT 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 53/296 (17%)
Query: 73 IGKGCSGVVYKAEM-------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI-RHRN 124
+G+G G V AE PN K+ K+ E+ + +E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK----------------I 168
I+ LLG C+ ++ Y S E +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 169 AVGSAQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
A A+G+ YL C+ HRD+ N+L+ +ADFGLA+ ++ + +
Sbjct: 156 AYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVE 287
++AP + IY T +SDV+S+GV+L EI + + P G+ + E
Sbjct: 212 GRLPVKWMAP-EALFDRIY------THQSDVWSFGVLLWEIFTLGGSPYP----GVPVEE 260
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
K + + P E+ + C ++ P++RPT K++V
Sbjct: 261 LFK----------LLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLV 303
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 76/339 (22%)
Query: 39 PGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-----PNGELIA 93
P + + W F P +L+F +G G G V +A + +
Sbjct: 32 PTQLPYDHKWEF-PRNRLSFG-----------KTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 94 VKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI------- 145
K+ K ++ +E+++L ++ H NIV LLG C+ L++ Y
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 146 -----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL-HHDCVPAILHRDVK 193
S D E + A+G+A+L +C+ HRD+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI----HRDLA 195
Query: 194 CNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI 252
NILL + DFGLA+ + N +N Y+ G +L + + +I
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSN-------------YVVKGNARLPVKWMAPESI 242
Query: 253 -----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
T +SDV+SYG+ L E+ S S+ P + + +K+ P
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP--------- 293
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ P +M ++++T C ++ P +RPT K++V L+
Sbjct: 294 EHAPAEMY-DIMKT------CWDADPLKRPTFKQIVQLI 325
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 76/339 (22%)
Query: 39 PGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-----PNGELIA 93
P + + W F P +L+F +G G G V +A + +
Sbjct: 32 PTQLPYDHKWEF-PRNRLSFG-----------KTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 94 VKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI------- 145
K+ K ++ +E+++L ++ H NIV LLG C+ L++ Y
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 146 -----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL-HHDCVPAILHRDVK 193
S D E + A+G+A+L +C+ HRD+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI----HRDLA 195
Query: 194 CNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI 252
NILL + DFGLA+ + N +N Y+ G +L + + +I
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNARLPVKWMAPESI 242
Query: 253 -----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
T +SDV+SYG+ L E+ S S+ P + + +K+ P
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP--------- 293
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ P +M ++++T C ++ P +RPT K++V L+
Sbjct: 294 EHAPAEMY-DIMKT------CWDADPLKRPTFKQIVQLI 325
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E ++ + +G G G V A + G +AVKKL + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 113 EIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + +S++ + L ++ D ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + D GLA+ + M+
Sbjct: 131 I-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMTG 181
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ + D++S G ++ E+L+GR+
Sbjct: 182 YVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 133/339 (39%), Gaps = 76/339 (22%)
Query: 39 PGAEDFSYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSGVVYKAEM-----PNGELIA 93
P + + W F P +L+F +G G G V +A + +
Sbjct: 27 PTQLPYDHKWEF-PRNRLSFG-----------KTLGAGAFGKVVEATAYGLIKSDAAMTV 74
Query: 94 VKKLWKTKRDEEPVDSFAAEIQILGHI-RHRNIVKLLGYCSNKSVKLLLYNYI------- 145
K+ K ++ +E+++L ++ H NIV LLG C+ L++ Y
Sbjct: 75 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 134
Query: 146 -----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL-HHDCVPAILHRDVK 193
S D E + A+G+A+L +C+ HRD+
Sbjct: 135 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI----HRDLA 190
Query: 194 CNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNI 252
NILL + DFGLA+ + N +N Y+ G +L + + +I
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNARLPVKWMAPESI 237
Query: 253 -----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKL 307
T +SDV+SYG+ L E+ S S+ P + + +K+ P
Sbjct: 238 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP--------- 288
Query: 308 QGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ P +M ++++T C ++ P +RPT K++V L+
Sbjct: 289 EHAPAEMY-DIMKT------CWDADPLKRPTFKQIVQLI 320
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 173 AQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 203 AKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E +
Sbjct: 259 LKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCR 307
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 308 RLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q+LN TI + E + + +G G G V + ++ +G IAVKKL + +
Sbjct: 40 QELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR 99
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSV-----KLLLYNYISXXXXXXXXXXXXXXDWETRYK 167
E+++L H++H N++ LL + + + L ++ D ++
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M+
Sbjct: 160 I-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTG 210
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ Y AP +I+ + M+ D++S G ++ E+L+GR+
Sbjct: 211 YVATRWYRAP-----EIMLNW-MHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG--YCSNKSVKLLLYNYI 145
G L+AVK+L + D++ F EIQIL + IVK G Y + L+ Y+
Sbjct: 39 TGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 146 SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC-------VPAILHRDVKCNNIL 198
D+ R++ + +++ L Y C +HRD+ NIL
Sbjct: 97 PSGCLR---------DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 199 LDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSD 257
++S+ +ADFGLAKL+ +Y+ + AP I + +SD
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-------FSRQSD 200
Query: 258 VYSYGVVLLEILS 270
V+S+GVVL E+ +
Sbjct: 201 VWSFGVVLYELFT 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 66 CLKDENVIGKG-----CSGVVYKAEMPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQILG 118
C+K E VIG G CSG + ++P +A+K L D++ D F +E I+G
Sbjct: 15 CIKIEKVIGVGEFGEVCSG---RLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMG 70
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------VGS 172
H NI+ L G + +++ Y+ + R+ + G
Sbjct: 71 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGI 125
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
G+ YL + +HRD+ NIL++S ++DFG+++++ +R
Sbjct: 126 GSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----- 177
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+V+ E++S
Sbjct: 178 GGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMS 214
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 173 AQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 210 AKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E +
Sbjct: 266 LKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCR 314
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 315 RLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 66 CLKDENVIGKG-----CSGVVYKAEMPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQILG 118
C+K E VIG G CSG + ++P +A+K L D++ D F +E I+G
Sbjct: 9 CIKIEKVIGVGEFGEVCSG---RLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMG 64
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------VGS 172
H NI+ L G + +++ Y+ + R+ + G
Sbjct: 65 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGI 119
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
G+ YL + +HRD+ NIL++S ++DFG+++++ +R
Sbjct: 120 GSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----- 171
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+V+ E++S
Sbjct: 172 GGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMS 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 173 AQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 208 AKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E +
Sbjct: 264 LKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCR 312
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 313 RLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 173 AQGLAYL-HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A+G+ +L C+ HRD+ NILL K + DFGLA+ + +
Sbjct: 201 AKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
++AP + I+ I +SDV+S+GV+L EI S ++ P G+ I E +
Sbjct: 257 LKWMAP-----ETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCR 305
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ T+++ PD EM QT+ + C + P++RPT E+V L
Sbjct: 306 RLKE--------GTRMRA-PDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P T+ P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGL++++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG + P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + +++ Y+
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 147 XXXXXXXXXXXXXXDWETRYKIA------VGSAQGLAYLHHDCVPAILHRDVKCNNILLD 200
+ ++ + G A G+ YL +HRD+ NIL++
Sbjct: 130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILIN 181
Query: 201 SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
S ++DFGL++++ +R G P + Y T SDV+S
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWS 235
Query: 261 YGVVLLEILS 270
YG+VL E++S
Sbjct: 236 YGIVLWEVMS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 39 PGAEDFSYPWTF-IPFQKL----------NFTIDNILECLKDENVIGKGCSGVVYKAEMP 87
PG F P TF P Q + N +ID ++ + G+ CSG + ++P
Sbjct: 17 PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGE----FGEVCSG---RLKLP 69
Query: 88 NGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYIS 146
+ + I+V K K E+ F E I+G H NI++L G + KS +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEXM 128
Query: 147 XXXXXXXXXXXXXXDWETRYKIAV--GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYE 204
+ + + G A G+ YL +HRD+ NIL++S
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLV 185
Query: 205 AYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVV 264
++DFGL++++ +R G P + Y T SDV+SYG+V
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR-----GGKIPIRWTSPEAIAY-RKFTSASDVWSYGIV 239
Query: 265 LLEILS 270
L E++S
Sbjct: 240 LWEVMS 245
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG--YCSNKSVKLLLYNYI 145
G L+AVK+L + D++ F EIQIL + IVK G Y + L+ Y+
Sbjct: 51 TGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 146 SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC-------VPAILHRDVKCNNIL 198
D+ R++ + +++ L Y C +HRD+ NIL
Sbjct: 109 PSGCLR---------DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 199 LDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSD 257
++S+ +ADFGLAKL+ +Y+ + AP I + +SD
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-------FSRQSD 212
Query: 258 VYSYGVVLLEILS 270
V+S+GVVL E+ +
Sbjct: 213 VWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG--YCSNKSVKLLLYNYI 145
G L+AVK+L + D++ F EIQIL + IVK G Y + L+ Y+
Sbjct: 38 TGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 146 SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC-------VPAILHRDVKCNNIL 198
D+ R++ + +++ L Y C +HRD+ NIL
Sbjct: 96 PSGCLR---------DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 199 LDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSD 257
++S+ +ADFGLAKL+ +Y+ + AP I + +SD
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-------FSRQSD 199
Query: 258 VYSYGVVLLEILS 270
V+S+GVVL E+ +
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 64 LECLKDENVIGKG-----CSGVVYKAEMPNGE--LIAVKKLWKTKRDEEPVDSFAAEIQI 116
+ C+K E VIG G CSG + ++P +A+K L K+ E+ F +E I
Sbjct: 6 ISCVKIEQVIGAGEFGEVCSGHL---KLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASI 61
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+G H N++ L G + + +++ ++ D + VG +G+
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN---DGQFTVIQLVGMLRGI 118
Query: 177 AY-LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS---Y 232
A + + +HR + NIL++S ++DFGL++ + + G
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ AP + + T SDV+SYG+V+ E++S
Sbjct: 179 RWTAPEAIQYR-------KFTSASDVWSYGIVMWEVMS 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G G V+ E + L V K R + P++ AEI++L + H NI+K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 133 SNKSVKLLLYN-YISXXXXXXXXXXXXXXDWETRYK---------IAVGSAQGLAYLHHD 182
+ +N YI + R K + LAY H
Sbjct: 90 ED------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 183 CVPAILHRDVKCNNILL-DSKYEA--YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
V +H+D+K NIL D+ + + DFGLA+L S + + AG+ Y+AP
Sbjct: 144 HV---VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEV 197
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
K ++T K D++S GVV+ +L+G P G L E V++K EP
Sbjct: 198 FK--------RDVTFKCDIWSAGVVMYFLLTG---CLPFTGTSL---EEVQQKATYKEPN 243
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
++ + + L Q V + Q L P RP+ +V+
Sbjct: 244 YAV---ECRPLTPQAVDLLKQML-------TKDPERRPSAAQVL 277
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 34 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------ 169
I+G H NI++L G + +++ Y+ + ++ +
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGML 141
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
G A G+ YL +HRD+ NIL++S ++DFGL++++ +R
Sbjct: 142 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-- 196
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+VL E++S
Sbjct: 197 ---GGKIPIRWTSPEAIAYR-KFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 17 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------ 169
I+G H NI++L G + +++ Y+ + ++ +
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGML 124
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
G A G+ YL +HRD+ NIL++S ++DFGL++++ +R
Sbjct: 125 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-- 179
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+VL E++S
Sbjct: 180 ---GGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IGKG V A + G +A+K + KT+ + + E++I+ + H NIVKL
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 131 YCSNKSVKLLLYNYIS---XXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
+ L+ Y S + ++++ V + Q Y H I
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQ---KRI 135
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K N+LLD+ +ADFG + N + G+ Y AP ++ G
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCGAPPYAAP-----ELFQG 187
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ E DV+S GV+L ++SG
Sbjct: 188 KKYDGPE-VDVWSLGVILYTLVSG 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDS----FAAEIQILGHIRHRNIVK 127
+G+G G VYKA G+++A+K++ PV+S EI I+ ++VK
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV--------PVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 128 LLG-YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
G Y N + +++ + + I + +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+HRD+K NILL+++ A LADFG+A + T+ + V G+ ++AP ++I
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAP-----EVIQ 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
N +D++S G+ +E+ G+
Sbjct: 199 EIGYNCV--ADIWSLGITAIEMAEGK 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 72 VIGKGCSGVVYKAEMPN--GELIAVKKLWKTKRDEEPVDS---FAAEIQILGHIRHRNIV 126
++G+G G VY+ N GE I V KT + + +D+ F +E I+ ++ H +IV
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAV--KTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH-DCVP 185
KL+G + +++ Y T ++ + +AYL +CV
Sbjct: 77 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV- 135
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
HRD+ NIL+ S L DFGL++ + +Y+ A S +++P +
Sbjct: 136 ---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFR-- 189
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDT 305
T SDV+ + V + EILS QP W++ K + +L+
Sbjct: 190 -----RFTTASDVWMFAVCMWEILS--FGKQPFF--------WLENK-----DVIGVLEK 229
Query: 306 KLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+ + +L TL C + P++RP E+V L +V
Sbjct: 230 GDRLPKPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSLSDV 271
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T+Y+ + ++A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 201 PESLKDGV-------FTTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 239
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 37/285 (12%)
Query: 71 NVIGKGCSGVVYKAEMPN--GELIAVKKLWKTKRDEEPVDS---FAAEIQILGHIRHRNI 125
++G+G G VY+ N GE I V KT + + +D+ F +E I+ ++ H +I
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAV--KTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH-DCV 184
VKL+G + +++ Y T ++ + +AYL +CV
Sbjct: 88 VKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
HRD+ NIL+ S L DFGL++ + +Y+ A S +++P +
Sbjct: 148 ----HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFR- 201
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILD 304
T SDV+ + V + EILS QP W++ K + +L+
Sbjct: 202 ------RFTTASDVWMFAVCMWEILS--FGKQPFF--------WLENK-----DVIGVLE 240
Query: 305 TKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+ + +L TL C + P++RP E+V L +V
Sbjct: 241 KGDRLPKPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSLSDV 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 72 VIGKGCSGVVYKAEMPN--GELIAVKKLWKTKRDEEPVDS---FAAEIQILGHIRHRNIV 126
++G+G G VY+ N GE I V KT + + +D+ F +E I+ ++ H +IV
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAV--KTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH-DCVP 185
KL+G + +++ Y T ++ + +AYL +CV
Sbjct: 73 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV- 131
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
HRD+ NIL+ S L DFGL++ + +Y+ A S +++P +
Sbjct: 132 ---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFR-- 185
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDT 305
T SDV+ + V + EILS QP W++ K + +L+
Sbjct: 186 -----RFTTASDVWMFAVCMWEILS--FGKQPFF--------WLENK-----DVIGVLEK 225
Query: 306 KLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+ + +L TL C + P++RP E+V L +V
Sbjct: 226 GDRLPKPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSLSDV 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 44 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------ 169
I+G H NI++L G + +++ Y+ + ++ +
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGML 151
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
G A G+ YL +HRD+ NIL++S ++DFGL++++ +R
Sbjct: 152 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-- 206
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+VL E++S
Sbjct: 207 ---GGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 46 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA------ 169
I+G H NI++L G + +++ Y+ + ++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGML 153
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA 229
G A G+ YL +HRD+ NIL++S ++DFGL++++ +R
Sbjct: 154 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-- 208
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
G P + Y T SDV+SYG+VL E++S
Sbjct: 209 ---GGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSF 110
Q+LN T+ + + L+ +G G G V Y A + + +AVKKL + +
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 111 AAEIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETR 165
E+++L H++H N++ LL + S++ + L + D +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ 134
Query: 166 YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ + +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M
Sbjct: 135 F-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----M 185
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ + Y AP +I+ + M+ + D++S G ++ E+L G++
Sbjct: 186 TGYVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 37/266 (13%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL- 128
IG G GVV A G+ +A+KK+ E++IL H +H NI+ +
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 129 ------LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+ Y KSV ++L + + RY + +GL Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVL-DLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMHSA 178
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA--MSRVAGSYGYIAPGKC 240
V +HRD+K +N+L++ E + DFG+A+ + ++ H M+ + Y AP
Sbjct: 179 QV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP--- 232
Query: 241 KLQI-IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDG---LHIVEWVKKKMGSF 296
+L + ++ YT I D++S G + E+L+ R Q+ G +H ++ + +G+
Sbjct: 233 ELMLSLHEYTQAI----DLWSVGCIFGEMLARR-----QLFPGKNYVHQLQLIMMVLGTP 283
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTL 322
PAV +Q + + V+ +Q+L
Sbjct: 284 SPAV------IQAVGAERVRAYIQSL 303
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG- 130
IG G G+V A + G +AVKKL + +++ E+ +L + H+NI+ LL
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 131 YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+ K+++ +Y + D E + G+ +LH I+
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGII 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K +NI++ S + DFGLA+ STN+ M+ + Y AP ++I G
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLAR-TASTNF--MMTPYVVTRYYRAP-----EVILG- 197
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK 290
M E D++S G ++ E++ G Q HI +W K
Sbjct: 198 -MGYKENVDIWSVGCIMGELVKGSVIFQ----GTDHIDQWNK 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 38/277 (13%)
Query: 64 LECLKDENVIGKGCSGVVY---KAEMPN-GELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
E LK V+G+G G V+ K P+ G L A+K L K E IL
Sbjct: 30 FELLK---VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD 86
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
+ H +VKL + L+ +++ E A GL +L
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 180 HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H I++RD+K NILLD + L DFGL+K + ++ G+ Y+AP
Sbjct: 147 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEV 201
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
Q G++ + +D +SYGV++ E+L+G Q + E
Sbjct: 202 VNRQ---GHSHS----ADWWSYGVLMFEMLTGSLPFQGK---------------DRKETM 239
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAER 336
IL KL G+P Q + Q+L A+F N PA R
Sbjct: 240 TLILKAKL-GMP-QFLSTEAQSLLRALFKRN--PANR 272
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 82
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T+Y+ + ++A
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 200 PESLKDGV-------FTTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 238
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 239 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 285
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 37/266 (13%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL- 128
IG G GVV A G+ +A+KK+ E++IL H +H NI+ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 129 ------LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+ Y KSV ++L + + RY + +GL Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVL-DLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMHSA 177
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA--MSRVAGSYGYIAPGKC 240
V +HRD+K +N+L++ E + DFG+A+ + ++ H M+ + Y AP
Sbjct: 178 QV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP--- 231
Query: 241 KLQI-IYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDG---LHIVEWVKKKMGSF 296
+L + ++ YT I D++S G + E+L+ R Q+ G +H ++ + +G+
Sbjct: 232 ELMLSLHEYTQAI----DLWSVGCIFGEMLARR-----QLFPGKNYVHQLQLIMMVLGTP 282
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTL 322
PAV +Q + + V+ +Q+L
Sbjct: 283 SPAV------IQAVGAERVRAYIQSL 302
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSY 232
Q L + H + I+HRDVK NIL+ + + DFG+A+ + +S N + V G+
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
Y++P + + ++ +SDVYS G VL E+L+G P GD
Sbjct: 184 QYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGD 222
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSF 110
Q+LN T+ + + L+ +G G G V Y A + + +AVKKL + +
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 111 AAEIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETR 165
E+++L H++H N++ LL + S++ + L + D +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 134
Query: 166 YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ + +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M
Sbjct: 135 F-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----M 185
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ + Y AP +I+ + M+ + D++S G ++ E+L G++
Sbjct: 186 TGYVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 18/210 (8%)
Query: 67 LKDENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDS---FAAEIQILGHIRH 122
L+ V+G G G VYK +P+GE + + K R+ + E ++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 123 RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+ +LLG C +V+L+ + + A+G++YL
Sbjct: 79 PYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED- 137
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLM--NSTNYHHAMSRVAGSYGYIAPGKC 240
++HRD+ N+L+ S + DFGLA+L+ + T YH +V +
Sbjct: 138 --VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW-------M 188
Query: 241 KLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
L+ I T +SDV+SYGV + E+++
Sbjct: 189 ALESI--LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKK-LWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG+G G V+KA G+ +A+KK L + +++ P+ + EI+IL ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 131 YCSNKSVKL--------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
C K+ L++++ ++ GL Y+H +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAK---LMNSTNYHHAMSRVAGSYGYIAPGK 239
ILHRD+K N+L+ LADFGLA+ L ++ + +RV + Y P
Sbjct: 145 ---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPEL 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ YG + D++ G ++ E+ + RS + Q H + + + GS P
Sbjct: 201 LLGERDYGPPI------DLWGAGCIMAEMWT-RSPIM-QGNTEQHQLALISQLCGSITPE 252
Query: 300 V 300
V
Sbjct: 253 V 253
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 55/305 (18%)
Query: 72 VIGKGCSGVVYKAEMPNGE----LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
++G+G G V + + + +AVK + + ++ F +E + H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 128 LLGYCSNKSVKLL--------------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA 173
LLG C S + + L+ Y+ +T K V A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL---LYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
G+ YL + LHRD+ N +L +ADFGL+K + S +Y+ G
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ--------G 206
Query: 234 YIAPGKCKLQIIYGYTMNI-TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
IA K I + T KSDV+++GV + EI + + P G H
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNH-------- 256
Query: 293 MGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMF-CVNSSPAERPTMKEVVALLME--V 349
+ D L G + ++ L L M+ C + P +RPT V+ L +E +
Sbjct: 257 --------EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS-VLRLQLEKLL 307
Query: 350 KSAPE 354
+S P+
Sbjct: 308 ESLPD 312
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSF 110
Q+LN T+ + + L+ +G G G V Y A + + +AVKKL + +
Sbjct: 9 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 66
Query: 111 AAEIQILGHIRHRNIVKLLG-YCSNKSVK----LLLYNYISXXXXXXXXXXXXXXDWETR 165
E+++L H++H N++ LL + S++ + L + D +
Sbjct: 67 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 126
Query: 166 YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+ + +GL Y+H I+HRD+K +N+ ++ E + DFGLA+ + M
Sbjct: 127 F-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----M 177
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
+ + Y AP +I+ + M+ + D++S G ++ E+L G++
Sbjct: 178 TGYVATRWYRAP-----EIMLNW-MHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 56/299 (18%)
Query: 73 IGKGCSGVVYKAEM------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+ G VYK + + +A+K L K K + + F E + ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 127 KLLGYCSNKSVKLLLYNYISX------XXXXXXXXXXXXXDWETRYKIAVGS-------- 172
LLG + ++++Y S D + K A+
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 173 --AQGLAYL--HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A G+ YL HH ++H+D+ N+L+ K ++D GL + + + +Y+ +
Sbjct: 153 QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVE 287
++AP I+YG + SD++SYGVVL E+ S +QP G +VE
Sbjct: 208 LLPIRWMAPEA----IMYG---KFSIDSDIWSYGVVLWEVFS--YGLQPYCGYSNQDVVE 258
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ + ++ PD + + C N P+ RP K++ + L
Sbjct: 259 MIRNR-------------QVLPCPDDCPA---WVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Query: 88 NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG--YCSNKSVKLLLYNYI 145
G L+AVK+L + D++ F EIQIL + IVK G Y + L+ Y+
Sbjct: 35 TGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 146 SXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC-------VPAILHRDVKCNNIL 198
D+ R++ + +++ L Y C +HRD+ NIL
Sbjct: 93 PSGCLR---------DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 199 LDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG--YIAPGKCKLQIIYGYTMNITEKS 256
++S+ +ADFGLAKL+ + + R G + AP I + +S
Sbjct: 144 VESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDNI-------FSRQS 195
Query: 257 DVYSYGVVLLEILS 270
DV+S+GVVL E+ +
Sbjct: 196 DVWSFGVVLYELFT 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 56/299 (18%)
Query: 73 IGKGCSGVVYKAEM------PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+ G VYK + + +A+K L K K + + F E + ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 127 KLLGYCSNKSVKLLLYNYISX------XXXXXXXXXXXXXDWETRYKIAVGS-------- 172
LLG + ++++Y S D + K A+
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 173 --AQGLAYL--HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
A G+ YL HH ++H+D+ N+L+ K ++D GL + + + +Y+ +
Sbjct: 136 QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVE 287
++AP I+YG + SD++SYGVVL E+ S +QP G +VE
Sbjct: 191 LLPIRWMAPEA----IMYG---KFSIDSDIWSYGVVLWEVFS--YGLQPYCGYSNQDVVE 241
Query: 288 WVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
++ + ++ PD + + C N P+ RP K++ + L
Sbjct: 242 MIRNR-------------QVLPCPDDCPA---WVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 72 VIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
++GKG G V K + + AVK + K + + E+++L + H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
+ S ++ + +I G+ Y+H I+HR
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 191 DVKCNNILLDSKY---EAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
D+K NILL+SK + + DFGL+ M G+ YIAP +++ G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAP-----EVLRG 197
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
EK DV+S GV+L +LSG
Sbjct: 198 ---TYDEKCDVWSAGVILYILLSG 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T Y+ + ++A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 201 PESLKDGV-------FTTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 239
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKK-LWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG+G G V+KA G+ +A+KK L + +++ P+ + EI+IL ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 131 YCSNKSVKL--------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
C K+ L++++ ++ GL Y+H +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAK---LMNSTNYHHAMSRVAGSYGYIAPGK 239
ILHRD+K N+L+ LADFGLA+ L ++ + +RV + Y P
Sbjct: 145 ---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPEL 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ YG + D++ G ++ E+ + RS + Q H + + + GS P
Sbjct: 201 LLGERDYGPPI------DLWGAGCIMAEMWT-RSPIM-QGNTEQHQLALISQLCGSITPE 252
Query: 300 V 300
V
Sbjct: 253 V 253
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKK-LWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG+G G V+KA G+ +A+KK L + +++ P+ + EI+IL ++H N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 83
Query: 131 YCSNKSVKL--------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
C K+ L++++ ++ GL Y+H +
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAK 214
ILHRD+K N+L+ LADFGLA+
Sbjct: 144 ---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSY 232
Q L + H + I+HRDVK NI++ + + DFG+A+ + +S N + V G+
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
Y++P + + ++ +SDVYS G VL E+L+G P GD V + +
Sbjct: 184 QYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGDSPDSVAYQHVR 233
Query: 293 MGSFEPA 299
P+
Sbjct: 234 EDPIPPS 240
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKK-LWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG+G G V+KA G+ +A+KK L + +++ P+ + EI+IL ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIE 84
Query: 131 YCSNKSVKL--------LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
C K+ L++++ ++ GL Y+H +
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAK---LMNSTNYHHAMSRVAGSYGYIAPGK 239
ILHRD+K N+L+ LADFGLA+ L ++ + +RV + Y P
Sbjct: 145 ---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPEL 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ YG + D++ G ++ E+ + RS + Q H + + + GS P
Sbjct: 201 LLGERDYGPPI------DLWGAGCIMAEMWT-RSPIM-QGNTEQHQLALISQLCGSITPE 252
Query: 300 V 300
V
Sbjct: 253 V 253
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 72 VIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
++GKG G V K + + AVK + K + + E+++L + H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
+ S ++ + +I G+ Y+H I+HR
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 191 DVKCNNILLDSKY---EAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
D+K NILL+SK + + DFGL+ M G+ YIAP +++ G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAP-----EVLRG 197
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
EK DV+S GV+L +LSG
Sbjct: 198 ---TYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 72 VIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
++GKG G V K + + AVK + K + + E+++L + H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
+ S ++ + +I G+ Y+H I+HR
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 191 DVKCNNILLDSKY---EAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
D+K NILL+SK + + DFGL+ M G+ YIAP +++ G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAP-----EVLRG 197
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
EK DV+S GV+L +LSG
Sbjct: 198 ---TYDEKCDVWSAGVILYILLSG 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 72 VIGKGCSGVVYKAEM-PNGELIAVKKLWKTKRD----EEPVDSFAAEIQILGHIRHRNIV 126
V+GKG G V A + G+L AVK L K+D ++ V+ E +IL R+ +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVL---KKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 127 KLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKI-AVGSAQGLAYLHHDCV 184
L C +L +++ D E R + A L +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-EARARFYAAEIISALMFLHDK-- 143
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAK--LMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
I++RD+K +N+LLD + LADFG+ K + N + G+ YIAP +
Sbjct: 144 -GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV----TTATFCGTPDYIAPEILQ- 197
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
+++YG + D ++ GV+L E+L G + + + D L
Sbjct: 198 EMLYGPAV------DWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSY 232
Q L + H + I+HRDVK NI++ + + DFG+A+ + +S N + V G+
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
Y++P + + ++ +SDVYS G VL E+L+G P GD
Sbjct: 184 QYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSY 232
Q L + H + I+HRDVK NI++ + + DFG+A+ + +S N + V G+
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
Y++P + + ++ +SDVYS G VL E+L+G P GD
Sbjct: 184 QYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGD 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 17 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAV--GSA 173
I+G H NI++L G + KS +++ + + + G A
Sbjct: 70 IMGQFDHPNIIRLEGVVT-KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
G+ YL +HRD+ NIL++S ++DFGL++++ +R G
Sbjct: 129 SGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-----G 180
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
P + Y T SDV+SYG+VL E++S
Sbjct: 181 GKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + +A+KK+ + + EIQIL RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEH-QTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H V L
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANV---L 166
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+L+++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP-----EIMLN 221
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 222 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 262
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAMSRVAGSY 232
Q L + H + I+HRDVK NI++ + + DFG+A+ + +S N + V G+
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
Y++P + + ++ +SDVYS G VL E+L+G P GD
Sbjct: 184 QYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGD 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 130/325 (40%), Gaps = 56/325 (17%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 148
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 203
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGR--------------------SAVQPQIGDGLH 284
GYT +I D++S G +L E+LS R S Q + G++
Sbjct: 204 SKGYTKSI----DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGIN 259
Query: 285 I--------------VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVN 330
+ V W + + A+ +LD L P + + E+ Q L
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI-EVEQALAHPYLAQY 318
Query: 331 SSPAERPTMKEVVALLMEVKSAPEE 355
P++ P + ME+ P+E
Sbjct: 319 YDPSDEPIAEAPFKFDMELDDLPKE 343
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWK---TKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+G+G G V A G+ +A+K + K K D + EI L +RH +I+KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREISYLRLLRHPHIIKL 69
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+K +++ Y + E R + + Y H I+
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIV 125
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD +ADFGL+ +M N+ + GS Y AP ++I G
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP-----EVISG- 176
Query: 249 TMNITEKSDVYSYGVVLLEILSGR 272
+ + DV+S GV+L +L R
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 27/244 (11%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + KS++ +Y + D E + G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMG 294
P ++I G M E D++S GV++ E++ G + P HI +W K +++G
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGVIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLG 242
Query: 295 SFEP 298
+ P
Sbjct: 243 TPSP 246
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 57 NFTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQ 115
N +ID ++ + G+ CSG + ++P+ + I+V K K E+ F E
Sbjct: 46 NISIDKVVGAGE----FGEVCSG---RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAV--GSA 173
I+G H NI++L G + KS +++ + + + G A
Sbjct: 99 IMGQFDHPNIIRLEGVVT-KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
G+ YL +HRD+ NIL++S ++DFGL++++ +R G
Sbjct: 158 SGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-----G 209
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
P + Y T SDV+SYG+VL E++S
Sbjct: 210 GKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 27/244 (11%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + KS++ +Y + D E + G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMG 294
P ++I G M E D++S GV++ E++ G + P HI +W K +++G
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGVIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLG 242
Query: 295 SFEP 298
+ P
Sbjct: 243 TPSP 246
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 84
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HR++ N ++ + + DFG+ + + T+Y+ + ++A
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 202 PESLKDGV-------FTTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 240
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 241 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLL 287
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAM 225
++ + Q L + H + I+HRDVK NI++ + + DFG+A+ + +S N
Sbjct: 137 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ V G+ Y++P + + ++ +SDVYS G VL E+L+G P GD
Sbjct: 194 AAVIGTAQYLSPEQARGD-------SVDARSDVYSLGCVLYEVLTGEP---PFTGD 239
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL--- 129
IGKG G V+ + GE +AVK + T EE EI +RH NI+ +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 130 --GYCSNKSVKLL--------LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
G S + L+ LY+Y+ D ++ K+A S GL +L
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTL----------DAKSMLKLAYSSVSGLCHL 150
Query: 180 HHDCV-----PAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHH--AMSRVAGS 231
H + PAI HRD+K NIL+ +AD GLA K ++ TN +RV G+
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GT 209
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEI 268
Y+ P + + + +D+YS+G++L E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYI-MADMYSFGLILWEV 245
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HR++ N ++ + + DFG+ + + T+Y+ + ++A
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 201 PESLKDGV-------FTTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 239
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 73 IGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G VYK + L+A+K++ + P + E+ +L ++H NIV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHDI 68
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+ L++ Y+ + +GLAY H +LHRD
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRD 125
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K N+L++ + E LADFGLA+ + + V + Y P I+ G T +
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPP-----DILLGST-D 177
Query: 252 ITEKSDVYSYGVVLLEILSGR-----SAVQPQI 279
+ + D++ G + E+ +GR S V+ Q+
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 201
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 202 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 242
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL ++H+ V ++RD+K NILLD ++D GLA + H ++ G++GY
Sbjct: 303 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 355
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
+AP + + Y + +D +S G +L ++L G S + H ++ + M
Sbjct: 356 MAPEVLQKGVAYDSS------ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 295 -----SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAER 336
SF P + L L+GL + V L LG V SP R
Sbjct: 410 VELPDSFSPELRSL---LEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL ++H+ V ++RD+K NILLD ++D GLA + H ++ G++GY
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
+AP + + Y + +D +S G +L ++L G S + H ++ + M
Sbjct: 357 MAPEVLQKGVAYDSS------ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 295 -----SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAER 336
SF P + L L+GL + V L LG V SP R
Sbjct: 411 VELPDSFSPELRSL---LEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL ++H+ V ++RD+K NILLD ++D GLA + H ++ G++GY
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
+AP + + Y + +D +S G +L ++L G S + H ++ + M
Sbjct: 357 MAPEVLQKGVAYDSS------ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 295 -----SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAER 336
SF P + L L+GL + V L LG V SP R
Sbjct: 411 VELPDSFSPELRSL---LEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWK---TKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+G+G G V A G+ +A+K + K K D + EI L +RH +I+KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREISYLRLLRHPHIIKL 79
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+K +++ Y + E R + + Y H I+
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIV 135
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD +ADFGL+ +M N+ + GS Y AP ++I G
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP-----EVISG- 186
Query: 249 TMNITEKSDVYSYGVVLLEILSGR 272
+ + DV+S GV+L +L R
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWK---TKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+G+G G V A G+ +A+K + K K D + EI L +RH +I+KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREISYLRLLRHPHIIKL 73
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+K +++ Y + E R + + Y H I+
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIV 129
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD +ADFGL+ +M N+ + GS Y AP ++I G
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP-----EVISG- 180
Query: 249 TMNITEKSDVYSYGVVLLEILSGR 272
+ + DV+S GV+L +L R
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL ++H+ V ++RD+K NILLD ++D GLA + H ++ G++GY
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGY 356
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
+AP + + Y + +D +S G +L ++L G S + H ++ + M
Sbjct: 357 MAPEVLQKGVAYDSS------ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 295 -----SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAER 336
SF P + L L+GL + V L LG V SP R
Sbjct: 411 VELPDSFSPELRSL---LEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWK---TKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+G+G G V A G+ +A+K + K K D + EI L +RH +I+KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREISYLRLLRHPHIIKL 78
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+K +++ Y + E R + + Y H I+
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIV 134
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K N+LLD +ADFGL+ +M N+ + GS Y AP ++I G
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP-----EVISG- 185
Query: 249 TMNITEKSDVYSYGVVLLEILSGR 272
+ + DV+S GV+L +L R
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
LK IGKG G V + G +AVK + +++ +F AE ++ +RH N+V
Sbjct: 8 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 62
Query: 127 KLLGYCSNKSVKLLL---YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+LLG + L + Y + K ++ + + YL +
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD+ N+L+ A ++DFGL K +ST + + AP + +
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREK 174
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQI 279
+ KSDV+S+G++L EI S P+I
Sbjct: 175 -------KFSTKSDVWSFGILLWEIYSFGRVPYPRI 203
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 201
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 202 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 201
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 202 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 242
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
LK IGKG G V + G +AVK + +++ +F AE ++ +RH N+V
Sbjct: 23 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 127 KLLGYCSNKSVKLLL---YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+LLG + L + Y + K ++ + + YL +
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 136
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD+ N+L+ A ++DFGL K +ST + + AP + +
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREK 189
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQI 279
+ KSDV+S+G++L EI S P+I
Sbjct: 190 -------KFSTKSDVWSFGILLWEIYSFGRVPYPRI 218
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 154
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 209
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 210 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 201
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 202 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 72 VIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRD----EEPVDSFAAEIQILG-HIRHRNI 125
++GKG G V+ AE + A+K L K+D ++ V+ E ++L H +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKAL---KKDVVLMDDDVECTMVEKRVLSLAWEHPFL 81
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
+ K + Y++ D A GL +LH
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---K 138
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
I++RD+K +NILLD +ADFG+ K + + G+ YIAP +I+
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAP-----EIL 191
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQ 278
G N + D +S+GV+L E+L G+S Q
Sbjct: 192 LGQKYNHS--VDWWSFGVLLYEMLIGQSPFHGQ 222
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H V L
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV---L 146
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 201
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 202 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 242
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
LK IGKG G V + G +AVK + +++ +F AE ++ +RH N+V
Sbjct: 195 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 127 KLLGYCSNKSVKLLL---YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+LLG + L + Y + K ++ + + YL +
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 308
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD+ N+L+ A ++DFGL K +ST + + AP + +
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREK 361
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQI 279
+ KSDV+S+G++L EI S P+I
Sbjct: 362 -------KFSTKSDVWSFGILLWEIYSFGRVPYPRI 390
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 148
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 203
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 204 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 244
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 151
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 206
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 207 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 247
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 144
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 199
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 200 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 240
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 152
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 207
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 208 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 143
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 198
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 199 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
LK IGKG G V + G +AVK + +++ +F AE ++ +RH N+V
Sbjct: 14 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 68
Query: 127 KLLGYCSNKSVKLLL---YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
+LLG + L + Y + K ++ + + YL +
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
+HRD+ N+L+ A ++DFGL K +ST + + AP +
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALR-- 178
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQI 279
+ KSDV+S+G++L EI S P+I
Sbjct: 179 -----EAAFSTKSDVWSFGILLWEIYSFGRVPYPRI 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 72 VIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG G G K +G+++ K+L E +E+ +L ++H NIV+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 131 YCSNKSVKLLLY--------NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+++ L + S ++ R + A + D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMN-STNYHHAMSRVAGSYGYIAPGKCK 241
+LHRD+K N+ LD K L DFGLA+++N T++ A G+ Y++P +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF---VGTPYYMSPEQMN 189
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEI 268
M+ EKSD++S G +L E+
Sbjct: 190 -------RMSYNEKSDIWSLGCLLYEL 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 166
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 221
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 222 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 262
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 144
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 199
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 200 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 21/213 (9%)
Query: 72 VIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRD----EEPVDSFAAEIQILG-HIRHRNI 125
++GKG G V+ AE + A+K L K+D ++ V+ E ++L H +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKAL---KKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 126 VKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVP 185
+ K + Y++ D A GL +LH
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---K 137
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
I++RD+K +NILLD +ADFG+ K + + G+ YIAP +I+
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAP-----EIL 190
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQ 278
G N D +S+GV+L E+L G+S Q
Sbjct: 191 LGQKYN--HSVDWWSFGVLLYEMLIGQSPFHGQ 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 72 VIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRH-------- 122
V+G+G G V KA + A+KK+ T EE + + +E+ +L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 123 -----RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-KIAVGSAQGL 176
RN VK + KS + Y Y ++ + L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK---------LMNSTNYHHAMSR 227
+Y+H I+HRD+K NI +D + DFGLAK ++S N +
Sbjct: 130 SYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 228 VAGSYG---YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+ + G Y+A +++ G T + EK D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVAT-----EVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 30/170 (17%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL + + LADFG+A + T + G+
Sbjct: 127 KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPF 181
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKM 293
++AP K Q Y + K+D++S G+ +E+ G +P D LH + +
Sbjct: 182 WMAPEVIK-QSAYDF------KADIWSLGITAIELAKG----EPPNSD-LHPMRVLFLIP 229
Query: 294 GSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+ P L+G + +E ++ C+N P RPT KE++
Sbjct: 230 KNSPPT-------LEGQHSKPFKEFVEA------CLNKDPRFRPTAKELL 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 61 DNILECLKDENVIGKG-CSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
D +L+ + IG G + V + GE++A+K + K + + EI+ L +
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD-LPRIKTEIEALKN 64
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
+RH++I +L + ++ Y E + +AY+
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 180 HHDCVPAILHRDVKCNNILLDSKYEAYLADFGL-AKLMNSTNYHHAMSRVAGSYGYIAPG 238
H HRD+K N+L D ++ L DFGL AK + +YH + GS Y AP
Sbjct: 125 HSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH--LQTCCGSLAYAAP- 178
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++I G + + ++DV+S G++L ++ G
Sbjct: 179 ----ELIQGKSY-LGSEADVWSMGILLYVLMCG 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 162
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 215
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 216 -RFTSASDVWMFGVCMWEIL 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EI L +RH +I+KL + + +++ Y + E R +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR-RFFQQI 117
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
+ Y H I+HRD+K N+LLD +ADFGL+ +M N+ + GS
Sbjct: 118 ICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSP 171
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
Y AP ++I G + + DV+S G+VL +L GR
Sbjct: 172 NYAAP-----EVING-KLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 37/289 (12%)
Query: 62 NILECLKDENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTK-RDEEPVDSFAAEIQILGH 119
N L + E IG+G VY+A + +G +A+KK+ D + EI +L
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 120 IRHRNIVKLLG-YCSNKSVKLLL----YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ 174
+ H N++K + + + ++L +S + T +K V
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPE-RTVWKYFVQLCS 147
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L ++H ++HRD+K N+ + + L D GL + +S A + G+ Y
Sbjct: 148 ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYY 202
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK-KM 293
++P + GY KSD++S G +L E+ + +S P GD +++ KK +
Sbjct: 203 MSPERIHEN---GYNF----KSDIWSLGCLLYEMAALQS---PFYGDKMNLYSLCKKIEQ 252
Query: 294 GSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
+ P S D +E+ Q + + C+N P +RP + V
Sbjct: 253 CDYPPLPS----------DHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 72 VIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRH-------- 122
V+G+G G V KA + A+KK+ T EE + + +E+ +L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 123 -----RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-KIAVGSAQGL 176
RN VK + KS + Y Y ++ + L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK---------LMNSTNYHHAMSR 227
+Y+H I+HRD+K NI +D + DFGLAK ++S N +
Sbjct: 130 SYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 228 VAGSYG---YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+ + G Y+A +++ G T + EK D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVAT-----EVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 187
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 188 -RFTSASDVWMFGVCMWEIL 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T+ + ++A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 201 PESLKDGVF-------TTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 239
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 131
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 184
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 185 -RFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 139
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 192
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 193 -RFTSASDVWMFGVCMWEIL 211
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVL 148
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 203
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 204 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 244
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A++K+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 150
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H + + Y AP +I+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP-----EIMLN 205
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 206 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 246
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 80
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T+ + ++A
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 198 PESLKDGVF-------TTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 236
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 237 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + YI + I Q GL Y+H +L
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 151
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H + + Y AP +I+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP-----EIMLN 206
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 207 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 247
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 187
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 188 -RFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 136
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 189
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 190 -RFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 137
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 190
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 191 -RFTSASDVWMFGVCMWEIL 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 57/286 (19%)
Query: 73 IGKGCSG-VVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK---- 127
IG+G G + +G +K++ ++ + + E+ +L +++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 128 ---------LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY 178
++ YC L+ I+ DW + +A L +
Sbjct: 92 FEENGSLYIVMDYCEGGD----LFKRINAQKGVLFQEDQIL-DWFVQICLA------LKH 140
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA-GSYGYIAP 237
+H ILHRD+K NI L L DFG+A+++NST ++R G+ Y++P
Sbjct: 141 VHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST---VELARACIGTPYYLSP 194
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFE 297
C+ KSD+++ G VL E+ + + A + G ++V +K GSF
Sbjct: 195 EICE-------NKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLV--LKIISGSFP 243
Query: 298 PAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
P L+ L Q+ + +P +RP++ ++
Sbjct: 244 PVSLHYSYDLRSLVSQLFKR--------------NPRDRPSVNSIL 275
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%)
Query: 73 IGKGCSGVVYKA---EMPNGEL---IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G+G G+VY+ ++ GE +AVK + ++ E ++ F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 127 KLLGYCSNKSVKLL---------LYNYI-SXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+LLG S L+ L +Y+ S + ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
AYL+ +HRD+ N ++ + + DFG+ + + T+ + ++A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSF 296
P K + T SD++S+GVVL EI S A QP G + +
Sbjct: 201 PESLKDGVF-------TTSSDMWSFGVVLWEITS--LAEQPYQG------------LSNE 239
Query: 297 EPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+ ++D PD + + + + C +P RPT E+V LL
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 72 VIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG G G K +G+++ K+L E +E+ +L ++H NIV+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 131 YCSNKSVKLLLY--------NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+++ L + S ++ R + A + D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+LHRD+K N+ LD K L DFGLA+++N + A + V Y Y++P +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFVGTPY-YMSPEQMN- 189
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEI 268
M+ EKSD++S G +L E+
Sbjct: 190 ------RMSYNEKSDIWSLGCLLYEL 209
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 27/244 (11%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + KS++ +Y + D E + G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMG 294
P ++I G M E D++S G ++ E++ G + P HI +W K +++G
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGCIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLG 242
Query: 295 SFEP 298
+ P
Sbjct: 243 TPSP 246
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G G+V A + N +A+KK+ + + EI+IL RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ---GLAYLHHDCVPAIL 188
+++ + Y+ + I Q GL Y+H +L
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVL 166
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPGKCKLQIIY- 246
HRD+K +N+LL++ + + DFGLA++ + + H ++ + Y AP +I+
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP-----EIMLN 221
Query: 247 --GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMG 294
GYT +I D++S G +L E+LS R I G H ++ + +G
Sbjct: 222 SKGYTKSI----DIWSVGCILAEMLSNRP-----IFPGKHYLDQLNHILG 262
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQI--LGHIR 121
L+ LK +IG+G G VYK + + +AVK R +F E I + +
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ-----NFINEKNIYRVPLME 65
Query: 122 HRNIVKLL----GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
H NI + + ++ ++ LL DW + ++A +GLA
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA 125
Query: 178 YLHHDC------VPAILHRDVKCNNILLDSKYEAYLADFGLA------KLMNSTNYHHAM 225
YLH + PAI HRD+ N+L+ + ++DFGL+ +L+ +A
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
G+ Y+AP + + + ++ D+Y+ G++ EI
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPVDSFA 111
+KL DN+L + D +G G G V + M ++ K+ K ++ +
Sbjct: 2 KKLFLKRDNLL--IADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM 58
Query: 112 AEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG 171
E QI+ + + IV+L+G C +++ L++ ++
Sbjct: 59 REAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
+ G+ YL +HRD+ N+LL +++ A ++DFGL+K + + + ++ +R AG
Sbjct: 119 VSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-ARSAGK 174
Query: 232 Y--GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ + AP + + +SDV+SYGV + E LS
Sbjct: 175 WPLKWYAPECINFR-------KFSSRSDVWSYGVTMWEALS 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +AVK + + E D F E Q + + H +VK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 133 SNKSVKLLLYNYISX-XXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
S + ++ YIS + ++ +G+A+L +HRD
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+ N L+D ++DFG+ + + Y S G P K ++ Y
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------VSSVGTKFPVKWSAPEVFHY-FK 181
Query: 252 ITEKSDVYSYGVVLLEILS 270
+ KSDV+++G+++ E+ S
Sbjct: 182 YSSKSDVWAFGILMWEVFS 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 72 VIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG 130
IG G G K +G+++ K+L E +E+ +L ++H NIV+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 131 YCSNKSVKLLLY--------NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHD 182
+++ L + S ++ R + A + D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+LHRD+K N+ LD K L DFGLA+++N G+ Y++P +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFVGTPYYMSPEQMN- 189
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEI 268
M+ EKSD++S G +L E+
Sbjct: 190 ------RMSYNEKSDIWSLGCLLYEL 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 90
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ + ++
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 208 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 256
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 257 ------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 296
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 67 LKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK------RDEEPVDSFAAEIQ 115
L+DE ++ K C V E + +A+K + K K R+ +P + EI+
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR---YKIAVGS 172
IL + H I+K+ + + ++L + + Y++ +
Sbjct: 67 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 125
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
+ YLH + I+HRD+K N+LL S+ E L DFG +K++ T+ M +
Sbjct: 126 ---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLC 176
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP GY + D +S GV+L LSG
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 214
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMGSFEP 298
G M E D++S G ++ E++ G + P HI +W K +++G+ P
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLGTPSP 246
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ +
Sbjct: 139 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKK 291
+++P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 196 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME 246
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 247 G--------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 287
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 514
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 567
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 568 -RFTSASDVWMFGVCMWEIL 586
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 27/244 (11%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + KS++ +Y + D E + G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMG 294
P ++I G M E D++S G ++ E++ G + P HI +W K +++G
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGCIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLG 242
Query: 295 SFEP 298
+ P
Sbjct: 243 TPSP 246
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ +
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKK 291
+++P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 192 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME 242
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 243 G--------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMGSFEP 298
G M E D++S G ++ E++ G + P HI +W K +++G+ P
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLGTPSP 246
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 67 LKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK------RDEEPVDSFAAEIQ 115
L+DE ++ K C V E + +A+K + K K R+ +P + EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR---YKIAVGS 172
IL + H I+K+ + + ++L + + Y++ +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
+ YLH + I+HRD+K N+LL S+ E L DFG +K++ T+ M +
Sbjct: 127 ---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLC 177
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP GY + D +S GV+L LSG
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 80
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ + ++
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 198 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 246
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 247 ------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 286
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 83
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ + ++
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 201 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 249
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 250 ------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 67 LKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK------RDEEPVDSFAAEIQ 115
L+DE ++ K C V E + +A+K + K K R+ +P + EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR---YKIAVGS 172
IL + H I+K+ + + ++L + + Y++ +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
+ YLH + I+HRD+K N+LL S+ E L DFG +K++ T+ M +
Sbjct: 127 ---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLC 177
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP GY + D +S GV+L LSG
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 90
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ + ++
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 208 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 256
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 257 ------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 296
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 26/234 (11%)
Query: 45 SYPWTFIPFQKLNFTIDNILECLKDENVIGKGCSG---VVYKAEMPNGELIAVKKLWKTK 101
S P F + +NF IL IGKG G +V K + ++ A+K + K K
Sbjct: 1 SMPPVFDENEDVNFDHFEILRA------IGKGSFGKVCIVQKND--TKKMYAMKYMNKQK 52
Query: 102 ---RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXX 158
R+E V + E+QI+ + H +V L ++ ++ + +
Sbjct: 53 CVERNE--VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV 110
Query: 159 XXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS 218
ET L YL + I+HRD+K +NILLD ++ DF +A ++
Sbjct: 111 HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167
Query: 219 TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
++ +AG+ Y+AP + GY+ + D +S GV E+L GR
Sbjct: 168 ET---QITTMAGTKPYMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGR 214
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG- 130
IG G G+V A + G +AVKKL + +++ E+ +L + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 131 YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+ K+++ +Y + D E + G+ +LH I+
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRD+K +NI++ S + DFGLA+ TN+ M+ + Y AP ++ + GY
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR-TACTNF--MMTPYVVTRYYRAP---EVILGMGY 202
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK 290
N+ D++S G ++ E++ G V Q D HI +W K
Sbjct: 203 AANV----DIWSVGCIMGELVKG--CVIFQGTD--HIDQWNK 236
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ + L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 187
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 188 -RFTSASDVWMFGVCMWEIL 206
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 67 LKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK------RDEEPVDSFAAEIQ 115
L+DE ++ K C V E + +A+K + K K R+ +P + EI+
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR---YKIAVGS 172
IL + H I+K+ + + ++L + + Y++ +
Sbjct: 74 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 132
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
+ YLH + I+HRD+K N+LL S+ E L DFG +K++ T+ M +
Sbjct: 133 ---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLC 183
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP GY + D +S GV+L LSG
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 67 LKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK------RDEEPVDSFAAEIQ 115
L+DE ++ K C V E + +A+K + K K R+ +P + EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 116 ILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETR---YKIAVGS 172
IL + H I+K+ + + ++L + + Y++ +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
+ YLH + I+HRD+K N+LL S+ E L DFG +K++ T+ M +
Sbjct: 127 ---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLC 177
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP GY + D +S GV+L LSG
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
++HRDVK +N+LLD LADFG M+ T H + V G+ YI+P K Q
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGG 252
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRS 273
GY + D +S GV L E+L G +
Sbjct: 253 DGY---YGRECDWWSVGVFLFEMLVGDT 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ +
Sbjct: 142 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKK 291
+++P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 199 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME 249
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 250 G--------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ +
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKK 291
+++P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 198 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME 248
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 249 G--------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 289
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKLL 129
VIG+G V + + I K+ K + D+E +D E + + + L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 130 GYCSNKSVKLLLY-NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
C +L Y++ E + + L YLH I+
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGII 143
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+RD+K +N+LLDS+ L D+G+ K S G+ YIAP + + YG+
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 200
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
++ D ++ GV++ E+++GRS
Sbjct: 201 SV------DWWALGVLMFEMMAGRS 219
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKLL 129
VIG+G V + + I K+ K + D+E +D E + + + L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 130 GYCSNKSVKLLLY-NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
C +L Y++ E + + L YLH I+
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GII 132
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+RD+K +N+LLDS+ L D+G+ K S G+ YIAP + + YG+
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 189
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
++ D ++ GV++ E+++GRS
Sbjct: 190 SV------DWWALGVLMFEMMAGRS 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKLL 129
VIG+G V + + I K+ K + D+E +D E + + + L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 130 GYCSNKSVKLLLY-NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
C +L Y++ E + + L YLH I+
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGII 128
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+RD+K +N+LLDS+ L D+G+ K S G+ YIAP + + YG+
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 185
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
++ D ++ GV++ E+++GRS
Sbjct: 186 SV------DWWALGVLMFEMMAGRS 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL E LADFG+A + T + G+
Sbjct: 135 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPF 189
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR---SAVQPQIGDGLHIVEWVK 290
++AP K Q Y K+D++S G+ +E+ G S + P + ++ +
Sbjct: 190 WMAPEVIK-QSAY------DSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIP 237
Query: 291 KKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
K P L+G + ++E ++ C+N P+ RPT KE++
Sbjct: 238 KN----NPPT------LEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 274
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK--KKMGSFEP 298
G M E D++S G ++ E++ G + P HI +W K +++G+ P
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMIKG-GVLFPGTD---HIDQWNKVIEQLGTPSP 246
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL E LADFG+A + T + G+
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPF 169
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR---SAVQPQIGDGLHIVEWVK 290
++AP K Q Y K+D++S G+ +E+ G S + P + ++ +
Sbjct: 170 WMAPEVIK-QSAY------DSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIP 217
Query: 291 KKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
K P L+G + ++E ++ C+N P+ RPT KE++
Sbjct: 218 KN----NPPT------LEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL E LADFG+A + T + G+
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPF 169
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR---SAVQPQIGDGLHIVEWVK 290
++AP K Q Y K+D++S G+ +E+ G S + P + ++ +
Sbjct: 170 WMAPEVIK-QSAY------DSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIP 217
Query: 291 KKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
K P L+G + ++E ++ C+N P+ RPT KE++
Sbjct: 218 KN----NPPT------LEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLA-KLMNSTNYHHAM 225
K+ V + L YL ++HRDVK +NILLD + + L DFG++ +L++ A
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD----KAK 181
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
R AG Y+AP + +I ++DV+S G+ L+E+ +G+
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDI--RADVWSLGISLVELATGQ 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 27/176 (15%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N ++ + + DFG+ + + T+Y+ +
Sbjct: 170 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
+++P K + Y SDV+S+GVVL EI + A QP G ++
Sbjct: 227 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQG-------LSNEQ 270
Query: 293 MGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+ F +LD K PD + + M C +P RP+ E+++ + E
Sbjct: 271 VLRFVMEGGLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL E LADFG+A + T + G+
Sbjct: 130 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPF 184
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR---SAVQPQIGDGLHIVEWVK 290
++AP K Q Y K+D++S G+ +E+ G S + P + ++ +
Sbjct: 185 WMAPEVIK-QSAY------DSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIP 232
Query: 291 KKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
K P L+G + ++E ++ C+N P+ RPT KE++
Sbjct: 233 KN----NPPT------LEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 269
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 51/241 (21%)
Query: 65 ECLKDENVIGKGCSGVVYKAEM----PNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGH 119
E L+ V+G G G V A G I V K+ K K D ++ +E++++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 120 I-RHRNIVKLLGYCSNKSVKLLLYNY------ISXXXXXXXXXXXXXXDWETRYKI---- 168
+ H NIV LLG C+ L++ Y ++ ++E + ++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 169 -------------AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK- 214
A A+G+ +L + +HRD+ N+L+ + DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 215 LMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITE-----KSDVYSYGVVLLEIL 269
+M+ +NY + G +L + + ++ E KSDV+SYG++L EI
Sbjct: 222 IMSDSNY-------------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Query: 270 S 270
S
Sbjct: 269 S 269
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
G M E D++S G ++ E++ G
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 32/213 (15%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G G VYK G +A+K++ K +E + EI ++ ++H NIV+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------------QGLAYL 179
++ L++ ++ D T G QGLA+
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYM-------DSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 180 HHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H + ILHRD+K N+L++ + + L DFGLA+ + S + Y AP
Sbjct: 125 HEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDV 179
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
Y ++ D++S G +L E+++G+
Sbjct: 180 LMGSRTYSTSI------DIWSCGCILAEMITGK 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E +K +G G G V+ N +AVK L K V +F E ++ ++H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDK 69
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXD--WETRYKIAVGSAQGLAYLHHD 182
+V+L + + ++ Y++ + A+G+AY+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ N+L+ +ADFGLA+++ Y A + AP
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPE---- 181
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILS 270
I +G T KSDV+S+G++L EI++
Sbjct: 182 AINFG---CFTIKSDVWSFGILLYEIVT 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 17/250 (6%)
Query: 26 YKVEKASGMSTLPPGAEDFSYPWTFIP-FQKLNFTIDNILECLKDENVIGKGCSGVVYKA 84
+ +K LP E F P+ + +D L L+D+ +G G G V K
Sbjct: 330 WAADKGPQREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKG 388
Query: 85 --EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLL 141
+M K+ K + ++ + D AE ++ + + IV+++G C +S L++
Sbjct: 389 YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVM 448
Query: 142 YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDS 201
D + ++ + G+ YL +HRD+ N+LL +
Sbjct: 449 EMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVT 504
Query: 202 KYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYS 260
++ A ++DFGL+K + + NY+ A + + AP +C I Y + KSDV+S
Sbjct: 505 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-EC---INY---YKFSSKSDVWS 557
Query: 261 YGVVLLEILS 270
+GV++ E S
Sbjct: 558 FGVLMWEAFS 567
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 147
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 199
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
G M E D++S G ++ E++ G
Sbjct: 200 G--MGYKENVDIWSVGCIMGEMIKG 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPEVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
G M E D++S G ++ E++ G
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 40/249 (16%)
Query: 64 LECLKDENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEP-VDSFAAEIQILGHIR 121
+E K N++GKG VY+AE + G +A+K + K + V E++I ++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 122 HRNIVKLLGY-------------CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI 168
H +I++L Y C N + L N + + E R+ +
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-----------PFSENEARHFM 118
Query: 169 AVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH ILHRD+ +N+LL +ADFGLA + + H +
Sbjct: 119 H-QIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--L 172
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQ-IGDGLHIVE 287
G+ YI+P + + +G +SDV+S G + +L GR + + L+ V
Sbjct: 173 CGTPNYISP-EIATRSAHGL------ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
Query: 288 WVKKKMGSF 296
+M SF
Sbjct: 226 LADYEMPSF 234
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + ++P G+ A K + K E +I ++H NIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
S + L+++ ++ ++ + + Q L ++H + I+HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLNGIVHRD 128
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA + A AG+ GY++P + + YG
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGK 185
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
+ D+++ GV+L +L G
Sbjct: 186 PV------DMWACGVILYILLVG 202
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
A G+AYL+ + +HRD+ N + + + DFG+ + + T+Y+ +
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKK 291
+++P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 192 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME 242
Query: 292 KMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD +++ M C +P RP+ E+++ + E
Sbjct: 243 G--------GLLD-KPDNCPDMLLELM-------RMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + K+++ +Y + D E + G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
P ++I G M E D++S G ++ E++ +
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + ++P G+ A K + K E +I ++H NIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
S + L+++ ++ ++ + + Q L ++H + I+HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLNGIVHRD 128
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA + A AG+ GY++P + + YG
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGK 185
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
+ D+++ GV+L +L G
Sbjct: 186 PV------DMWACGVILYILLVG 202
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNG----ELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
E LK V+G+G G V+ + +G +L A+K L K E IL
Sbjct: 26 FELLK---VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 120 IRHRNIVKL-LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY 178
+ H IVKL + + + L+L + + ++ +A A L +
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDH 141
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH I++RD+K NILLD + L DFGL+K S ++ G+ Y+AP
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ T+ +D +S+GV++ E+L+G Q
Sbjct: 197 VVNRR---GH----TQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ + H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 97
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 208 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 241
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 72 VIGKGCSGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILGHIRHRNIVKLL 129
VIG+G V + + I ++ K + D+E +D E + + + L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 130 GYCSNKSVKLLLY-NYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
C +L Y++ E + + L YLH I+
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GII 175
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+RD+K +N+LLDS+ L D+G+ K S G+ YIAP + + YG+
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGE-DYGF 232
Query: 249 TMNITEKSDVYSYGVVLLEILSGRS 273
++ D ++ GV++ E+++GRS
Sbjct: 233 SV------DWWALGVLMFEMMAGRS 251
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNG----ELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
E LK V+G+G G V+ + +G +L A+K L K E IL
Sbjct: 27 FELLK---VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 120 IRHRNIVKL-LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY 178
+ H IVKL + + + L+L + + ++ +A A L +
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDH 142
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH I++RD+K NILLD + L DFGL+K S ++ G+ Y+AP
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 197
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ T+ +D +S+GV++ E+L+G Q
Sbjct: 198 VVNRR---GH----TQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 64 LECLKDENVIGKGCSGVVYKAEMPNG----ELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
E LK V+G+G G V+ + +G +L A+K L K E IL
Sbjct: 26 FELLK---VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 120 IRHRNIVKL-LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY 178
+ H IVKL + + + L+L + + ++ +A A L +
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDH 141
Query: 179 LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
LH I++RD+K NILLD + L DFGL+K S ++ G+ Y+AP
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ T+ +D +S+GV++ E+L+G Q
Sbjct: 197 VVNRR---GH----TQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK-LMNSTNYHHAM 225
KIAV + L +LH +++HRDVK +N+L+++ + + DFG++ L++S A
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV----AK 210
Query: 226 SRVAGSYGYIAPGKCKLQIIY-GYTMNITEKSDVYSYGVVLLEI 268
+ AG Y+AP + ++ GY++ KSD++S G+ ++E+
Sbjct: 211 TIDAGCKPYMAPERINPELNQKGYSV----KSDIWSLGITMIEL 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 514
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ + L DFGL++ M + Y+ A S+ ++AP +
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFR------ 567
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 568 -RFTSASDVWMFGVCMWEIL 586
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ + H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 111
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 222 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 255
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 19/224 (8%)
Query: 61 DNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHI 120
D + + + E+ +G+G + +VY+ + + K+ K D++ V + EI +L +
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRL 105
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
H NI+KL + L+ ++ + +AYLH
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 181 HDCVPAILHRDVKCNNILLDS---KYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+ I+HRD+K N+L + +ADFGL+K++ + M V G+ GY AP
Sbjct: 166 EN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAP 219
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+I+ G + D++S G++ +L G + GD
Sbjct: 220 -----EILRGCAYG--PEVDMWSVGIITYILLCGFEPFYDERGD 256
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 366 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 424
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 425 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 483
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 484 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP +C I Y + KSDV+S+GV++ E S
Sbjct: 541 AP-EC---INY---YKFSSKSDVWSFGVLMWEAFS 568
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKR-DEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + L K+ TK+ E +I ++H NIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+S L+++ ++ + +AY H + I+HR+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRN 130
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA +N + H AG+ GY++P K
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKD----- 182
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
++ D+++ GV+L +L G
Sbjct: 183 --PYSKPVDIWACGVILYILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKR-DEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + L K+ TK+ E +I ++H NIV+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+S L+++ ++ + +AY H + I+HR+
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRN 153
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA +N + H AG+ GY++P K Y
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKD---PY 207
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
+ + D+++ GV+L +L G
Sbjct: 208 SKPV----DIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKR-DEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + L K+ TK+ E +I ++H NIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+S L+++ ++ + +AY H + I+HR+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRN 130
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA +N + H AG+ GY++P K
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKD----- 182
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
++ D+++ GV+L +L G
Sbjct: 183 --PYSKPVDIWACGVILYILLVG 203
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 88
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 141
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 199 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVA----- 229
GL +LH I++RD+K +N++LDS+ +ADFG+ K H M V
Sbjct: 132 GLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-------EHMMDGVTTREFC 181
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
G+ YIAP Q YG ++ D ++YGV+L E+L+G+ + D L
Sbjct: 182 GTPDYIAPEIIAYQ-PYGKSV------DWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 149
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 207 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 149
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 207 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 240
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 148
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M + Y AP ++I
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMVPFVVTRYYRAP-----EVIL 200
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
G M E D++S G ++ E++ G
Sbjct: 201 G--MGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKR-DEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+GKG VV + L K+ TK+ E +I ++H NIV+L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
+S L+++ ++ + +AY H + I+HR+
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRN 129
Query: 192 VKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
+K N+LL SK + LADFGLA +N + H AG+ GY++P K
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKD----- 181
Query: 249 TMNITEKSDVYSYGVVLLEILSG 271
++ D+++ GV+L +L G
Sbjct: 182 --PYSKPVDIWACGVILYILLVG 202
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPVDSFA 111
+KL DN+L + D +G G G V + M ++ K+ K ++ +
Sbjct: 328 KKLFLKRDNLL--IADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM 384
Query: 112 AEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVG 171
E QI+ + + IV+L+G C +++ L++ ++
Sbjct: 385 REAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
+ G+ YL +HR++ N+LL +++ A ++DFGL+K + + + ++ +R AG
Sbjct: 445 VSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-ARSAGK 500
Query: 232 Y--GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ + AP + + +SDV+SYGV + E LS
Sbjct: 501 WPLKWYAPECINFR-------KFSSRSDVWSYGVTMWEALS 534
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 111
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 222 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD-FLMEALIISKFNHQNIV 111
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 222 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 113
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 166
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 224 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 257
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + K+++ +Y + D E + G+
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 133 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRA 186
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
P ++I G M E D++S G ++ E++ +
Sbjct: 187 P-----EVILG--MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 208 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 65 ECLKDENVIGKGCSGVVYKAE----MPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILG 118
EC + V+GKG G V++ G++ A+K L K R+ + AE IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 119 HIRHRNIVKLLGYCSNKSVKL-LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
++H IV L+ Y KL L+ Y+S +T + L
Sbjct: 77 EVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+LH I++RD+K NI+L+ + L DFGL K S + G+ Y+AP
Sbjct: 136 HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP 190
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ + D +S G ++ ++L+G
Sbjct: 191 ---EILMRSGHNRAV----DWWSLGALMYDMLTG 217
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 103
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 156
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 214 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 65 ECLKDENVIGKGCSGVVYKAE----MPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILG 118
EC + V+GKG G V++ G++ A+K L K R+ + AE IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 119 HIRHRNIVKLLGYCSNKSVKL-LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
++H IV L+ Y KL L+ Y+S +T + L
Sbjct: 77 EVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+LH I++RD+K NI+L+ + L DFGL K S + G+ Y+AP
Sbjct: 136 HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP 190
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ + D +S G ++ ++L+G
Sbjct: 191 ---EILMRSGHNRAV----DWWSLGALMYDMLTG 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 63 ILECLKDENVIGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
+L+ ++ IG G G+V Y A + +A+KKL + +++ E+ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 120 IRHRNIVKLLG-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ H+NI+ LL + K+++ +Y + D E + G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
+LH I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRA 193
Query: 237 PGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
P ++I G M E D++S G ++ E++ +
Sbjct: 194 P-----EVILG--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 137
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 190
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + Y+
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 248 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 123
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 176
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 234 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 32/180 (17%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYG 233
+GL YLH + +HRD+K N+LL + + LADFG+A + T + G+
Sbjct: 131 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPF 185
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKM 293
++AP ++I + K+D++S G+ +E+ G +P D +H
Sbjct: 186 WMAP-----EVIQQSAYD--SKADIWSLGITAIELAKG----EPPNSD-MH--------- 224
Query: 294 GSFEPAVSILDTKLQGLPDQMVQEMLQTLG-IAMFCVNSSPAERPTMKEVVALLMEVKSA 352
+ +L + P +V + ++ C+N P+ RPT KE++ VK++
Sbjct: 225 -----PMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 114
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 167
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + Y+
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 225 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 258
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 23 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 81
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 82 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 140
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 141 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP +C I Y + KSDV+S+GV++ E S
Sbjct: 198 AP-EC---INY---YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 23 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 81
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 82 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 140
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 141 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP +C I Y + KSDV+S+GV++ E S
Sbjct: 198 AP-EC---INY---YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 53 FQKLNFTIDN---ILECLKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK--- 101
F + T+D+ + L+DE ++ K C V E + +A++ + K K
Sbjct: 116 FVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI 175
Query: 102 ---RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXX 158
R+ +P + EI+IL + H I+K+ + + ++L
Sbjct: 176 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR 235
Query: 159 XXDWETR---YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGL 212
+ + Y++ + + YLH + I+HRD+K N+LL S+ E L DFG
Sbjct: 236 LKEATCKLYFYQMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288
Query: 213 AKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+K++ T+ M + G+ Y+AP GY + D +S GV+L LSG
Sbjct: 289 SKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 340
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 73 IGKGCSGVVYKAE---MPNGE---LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+G G G VY+ + MPN +AVK L + +++ +D F E I+ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK--------------IAVGS 172
+ +G + +L ++ ETR + +A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYE---AYLADFGLAKLMNSTNYHHAMSRVA 229
A G YL + +HRD+ N LL A + DFG+A+ + +Y+
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
++ P + ++ I+ T K+D +S+GV+L EI S
Sbjct: 208 LPVKWMPP-EAFMEGIF------TSKTDTWSFGVLLWEIFS 241
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 13 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 71
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 72 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 130
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 131 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP + I Y + KSDV+S+GV++ E S
Sbjct: 188 AP-----ECINYYK--FSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 21 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 79
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 80 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 138
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 139 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP +C I Y + KSDV+S+GV++ E S
Sbjct: 196 AP-EC---INY---YKFSSKSDVWSFGVLMWEAFS 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 53 FQKLNFTIDN---ILECLKDENVIGK-----GCSGVVYKAEMPNGELIAVKKLWKTK--- 101
F + T+D+ + L+DE ++ K C V E + +A++ + K K
Sbjct: 130 FVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI 189
Query: 102 ---RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXX 158
R+ +P + EI+IL + H I+K+ + + ++L
Sbjct: 190 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR 249
Query: 159 XXDWETR---YKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGL 212
+ + Y++ + + YLH + I+HRD+K N+LL S+ E L DFG
Sbjct: 250 LKEATCKLYFYQMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 302
Query: 213 AKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+K++ T+ M + G+ Y+AP GY + D +S GV+L LSG
Sbjct: 303 SKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 354
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 7 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 65
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 66 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 124
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 125 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP +C I Y + KSDV+S+GV++ E S
Sbjct: 182 AP-EC---INY---YKFSSKSDVWSFGVLMWEAFS 209
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 39/225 (17%)
Query: 72 VIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRH-------- 122
V+G+G G V KA + A+KK+ T EE + + +E+ +L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 123 -----RNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY-KIAVGSAQGL 176
RN VK KS + Y Y ++ + L
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK---------LMNSTNY---HHA 224
+Y+H I+HR++K NI +D + DFGLAK ++S N
Sbjct: 130 SYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 225 MSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
++ G+ Y+A +++ G T + EK D YS G++ E +
Sbjct: 187 LTSAIGTAXYVAT-----EVLDG-TGHYNEKIDXYSLGIIFFEXI 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 1 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 59
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 60 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 118
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 119 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP + I Y + KSDV+S+GV++ E S
Sbjct: 176 AP-----ECINYYK--FSSKSDVWSFGVLMWEAFS 203
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
+G+ Y+H ++HRD+K +NI L + + DFG L+ S +R G+
Sbjct: 146 TKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGKRTRSKGTL 199
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
Y++P + Q YG + D+Y+ G++L E+ LH+ +
Sbjct: 200 RYMSPEQISSQ-DYGKEV------DLYALGLILAEL--------------LHVCD----- 233
Query: 293 MGSFEPAVSILDTK---LQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+FE + D + + + D+ + +LQ L ++ P +RP E++ L
Sbjct: 234 -TAFETSKFFTDLRDGIISDIFDKKEKTLLQKL------LSKKPEDRPNTSEILRTLTVW 286
Query: 350 KSAPEE 355
K +PE+
Sbjct: 287 KKSPEK 292
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 3 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 61
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 62 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 120
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + NY+ A + +
Sbjct: 121 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP + I Y + KSDV+S+GV++ E S
Sbjct: 178 AP-----ECINYYK--FSSKSDVWSFGVLMWEAFS 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 46/223 (20%)
Query: 72 VIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILG-HIRHRNIVKLL 129
++G G G VYK + G+L A+K + T +EE + EI +L + HRNI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI---KQEINMLKKYSHHRNIATYY 87
Query: 130 G-------------------YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAV 170
G +C SV L+ N +W I
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN---------TKGNTLKEEWIAY--ICR 136
Query: 171 GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAG 230
+GL++LH ++HRD+K N+LL E L DFG++ ++ T + G
Sbjct: 137 EILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR--NTFIG 191
Query: 231 SYGYIAPG--KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ ++AP C Y KSD++S G+ +E+ G
Sbjct: 192 TPYWMAPEVIACDENPDATYDF----KSDLWSLGITAIEMAEG 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 14/200 (7%)
Query: 73 IGKGCSGVVYKA--EMPNGELIAVK-KLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG+G G V++ P +AV K K + + F E + H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
G + V +++ D + A + LAYL +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 190 RDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
RD+ N+L+ S L DFGL++ M + A S+ ++AP +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA-SKGKLPIKWMAPESINFR------ 187
Query: 250 MNITEKSDVYSYGVVLLEIL 269
T SDV+ +GV + EIL
Sbjct: 188 -RFTSASDVWMFGVCMWEIL 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 34/225 (15%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
E GK + + G K+ K + +E +L + H +++KL
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXX----------------DWETRYKIAVGS- 172
G CS LL+ Y D + +G
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 173 -------AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+QG+ YL +++HRD+ NIL+ + ++DFGL++ + +
Sbjct: 153 ISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEED 204
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
S V S G I ++ ++ + T +SDV+S+GV+L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 75
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+ + ++
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 193 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 241
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD +++ M C +P RP+ E+++ + E
Sbjct: 242 ------GLLD-KPDNCPDMLLELM-------RMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 143
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 144 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 196
Query: 227 RV-AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+V G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 197 KVLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 249
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 250 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 145
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 146 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 198
Query: 227 RV-AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+V G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 199 KVLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 251
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 252 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 119
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 120 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 172
Query: 227 RV-AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+V G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 173 KVLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 225
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 226 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 264
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G SG VY A ++ G+ +A++++ ++ ++ + EI ++ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ Y++ + + + Q L +LH + ++HRD
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHSN---QVIHRD 141
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K +NILL L DFG + T S + G+ ++AP + + YG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSEMVGTPYWMAP-EVVTRKAYG---- 194
Query: 252 ITEKSDVYSYGVVLLEILSG 271
K D++S G++ +E++ G
Sbjct: 195 --PKVDIWSLGIMAIEMIEG 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 138
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWSPPE 191
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 192 VLMYS-KFSSKSDIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 122
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWSPPE 175
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 176 VLMYS-KFSSKSDIWAFGVLMWEIYS 200
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 62/298 (20%)
Query: 66 CLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHI-RHR 123
C KD V+G G G + M + +AVK++ SFA E+Q+L H
Sbjct: 27 CPKD--VLGHGAEGTIVYRGMFDNRDVAVKRILPE------CFSFADREVQLLRESDEHP 78
Query: 124 NIVKLLGYCSNKSVKLLLYNYISXXX-XXXXXXXXXXXDWE----TRYKIAVGSAQGLAY 178
N+++ +C+ K + + YI+ D+ + + GLA+
Sbjct: 79 NVIRY--FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133
Query: 179 LHHDCVPAILHRDVKCNNILLD-----SKYEAYLADFGLAKLMNSTNYHHAMSR---VAG 230
LH I+HRD+K +NIL+ K +A ++DFGL K + H+ SR V G
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR--HSFSRRSGVPG 188
Query: 231 SYGYIAP----GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLH-I 285
+ G+IAP CK N T D++S G V ++S +G H
Sbjct: 189 TEGWIAPEMLSEDCK--------ENPTYTVDIFSAGCVFYYVIS----------EGSHPF 230
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+ ++++ A S+ + D + +E+++ + IAM P +RP+ K V+
Sbjct: 231 GKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKM-IAM-----DPQKRPSAKHVL 282
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 123
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSRGSKFPVRWSPPE 176
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 177 VLMYS-KFSSKSDIWAFGVLMWEIYS 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 123
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWSPPE 176
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 177 VLMYS-KFSSKSDIWAFGVLMWEIYS 201
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 147
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 199
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 200 G--MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 118
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWSPPE 171
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 172 VLMYS-KFSSKSDIWAFGVLMWEIYS 196
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EI +L + H NI+KL +K L+ + D I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSK---YEAYLADFGLAKLMNSTNYHHAMSRVA 229
G+ YLH I+HRD+K NILL++K + DFGL+ + + R+
Sbjct: 156 LSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLG 210
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+Y YIAP K + EK DV+S GV++ +L G
Sbjct: 211 TAY-YIAPEVLKKK--------YNEKCDVWSCGVIMYILLCG 243
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 48/294 (16%)
Query: 73 IGKGCSGVVYKA-------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNI 125
+G+G G+VY+ + P +A+K + + E ++ F E ++ ++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIE-FLNEASVMKEFNCHHV 84
Query: 126 VKLLGYCSNKSVKLLLYNYI----------SXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
V+LLG S L++ + S ++A A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+AYL+ + +HRD+ N ++ + + DFG+ + + T+ + ++
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIG-DGLHIVEWVKKKMG 294
+P K + Y SDV+S+GVVL EI + A QP G ++ +V +
Sbjct: 202 SPESLKDGVFTTY-------SDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVMEG-- 250
Query: 295 SFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLME 348
+LD K PD + + M C +P RP+ E+++ + E
Sbjct: 251 ------GLLD-KPDNCPDMLFELM-------RMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 129
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + Y S G P +
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWSPPE 182
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 183 VLMYS-KFSSKSDIWAFGVLMWEIYS 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G SG VY A ++ G+ +A++++ ++ ++ + EI ++ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ Y++ + + + Q L +LH + ++HRD
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHSN---QVIHRD 141
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K +NILL L DFG + T S + G+ ++AP + + YG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVGTPYWMAP-EVVTRKAYG---- 194
Query: 252 ITEKSDVYSYGVVLLEILSG 271
K D++S G++ +E++ G
Sbjct: 195 --PKVDIWSLGIMAIEMIEG 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 71 NVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEP---VDSFAAEIQILGHIRHRNIV 126
VIGKG VV + G+ AVK + K P + E I ++H +IV
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------QGLAYLH 180
+LL S+ + +++ ++ D Y AV S + L Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHYMRQILEALRYCH 147
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+ I+HRDVK N+LL SK + L DFG+A + + A RV G+ ++AP
Sbjct: 148 DN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL-VAGGRV-GTPHFMAP 202
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
K + YG + DV+ GV+L +LSG
Sbjct: 203 EVVKRE-PYGKPV------DVWGCGVILFILLSG 229
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G SG VY A ++ G+ +A++++ ++ ++ + EI ++ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 85
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ Y++ + + + Q L +LH + ++HRD
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHSN---QVIHRD 141
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K +NILL L DFG + T S + G+ ++AP + + YG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSXMVGTPYWMAP-EVVTRKAYG---- 194
Query: 252 ITEKSDVYSYGVVLLEILSG 271
K D++S G++ +E++ G
Sbjct: 195 --PKVDIWSLGIMAIEMIEG 212
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 140
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 192
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 193 G--MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 145
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 197
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 198 G--MGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 139
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 191
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 192 G--MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 140
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 192
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 193 G--MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 34/225 (15%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
E GK + + G K+ K + +E +L + H +++KL
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXX----------------DWETRYKIAVGS- 172
G CS LL+ Y D + +G
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 173 -------AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+QG+ YL ++HRD+ NIL+ + ++DFGL++ + +
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEED 204
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
S V S G I ++ ++ + T +SDV+S+GV+L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G SG VY A ++ G+ +A++++ ++ ++ + EI ++ ++ NIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 86
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ Y++ + + + Q L +LH + ++HRD
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHSN---QVIHRD 142
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K +NILL L DFG + T S + G+ ++AP + + YG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSXMVGTPYWMAP-EVVTRKAYG---- 195
Query: 252 ITEKSDVYSYGVVLLEILSG 271
K D++S G++ +E++ G
Sbjct: 196 --PKVDIWSLGIMAIEMIEG 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 147
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 199
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 200 G--MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSK--YEAYLADFGLAKLMNSTNY--HHAMSRVAG 230
L YLH+ I HRD+K N L + +E L DFGL+K N ++ M+ AG
Sbjct: 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVK 290
+ ++AP +++ + K D +S GV+L +L G + P + D I + +
Sbjct: 237 TPYFVAP-----EVLNTTNESYGPKCDAWSAGVLLHLLLMG-AVPFPGVNDADTISQVLN 290
Query: 291 KKMGSFEPAVSIL 303
KK+ P ++L
Sbjct: 291 KKLCFENPNYNVL 303
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
KIAV + L +LH +++HRDVK +N+L+++ + + DFG++ + A
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---AKD 167
Query: 227 RVAGSYGYIAPGKCKLQIIY-GYTMNITEKSDVYSYGVVLLEI 268
AG Y+AP + ++ GY++ KSD++S G+ ++E+
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSV----KSDIWSLGITMIEL 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 184
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 236
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 237 G--MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 113/301 (37%), Gaps = 51/301 (16%)
Query: 65 ECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN 124
E +K +G G G V+ N +AVK L K V +F E ++ ++H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDK 68
Query: 125 IVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXD--WETRYKIAVGSAQGLAYLHHD 182
+V+L + + ++ +++ + A+G+AY+
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 183 CVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
+HRD++ N+L+ +ADFGLA+++ Y A + AP
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINF 184
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILS-------GRS--AVQPQIGDGLHIVEWVKKKM 293
T KS+V+S+G++L EI++ GR+ V + G +
Sbjct: 185 GC-------FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM-------- 229
Query: 294 GSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSAP 353
+++ PD++ I C ERPT + ++L + +A
Sbjct: 230 -----------PRMENCPDELYD-------IMKMCWKEKAEERPTFDYLQSVLDDFYTAT 271
Query: 354 E 354
E
Sbjct: 272 E 272
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ K+++ +Y + D E + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 184
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 236
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 237 G--MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKL-------WKTKRDEEPVDSFAAEIQI 116
E + + ++G+G S VV + P + AVK + + + +E ++ E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 117 LGHIR-HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
L + H NI++L + L+++ + + KI +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+ LH I+HRD+K NILLD L DFG + ++ + V G+ Y+
Sbjct: 137 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYL 190
Query: 236 APG--KCKLQIIY-GYTMNITEKSDVYSYGVVLLEILSG 271
AP +C + + GY + D++S GV++ +L+G
Sbjct: 191 APEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 70 ENVIGKGCSGVVYKA-EMPNGELIAVKKL-------WKTKRDEEPVDSFAAEIQILGHIR 121
+ ++G+G S VV + P + AVK + + + +E ++ E+ IL +
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 122 -HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
H NI++L + L+++ + + KI + + LH
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 128
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG-- 238
I+HRD+K NILLD L DFG + ++ + V G+ Y+AP
Sbjct: 129 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEII 182
Query: 239 KCKLQIIY-GYTMNITEKSDVYSYGVVLLEILSG 271
+C + + GY + D++S GV++ +L+G
Sbjct: 183 ECSMNDNHPGYGKEV----DMWSTGVIMYTLLAG 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E RY + QG+ YLH++ ++HRD+K N+ L+ + + DFGLA +
Sbjct: 143 EARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-- 196
Query: 223 HAMSRVAGSYGYIAPGK-CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ YIAP CK G++ + D++S G +L +L G+ +
Sbjct: 197 ERKKXLCGTPNYIAPEVLCK----KGHSFEV----DIWSLGCILYTLLVGKPPFE 243
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 140
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 192
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 193 G--MGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 108/298 (36%), Gaps = 53/298 (17%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
E GK + + G K+ K + +E +L + H +++KL
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXX----------------DWETRYKIAVGS- 172
G CS LL+ Y D + +G
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 173 -------AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAM 225
+QG+ YL ++HRD+ NIL+ + ++DFGL++ + +
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEED 204
Query: 226 SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
S V S G I ++ ++ + T +SDV+S+GV+L EI++ P I
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP---- 258
Query: 286 VEWVKKKMGSFEPAVSILDTKLQ-GLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
E ++L T + PD +EM + + + C P +RP ++
Sbjct: 259 -----------ERLFNLLKTGHRMERPDNCSEEMYR---LMLQCWKQEPDKRPVFADI 302
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E RY + QG+ YLH++ ++HRD+K N+ L+ + + DFGLA +
Sbjct: 143 EARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER 198
Query: 223 HAMSRVAGSYGYIAPGK-CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ YIAP CK G++ + D++S G +L +L G+ +
Sbjct: 199 KKT--LCGTPNYIAPEVLCK----KGHSFEV----DIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E RY + QG+ YLH++ ++HRD+K N+ L+ + + DFGLA +
Sbjct: 127 EARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-- 180
Query: 223 HAMSRVAGSYGYIAPGK-CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ YIAP CK G++ + D++S G +L +L G+ +
Sbjct: 181 ERKKDLCGTPNYIAPEVLCK----KGHSFEV----DIWSLGCILYTLLVGKPPFE 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 151
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M+ + Y AP ++I
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAP-----EVIL 203
Query: 247 GYTMNITEKSDVYSYGVVLLEIL 269
G M E D++S G ++ E++
Sbjct: 204 G--MGYKENVDLWSVGCIMGEMV 224
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 163 ETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYH 222
E RY + QG+ YLH++ ++HRD+K N+ L+ + + DFGLA +
Sbjct: 143 EARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-- 196
Query: 223 HAMSRVAGSYGYIAPGK-CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+ G+ YIAP CK G++ + D++S G +L +L G+ +
Sbjct: 197 ERKKDLCGTPNYIAPEVLCK----KGHSFEV----DIWSLGCILYTLLVGKPPFE 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 122 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 174
Query: 227 R-VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+ + G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 175 KTLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 227
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 228 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 125
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 126 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 178
Query: 227 R-VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+ + G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 179 KTLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 231
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 232 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 65 ECLKDENVIGKGCSGVVYKA-EMPNGELIAVKKL-------WKTKRDEEPVDSFAAEIQI 116
E + + ++G+G S VV + P + AVK + + + +E ++ E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 117 LGHIR-HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQG 175
L + H NI++L + L+++ + + KI +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
+ LH I+HRD+K NILLD L DFG + ++ + V G+ Y+
Sbjct: 137 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVCGTPSYL 190
Query: 236 APG--KCKLQIIY-GYTMNITEKSDVYSYGVVLLEILSG 271
AP +C + + GY + D++S GV++ +L+G
Sbjct: 191 APEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAG 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 173 AQGLAYLH-HDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGS 231
A+G+ +L C+ HRD+ NILL + DFGLA+ + +
Sbjct: 209 ARGMEFLSSRKCI----HRDLAARNILLSENNVVKICDFGLAR------------DIYKN 252
Query: 232 YGYIAPGKCKLQIIYGYTMNI-----TEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIV 286
Y+ G +L + + +I + KSDV+SYGV+L EI S + P +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 287 EWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALL 346
+++ M P S E+ Q I + C + P ERP E+V L
Sbjct: 313 SRLREGMRMRAPEYS-------------TPEIYQ---IMLDCWHRDPKERPRFAELVEKL 356
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 65 ECLKDENVIGKGCSGVVYKA------EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILG 118
E LK +G+G G V +A + P +AVK L + E + E++IL
Sbjct: 27 ERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASE-YKALMTELKILT 85
Query: 119 HIRHR-NIVKLLGYCSNKSVKLLL 141
HI H N+V LLG C+ + L++
Sbjct: 86 HIGHHLNVVNLLGACTKQGGPLMV 109
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYC-SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRY 166
+ + EI I + H+++V G+ N V ++L + E RY
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
+ G YLH + ++HRD+K N+ L+ E + DFGLA Y
Sbjct: 122 YLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 174
Query: 227 R-VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
+ + G+ YIAP + G++ + DV+S G ++ +L G+ + ++
Sbjct: 175 KTLCGTPNYIAPEVLSKK---GHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETYL 227
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVV 343
+KK S ++ + L +Q+MLQT P RPT+ E++
Sbjct: 228 --RIKKNEYSIPKHINPVAASL-------IQKMLQT----------DPTARPTINELL 266
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVAGS 231
G+ YLH I+HRD+K N+LL+SK + L DFGL+ + + M G+
Sbjct: 148 GVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN---QKKMKERLGT 201
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
YIAP + + EK DV+S GV+L +L+G
Sbjct: 202 AYYIAPEVLRKK--------YDEKCDVWSIGVILFILLAG 233
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMEPEVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 61 DNILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
++I + +V+G G S V+ + +L+A+K + K K E S EI +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK-KALEGKEGSMENEIAVLHK 72
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
I+H NIV L + L+ +S ++ + YL
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 180 HHDCVPAILHRDVKCNNIL---LDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
H I+HRD+K N+L LD + ++DFGL+K+ + + +S G+ GY+A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 186
Query: 237 P 237
P
Sbjct: 187 P 187
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 73 IGKGCSGVV---YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
IG G G+V Y A + +A+KKL + +++ E+ ++ + H+NI+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 130 G-YCSNKSVKLL--LYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+ KS++ +Y + D E + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AG 146
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
I+HRD+K +NI++ S + DFGLA+ ++ M + Y AP ++I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMEPEVVTRYYRAP-----EVIL 198
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G M E D++S G ++ E++ +
Sbjct: 199 G--MGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 60 IDNILECLKDENVIGKGCSGVVYKA--EMPNGELIAVKKLWKTKRDEEPV-DSFAAEIQI 116
+D L L+D+ +G G G V K +M K+ K + ++ + D AE +
Sbjct: 7 LDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 65
Query: 117 LGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGL 176
+ + + IV+++G C +S L++ D + ++ + G+
Sbjct: 66 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGM 124
Query: 177 AYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST-NYHHAMSRVAGSYGYI 235
YL +HRD+ N+LL +++ A ++DFGL+K + + N + A + +
Sbjct: 125 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
AP + I Y + KSDV+S+GV++ E S
Sbjct: 182 AP-----ECINYYK--FSSKSDVWSFGVLMWEAFS 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 24/215 (11%)
Query: 65 ECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTKR-DEEPVDSFAAEIQILGHIRH 122
E K ++G+G S VV E+ A+K L K E V E ++ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 123 RNIVKLLGYCSNKSVKLLL-YNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
VKL +C KL +Y D L YLH
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
I+HRD+K NILL+ + DFG AK+++ + + G+ Y++P
Sbjct: 156 K---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL-- 210
Query: 242 LQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
+TEK SD+++ G ++ ++++G
Sbjct: 211 ----------LTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 73 IGKGCSGVVYKA--EMPNGE----LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+GKG VV + + P E +I KKL + RD + ++ E +I ++H NIV
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--SARDHQKLER---EARICRLLKHPNIV 93
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+L S + L+++ ++ ++ + + Q L ++H
Sbjct: 94 RLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIHQILESVNHIHQHD 150
Query: 187 ILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
I+HRD+K N+LL SK + LADFGLA + A AG+ GY++P + +
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLR-K 207
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSG 271
YG + D+++ GV+L +L G
Sbjct: 208 DPYGKPV------DIWACGVILYILLVG 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 61 DNILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKT--KRDEEPVDSFAAEIQIL 117
++I + + + +G G S VV E G+L AVK + K K E +++ EI +L
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN---EIAVL 74
Query: 118 GHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLA 177
I+H NIV L + + L+ +S + + +
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 178 YLHHDCVPAILHRDVKCNNILL---DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
YLH I+HRD+K N+L D + + ++DFGL+K+ + MS G+ GY
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGY 188
Query: 235 IAP 237
+AP
Sbjct: 189 VAP 191
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 51/313 (16%)
Query: 59 TIDNILECLKD----ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEI 114
I N + LK+ E ++G G SG V G +AVK++ + D EI
Sbjct: 5 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-----DFCDIALMEI 59
Query: 115 QILGHIR-HRNIVKLLGYCSNKSVKLL-----LYNYISXXXXXXXXXXXXXXDWETRYK- 167
++L H N+++ YCS + + L L N + Y
Sbjct: 60 KLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 168 --IAVGSAQGLAYLHHDCVPAILHRDVKCNNILL--DSKYEA-----------YLADFGL 212
+ A G+A+LH I+HRD+K NIL+ S++ A ++DFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 213 AKLMNS--TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
K ++S +++ ++ +G+ G+ AP + +T D++S G V ILS
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 271 GRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVN 330
P GD + + + S + + D L ++ +M ++
Sbjct: 235 --KGKHP-FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM----------ID 281
Query: 331 SSPAERPTMKEVV 343
P +RPT +V+
Sbjct: 282 HDPLKRPTAMKVL 294
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 43/235 (18%)
Query: 67 LKDENVIGKGCSGVVYKAEMPNGELI-AVKKLWKTK------------------------ 101
LKDE IGKG GVV A N A+K L K K
Sbjct: 17 LKDE--IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 102 RDEEPVDSFAAEIQILGHIRHRNIVKLLGYCS--NKSVKLLLYNYISXXXXXXXXXXXXX 159
+ P++ EI IL + H N+VKL+ N+ +++ ++
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 160 XDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST 219
+ + R+ +G+ YLH+ I+HRD+K +N+L+ +ADFG++ +
Sbjct: 135 SEDQARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 220 NYHHAMSRVAGSYGYIAPGKCK--LQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+ +S G+ ++AP +I G + DV++ GV L + G+
Sbjct: 191 D--ALLSNTVGTPAFMAPESLSETRKIFSGKAL------DVWAMGVTLYCFVFGQ 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G SG VY A ++ G+ +A++++ ++ ++ + EI ++ ++ NIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDS 86
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ Y++ + + + Q L +LH + ++HR+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHSN---QVIHRN 142
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K +NILL L DFG + T S + G+ ++AP + + YG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVGTPYWMAP-EVVTRKAYG---- 195
Query: 252 ITEKSDVYSYGVVLLEILSG 271
K D++S G++ +E++ G
Sbjct: 196 --PKVDIWSLGIMAIEMIEG 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 110/252 (43%), Gaps = 22/252 (8%)
Query: 27 KVEKASGMSTLPPGAEDFSYPWTFIPFQKLNFTIDNILEC------LKDENVIGKGCSGV 80
+ + +GM PPG + ++ + +++ L + IG+G +G+
Sbjct: 30 RARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGI 89
Query: 81 VYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKL 139
V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 90 VCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW 147
Query: 140 LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILL 199
++ ++ + E + + Q L+ LH ++HRD+K ++ILL
Sbjct: 148 VVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 203
Query: 200 DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVY 259
L+DFG ++ + G+ ++AP + ++ YG + D++
Sbjct: 204 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAP-ELISRLPYG------PEVDIW 254
Query: 260 SYGVVLLEILSG 271
S G++++E++ G
Sbjct: 255 SLGIMVIEMVDG 266
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRDVK +N+LLD LADFG MN + V G+ YI+P K Q
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGG 251
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRS 273
GY + D +S GV L E+L G +
Sbjct: 252 DGY---YGRECDWWSVGVFLYEMLVGDT 276
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRDVK +N+LLD LADFG MN + V G+ YI+P K Q
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGG 246
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRS 273
GY + D +S GV L E+L G +
Sbjct: 247 DGY---YGRECDWWSVGVFLYEMLVGDT 271
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
+HRDVK +N+LLD LADFG MN + V G+ YI+P K Q
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGG 251
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSGRS 273
GY + D +S GV L E+L G +
Sbjct: 252 DGY---YGRECDWWSVGVFLYEMLVGDT 276
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 42/186 (22%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
+G+ Y+H +++RD+K +NI L + + DFG L+ S R G+
Sbjct: 132 TKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGKRXRSKGTL 185
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
Y++P + Q YG + D+Y+ G++L E+ LH+ +
Sbjct: 186 RYMSPEQISSQ-DYGKEV------DLYALGLILAEL--------------LHVCD----- 219
Query: 293 MGSFEPAVSILDTK---LQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEV 349
+FE + D + + + D+ + +LQ L ++ P +RP E++ L
Sbjct: 220 -TAFETSKFFTDLRDGIISDIFDKKEKTLLQKL------LSKKPEDRPNTSEILRTLTVW 272
Query: 350 KSAPEE 355
K +PE+
Sbjct: 273 KKSPEK 278
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G +G+V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ ++ + E + + Q L+ LH ++HRD
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRD 150
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K ++ILL L+DFG ++ + G+ ++AP ++ YG
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELIS-RLPYG---- 203
Query: 252 ITEKSDVYSYGVVLLEILSG 271
+ D++S G++++E++ G
Sbjct: 204 --PEVDIWSLGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G +G+V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ ++ + E + + Q L+ LH ++HRD
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRD 152
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K ++ILL L+DFG ++ + G+ ++AP + ++ YG
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAP-ELISRLPYG---- 205
Query: 252 ITEKSDVYSYGVVLLEILSG 271
+ D++S G++++E++ G
Sbjct: 206 --PEVDIWSLGIMVIEMVDG 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I++RD+K NILLD + DFG AK + Y + G+ Y
Sbjct: 118 ALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX-----LCGTPDY 169
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
IAP T + D +S+G+++ E+L+G
Sbjct: 170 IAPEVVS-------TKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 61 DNILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
++I + +V+G G S V+ + +L+A+K + K E S EI +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHK 72
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
I+H NIV L + L+ +S ++ + YL
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 180 HHDCVPAILHRDVKCNNIL---LDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
H I+HRD+K N+L LD + ++DFGL+K+ + + +S G+ GY+A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 186
Query: 237 P 237
P
Sbjct: 187 P 187
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G +G+V A E G+ +AVKK+ R ++ + E+ I+ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ ++ + E + + + L+YLH+ ++HRD
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNE-EQIATVCLSVLRALSYLHNQ---GVIHRD 166
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K ++ILL S L+DFG ++ + G+ ++AP + ++ YG +
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX--LVGTPYWMAP-EVISRLPYGTEV- 222
Query: 252 ITEKSDVYSYGVVLLEILSG 271
D++S G++++E++ G
Sbjct: 223 -----DIWSLGIMVIEMIDG 237
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G +G+V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ ++ + E + + Q L+ LH ++HRD
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRD 141
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K ++ILL L+DFG ++ + G+ ++AP ++ YG
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELIS-RLPYG---- 194
Query: 252 ITEKSDVYSYGVVLLEILSG 271
+ D++S G++++E++ G
Sbjct: 195 --PEVDIWSLGIMVIEMVDG 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 110/252 (43%), Gaps = 22/252 (8%)
Query: 27 KVEKASGMSTLPPGAEDFSYPWTFIPFQKLNFTIDNILEC------LKDENVIGKGCSGV 80
+ + +GM PPG + ++ + +++ L + IG+G +G+
Sbjct: 107 RARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGI 166
Query: 81 VYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKL 139
V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 167 VCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW 224
Query: 140 LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILL 199
++ ++ + E + + Q L+ LH ++HRD+K ++ILL
Sbjct: 225 VVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 280
Query: 200 DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVY 259
L+DFG ++ + G+ ++AP + ++ YG + D++
Sbjct: 281 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAP-ELISRLPYGPEV------DIW 331
Query: 260 SYGVVLLEILSG 271
S G++++E++ G
Sbjct: 332 SLGIMVIEMVDG 343
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS--RVAG 230
A GL +L I++RD+K +N++LDS+ +ADFG+ K N ++ G
Sbjct: 452 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCG 504
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
+ YIAP Q YG ++ D +++GV+L E+L+G++ + + D L
Sbjct: 505 TPDYIAPEIIAYQ-PYGKSV------DWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYC 132
+G G GVV + +A+K + + E D F E +++ ++ H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 133 SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI----- 187
+ + ++ Y++ E R++ Q L + D A+
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR-------EMRHRF---QTQQLLEMCKDVCEAMEYLES 138
Query: 188 ---LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQI 244
LHRD+ N L++ + ++DFGL++ + S G P +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-------DEETSSVGSKFPVRWSPPE 191
Query: 245 IYGYTMNITEKSDVYSYGVVLLEILS 270
+ Y+ + KSD++++GV++ EI S
Sbjct: 192 VLMYS-KFSSKSDIWAFGVLMWEIYS 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
EIQ+L +RH+N+++L+ N+ + + Y+ E R+ +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCGMQEMLDSVPEKRFPVCQAH 112
Query: 173 A------QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
GL YLH I+H+D+K N+LL + ++ G+A+ ++
Sbjct: 113 GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLH 284
GS + P +I G K D++S GV L I +G + P GD ++
Sbjct: 170 TSQGSPAFQPP-----EIANGLDTFSGFKVDIWSAGVTLYNITTG---LYPFEGDNIY 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 73 IGKGCSGVVYKAEM-PNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
IG+G +G+V A + +G+L+AVKK+ R ++ + E+ I+ +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 132 CSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRD 191
++ ++ + E + + Q L+ LH ++HRD
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNE-EQIAAVCLAVLQALSVLHAQ---GVIHRD 145
Query: 192 VKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
+K ++ILL L+DFG ++ + G+ ++AP + ++ YG
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAP-ELISRLPYG---- 198
Query: 252 ITEKSDVYSYGVVLLEILSG 271
+ D++S G++++E++ G
Sbjct: 199 --PEVDIWSLGIMVIEMVDG 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 61 DNILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
++I + +V+G G S V+ + +L+A+K + K E S EI +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHK 72
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
I+H NIV L + L+ +S ++ + YL
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 180 HHDCVPAILHRDVKCNNIL---LDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
H I+HRD+K N+L LD + ++DFGL+K+ + + +S G+ GY+A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 186
Query: 237 P 237
P
Sbjct: 187 P 187
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS--RVAG 230
A GL +L I++RD+K +N++LDS+ +ADFG+ K N ++ G
Sbjct: 131 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCG 183
Query: 231 SYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGL 283
+ YIAP Q YG ++ D +++GV+L E+L+G++ + + D L
Sbjct: 184 TPDYIAPEIIAYQ-PYGKSV------DWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 61 DNILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH 119
++I + +V+G G S V+ + +L+A+K + K E S EI +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHK 72
Query: 120 IRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYL 179
I+H NIV L + L+ +S ++ + YL
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 180 HHDCVPAILHRDVKCNNIL---LDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIA 236
H I+HRD+K N+L LD + ++DFGL+K+ + + +S G+ GY+A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 186
Query: 237 P 237
P
Sbjct: 187 P 187
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 72 VIGKGCSGVVYKAEMPNGELI-AVKKLWKT----KRDEEPVDSFAAEIQILGHIRHRNIV 126
VIGKG G V A E+ AVK L K K++E+ + + +L +++H +V
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI--MSERNVLLKNVKHPFLV 102
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI-AVGSAQGLAYLHHDCVP 185
L + +YI+ E R + A A L YLH
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAAEIASALGYLHSL--- 158
Query: 186 AILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQII 245
I++RD+K NILLDS+ L DFGL K + ++ S G+ Y+AP +++
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAP-----EVL 211
Query: 246 YGYTMNITEKSDVYSYGVVLLEILSG 271
+ + T D + G VL E+L G
Sbjct: 212 HKQPYDRT--VDWWCLGAVLYEMLYG 235
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 73/189 (38%), Gaps = 19/189 (10%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ +L + H NI+KL + +K L+ I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVA 229
G YLH I+HRD+K N+LL+SK L DFGL+ M
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERL 184
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
G+ YIAP + EK DV+S GV+L +L G Q I++ V
Sbjct: 185 GTAYYIAPEVLR--------KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQ--EILKRV 234
Query: 290 KKKMGSFEP 298
+K SF+P
Sbjct: 235 EKGKFSFDP 243
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 123/313 (39%), Gaps = 51/313 (16%)
Query: 59 TIDNILECLKD----ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEI 114
I N + LK+ E ++G G SG V G +AVK++ + D EI
Sbjct: 5 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-----DFCDIALMEI 59
Query: 115 QILGHIR-HRNIVKLLGYCSNKSVKLL-----LYNYISXXXXXXXXXXXXXXDWETRYK- 167
++L H N+++ YCS + + L L N + Y
Sbjct: 60 KLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 168 --IAVGSAQGLAYLHHDCVPAILHRDVKCNNILL--DSKYEA-----------YLADFGL 212
+ A G+A+LH I+HRD+K NIL+ S++ A ++DFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 213 AKLMNS--TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
K ++S + ++ +G+ G+ AP + +T D++S G V ILS
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 271 GRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVN 330
P GD + + + S + + D L ++ +M ++
Sbjct: 235 --KGKHP-FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM----------ID 281
Query: 331 SSPAERPTMKEVV 343
P +RPT +V+
Sbjct: 282 HDPLKRPTAMKVL 294
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 75 KGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGYCSN 134
K C+G Y A++ N KKL + RD + ++ E +I ++H NIV+L S
Sbjct: 25 KLCTGHEYAAKIIN-----TKKL--SARDHQKLER---EARICRLLKHSNIVRLHDSISE 74
Query: 135 KSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKC 194
+ L+++ ++ ++ + + Q L + H ++HRD+K
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 131
Query: 195 NNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMN 251
N+LL SK + LADFGLA + A AG+ GY++P + + YG +
Sbjct: 132 ENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKE-AYGKPV- 187
Query: 252 ITEKSDVYSYGVVLLEILSG 271
D+++ GV+L +L G
Sbjct: 188 -----DIWACGVILYILLVG 202
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++P + + ++ SD+++ G ++ ++++G
Sbjct: 201 VSPELLTEK-------SASKSSDLWALGCIIYQLVAG 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL-G 130
IG+G +G+V A E +G +AVK + R ++ + E+ I+ +H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y + + +L+ ++ + E + Q LAYLH ++HR
Sbjct: 111 YLVGEELWVLM-EFLQGGALTDIVSQVRLNE-EQIATVCEAVLQALAYLH---AQGVIHR 165
Query: 191 DVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
D+K ++ILL L+DFG ++ + G+ ++AP + ++
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX--LVGTPYWMAPE------VISRSL 217
Query: 251 NITEKSDVYSYGVVLLEILSG 271
TE D++S G++++E++ G
Sbjct: 218 YATE-VDIWSLGIMVIEMVDG 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 167 KIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMS 226
KIAV + L +LH +++HRDVK +N+L+++ + DFG++ + A
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV---AKD 194
Query: 227 RVAGSYGYIAPGKCKLQIIY-GYTMNITEKSDVYSYGVVLLEI 268
AG Y AP + ++ GY++ KSD++S G+ +E+
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSV----KSDIWSLGITXIEL 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 179 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 189 HRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGY 248
HRDVK NIL+ + AYL DFG+A + G+ Y AP +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ-LGNTVGTLYYXAPERFS------- 208
Query: 249 TMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD-----GLHIVEWVKK 291
+ T ++D+Y+ VL E L+G Q GD G HI + + +
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQ---GDQLSVXGAHINQAIPR 253
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 121 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 178 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPAFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKY-EAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
+GL +LH P I+HRD+KC+NI + + D GLA L ++ V G+
Sbjct: 140 KGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTP 194
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLE 267
+ AP Y E DVY++G LE
Sbjct: 195 EFXAPEX--------YEEKYDESVDVYAFGXCXLE 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYL---ADFGLAKLMNSTNYHHAMSRVAGS 231
G YLH I+HRD+K N+LL+SK L DFGL+ M G+
Sbjct: 116 GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGT 169
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
YIAP + EK DV+S GV+L +L G Q I++ V+K
Sbjct: 170 AYYIAPEVLR--------KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQ--EILKRVEK 219
Query: 292 KMGSFEP 298
SF+P
Sbjct: 220 GKFSFDP 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 119 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 176 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 120 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 177 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q + D++L+ +G G GVV++ E G A K + ++ ++
Sbjct: 146 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRK 203
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISX---XXXXXXXXXXXXXDWETRYKIA 169
EIQ + +RH +V L + + +++Y ++S D Y
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKY--EAYLADFGLAKLMNSTNYHHAMSR 227
V +GL ++H + +H D+K NI+ +K E L DFGL ++ ++
Sbjct: 264 V--CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---QSVKV 315
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
G+ + AP + + + YT D++S GV+ +LSG S
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYT-------DMWSVGVLSYILLSGLS 354
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 71 NVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
++IG G G V +A + ++A+KK+ + D EI IL + H ++VK+L
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQ------------GLA 177
K V+ Y+ D++ ++ V + G+
Sbjct: 119 DIVIPKDVEKFDELYV--------VLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 178 YLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKL-------------------MNS 218
Y+H ILHRD+K N L++ + DFGLA+ MN
Sbjct: 171 YVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 219 TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+ H + G++ + + N TE DV+S G + E+L+
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAA 112
Q + D++L+ +G G GVV++ E G A K + ++ ++
Sbjct: 40 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRK 97
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISX---XXXXXXXXXXXXXDWETRYKIA 169
EIQ + +RH +V L + + +++Y ++S D Y
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKY--EAYLADFGLAKLMNSTNYHHAMSR 227
V +GL ++H + +H D+K NI+ +K E L DFGL ++ ++
Sbjct: 158 V--CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---QSVKV 209
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
G+ + AP + + + YT D++S GV+ +LSG S
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYT-------DMWSVGVLSYILLSGLS 248
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 201 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 199 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++P + + + SD+++ G ++ ++++G
Sbjct: 201 VSPELLTEK-------SAXKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 202 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 202 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 199 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 199 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 48/307 (15%)
Query: 67 LKDENVIGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR-HRN 124
L+ V+ +G VY+A+ + +G A+K+L +EE + E+ + + H N
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPN 87
Query: 125 IVKLLGYCSNKSV----------KLLLYNYISXXXXXXXXXXXXXX---DWETRYKIAVG 171
IV+ +CS S+ + LL + +T KI
Sbjct: 88 IVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 172 SAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS-TNYHHAMSRVAG 230
+ + + ++H P I+HRD+K N+LL ++ L DFG A ++ +Y + R A
Sbjct: 145 TCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 231 SYGYIAPGKCKL----QIIYGYT-MNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHI 285
I + +II Y+ I EK D+++ G +L +L R Q DG +
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFR---QHPFEDGAKL 259
Query: 286 VEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVAL 345
I++ K P + +L AM VN P ER ++ EVV
Sbjct: 260 ---------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVN--PEERLSIAEVVHQ 302
Query: 346 LMEVKSA 352
L E+ +A
Sbjct: 303 LQEIAAA 309
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 201 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 201 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 201 VSP------------ELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 126 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 183 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFG-LAKLMNSTNYHHAMS 226
IA+ S L Y+H RD+K +NIL+D LADFG KLM +++
Sbjct: 186 IAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 227 RVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
G+ YI+P LQ + G + D +S GV + E+L G +
Sbjct: 237 --VGTPDYISPE--ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 147 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 204 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 176
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 177 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 176
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 177 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 219
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 199 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 52/253 (20%)
Query: 54 QKLNFTIDNILECLKDENVIGKGCSGVVY--KAEMPNG--ELIAVKKLWKTKRDEEPVDS 109
+KL + + K E+ IG+G VY A++ G E IA+K L T P+
Sbjct: 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPI-R 65
Query: 110 FAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA 169
AAE+Q L ++ V + YC K+ +++ + ++ +
Sbjct: 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA--MPYLEHESFLDILNSLSFQEVREYM 123
Query: 170 VGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNST--------- 219
+ + L +H I+HRDVK +N L + + + Y L DFGLA+ + T
Sbjct: 124 LNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 220 -----------------NYHHAMSRVAGSYGYIAP---GKCKLQIIYGYTMNITEKSDVY 259
+ ++ AG+ G+ AP KC N T D++
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCP---------NQTTAIDMW 231
Query: 260 SYGVVLLEILSGR 272
S GV+ L +LSGR
Sbjct: 232 SAGVIFLSLLSGR 244
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 57/314 (18%)
Query: 59 TIDNILECLKD----ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEI 114
I N + LK+ E ++G G SG V G +AVK++ + D EI
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-----DFCDIALMEI 77
Query: 115 QILGHIR-HRNIVKLLGYCSNKSVKLL-----LYNYISXXXXXXXXXXXXXXDWETRYK- 167
++L H N+++ YCS + + L L N + Y
Sbjct: 78 KLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 168 --IAVGSAQGLAYLHHDCVPAILHRDVKCNNILL--DSKYEA-----------YLADFGL 212
+ A G+A+LH I+HRD+K NIL+ S++ A ++DFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 213 AKLMNS--TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT-MNITEKSDVYSYGVVLLEIL 269
K ++S + ++ +G+ G+ AP +++ T +T D++S G V IL
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAP-----ELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 270 SGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCV 329
S P GD + + + S + + D L ++ +M +
Sbjct: 248 S--KGKHP-FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM----------I 294
Query: 330 NSSPAERPTMKEVV 343
+ P +RPT +V+
Sbjct: 295 DHDPLKRPTAMKVL 308
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 57/314 (18%)
Query: 59 TIDNILECLKD----ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEI 114
I N + LK+ E ++G G SG V G +AVK++ + D EI
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-----DFCDIALMEI 77
Query: 115 QILGHIR-HRNIVKLLGYCSNKSVKLL-----LYNYISXXXXXXXXXXXXXXDWETRYK- 167
++L H N+++ YCS + + L L N + Y
Sbjct: 78 KLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 168 --IAVGSAQGLAYLHHDCVPAILHRDVKCNNILL--DSKYEA-----------YLADFGL 212
+ A G+A+LH I+HRD+K NIL+ S++ A ++DFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 213 AKLMNS--TNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT-MNITEKSDVYSYGVVLLEIL 269
K ++S + ++ +G+ G+ AP +++ T +T D++S G V IL
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAP-----ELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 270 SGRSAVQPQIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCV 329
S P GD + + + S + + D L ++ +M +
Sbjct: 248 S--KGKHP-FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM----------I 294
Query: 330 NSSPAERPTMKEVV 343
+ P +RPT +V+
Sbjct: 295 DHDPLKRPTAMKVL 308
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 198 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH I+HRD+K NILL+ + DFG AK+++ + + G+ Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 235 IAPGKCKLQIIYGYTMNITEK-----SDVYSYGVVLLEILSG 271
++P +TEK SD+++ G ++ ++++G
Sbjct: 198 VSPEL------------LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 17/182 (9%)
Query: 62 NILECLKDENVIGKGC-SGVVYKAEMPNGELIAVKKLWKTK--RDEEPVDSFAAEIQILG 118
NI + V+G G S V + G+L A+K + K+ RD S EI +L
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD----SSLENEIAVLK 61
Query: 119 HIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY 178
I+H NIV L + + L+ +S + + + Y
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 179 LHHDCVPAILHRDVKCNNILL---DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
LH + I+HRD+K N+L + + + DFGL+K+ + MS G+ GY+
Sbjct: 122 LHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYV 174
Query: 236 AP 237
AP
Sbjct: 175 AP 176
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 58 FTIDNILECLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV-----DSFAA 112
F +N+ + +G G VV K + L K K +R + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL I+H N++ L NK+ +L+ ++ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNI-LLDS---KYEAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI LLD K + DFGLA + ++ + +
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL IRH NI+ L NK+ +L+ +S + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI+L K L DFG+A + + N +
Sbjct: 125 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNI 178
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +G+
Sbjct: 179 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGE 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 163 ETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSK-YEAYLADFGLAKLMNSTN 220
E R +G A +GL YLH ILH DVK +N+LL S A L DFG A +
Sbjct: 184 EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG 240
Query: 221 YHHAM---SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ ++AP +++ G + + K DV+S ++L +L+G
Sbjct: 241 LGKSLLTGDYIPGTETHMAP-----EVVLGRSCDA--KVDVWSSCCMMLHMLNG 287
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
EN IG+G G V K + G I A KK+ K E VD F EI+I+ + H NI++
Sbjct: 14 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
L + + L+ + +I +AY H V
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV--- 127
Query: 188 LHRDVKCNNILL-----DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
HRD+K N L DS + L DFGLA M G+ Y++P L
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGK---MMRTKVGTPYYVSPQ--VL 180
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +YG + D +S GV++ +L G
Sbjct: 181 EGLYG------PECDEWSAGVMMYVLLCG 203
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 168 IAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSR 227
I + A+ + +LH ++HRD+K +NI + DFGL M+ +
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 228 VAGSYG----------YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
+Y Y++P + I+G N + K D++S G++L E+L S
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQ-----IHGN--NYSHKVDIFSLGLILFELLYSFSTQME 278
Query: 278 QIGDGLHIVEWVKKKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERP 337
++ I+ V+ +L T+ MVQ+ML + SP ERP
Sbjct: 279 RV----RIITDVRNL------KFPLLFTQKYPQEHMMVQDML----------SPSPTERP 318
Query: 338 TMKEVV 343
+++
Sbjct: 319 EATDII 324
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL IRH NI+ L NK+ +L+ +S + +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI+L K L DFG+A + + N +
Sbjct: 118 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNI 171
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +G+
Sbjct: 172 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGE 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL LH + I++RD+K NILLD ++D GLA ++ RV G+ GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGY 351
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP K + YT + D ++ G +L E+++G+S Q
Sbjct: 352 MAPEVVKNE---RYTFS----PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL LH + I++RD+K NILLD ++D GLA ++ RV G+ GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGY 351
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP K + YT + D ++ G +L E+++G+S Q
Sbjct: 352 MAPEVVKNE---RYTFS----PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
EN IG+G G V K + G I A KK+ K E VD F EI+I+ + H NI++
Sbjct: 31 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 128 LLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAI 187
L + + L+ + +I +AY H V
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV--- 144
Query: 188 LHRDVKCNNILL-----DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
HRD+K N L DS + L DFGLA M G+ Y++P L
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGK---MMRTKVGTPYYVSPQ--VL 197
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +YG + D +S GV++ +L G
Sbjct: 198 EGLYG------PECDEWSAGVMMYVLLCG 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 130 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 183
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 184 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 216
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 217 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 255
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL IRH NI+ L NK+ +L+ +S + +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLAKLMNSTNYHHAMSRV 228
G+ YLH I H D+K NI+L K L DFG+A + + N +
Sbjct: 139 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNI 192
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ ++AP +I+ + + ++D++S GV+ +LSG S P +G+
Sbjct: 193 FGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGE 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 73 IGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLG- 130
+G+G GVV++A+ + A+K++ R E + E++ L + H IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 131 -YCSNKSVKLL-----LYNYISXXXXXXXXXXXXXXDW-------ETRYK-----IAVGS 172
N + KL +Y YI DW E R + I +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK----DWMNGRCTIEERERSVCLHIFLQI 127
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHH-------AM 225
A+ + +LH ++HRD+K +NI + DFGL M+ A
Sbjct: 128 AEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 226 SRVAGSYG---YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEIL 269
+R G G Y++P + I+G + + K D++S G++L E+L
Sbjct: 185 ARHTGQVGTKLYMSPEQ-----IHGNS--YSHKVDIFSLGLILFELL 224
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 184
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 185 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 217
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 218 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 256
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 180
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 181 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 213
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 214 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 252
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 184
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 185 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 217
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 218 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 185
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 186 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 218
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 219 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 257
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL +LH I++RD+K N+LLD ++D GLA + + AG+ G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGF 355
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP +++ G + + D ++ GV L E+++ R +
Sbjct: 356 MAP-----ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 185
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 186 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 218
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 219 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 257
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 73 IGKGCSGVVYK------AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+GKG VV + + ++I KKL + RD + ++ E +I ++H NIV
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLER---EARICRLLKHPNIV 84
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+L S + L+++ ++ ++ + + Q L + H
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG 141
Query: 187 ILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
++HRD+K N+LL SK + LADFGLA + A AG+ GY++P + +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLR-K 198
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSG 271
YG + D+++ GV+L +L G
Sbjct: 199 DPYGKPV------DLWACGVILYILLVG 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL +LH I++RD+K N+LLD ++D GLA + + AG+ G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGF 355
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP +++ G + + D ++ GV L E+++ R +
Sbjct: 356 MAP-----ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL +LH I++RD+K N+LLD ++D GLA + + AG+ G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGF 355
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP +++ G + + D ++ GV L E+++ R +
Sbjct: 356 MAP-----ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFR 390
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 185
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 186 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 218
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 219 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 257
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 227
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 228 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 260
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 261 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 299
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
GL +LH I++RD+K N+LLD ++D GLA + + AG+ G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGF 355
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQ 276
+AP +++ G + + D ++ GV L E+++ R +
Sbjct: 356 MAP-----ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFR 390
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 199
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 200 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 232
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 233 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 201 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 233
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 234 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 212
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 213 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 245
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 246 EEII--RGQVFFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 284
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 154 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 207
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 208 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 240
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 241 EEII--RGQVFFRQRVSXECQHL--IRWCLALRPSDRPTFEEI 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 227
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G + H E ++ ++ F
Sbjct: 228 IRYHRYHGRS------AAVWSLGILLYDMVCGDIPFE-------HDEEIIRGQV-FFRQR 273
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
VS Q +++ +C+ P++RPT +E+
Sbjct: 274 VS-----------SECQHLIR------WCLALRPSDRPTFEEI 299
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 166 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 219
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G + H E ++ ++ F
Sbjct: 220 IRYHRYHGRS------AAVWSLGILLYDMVCGDIPFE-------HDEEIIRGQV-FFRQR 265
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
VS Q +++ +C+ P++RPT +E+
Sbjct: 266 VS-----------SECQHLIR------WCLALRPSDRPTFEEI 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 201 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 233
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 234 EEII--RGQVFFRQRVSXECQHL--IRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 199
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 200 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 232
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 233 EEII--RGQVFFRQRVSXECQHL--IRWCLALRPSDRPTFEEI 271
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 179 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 232
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G + H E ++ ++ F
Sbjct: 233 IRYHRYHGRS------AAVWSLGILLYDMVCGDIPFE-------HDEEIIRGQV-FFRQR 278
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
VS Q +++ +C+ P++RPT +E+
Sbjct: 279 VS-----------XECQHLIR------WCLALRPSDRPTFEEI 304
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 227
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G + H E ++ ++ F
Sbjct: 228 IRYHRYHGRS------AAVWSLGILLYDMVCGDIPFE-------HDEEIIRGQV-FFRQR 273
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
VS Q +++ +C+ P++RPT +E+
Sbjct: 274 VS-----------XECQHLIR------WCLALRPSDRPTFEEI 299
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 200
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 201 IRYHRYHGRS------AAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 213
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 214 IRYHRYHGRS------AAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 212
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 213 IRYHRYHGRS------AAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 212
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 213 IRYHRYHGRS------AAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 213
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 214 IRYHRYHGRS------AAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 213
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 214 IRYHRYHGRS------AAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 212
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 213 IRYHRYHGRS------AAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 213
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ +G + + V+S G++L +++ G
Sbjct: 214 IRYHRYHGRS------AAVWSLGILLYDMVCG 239
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 163 ETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSK-YEAYLADFGLAKLMNSTN 220
E R +G A +GL YLH ILH DVK +N+LL S A L DFG A +
Sbjct: 165 EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG 221
Query: 221 YHHAM---SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ + G+ ++AP +++ G + + K DV+S ++L +L+G
Sbjct: 222 LGKDLLTGDYIPGTETHMAP-----EVVLGRSCDA--KVDVWSSCCMMLHMLNG 268
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 181 HDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
H+C +LHRD+K NIL+D ++ E L DFG L+ T Y + G+ Y P
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEW 180
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEPA 299
+ +G + + V+S G++L +++ G FE
Sbjct: 181 IRYHRYHGRS------AAVWSLGILLYDMVCGDIP---------------------FEHD 213
Query: 300 VSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
I+ ++ Q V Q L +C+ P++RPT +E+
Sbjct: 214 EEIIGGQV--FFRQRVSSECQHL--IRWCLALRPSDRPTFEEI 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 73 IGKGCSGVVYKAE-MPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLLGY 131
+G+G V E + +G A+K++ ++ + A++ L H NI++L+ Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAY 94
Query: 132 C-----SNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIA---VGSAQGLAYLHHDC 183
C + LLL + ++ T +I +G +GL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--- 151
Query: 184 VPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
HRD+K NILL + + L D G MN H SR A + A +C +
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 244 I----IYGYTMN--ITEKSDVYSYGVVLLEILSG 271
++ + I E++DV+S G VL ++ G
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 71 NVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEP---VDSFAAEIQILGHIRHRNIV 126
VIGKG VV + G+ AVK + K P + E I ++H +IV
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------QGLAYLH 180
+LL S+ + +++ ++ D Y AV S + L Y H
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHYMRQILEALRYCH 149
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+ I+HRDVK + +LL SK + L FG+A + + A RV G+ ++AP
Sbjct: 150 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRV-GTPHFMAP 204
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
K + YG + DV+ GV+L +LSG
Sbjct: 205 EVVKRE-PYGKPV------DVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 71 NVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEP---VDSFAAEIQILGHIRHRNIV 126
VIGKG VV + G+ AVK + K P + E I ++H +IV
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA------QGLAYLH 180
+LL S+ + +++ ++ D Y AV S + L Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHYMRQILEALRYCH 147
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
+ I+HRDVK + +LL SK + L FG+A + + A RV G+ ++AP
Sbjct: 148 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRV-GTPHFMAP 202
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
K + YG + DV+ GV+L +LSG
Sbjct: 203 EVVKRE-PYGKPV------DVWGCGVILFILLSG 229
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 163 ETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSK-YEAYLADFGLAKLMNSTN 220
E R +G A +GL YLH ILH DVK +N+LL S A L DFG A +
Sbjct: 149 EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205
Query: 221 YHHAM---SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ ++AP +++ G + K D++S ++L +L+G
Sbjct: 206 LGKSLLTGDYIPGTETHMAP-----EVVMGKPCDA--KVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 163 ETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSK-YEAYLADFGLAKLMNSTN 220
E R +G A +GL YLH ILH DVK +N+LL S A L DFG A +
Sbjct: 165 EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 221
Query: 221 YHHAM---SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ ++AP +++ G + K D++S ++L +L+G
Sbjct: 222 LGKSLLTGDYIPGTETHMAP-----EVVMGKPCDA--KVDIWSSCCMMLHMLNG 268
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K +N+LLD LADFG MN + S G+ YI+P LQ +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPE--ILQAMED 253
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRS 273
+ D +S GV + E+L G +
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 65 ECLKDENVIGKGCSGVV-YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH--IR 121
E +KD IG G GV + + EL+AVK + + ++ +E V +I+ H +R
Sbjct: 21 ELVKD---IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR-----EIINHRSLR 72
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NIV+ + ++ Y S + G++Y H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH- 131
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
+ HRD+K N LLD L DFG +K S+ H G+ YIAP
Sbjct: 132 --AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP-- 184
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + Y + +DV+S GV L +L G
Sbjct: 185 -EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K +N+LLD LADFG MN + S G+ YI+P LQ +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPE--ILQAMED 269
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRS 273
+ D +S GV + E+L G +
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 163 ETRYKIAVGSA-QGLAYLHHDCVPAILHRDVKCNNILLDSK-YEAYLADFGLAKLMNSTN 220
E R +G A +GL YLH ILH DVK +N+LL S A L DFG A +
Sbjct: 163 EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 219
Query: 221 YHHAM---SRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + G+ ++AP +++ G + K D++S ++L +L+G
Sbjct: 220 LGKSLLTGDYIPGTETHMAP-----EVVMGKPCDA--KVDIWSSCCMMLHMLNG 266
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 65 ECLKDENVIGKGCSGV--VYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH--I 120
E +KD IG G GV + + + N EL+AVK + + ++ +E V +I+ H +
Sbjct: 22 ELVKD---IGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDENVKR-----EIINHRSL 72
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH 180
RH NIV+ + ++ Y S + G++Y H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 181 HDCVPAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
+ HRD+K N LLD L ADFG +K ++ H G+ YIAP
Sbjct: 133 ---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAP- 185
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ L+ Y + +DV+S GV L +L G
Sbjct: 186 EVLLKKEYDGKV-----ADVWSCGVTLYVMLVG 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 14/173 (8%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTK--RD---EEP-VDSFAAEIQILGHIRHRNI 125
+G G G V+ A + + + VK + K K D E+P + EI IL + H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 126 VKLLGYCSNKSV-KLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
+K+L N+ +L++ + S D I + YL +
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---L 148
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAP 237
I+HRD+K NI++ + L DFG A + + G+ Y AP
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF---CGTIEYCAP 198
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 69 DENVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVK 127
D +G G +G+V+ A + + +A+KK+ T D + V EI+I+ + H NIVK
Sbjct: 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVK 72
Query: 128 LL--------------GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA 173
+ G + + ++ Y+ + + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQL--L 130
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHA-MSRVAGS 231
+GL Y+H V LHRD+K N+ ++++ + DFGLA++M+ H +S +
Sbjct: 131 RGLKYIHSANV---LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 232 YGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
Y +P + N T+ D+++ G + E+L+G++
Sbjct: 188 KWYRSPR------LLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 37/237 (15%)
Query: 70 ENVIGKGCSGVVYKAEMPNGEL-IAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+++IG+G G VY A N E +A+KK+ + D EI IL ++ I++L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 129 LGYCSNKSV----KLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
+ +L + I+ E I G ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES-- 148
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNS--------------------TNYHHA 224
I+HRD+K N LL+ + DFGLA+ +NS N
Sbjct: 149 -GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 225 MSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
++ + Y AP LQ N T+ D++S G + E+L + +Q I D
Sbjct: 208 LTSHVVTRWYRAPELILLQ------ENYTKSIDIWSTGCIFAELL---NMLQSHIND 255
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 73 IGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFA-AEIQILGHIRHRNIVKLLG 130
+G+G G VYKA + E +A+K++ + + +EE V A E+ +L ++HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLH-HDCVPAILH 189
+ L++ Y + G+ + H C LH
Sbjct: 101 VIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC----LH 155
Query: 190 RDVKCNNILL---DSKYEAYL--ADFGLAK 214
RD+K N+LL D+ L DFGLA+
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 36/170 (21%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLD-SKYEAYLADFGLAKLMNSTNYHHAMSRVAGSY 232
Q L + H +LHRD+K NIL+D ++ E L DFG L+ T Y + G+
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTR 173
Query: 233 GYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKK 292
Y P + +G + + V+S G++L +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRS------AAVWSLGILLYDMVCGDIP------------------ 209
Query: 293 MGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEV 342
FE I+ + Q Q V Q L +C+ P++RPT +E+
Sbjct: 210 ---FEHDEEII--RGQVFFRQRVSXECQHL--IRWCLALRPSDRPTFEEI 252
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 71 NVIGKGCSGVVYKA-EMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIR-HRNIVKL 128
++G+G V A + NG+ AVK + K+ E++ L + ++NI++L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 129 LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAIL 188
+ + + + L++ + + ++ A L +LH I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 189 HRDVKCNNILLDSKYEAY---LADFGLA---KLMNSTN--YHHAMSRVAGSYGYIAPGKC 240
HRD+K NIL +S + + DF L KL NS ++ GS Y+AP
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP--- 190
Query: 241 KLQIIYGYTMNIT---EKSDVYSYGVVLLEILSG 271
+++ +T T ++ D++S GVVL +LSG
Sbjct: 191 --EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 8/174 (4%)
Query: 70 ENVIGKGCSGVVYKAEMPNG-ELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL 128
+++IG+G G VY A N + +A+KK+ + D EI IL ++ I++L
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 129 LGYCSNKSV----KLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCV 184
+ + +L + I+ + I G ++H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHES-- 150
Query: 185 PAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPG 238
I+HRD+K N LL+ + DFGLA+ +NS H ++ + PG
Sbjct: 151 -GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 186 AILHRDVKCNNILL---DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKL 242
++HRD+K N+L + E + DFG A+L N + + Y AP +L
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAP---EL 180
Query: 243 QIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQ-----IGDGLHIVEWVKKKMGSFE 297
GY E D++S GV+L +LSG+ Q + I++ +KK SFE
Sbjct: 181 LNQNGYD----ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 108 DSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYK 167
D F E+QI+ I++ + G +N ++Y Y+ D
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 168 IAV--------GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNST 219
I + +Y+H++ I HRDVK +NIL+D L+DFG ++ M
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM--- 202
Query: 220 NYHHAMSRVAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVL 265
+ G+Y ++ P + Y K D++S G+ L
Sbjct: 203 -VDKKIKGSRGTYEFMPPEFFSNESSYN-----GAKVDIWSLGICL 242
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H N++ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 73 IGKGCSGVVYKA-EMPNGE-----LIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
+GKG VV + ++ G+ +I KKL + RD + ++ E +I ++H NIV
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLER---EARICRLLKHPNIV 73
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
+L S + L+++ ++ ++ + + Q L + H
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG 130
Query: 187 ILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQ 243
++HR++K N+LL SK + LADFGLA + A AG+ GY++P + +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLR-K 187
Query: 244 IIYGYTMNITEKSDVYSYGVVLLEILSG 271
YG + D+++ GV+L +L G
Sbjct: 188 DPYGKPV------DLWACGVILYILLVG 209
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H N++ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 28/217 (12%)
Query: 71 NVIGKGCSGVVYKAEM--PNGELI--AVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V +A++ +G + AVK L ++ F E + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 127 KLLGYCSNKSVK------LLLYNYISXXXXXXXXXXXXXXD------WETRYKIAVGSAQ 174
KL+G K +++ ++ + +T + V A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
G+ YL +HRD+ N +L +ADFGL++ + S +Y+ G
Sbjct: 149 GMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ--------GC 197
Query: 235 IAPGKCKLQIIYGYTMNI-TEKSDVYSYGVVLLEILS 270
+ K + N+ T SDV+++GV + EI++
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 22/204 (10%)
Query: 73 IGKGCSGVV-YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH--IRHRNIVKLL 129
IG G GV + EL+AVK + + +E V + +I+ H +RH NIV+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENV-----QREIINHRSLRHPNIVRFK 82
Query: 130 GYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILH 189
+ ++ Y S + G++Y H I H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS---MQICH 139
Query: 190 RDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
RD+K N LLD L DFG +K S+ H G+ YIAP Q G
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196
Query: 248 YTMNITEKSDVYSYGVVLLEILSG 271
+ +DV+S GV L +L G
Sbjct: 197 ------KIADVWSCGVTLYVMLVG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H N++ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H N++ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
+++G+G + V++ G+L A+K ++ PVD E ++L + H+NIVKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 130 GYCSNKSV--KLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQGLAYLHHDCVP 185
+ K+L+ + E+ + I + G ++H
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG--GMNHLREN 131
Query: 186 AILHRDVKCNNILL----DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
I+HR++K NI+ D + L DFG A+ + + G+ Y+ P +
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYE 188
Query: 242 LQII-------YGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
++ YG T+ D++S GV +G +P
Sbjct: 189 RAVLRKDHQKKYGATV------DLWSIGVTFYHAATGSLPFRP 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H NI+ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 176 LAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYI 235
LA+LH ++H DVK NI L + L DFGL + + A G Y+
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYM 223
Query: 236 APGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGS 295
AP LQ YG +DV+S G+ +LE+ P G+G W + + G
Sbjct: 224 APE--LLQGSYGTA------ADVFSLGLTILEVACNMEL--PHGGEG-----WQQLRQGY 268
Query: 296 FEPAVS 301
P +
Sbjct: 269 LPPEFT 274
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH + +++RD+K N++LD + DFGL K M G+ Y
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 318
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 319 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH + +++RD+K N++LD + DFGL K M G+ Y
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 315
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 316 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 346
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 113 EIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
E+ IL + H N++ L N++ +L+ +S E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKY----EAYLADFGLA-KLMNSTNYHHAMSR 227
G+ YLH I H D+K NI+L K L DFGLA ++ + + +
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---- 177
Query: 228 VAGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
+ G+ ++AP +I+ + + ++D++S GV+ +LSG S P +GD
Sbjct: 178 IFGTPEFVAP-----EIVNYEPLGL--EADMWSIGVITYILLSGAS---PFLGD 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 21/210 (10%)
Query: 65 ECLKDENVIGKGCSGVV-YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHR 123
E +KD IG G GV + + EL+AVK + +R E+ + EI +RH
Sbjct: 22 ELVKD---IGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIAANVKREIINHRSLRHP 75
Query: 124 NIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDC 183
NIV+ + ++ Y S + G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH--- 132
Query: 184 VPAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
+ HRD+K N LLD L DFG +K S+ H G+ YIAP +
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP---E 186
Query: 242 LQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ + Y + +DV+S GV L +L G
Sbjct: 187 VLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 135
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 136 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 186
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 239
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 240 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 276
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 76 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 131
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 132 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 182
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 235
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 236 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 272
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 71 NVIGKGCSGVVYKAEMP-NGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKLL 129
+++G+G + V++ G+L A+K ++ PVD E ++L + H+NIVKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 130 GYCSNKSV--KLLLYNYISXXXXXXXXXXXXXXDW--ETRYKIAVGSAQGLAYLHHDCVP 185
+ K+L+ + E+ + I + G ++H
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG--GMNHLREN 131
Query: 186 AILHRDVKCNNILL----DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCK 241
I+HR++K NI+ D + L DFG A+ + + G+ Y+ P +
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---EQFVXLYGTEEYLHPDMYE 188
Query: 242 LQII-------YGYTMNITEKSDVYSYGVVLLEILSGRSAVQP 277
++ YG T+ D++S GV +G +P
Sbjct: 189 RAVLRKDHQKKYGATV------DLWSIGVTFYHAATGSLPFRP 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 73
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 74 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 131
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K + M G+ Y+AP + Y
Sbjct: 132 -VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLE-DNDY 187
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 188 GRAV------DWWGLGVVMYEMMCGR 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 23/224 (10%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAA--EIQILGHIRHRNIVKLLG 130
+G G GVV++ + V K T P+D + EI I+ + H ++ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSA-QGLAYLHHDCVPAILH 189
+K +L+ ++S E + A +GL ++H +I+H
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVH 172
Query: 190 RDVKCNNILLDSKYEAYLA--DFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
D+K NI+ ++K + + DFGLA +N + A + AP + +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPVGF 229
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKK 291
YT D+++ GV+ +LSG S + D L ++ VK+
Sbjct: 230 YT-------DMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKR 264
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 151
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 152 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 202
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 255
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 256 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 292
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH +++RD+K N++LD + DFGL K + M G+ Y
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 172 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 202
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 151
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 152 DLKPANFLIVDGMLK--LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK-------D 202
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 255
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 256 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 292
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 71
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 72 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 129
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K + M G+ Y+AP + Y
Sbjct: 130 -VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE-DNDY 185
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 186 GRAV------DWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 68
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 126
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K + M G+ Y+AP + Y
Sbjct: 127 -VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE-DNDY 182
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 183 GRAV------DWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 68
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 126
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K + M G+ Y+AP + Y
Sbjct: 127 -VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE-DNDY 182
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 183 GRAV------DWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 68
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 126
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K S M G+ Y+AP + Y
Sbjct: 127 -VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKXFCGTPEYLAPEVLE-DNDY 182
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 183 GRAV------DWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 18/206 (8%)
Query: 71 NVIGKGCSG-VVYKAEMPNGELIAVKKLWKT---KRDEEPVDSFAAEIQILGHIRHRNIV 126
++GKG G V+ E G A+K L K +DE V E ++L + RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLT 68
Query: 127 KLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPA 186
L + Y + E L YLH V
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-- 126
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
++RD+K N++LD + DFGL K + M G+ Y+AP + Y
Sbjct: 127 -VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLE-DNDY 182
Query: 247 GYTMNITEKSDVYSYGVVLLEILSGR 272
G + D + GVV+ E++ GR
Sbjct: 183 GRAV------DWWGLGVVMYEMMCGR 202
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 180 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 230
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 283
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 284 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 125 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPC 178
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 179 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 232 RIRMGQYE 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH + +++RD+K N++LD + DFGL K M G+ Y
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 177
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 178 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 208
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 65 ECLKDENVIGKGCSGVV-YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH--IR 121
E +KD IG G GV + + EL+AVK + + ++ +E V +I+ H +R
Sbjct: 22 ELVKD---IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR-----EIINHRSLR 73
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NIV+ + ++ Y S + G++Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH- 132
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
+ HRD+K N LLD L FG +K S+ H G+ YIAP +
Sbjct: 133 --AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAP-E 186
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
L+ Y + +DV+S GV L +L G
Sbjct: 187 VLLKKEYDGKV-----ADVWSCGVTLYVMLVG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 132 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 185
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 186 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 238
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 239 RIRMGQYE 246
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH + +++RD+K N++LD + DFGL K M G+ Y
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 175
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 176 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 206
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 131 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 184
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 185 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 237
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 238 RIRMGQYE 245
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 175 GLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGY 234
L YLH + +++RD+K N++LD + DFGL K M G+ Y
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 176
Query: 235 IAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGR 272
+AP + YG + D + GVV+ E++ GR
Sbjct: 177 LAPEVLE-DNDYGRAV------DWWGLGVVMYEMMCGR 207
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 23/113 (20%)
Query: 174 QGLAYLHHDCVPAILHRDVKCNNILLDSKY---EAYLADFGLAKLMNSTNYHHA--MSRV 228
+G+ YLH + I+H D+K NILL S Y + + DFG+++ + HA + +
Sbjct: 142 EGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-----HACELREI 193
Query: 229 AGSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGD 281
G+ Y+AP I Y IT +D+++ G++ +L+ S P +G+
Sbjct: 194 MGTPEYLAPE------ILNYD-PITTATDMWNIGIIAYMLLTHTS---PFVGE 236
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 65 ECLKDENVIGKGCSGVV-YKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGH--IR 121
E +KD IG G GV + + EL+AVK + + ++ +E V +I+ H +R
Sbjct: 22 ELVKD---IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR-----EIINHRSLR 73
Query: 122 HRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
H NIV+ + ++ Y S + G++Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH- 132
Query: 182 DCVPAILHRDVKCNNILLDSKYEAYL--ADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGK 239
+ HRD+K N LLD L FG +K S+ H G+ YIAP
Sbjct: 133 --AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAP-- 185
Query: 240 CKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
++ + Y + +DV+S GV L +L G
Sbjct: 186 -EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 133 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 186
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 187 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 239
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 240 RIRMGQYE 247
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 125 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 178
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 179 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 232 RIRMGQYE 239
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 77 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 132
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 133 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 183
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 236
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 237 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 273
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 126 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 179
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 180 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 232
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 233 RIRMGQYE 240
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 127 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 180
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 181 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 234 RIRMGQYE 241
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 171 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 224
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 225 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 278 RIRMGQYE 285
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 47/222 (21%)
Query: 73 IGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL--- 128
+G G G V + GE +A+K+ + + + + + EIQI+ + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 129 ----------------LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
+ YC ++ L + + D + S
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD--------ISS 132
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVA 229
A L YLH + I+HRD+K NI+L + + D G AK ++ +
Sbjct: 133 A--LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 184
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP +L YT+ + D +S+G + E ++G
Sbjct: 185 GTLQYLAP---ELLEQKKYTVTV----DYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 47/222 (21%)
Query: 73 IGKGCSGVVYK-AEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRNIVKL--- 128
+G G G V + GE +A+K+ + + + + + EIQI+ + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 129 ----------------LGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGS 172
+ YC ++ L + + D + S
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD--------ISS 133
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRVA 229
A L YLH + I+HRD+K NI+L + + D G AK ++ +
Sbjct: 134 A--LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 185
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
G+ Y+AP +L YT+ + D +S+G + E ++G
Sbjct: 186 GTLQYLAP---ELLEQKKYTVTV----DYWSFGTLAFECITG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 127 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 180
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 181 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 234 RIRMGQYE 241
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 141 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 194
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 195 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 247
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 248 RIRMGQYE 255
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 177 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 230
Query: 230 GSYGYIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWV 289
+ Y+AP + G + D++S GV++ +L G G +
Sbjct: 231 YTPYYVAPE------VLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 283
Query: 290 KKKMGSFE 297
+ +MG +E
Sbjct: 284 RIRMGQYE 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 180 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-------D 230
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 283
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 284 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + +AG+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLAGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAA--EIQILGHIRHRNIVKLLG 130
+G+G G VYKA+ + K + K+ E S +A EI +L ++H N++ L
Sbjct: 29 VGRGTYGHVYKAKR---KDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQK 85
Query: 131 -YCSNKSVKL-LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY-----LHHDC 183
+ S+ K+ LL++Y + ++ G + L Y +H+
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 184 VPAILHRDVKCNNILL----DSKYEAYLADFGLAKLMNSTNYHHA-MSRVAGSYGYIAPG 238
+LHRD+K NIL+ + +AD G A+L NS A + V ++ Y AP
Sbjct: 146 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP- 204
Query: 239 KCKLQIIYGYTMNITEKSDVYSYGVVLLEILS 270
+++ G + T+ D+++ G + E+L+
Sbjct: 205 ----ELLLG-ARHYTKAIDIWAIGCIFAELLT 231
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 43/286 (15%)
Query: 73 IGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQILGHIRHRN--IVKLLG 130
IG G S V++ ++ A+K + + D + +DS+ EI L ++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 131 YCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHR 190
Y ++ + WE R + + +H I+H
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 191 DVKCNNILL-DSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
D+K N L+ D + L DFG+A M G+ Y+ P K
Sbjct: 180 DLKPANFLIVDGMLK--LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK-------D 230
Query: 250 MNITEKS-----------DVYSYGVVLLEILSGRSAVQPQIGDGLHIVEWVKKKMGSFEP 298
M+ + ++ DV+S G +L + G++ Q I+ + K +P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-------QIINQISKLHAIIDP 283
Query: 299 AVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVA 344
I + +P++ +Q++L+ C+ P +R ++ E++A
Sbjct: 284 NHEI---EFPDIPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 30/202 (14%)
Query: 77 CSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQIL-GHIRHRNIVKLLG-YCSN 134
C V+KA N E AVK + K+KRD + EI+IL + +H NI+ L Y
Sbjct: 43 CKRCVHKAT--NMEY-AVKVIDKSKRDP------SEEIEILLRYGQHPNIITLKDVYDDG 93
Query: 135 KSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKI-AVGSAQGLAYLHHDCVPAILHRDVK 193
K V L+ + E + + +G + YLH ++HRD+K
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT--VEYLHSQ---GVVHRDLK 148
Query: 194 CNNIL-LDSKYEA---YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYT 249
+NIL +D + DFG AK + + N + + ++AP K Q GY
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQ---GY- 202
Query: 250 MNITEKSDVYSYGVVLLEILSG 271
E D++S G++L +L+G
Sbjct: 203 ---DEGCDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 77 CSGVVYKAEMPNGELIAVKKLWKTKRDEEPVDSFAAEIQIL-GHIRHRNIVKLLG-YCSN 134
C V+KA N E AVK + K+KRD + EI+IL + +H NI+ L Y
Sbjct: 43 CKRCVHKAT--NMEY-AVKVIDKSKRDP------SEEIEILLRYGQHPNIITLKDVYDDG 93
Query: 135 KSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKC 194
K V L+ + E + + + + YLH ++HRD+K
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-IGKTVEYLHSQ---GVVHRDLKP 149
Query: 195 NNIL-LDSKYEA---YLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYGYTM 250
+NIL +D + DFG AK + + N + + ++AP K Q GY
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQ---GY-- 202
Query: 251 NITEKSDVYSYGVVLLEILSG 271
E D++S G++L +L+G
Sbjct: 203 --DEGCDIWSLGILLYTMLAG 221
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + +ADFG AK + + + G+ Y+AP ++ +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 214
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 215 GYNKAV----DWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + +ADFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + +ADFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + +ADFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 30/220 (13%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV----DSFAA-----EIQILGHI 120
+ I G G V G +A+K+++ T D V DSF EI++L H
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY-- 178
H NI+ L + + Y+ + R I+ Q Y
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYFMYHI 143
Query: 179 ---LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK--LMNSTNYHHAMSRVAGSYG 233
LH ++HRD+ NILL + + DF LA+ ++ H+ R
Sbjct: 144 LLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR-----W 198
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
Y AP +++ + T+ D++S G V+ E+ + ++
Sbjct: 199 YRAP-----ELVMQFK-GFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 30/220 (13%)
Query: 70 ENVIGKGCSGVVYKAEMPNGELIAVKKLWKTKRDEEPV----DSFAA-----EIQILGHI 120
+ I G G V G +A+K+++ T D V DSF EI++L H
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 121 RHRNIVKLLGYCSNKSVKLLLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAY-- 178
H NI+ L + + Y+ + R I+ Q Y
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYFMYHI 143
Query: 179 ---LHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAK--LMNSTNYHHAMSRVAGSYG 233
LH ++HRD+ NILL + + DF LA+ ++ H+ R
Sbjct: 144 LLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR-----W 198
Query: 234 YIAPGKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSGRS 273
Y AP +++ + T+ D++S G V+ E+ + ++
Sbjct: 199 YRAP-----ELVMQFK-GFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 186 AILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAM-----SRVAGSYGYIAP 237
+ LHRD+K +N L+ A Y+ DFGLAK T+ H + + G+ Y +
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYAS- 181
Query: 238 GKCKLQIIYGYTMNITEKSDVYSYGVVLLEILSG 271
+ + + + D+ S G VL+ L G
Sbjct: 182 ------VNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 188 LHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIYG 247
+HRD+K +NILLD LADFG + + ++ V G+ Y++P +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGP 242
Query: 248 YTMNITEKSDVYSYGVVLLEILSGRS 273
T + + D ++ GV E+ G++
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQT 268
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+++D + + DFGLAK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAY---LADFGLAKLMNSTNYHHAMSRV- 228
A L +LH+ I HRD+K NIL + + + DFGL + +S
Sbjct: 121 ASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 229 ----AGSYGYIAPGKCKLQIIYGYTMNIT---EKSDVYSYGVVLLEILSG 271
GS Y+AP +++ ++ + ++ D++S GV+L +LSG
Sbjct: 178 LLTPCGSAEYMAP-----EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW-----TLCGTPEYLAP---EIILSK 234
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 235 GYNKAV----DWWALGVLIYEMAAG 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+++D + + DFGLAK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 234
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 235 GYNKAV----DWWALGVLIYEMAAG 255
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 173 AQGLAYLHHDCVPAILHRDVKCNNILLDSKYEA---YLADFGLAKLMNSTNYHHAMSRVA 229
+ + YLH I HRDVK N+L SK L DFG AK T H++++
Sbjct: 171 GEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPC 224
Query: 230 GSYGYIAP 237
+ Y+AP
Sbjct: 225 YTPYYVAP 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 214
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 215 GYNKAV----DWWALGVLIYEMAAG 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLXGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 143
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 144 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 191
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 144
Query: 182 DCVPAILHRDVKCNNILLDSKYEA-YLADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 145 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 192
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 214
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 215 GYNKAV----DWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 214
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 215 GYNKAV----DWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 163
Query: 182 DCVPAILHRDVKCNNILLDSKYEA-YLADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 164 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 211
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 124 NIVKLLGYCSNKSVKL--LLYNYISXXXXXXXXXXXXXXDWETRYKIAVGSAQGLAYLHH 181
NIVKLL ++ K L++ Y++ D++ RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT--DYDIRYYI-YELLKALDYCH- 142
Query: 182 DCVPAILHRDVKCNNILLDSKYEAY-LADFGLAKLMNSTNYHHAMSRVAGSY 232
I+HRDVK +N+++D + L D+GLA+ + ++ RVA Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRY 190
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 208
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 209 GYNKAV----DWWALGVLIYEMAAG 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+++D + + DFG AK + + + G+ Y+AP ++ I
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIIISK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 187 ILHRDVKCNNILLDSKYEAYLADFGLAKLMNSTNYHHAMSRVAGSYGYIAPGKCKLQIIY 246
+++RD+K N+L+D + + DFG AK + + + G+ Y+AP ++ +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP---EIILSK 213
Query: 247 GYTMNITEKSDVYSYGVVLLEILSG 271
GY + D ++ GV++ E+ +G
Sbjct: 214 GYNKAV----DWWALGVLIYEMAAG 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,590,748
Number of Sequences: 62578
Number of extensions: 411963
Number of successful extensions: 3454
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 1346
Number of HSP's gapped (non-prelim): 1371
length of query: 371
length of database: 14,973,337
effective HSP length: 100
effective length of query: 271
effective length of database: 8,715,537
effective search space: 2361910527
effective search space used: 2361910527
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)