Query 037949
Match_columns 243
No_of_seqs 240 out of 2189
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 06:01:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037949.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037949hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0499 SAM1 S-adenosylhomocys 100.0 4.1E-59 8.9E-64 411.9 13.7 240 2-243 142-414 (420)
2 KOG1370 S-adenosylhomocysteine 100.0 4.3E-59 9.2E-64 404.0 13.1 239 2-242 147-419 (434)
3 PLN02494 adenosylhomocysteinas 100.0 6.5E-54 1.4E-58 396.7 18.7 241 2-243 187-463 (477)
4 TIGR00936 ahcY adenosylhomocys 100.0 3.9E-52 8.4E-57 381.8 19.4 240 2-243 128-400 (406)
5 PRK05476 S-adenosyl-L-homocyst 100.0 3.1E-51 6.8E-56 377.7 18.4 240 2-243 145-417 (425)
6 PTZ00075 Adenosylhomocysteinas 100.0 6.7E-51 1.5E-55 377.4 19.0 241 2-243 187-462 (476)
7 cd00401 AdoHcyase S-adenosyl-L 100.0 2.7E-50 5.9E-55 370.6 21.2 240 2-243 135-407 (413)
8 PF00670 AdoHcyase_NAD: S-aden 100.0 1.5E-33 3.3E-38 228.0 13.0 162 42-205 1-162 (162)
9 PF02826 2-Hacid_dh_C: D-isome 99.7 3.2E-16 6.9E-21 129.8 13.1 127 37-164 9-139 (178)
10 PF05221 AdoHcyase: S-adenosyl 99.7 7.8E-18 1.7E-22 145.6 3.1 40 2-41 143-187 (268)
11 KOG0024 Sorbitol dehydrogenase 99.7 2.3E-16 5E-21 139.3 11.7 145 50-201 158-319 (354)
12 COG1052 LdhA Lactate dehydroge 99.6 1.2E-14 2.6E-19 130.9 12.8 148 15-164 77-248 (324)
13 COG0111 SerA Phosphoglycerate 99.6 8.8E-15 1.9E-19 131.8 11.0 116 46-164 125-245 (324)
14 PRK15409 bifunctional glyoxyla 99.6 6.4E-14 1.4E-18 126.3 13.6 102 61-164 142-248 (323)
15 COG1063 Tdh Threonine dehydrog 99.5 5.4E-14 1.2E-18 128.1 12.7 131 62-197 167-314 (350)
16 PRK08410 2-hydroxyacid dehydro 99.5 8.5E-14 1.8E-18 125.0 13.5 99 61-164 142-244 (311)
17 PRK06487 glycerate dehydrogena 99.5 2.3E-13 4.9E-18 122.5 12.3 97 61-164 145-245 (317)
18 PRK06932 glycerate dehydrogena 99.5 6.2E-13 1.3E-17 119.6 13.4 98 61-164 144-245 (314)
19 PRK07574 formate dehydrogenase 99.5 5.8E-13 1.3E-17 122.5 12.3 103 61-164 189-296 (385)
20 PLN02306 hydroxypyruvate reduc 99.5 6.9E-13 1.5E-17 122.2 12.6 103 61-164 162-284 (386)
21 PLN02928 oxidoreductase family 99.5 6E-13 1.3E-17 121.1 12.0 103 61-164 156-274 (347)
22 PLN03139 formate dehydrogenase 99.5 5.6E-13 1.2E-17 122.6 11.5 103 61-164 196-303 (386)
23 PRK13243 glyoxylate reductase; 99.4 1E-12 2.2E-17 119.0 12.6 102 61-164 147-252 (333)
24 KOG0068 D-3-phosphoglycerate d 99.4 4.2E-13 9E-18 119.1 9.5 142 20-164 86-248 (406)
25 PRK11790 D-3-phosphoglycerate 99.4 1.1E-12 2.3E-17 122.0 12.1 100 60-164 147-251 (409)
26 PRK15438 erythronate-4-phospha 99.4 2.3E-12 5.1E-17 118.2 12.7 101 59-164 111-219 (378)
27 KOG0069 Glyoxylate/hydroxypyru 99.4 3.1E-12 6.8E-17 114.8 12.3 149 15-164 95-265 (336)
28 TIGR01327 PGDH D-3-phosphoglyc 99.4 4.2E-12 9E-17 121.5 13.5 153 9-164 65-241 (525)
29 PRK13581 D-3-phosphoglycerate 99.4 4.1E-12 8.9E-17 121.6 13.0 102 61-164 137-242 (526)
30 PRK15469 ghrA bifunctional gly 99.4 1.9E-12 4E-17 116.3 9.7 102 61-164 133-238 (312)
31 PRK00257 erythronate-4-phospha 99.4 6.2E-12 1.3E-16 115.6 12.9 101 59-164 111-219 (381)
32 PRK06436 glycerate dehydrogena 99.4 5.4E-12 1.2E-16 112.9 11.7 98 60-164 118-221 (303)
33 PRK12480 D-lactate dehydrogena 99.3 3.5E-11 7.6E-16 108.9 14.0 99 61-164 143-246 (330)
34 COG1064 AdhP Zn-dependent alco 99.3 1.6E-11 3.4E-16 110.7 10.4 147 43-198 147-305 (339)
35 TIGR02853 spore_dpaA dipicolin 99.3 7E-11 1.5E-15 105.0 13.2 119 45-164 132-253 (287)
36 PRK09880 L-idonate 5-dehydroge 99.3 1E-10 2.2E-15 105.7 13.5 139 50-197 158-308 (343)
37 TIGR03366 HpnZ_proposed putati 99.2 5.2E-11 1.1E-15 104.7 11.2 138 50-195 109-261 (280)
38 PRK09424 pntA NAD(P) transhydr 99.2 4.6E-11 9.9E-16 113.4 9.8 92 62-153 163-287 (509)
39 TIGR01202 bchC 2-desacetyl-2-h 99.2 8.7E-11 1.9E-15 104.8 11.0 138 49-197 133-274 (308)
40 PRK08605 D-lactate dehydrogena 99.2 2.2E-10 4.8E-15 103.8 12.9 100 61-164 143-248 (332)
41 PRK08306 dipicolinate synthase 99.2 3.6E-10 7.9E-15 100.9 12.0 100 60-160 148-250 (296)
42 PLN02178 cinnamyl-alcohol dehy 99.1 6E-10 1.3E-14 102.4 12.6 141 51-197 166-316 (375)
43 cd08237 ribitol-5-phosphate_DH 99.1 6E-10 1.3E-14 100.8 12.2 139 51-196 150-298 (341)
44 TIGR02822 adh_fam_2 zinc-bindi 99.1 6.5E-10 1.4E-14 100.1 11.8 141 50-198 154-299 (329)
45 COG1062 AdhC Zn-dependent alco 99.1 8.4E-10 1.8E-14 98.7 11.1 110 53-164 176-300 (366)
46 PLN02586 probable cinnamyl alc 99.1 1.6E-09 3.5E-14 98.8 12.2 140 51-197 172-321 (360)
47 TIGR03201 dearomat_had 6-hydro 99.1 1.6E-09 3.5E-14 98.1 11.8 139 51-197 156-315 (349)
48 cd08230 glucose_DH Glucose deh 99.0 1.5E-09 3.3E-14 98.4 11.2 130 62-197 171-318 (355)
49 PRK13403 ketol-acid reductoiso 99.0 1.6E-09 3.5E-14 97.0 10.3 93 61-153 13-108 (335)
50 cd08239 THR_DH_like L-threonin 99.0 4.2E-09 9.2E-14 94.5 12.2 140 50-197 152-305 (339)
51 PF00107 ADH_zinc_N: Zinc-bind 99.0 5.5E-10 1.2E-14 86.7 5.2 115 74-194 1-130 (130)
52 cd08281 liver_ADH_like1 Zinc-d 99.0 4.8E-09 1E-13 95.8 11.8 132 61-197 189-338 (371)
53 TIGR03451 mycoS_dep_FDH mycoth 99.0 4.3E-09 9.4E-14 95.6 11.3 132 61-197 174-324 (358)
54 PLN02740 Alcohol dehydrogenase 99.0 7.1E-09 1.5E-13 95.2 12.6 133 61-197 196-347 (381)
55 TIGR00561 pntA NAD(P) transhyd 99.0 3E-09 6.5E-14 100.9 10.3 92 62-153 162-286 (511)
56 KOG0022 Alcohol dehydrogenase, 98.9 5.6E-09 1.2E-13 92.5 10.1 100 61-161 190-306 (375)
57 PRK10309 galactitol-1-phosphat 98.9 6.8E-09 1.5E-13 93.7 11.0 140 51-197 150-311 (347)
58 TIGR02819 fdhA_non_GSH formald 98.9 1.1E-08 2.4E-13 94.7 12.0 101 50-153 174-301 (393)
59 TIGR00518 alaDH alanine dehydr 98.9 7.2E-09 1.6E-13 95.3 10.3 92 62-153 165-269 (370)
60 TIGR02818 adh_III_F_hyde S-(hy 98.9 1.4E-08 3.1E-13 92.7 12.0 101 51-153 174-289 (368)
61 PF07991 IlvN: Acetohydroxy ac 98.9 7.4E-09 1.6E-13 84.0 8.7 90 62-151 2-95 (165)
62 PLN02514 cinnamyl-alcohol dehy 98.9 2.8E-08 6E-13 90.5 12.6 140 51-197 169-318 (357)
63 cd08300 alcohol_DH_class_III c 98.8 4.1E-08 9E-13 89.5 12.4 92 61-153 184-290 (368)
64 PLN02827 Alcohol dehydrogenase 98.8 4E-08 8.7E-13 90.2 11.8 132 61-197 191-342 (378)
65 cd01075 NAD_bind_Leu_Phe_Val_D 98.8 4.9E-08 1.1E-12 82.4 10.2 85 59-144 23-109 (200)
66 KOG0023 Alcohol dehydrogenase, 98.8 2.5E-08 5.4E-13 88.6 8.4 161 43-218 162-336 (360)
67 cd08233 butanediol_DH_like (2R 98.7 1.3E-07 2.8E-12 85.4 12.6 140 50-197 161-315 (351)
68 cd08301 alcohol_DH_plants Plan 98.7 1.3E-07 2.8E-12 86.2 12.1 93 61-154 185-292 (369)
69 PF03446 NAD_binding_2: NAD bi 98.7 8E-08 1.7E-12 78.3 9.6 90 65-154 2-97 (163)
70 PRK14189 bifunctional 5,10-met 98.7 7.1E-08 1.5E-12 85.4 9.3 81 58-154 152-233 (285)
71 PRK14175 bifunctional 5,10-met 98.7 1.5E-07 3.3E-12 83.4 11.3 80 59-154 153-233 (286)
72 PLN03154 putative allyl alcoho 98.7 1.3E-07 2.9E-12 85.8 10.5 101 50-153 146-260 (348)
73 cd08285 NADP_ADH NADP(H)-depen 98.7 2.4E-07 5.2E-12 83.6 11.5 101 51-154 156-269 (351)
74 PRK14192 bifunctional 5,10-met 98.6 2.4E-07 5.3E-12 82.2 10.8 81 58-154 153-234 (283)
75 cd01080 NAD_bind_m-THF_DH_Cycl 98.6 2.1E-07 4.5E-12 76.6 9.6 78 61-154 41-119 (168)
76 PF02882 THF_DHG_CYH_C: Tetrah 98.6 3.2E-07 7E-12 74.8 9.9 80 59-154 31-111 (160)
77 PRK00045 hemA glutamyl-tRNA re 98.6 3.3E-07 7.2E-12 85.7 11.2 103 51-153 167-282 (423)
78 PRK14194 bifunctional 5,10-met 98.6 2.6E-07 5.6E-12 82.4 10.0 81 57-153 152-233 (301)
79 PF01488 Shikimate_DH: Shikima 98.6 1.8E-07 3.9E-12 74.0 8.1 93 61-153 9-111 (135)
80 cd08238 sorbose_phosphate_red 98.6 2.6E-07 5.7E-12 85.7 10.5 131 61-197 173-334 (410)
81 cd08277 liver_alcohol_DH_like 98.6 3.1E-07 6.7E-12 83.7 10.5 93 61-154 182-289 (365)
82 PRK05479 ketol-acid reductoiso 98.6 4.2E-07 9.1E-12 82.2 10.1 88 61-148 14-105 (330)
83 PRK14191 bifunctional 5,10-met 98.5 4.6E-07 1E-11 80.2 9.7 81 57-153 150-231 (285)
84 PRK14176 bifunctional 5,10-met 98.5 4.7E-07 1E-11 80.2 9.7 80 58-153 158-238 (287)
85 cd08296 CAD_like Cinnamyl alco 98.5 6.3E-07 1.4E-11 80.4 10.7 101 51-154 153-262 (333)
86 cd05212 NAD_bind_m-THF_DH_Cycl 98.5 8.8E-07 1.9E-11 70.7 10.1 81 58-154 22-103 (140)
87 TIGR01035 hemA glutamyl-tRNA r 98.5 5.4E-07 1.2E-11 84.2 10.2 93 61-153 177-279 (417)
88 COG4221 Short-chain alcohol de 98.5 1E-07 2.2E-12 82.0 4.8 138 62-215 4-153 (246)
89 PRK10792 bifunctional 5,10-met 98.5 5.5E-07 1.2E-11 79.7 9.6 80 58-153 153-233 (285)
90 cd05213 NAD_bind_Glutamyl_tRNA 98.5 9.6E-07 2.1E-11 79.3 11.2 104 51-154 163-276 (311)
91 cd01079 NAD_bind_m-THF_DH NAD 98.5 5.9E-07 1.3E-11 75.2 8.9 90 61-154 59-159 (197)
92 TIGR02825 B4_12hDH leukotriene 98.5 7E-07 1.5E-11 79.7 9.7 101 50-153 126-239 (325)
93 PF01262 AlaDh_PNT_C: Alanine 98.5 1E-06 2.2E-11 72.2 9.5 91 62-152 18-140 (168)
94 COG0604 Qor NADPH:quinone redu 98.5 2.2E-06 4.9E-11 77.5 12.6 102 50-154 130-244 (326)
95 cd01065 NAD_bind_Shikimate_DH 98.5 1.1E-06 2.5E-11 70.1 9.5 104 50-154 6-119 (155)
96 TIGR01505 tartro_sem_red 2-hyd 98.5 9E-07 2E-11 78.5 9.7 89 66-154 1-96 (291)
97 cd08242 MDR_like Medium chain 98.5 3E-06 6.6E-11 75.2 13.1 128 61-197 153-285 (319)
98 cd05283 CAD1 Cinnamyl alcohol 98.5 1.8E-06 3.8E-11 77.6 11.6 139 51-197 159-306 (337)
99 PRK14172 bifunctional 5,10-met 98.5 9.6E-07 2.1E-11 77.9 9.6 81 58-154 152-233 (278)
100 PRK14190 bifunctional 5,10-met 98.5 1E-06 2.2E-11 78.1 9.7 82 57-154 151-233 (284)
101 PRK05225 ketol-acid reductoiso 98.5 3E-07 6.5E-12 85.7 6.7 90 61-150 33-130 (487)
102 PRK14170 bifunctional 5,10-met 98.5 9.7E-07 2.1E-11 78.1 9.5 82 57-154 150-232 (284)
103 PRK14177 bifunctional 5,10-met 98.5 1.1E-06 2.3E-11 77.8 9.6 81 57-153 152-233 (284)
104 PRK14171 bifunctional 5,10-met 98.4 1.1E-06 2.4E-11 77.8 9.4 81 57-153 152-233 (288)
105 PRK14169 bifunctional 5,10-met 98.4 1.3E-06 2.8E-11 77.3 9.6 81 58-154 150-231 (282)
106 cd08265 Zn_ADH3 Alcohol dehydr 98.4 3.2E-06 7E-11 77.6 12.5 93 61-154 201-310 (384)
107 PRK14166 bifunctional 5,10-met 98.4 1.4E-06 3E-11 77.1 9.6 80 58-153 151-231 (282)
108 COG2084 MmsB 3-hydroxyisobutyr 98.4 1.5E-06 3.2E-11 77.1 9.7 89 66-154 2-98 (286)
109 PRK14183 bifunctional 5,10-met 98.4 1.4E-06 3.1E-11 76.9 9.4 82 57-154 150-232 (281)
110 PRK14173 bifunctional 5,10-met 98.4 1.5E-06 3.3E-11 77.0 9.6 82 57-154 148-230 (287)
111 PRK14179 bifunctional 5,10-met 98.4 1.5E-06 3.2E-11 77.0 9.4 82 57-154 151-233 (284)
112 PRK14188 bifunctional 5,10-met 98.4 1.5E-06 3.3E-11 77.5 9.5 80 58-154 152-233 (296)
113 PRK14187 bifunctional 5,10-met 98.4 1.6E-06 3.5E-11 77.1 9.6 81 58-154 154-235 (294)
114 cd08295 double_bond_reductase_ 98.4 1.3E-06 2.9E-11 78.5 9.3 101 50-153 139-253 (338)
115 PRK14180 bifunctional 5,10-met 98.4 1.7E-06 3.7E-11 76.5 9.6 80 58-153 152-232 (282)
116 TIGR00465 ilvC ketol-acid redu 98.4 1.8E-06 3.8E-11 77.8 9.9 91 62-153 1-95 (314)
117 cd08246 crotonyl_coA_red croto 98.4 3.3E-06 7.1E-11 77.6 11.8 130 61-197 191-359 (393)
118 PLN02516 methylenetetrahydrofo 98.4 1.8E-06 3.9E-11 76.9 9.6 82 57-154 160-242 (299)
119 cd08299 alcohol_DH_class_I_II_ 98.4 2.4E-06 5.1E-11 78.3 10.7 93 61-154 188-295 (373)
120 PRK11559 garR tartronate semia 98.4 2.5E-06 5.5E-11 75.7 10.5 90 65-154 3-99 (296)
121 PRK14182 bifunctional 5,10-met 98.4 1.9E-06 4.2E-11 76.1 9.6 82 57-154 150-232 (282)
122 PRK14186 bifunctional 5,10-met 98.4 2E-06 4.3E-11 76.6 9.6 81 58-154 152-233 (297)
123 cd08231 MDR_TM0436_like Hypoth 98.4 1.8E-06 4E-11 78.2 9.7 102 50-153 165-282 (361)
124 PLN02897 tetrahydrofolate dehy 98.4 1.9E-06 4.1E-11 77.9 9.3 81 58-154 208-289 (345)
125 PRK15461 NADH-dependent gamma- 98.4 2.9E-06 6.3E-11 75.6 10.5 90 65-154 2-98 (296)
126 cd08293 PTGR2 Prostaglandin re 98.4 3.4E-06 7.4E-11 75.7 11.0 87 64-152 155-255 (345)
127 cd05188 MDR Medium chain reduc 98.4 4.9E-06 1.1E-10 71.1 11.4 102 51-154 123-235 (271)
128 PRK14178 bifunctional 5,10-met 98.4 2.1E-06 4.7E-11 75.8 9.2 81 57-153 145-226 (279)
129 PLN02616 tetrahydrofolate dehy 98.4 2E-06 4.4E-11 78.1 9.2 81 58-154 225-306 (364)
130 PRK14181 bifunctional 5,10-met 98.4 2.5E-06 5.4E-11 75.6 9.6 82 57-154 146-232 (287)
131 PRK14193 bifunctional 5,10-met 98.4 2.5E-06 5.3E-11 75.6 9.4 81 58-154 152-235 (284)
132 COG0686 Ald Alanine dehydrogen 98.3 1.5E-06 3.3E-11 77.2 7.7 91 63-153 167-270 (371)
133 PRK14184 bifunctional 5,10-met 98.3 3.2E-06 6.9E-11 74.9 9.3 82 57-154 150-236 (286)
134 cd05284 arabinose_DH_like D-ar 98.3 8.4E-06 1.8E-10 72.9 12.3 103 51-154 155-269 (340)
135 cd08294 leukotriene_B4_DH_like 98.3 3.1E-06 6.7E-11 75.2 9.3 100 50-152 131-242 (329)
136 PRK14185 bifunctional 5,10-met 98.3 3.6E-06 7.8E-11 74.8 9.5 81 58-154 151-236 (293)
137 PRK10083 putative oxidoreducta 98.3 3.9E-06 8.5E-11 75.1 9.8 93 61-154 158-262 (339)
138 PRK14168 bifunctional 5,10-met 98.3 3.6E-06 7.9E-11 75.0 9.3 82 57-154 154-240 (297)
139 PRK14167 bifunctional 5,10-met 98.3 4E-06 8.7E-11 74.7 9.4 81 58-154 151-236 (297)
140 COG0059 IlvC Ketol-acid reduct 98.3 3E-06 6.4E-11 75.0 8.5 90 61-150 15-108 (338)
141 cd08240 6_hydroxyhexanoate_dh_ 98.3 6.7E-06 1.4E-10 74.1 11.0 140 51-197 164-317 (350)
142 cd08258 Zn_ADH4 Alcohol dehydr 98.3 1.5E-05 3.3E-10 70.8 13.1 139 50-195 152-306 (306)
143 cd05311 NAD_bind_2_malic_enz N 98.3 1.4E-05 3E-10 68.8 12.2 91 60-151 21-128 (226)
144 PRK06505 enoyl-(acyl carrier p 98.3 4.4E-06 9.6E-11 73.2 9.4 37 62-98 5-44 (271)
145 KOG1200 Mitochondrial/plastidi 98.3 1.5E-06 3.3E-11 72.6 6.0 140 62-216 12-165 (256)
146 PRK07066 3-hydroxybutyryl-CoA 98.3 5.8E-06 1.3E-10 74.7 10.2 85 65-149 8-117 (321)
147 PRK07502 cyclohexadienyl dehyd 98.3 5.1E-06 1.1E-10 74.3 9.7 91 64-154 6-103 (307)
148 KOG1205 Predicted dehydrogenas 98.3 1.1E-06 2.5E-11 77.6 5.2 137 61-212 9-160 (282)
149 cd08287 FDH_like_ADH3 formalde 98.3 8.4E-06 1.8E-10 73.1 11.0 101 51-154 158-271 (345)
150 PRK08415 enoyl-(acyl carrier p 98.3 6.3E-06 1.4E-10 72.4 9.9 36 62-97 3-41 (274)
151 PRK07417 arogenate dehydrogena 98.3 4.7E-06 1E-10 73.6 9.1 89 66-154 2-94 (279)
152 COG0190 FolD 5,10-methylene-te 98.3 4.7E-06 1E-10 73.3 8.7 81 58-154 150-231 (283)
153 cd08286 FDH_like_ADH2 formalde 98.2 9.9E-06 2.2E-10 72.7 10.8 93 61-154 164-269 (345)
154 cd08283 FDH_like_1 Glutathione 98.2 1.4E-05 3.1E-10 73.4 11.8 102 50-154 173-309 (386)
155 PRK09260 3-hydroxybutyryl-CoA 98.2 4.2E-06 9.2E-11 74.2 8.0 88 65-152 2-119 (288)
156 cd08255 2-desacetyl-2-hydroxye 98.2 8.3E-06 1.8E-10 70.8 9.7 101 51-154 87-193 (277)
157 PRK14174 bifunctional 5,10-met 98.2 8.1E-06 1.7E-10 72.8 9.6 80 58-153 153-237 (295)
158 cd05191 NAD_bind_amino_acid_DH 98.2 1.5E-05 3.2E-10 58.0 9.4 65 61-150 20-85 (86)
159 cd08260 Zn_ADH6 Alcohol dehydr 98.2 1.6E-05 3.4E-10 71.5 11.6 93 61-154 163-267 (345)
160 KOG1201 Hydroxysteroid 17-beta 98.2 1.5E-06 3.2E-11 76.9 4.7 157 61-238 35-221 (300)
161 cd08254 hydroxyacyl_CoA_DH 6-h 98.2 1.4E-05 3E-10 71.1 11.0 93 61-154 163-266 (338)
162 PRK00258 aroE shikimate 5-dehy 98.2 7.8E-06 1.7E-10 72.3 9.3 94 61-154 120-224 (278)
163 PRK12490 6-phosphogluconate de 98.2 1.1E-05 2.4E-10 72.0 10.2 88 66-154 2-97 (299)
164 PRK07340 ornithine cyclodeamin 98.2 1.4E-05 3E-10 71.7 10.8 99 62-164 123-233 (304)
165 PRK08339 short chain dehydroge 98.2 1.6E-06 3.4E-11 75.5 4.5 40 62-101 6-46 (263)
166 PLN02545 3-hydroxybutyryl-CoA 98.2 8.1E-06 1.8E-10 72.5 9.1 88 65-152 5-121 (295)
167 cd08289 MDR_yhfp_like Yhfp put 98.2 8.6E-06 1.9E-10 72.2 9.1 89 63-153 146-245 (326)
168 PRK08618 ornithine cyclodeamin 98.2 1.9E-05 4.2E-10 71.4 11.4 98 63-163 126-236 (325)
169 COG0373 HemA Glutamyl-tRNA red 98.2 6.6E-06 1.4E-10 76.3 8.2 94 61-154 175-277 (414)
170 PLN00203 glutamyl-tRNA reducta 98.2 9.8E-06 2.1E-10 77.6 9.5 93 62-154 264-372 (519)
171 PRK08862 short chain dehydroge 98.2 9.8E-06 2.1E-10 69.3 8.6 41 62-102 3-44 (227)
172 cd08284 FDH_like_2 Glutathione 98.2 1.2E-05 2.7E-10 71.9 9.7 102 50-154 156-269 (344)
173 PRK07819 3-hydroxybutyryl-CoA 98.2 1.3E-05 2.8E-10 71.3 9.6 86 65-151 6-121 (286)
174 PF02737 3HCDH_N: 3-hydroxyacy 98.2 7.5E-06 1.6E-10 67.9 7.5 94 66-164 1-124 (180)
175 cd08269 Zn_ADH9 Alcohol dehydr 98.1 5.1E-05 1.1E-09 66.6 13.2 92 61-153 127-231 (312)
176 COG0300 DltE Short-chain dehyd 98.1 7.5E-07 1.6E-11 78.2 1.4 42 62-103 4-46 (265)
177 PRK07533 enoyl-(acyl carrier p 98.1 1.4E-05 3.1E-10 69.2 9.4 38 61-98 7-47 (258)
178 cd08278 benzyl_alcohol_DH Benz 98.1 1.7E-05 3.7E-10 72.2 10.2 91 62-153 185-287 (365)
179 cd05279 Zn_ADH1 Liver alcohol 98.1 1.4E-05 3.1E-10 72.8 9.6 92 61-153 181-287 (365)
180 PRK07530 3-hydroxybutyryl-CoA 98.1 1.6E-05 3.4E-10 70.6 9.5 86 65-151 5-120 (292)
181 PRK09599 6-phosphogluconate de 98.1 2E-05 4.3E-10 70.4 10.2 88 66-154 2-97 (301)
182 cd08291 ETR_like_1 2-enoyl thi 98.1 1.9E-05 4.2E-10 70.4 9.9 89 63-153 142-244 (324)
183 cd08245 CAD Cinnamyl alcohol d 98.1 1.9E-05 4E-10 70.4 9.7 100 51-153 152-258 (330)
184 cd08262 Zn_ADH8 Alcohol dehydr 98.1 3.8E-05 8.3E-10 68.7 11.8 93 61-154 159-267 (341)
185 cd01078 NAD_bind_H4MPT_DH NADP 98.1 2.9E-05 6.3E-10 64.8 10.2 93 61-154 25-132 (194)
186 cd08298 CAD2 Cinnamyl alcohol 98.1 1.8E-05 3.9E-10 70.4 9.5 100 51-153 157-258 (329)
187 PF03807 F420_oxidored: NADP o 98.1 2E-05 4.3E-10 58.0 7.9 85 66-151 1-94 (96)
188 PRK13940 glutamyl-tRNA reducta 98.1 3.2E-05 7E-10 72.2 11.2 92 61-154 178-276 (414)
189 cd05285 sorbitol_DH Sorbitol d 98.1 2.1E-05 4.5E-10 70.7 9.7 93 61-154 160-268 (343)
190 cd08270 MDR4 Medium chain dehy 98.1 2.7E-05 5.8E-10 68.3 10.0 100 51-154 122-225 (305)
191 TIGR00692 tdh L-threonine 3-de 98.1 4E-05 8.6E-10 68.8 11.2 92 62-154 160-264 (340)
192 TIGR01470 cysG_Nterm siroheme 98.1 1.3E-05 2.9E-10 67.9 7.6 89 61-150 6-99 (205)
193 PRK06035 3-hydroxyacyl-CoA deh 98.1 2.8E-05 6.1E-10 69.0 10.1 87 65-151 4-121 (291)
194 cd05281 TDH Threonine dehydrog 98.1 3.8E-05 8.3E-10 69.0 11.1 92 62-154 162-265 (341)
195 TIGR01692 HIBADH 3-hydroxyisob 98.1 1.5E-05 3.2E-10 70.7 8.3 85 69-153 1-92 (288)
196 TIGR02371 ala_DH_arch alanine 98.1 3.5E-05 7.7E-10 69.7 10.7 98 63-163 127-237 (325)
197 PF13241 NAD_binding_7: Putati 98.1 4.8E-06 1E-10 62.8 4.2 86 61-151 4-91 (103)
198 PRK09422 ethanol-active dehydr 98.1 2.8E-05 6E-10 69.5 9.9 101 51-154 152-264 (338)
199 cd01076 NAD_bind_1_Glu_DH NAD( 98.1 2.3E-05 5E-10 67.5 9.0 94 61-158 28-141 (227)
200 PLN02702 L-idonate 5-dehydroge 98.1 2.6E-05 5.7E-10 70.8 9.9 92 61-153 179-287 (364)
201 PRK06141 ornithine cyclodeamin 98.1 4.4E-05 9.5E-10 68.8 11.0 97 63-162 124-233 (314)
202 cd08256 Zn_ADH2 Alcohol dehydr 98.0 3.9E-05 8.5E-10 69.2 10.7 93 61-154 172-277 (350)
203 TIGR01751 crot-CoA-red crotony 98.0 1.8E-05 3.8E-10 73.1 8.6 92 61-154 187-313 (398)
204 cd05280 MDR_yhdh_yhfp Yhdh and 98.0 2.7E-05 5.9E-10 68.8 9.5 90 63-154 146-246 (325)
205 PRK08268 3-hydroxy-acyl-CoA de 98.0 2.1E-05 4.5E-10 75.3 9.3 88 65-153 8-125 (507)
206 PLN02712 arogenate dehydrogena 98.0 2.6E-05 5.7E-10 76.9 10.1 93 61-154 366-463 (667)
207 cd08282 PFDH_like Pseudomonas 98.0 3.5E-05 7.6E-10 70.5 10.2 101 50-153 165-287 (375)
208 PRK14982 acyl-ACP reductase; P 98.0 3.9E-05 8.4E-10 69.8 10.2 91 61-154 152-249 (340)
209 cd08274 MDR9 Medium chain dehy 98.0 2.7E-05 5.7E-10 69.9 9.2 90 61-153 175-275 (350)
210 PRK12481 2-deoxy-D-gluconate 3 98.0 2.6E-05 5.6E-10 67.3 8.7 36 62-97 6-42 (251)
211 PRK08293 3-hydroxybutyryl-CoA 98.0 3.2E-05 7E-10 68.5 9.5 84 65-149 4-118 (287)
212 PRK06079 enoyl-(acyl carrier p 98.0 1.2E-05 2.5E-10 69.6 6.4 36 62-97 5-43 (252)
213 PLN02256 arogenate dehydrogena 98.0 4.2E-05 9E-10 68.7 10.1 90 63-154 35-130 (304)
214 PRK07370 enoyl-(acyl carrier p 98.0 2.9E-05 6.2E-10 67.4 8.7 36 62-97 4-42 (258)
215 cd08234 threonine_DH_like L-th 98.0 2.3E-05 5.1E-10 69.7 8.3 93 61-154 157-260 (334)
216 PRK15059 tartronate semialdehy 98.0 4.3E-05 9.4E-10 68.1 9.9 88 66-154 2-96 (292)
217 PRK06603 enoyl-(acyl carrier p 98.0 8.1E-06 1.8E-10 70.9 5.1 37 61-97 5-44 (260)
218 PRK06718 precorrin-2 dehydroge 98.0 2.9E-05 6.4E-10 65.6 8.3 88 61-149 7-99 (202)
219 PLN02688 pyrroline-5-carboxyla 98.0 4.3E-05 9.4E-10 66.7 9.6 84 66-150 2-94 (266)
220 cd08292 ETR_like_2 2-enoyl thi 98.0 5.2E-05 1.1E-09 67.1 10.1 91 61-153 137-240 (324)
221 PRK07063 short chain dehydroge 98.0 2.1E-05 4.6E-10 67.8 7.4 40 62-101 5-45 (260)
222 PRK05993 short chain dehydroge 98.0 3E-05 6.5E-10 67.8 8.4 40 63-102 3-43 (277)
223 PRK14618 NAD(P)H-dependent gly 98.0 5.2E-05 1.1E-09 68.4 10.1 87 65-153 5-106 (328)
224 COG3967 DltE Short-chain dehyd 98.0 5.4E-06 1.2E-10 69.9 3.4 45 62-106 3-48 (245)
225 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.0 4.2E-05 9.1E-10 73.2 9.8 88 64-152 5-122 (503)
226 PRK08507 prephenate dehydrogen 98.0 5.3E-05 1.2E-09 66.7 9.7 87 66-154 2-94 (275)
227 PRK07062 short chain dehydroge 98.0 3.7E-05 7.9E-10 66.5 8.5 42 61-102 5-47 (265)
228 PRK05872 short chain dehydroge 98.0 3.9E-05 8.3E-10 68.0 8.7 41 61-101 6-47 (296)
229 PRK05876 short chain dehydroge 98.0 2.9E-05 6.4E-10 68.1 7.9 40 62-101 4-44 (275)
230 PRK08594 enoyl-(acyl carrier p 98.0 8.9E-06 1.9E-10 70.6 4.5 36 61-96 4-42 (257)
231 cd08232 idonate-5-DH L-idonate 98.0 5.4E-05 1.2E-09 67.7 9.8 101 51-154 155-265 (339)
232 TIGR02823 oxido_YhdH putative 98.0 5.1E-05 1.1E-09 67.3 9.5 91 62-154 143-244 (323)
233 PRK12771 putative glutamate sy 98.0 1.8E-05 3.9E-10 76.6 7.0 70 62-131 135-234 (564)
234 PRK08159 enoyl-(acyl carrier p 97.9 3.4E-05 7.4E-10 67.6 8.1 37 61-97 7-46 (272)
235 TIGR02992 ectoine_eutC ectoine 97.9 8.1E-05 1.8E-09 67.4 10.8 97 63-162 128-238 (326)
236 cd08243 quinone_oxidoreductase 97.9 5.9E-05 1.3E-09 66.2 9.6 91 61-153 140-240 (320)
237 cd05288 PGDH Prostaglandin deh 97.9 5.2E-05 1.1E-09 67.3 9.2 102 50-154 133-247 (329)
238 PRK06719 precorrin-2 dehydroge 97.9 3.3E-05 7.2E-10 62.7 7.3 86 61-149 10-99 (157)
239 KOG0725 Reductases with broad 97.9 2E-05 4.4E-10 69.5 6.5 43 61-103 5-48 (270)
240 cd05282 ETR_like 2-enoyl thioe 97.9 6.5E-05 1.4E-09 66.3 9.8 92 61-154 136-240 (323)
241 cd08252 AL_MDR Arginate lyase 97.9 6E-05 1.3E-09 67.1 9.6 97 64-161 150-258 (336)
242 TIGR00872 gnd_rel 6-phosphoglu 97.9 7.3E-05 1.6E-09 66.7 9.9 88 66-154 2-96 (298)
243 PRK07531 bifunctional 3-hydrox 97.9 6E-05 1.3E-09 71.9 9.9 85 65-149 5-114 (495)
244 PRK05396 tdh L-threonine 3-deh 97.9 5.1E-05 1.1E-09 68.1 8.9 92 62-154 162-266 (341)
245 PRK07984 enoyl-(acyl carrier p 97.9 6.5E-05 1.4E-09 65.6 9.2 36 62-97 4-42 (262)
246 PRK06139 short chain dehydroge 97.9 3.7E-05 8.1E-10 69.6 7.9 40 62-101 5-45 (330)
247 PRK05867 short chain dehydroge 97.9 3E-05 6.5E-10 66.6 7.0 39 62-100 7-46 (253)
248 PLN02730 enoyl-[acyl-carrier-p 97.9 2E-05 4.3E-10 70.7 6.0 39 61-100 6-47 (303)
249 PRK06545 prephenate dehydrogen 97.9 5.7E-05 1.2E-09 69.2 9.1 89 65-154 1-98 (359)
250 PRK06407 ornithine cyclodeamin 97.9 0.00012 2.5E-09 65.7 10.9 99 63-164 116-228 (301)
251 PRK06300 enoyl-(acyl carrier p 97.9 3.2E-05 6.9E-10 69.2 7.2 36 61-96 5-43 (299)
252 PRK08589 short chain dehydroge 97.9 5.1E-05 1.1E-09 66.2 8.2 35 62-96 4-39 (272)
253 PRK06823 ornithine cyclodeamin 97.9 0.00014 3E-09 65.7 11.1 99 63-164 127-238 (315)
254 PRK03369 murD UDP-N-acetylmura 97.9 4.8E-05 1E-09 72.4 8.5 69 62-130 10-81 (488)
255 PF02423 OCD_Mu_crystall: Orni 97.9 6.8E-05 1.5E-09 67.5 9.0 97 64-163 128-239 (313)
256 PRK08265 short chain dehydroge 97.9 6.3E-05 1.4E-09 65.1 8.5 40 62-101 4-44 (261)
257 TIGR03026 NDP-sugDHase nucleot 97.9 6.5E-05 1.4E-09 70.0 9.1 88 66-153 2-122 (411)
258 TIGR01809 Shik-DH-AROM shikima 97.9 0.00012 2.7E-09 64.9 10.5 81 50-130 110-201 (282)
259 PRK12491 pyrroline-5-carboxyla 97.9 0.00013 2.8E-09 64.5 10.5 96 65-164 3-107 (272)
260 PLN02858 fructose-bisphosphate 97.9 6.5E-05 1.4E-09 79.4 9.9 92 63-154 3-101 (1378)
261 PRK06129 3-hydroxyacyl-CoA deh 97.9 3.9E-05 8.4E-10 68.7 7.2 66 65-130 3-93 (308)
262 TIGR00507 aroE shikimate 5-deh 97.9 0.0001 2.2E-09 64.9 9.7 93 62-154 115-217 (270)
263 cd08297 CAD3 Cinnamyl alcohol 97.9 8.5E-05 1.8E-09 66.5 9.4 101 51-154 155-268 (341)
264 cd08264 Zn_ADH_like2 Alcohol d 97.9 0.00012 2.6E-09 65.0 10.3 95 51-153 152-255 (325)
265 PRK08655 prephenate dehydrogen 97.9 9.7E-05 2.1E-09 69.5 9.9 87 66-153 2-94 (437)
266 PRK06398 aldose dehydrogenase; 97.9 4.1E-05 9E-10 66.3 7.0 37 62-98 4-41 (258)
267 PRK08690 enoyl-(acyl carrier p 97.8 6.4E-05 1.4E-09 65.3 8.0 36 62-97 4-42 (261)
268 PRK06130 3-hydroxybutyryl-CoA 97.8 0.00011 2.3E-09 65.7 9.7 66 65-130 5-90 (311)
269 PRK07791 short chain dehydroge 97.8 6.1E-05 1.3E-09 66.4 8.0 36 62-97 4-40 (286)
270 PLN02712 arogenate dehydrogena 97.8 8.8E-05 1.9E-09 73.2 9.7 90 64-154 52-146 (667)
271 PRK06046 alanine dehydrogenase 97.8 0.00015 3.2E-09 65.6 10.5 96 64-163 129-238 (326)
272 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.00012 2.6E-09 63.3 9.6 40 62-101 4-44 (263)
273 PRK00094 gpsA NAD(P)H-dependen 97.8 0.00012 2.5E-09 65.5 9.8 85 66-151 3-105 (325)
274 PRK12549 shikimate 5-dehydroge 97.8 7.7E-05 1.7E-09 66.3 8.5 98 61-163 124-237 (284)
275 cd05211 NAD_bind_Glu_Leu_Phe_V 97.8 0.00014 3.1E-09 62.1 9.7 91 60-153 19-128 (217)
276 PLN02780 ketoreductase/ oxidor 97.8 2.5E-05 5.3E-10 70.4 5.2 41 62-102 51-92 (320)
277 PRK07109 short chain dehydroge 97.8 6.3E-05 1.4E-09 68.0 7.9 40 62-101 6-46 (334)
278 KOG1207 Diacetyl reductase/L-x 97.8 3.1E-05 6.7E-10 63.8 5.2 42 61-102 4-46 (245)
279 cd08263 Zn_ADH10 Alcohol dehyd 97.8 9.4E-05 2E-09 67.2 9.1 91 62-153 186-289 (367)
280 PRK07825 short chain dehydroge 97.8 0.0001 2.2E-09 64.1 8.6 40 62-101 3-43 (273)
281 PRK07478 short chain dehydroge 97.8 5.8E-05 1.3E-09 64.8 7.0 40 62-101 4-44 (254)
282 cd08244 MDR_enoyl_red Possible 97.8 0.00012 2.6E-09 64.6 9.2 91 62-154 141-244 (324)
283 PLN02858 fructose-bisphosphate 97.8 0.00011 2.3E-09 77.9 10.1 92 63-154 323-421 (1378)
284 PRK07856 short chain dehydroge 97.8 7.8E-05 1.7E-09 64.0 7.7 39 61-99 3-42 (252)
285 PRK05808 3-hydroxybutyryl-CoA 97.8 0.00012 2.6E-09 64.7 9.0 83 65-149 4-116 (282)
286 PRK10754 quinone oxidoreductas 97.8 0.00011 2.5E-09 65.2 8.9 92 61-154 138-242 (327)
287 PRK06182 short chain dehydroge 97.8 0.00011 2.4E-09 63.9 8.6 39 63-101 2-41 (273)
288 PRK05854 short chain dehydroge 97.8 8.9E-05 1.9E-09 66.3 8.1 42 61-102 11-53 (313)
289 PRK06997 enoyl-(acyl carrier p 97.8 3.5E-05 7.7E-10 67.0 5.3 35 62-96 4-41 (260)
290 PRK15057 UDP-glucose 6-dehydro 97.8 0.00014 3E-09 67.4 9.5 88 66-154 2-120 (388)
291 cd05278 FDH_like Formaldehyde 97.8 0.00012 2.7E-09 65.4 9.0 93 61-154 165-270 (347)
292 PRK07890 short chain dehydroge 97.8 0.0001 2.2E-09 63.2 8.0 39 62-100 3-42 (258)
293 cd08290 ETR 2-enoyl thioester 97.8 0.00021 4.5E-09 63.9 10.3 100 51-153 135-253 (341)
294 cd08236 sugar_DH NAD(P)-depend 97.8 0.00015 3.3E-09 64.9 9.3 101 50-153 148-260 (343)
295 PTZ00354 alcohol dehydrogenase 97.8 0.00019 4.2E-09 63.5 9.8 91 61-153 138-242 (334)
296 cd08250 Mgc45594_like Mgc45594 97.8 0.00023 5E-09 63.2 10.3 100 51-153 128-239 (329)
297 PRK07831 short chain dehydroge 97.8 0.00014 3.1E-09 62.7 8.7 41 61-101 14-56 (262)
298 PRK14806 bifunctional cyclohex 97.8 0.00014 3.1E-09 72.5 9.8 89 65-154 4-100 (735)
299 PRK12747 short chain dehydroge 97.8 3E-05 6.5E-10 66.5 4.4 34 62-95 2-36 (252)
300 cd05286 QOR2 Quinone oxidoredu 97.7 0.00025 5.3E-09 61.7 10.2 92 61-154 134-238 (320)
301 COG0345 ProC Pyrroline-5-carbo 97.7 0.00029 6.4E-09 62.0 10.5 96 65-165 2-106 (266)
302 PRK11064 wecC UDP-N-acetyl-D-m 97.7 0.00018 3.9E-09 67.3 9.8 88 65-153 4-121 (415)
303 PLN02350 phosphogluconate dehy 97.7 0.00013 2.9E-09 69.5 8.9 90 65-154 7-110 (493)
304 PRK13771 putative alcohol dehy 97.7 0.00019 4.2E-09 63.9 9.5 99 51-154 152-258 (334)
305 PRK14031 glutamate dehydrogena 97.7 0.0002 4.3E-09 67.3 9.8 93 59-152 223-343 (444)
306 PRK07792 fabG 3-ketoacyl-(acyl 97.7 3.5E-05 7.5E-10 68.7 4.6 37 61-97 9-46 (306)
307 cd08261 Zn_ADH7 Alcohol dehydr 97.7 0.00018 3.9E-09 64.3 9.1 93 61-154 157-261 (337)
308 KOG1014 17 beta-hydroxysteroid 97.7 0.00015 3.1E-09 64.7 8.0 137 62-209 47-194 (312)
309 PF02254 TrkA_N: TrkA-N domain 97.7 0.00018 3.9E-09 54.6 7.7 64 67-130 1-73 (116)
310 cd08235 iditol_2_DH_like L-idi 97.7 0.00021 4.6E-09 63.9 9.3 100 51-153 155-267 (343)
311 KOG1197 Predicted quinone oxid 97.7 0.00034 7.4E-09 61.0 9.9 97 61-159 144-253 (336)
312 PRK08291 ectoine utilization p 97.7 0.00042 9E-09 62.8 11.1 98 63-163 131-242 (330)
313 cd08259 Zn_ADH5 Alcohol dehydr 97.7 0.00038 8.3E-09 61.5 10.6 100 51-154 152-259 (332)
314 KOG0409 Predicted dehydrogenas 97.7 0.00013 2.8E-09 64.8 7.3 71 63-133 34-105 (327)
315 PRK06114 short chain dehydroge 97.7 0.00012 2.5E-09 63.1 7.0 38 61-98 5-43 (254)
316 COG0287 TyrA Prephenate dehydr 97.7 0.0002 4.4E-09 63.5 8.6 90 64-154 3-101 (279)
317 PRK11880 pyrroline-5-carboxyla 97.7 0.00019 4.2E-09 62.6 8.4 66 65-130 3-73 (267)
318 PRK06940 short chain dehydroge 97.7 0.00014 3E-09 63.8 7.5 36 64-100 2-37 (275)
319 PRK07589 ornithine cyclodeamin 97.7 0.00049 1.1E-08 62.8 11.2 97 64-163 129-240 (346)
320 PRK08324 short chain dehydroge 97.7 0.00014 3E-09 72.1 8.1 42 61-102 419-461 (681)
321 cd08276 MDR7 Medium chain dehy 97.7 0.00038 8.2E-09 61.6 10.2 92 61-154 158-262 (336)
322 PRK06484 short chain dehydroge 97.7 0.00019 4.1E-09 68.3 8.7 41 62-102 267-308 (520)
323 TIGR03325 BphB_TodD cis-2,3-di 97.7 0.00025 5.3E-09 61.3 8.7 40 62-101 3-43 (262)
324 COG0569 TrkA K+ transport syst 97.7 0.00014 3E-09 62.5 7.0 67 65-131 1-78 (225)
325 PRK07814 short chain dehydroge 97.6 0.00022 4.7E-09 61.8 8.2 39 62-100 8-47 (263)
326 cd08279 Zn_ADH_class_III Class 97.6 0.00022 4.9E-09 64.7 8.6 93 61-154 180-285 (363)
327 TIGR02817 adh_fam_1 zinc-bindi 97.6 0.00023 4.9E-09 63.5 8.4 88 64-152 149-248 (336)
328 PRK13302 putative L-aspartate 97.6 0.00024 5.2E-09 62.7 8.4 89 63-152 5-99 (271)
329 PRK09310 aroDE bifunctional 3- 97.6 0.00028 6E-09 67.2 9.3 79 51-130 320-401 (477)
330 PRK06483 dihydromonapterin red 97.6 0.0003 6.5E-09 59.7 8.7 36 64-99 2-38 (236)
331 PRK06171 sorbitol-6-phosphate 97.6 0.00017 3.8E-09 62.3 7.3 39 61-99 6-45 (266)
332 PRK06124 gluconate 5-dehydroge 97.6 0.00015 3.2E-09 62.3 6.8 40 61-100 8-48 (256)
333 cd08249 enoyl_reductase_like e 97.6 0.00026 5.7E-09 63.6 8.7 91 62-154 153-257 (339)
334 PRK11199 tyrA bifunctional cho 97.6 0.00021 4.6E-09 65.9 8.2 78 63-154 97-178 (374)
335 PRK14619 NAD(P)H-dependent gly 97.6 0.00035 7.6E-09 62.6 9.2 76 63-152 3-83 (308)
336 cd05276 p53_inducible_oxidored 97.6 0.00048 1E-08 60.0 9.9 91 61-153 137-240 (323)
337 cd08248 RTN4I1 Human Reticulon 97.6 0.00027 5.9E-09 63.3 8.6 88 63-153 162-259 (350)
338 COG1712 Predicted dinucleotide 97.6 0.00019 4.2E-09 61.2 7.0 87 66-153 2-95 (255)
339 PRK05717 oxidoreductase; Valid 97.6 0.0003 6.6E-09 60.4 8.5 42 59-100 5-47 (255)
340 PRK07097 gluconate 5-dehydroge 97.6 0.00037 8E-09 60.3 9.0 41 61-101 7-48 (265)
341 COG1748 LYS9 Saccharopine dehy 97.6 0.00023 4.9E-09 65.8 7.9 87 65-153 2-101 (389)
342 PLN02477 glutamate dehydrogena 97.6 0.00025 5.4E-09 66.1 8.3 91 59-152 201-311 (410)
343 PF01210 NAD_Gly3P_dh_N: NAD-d 97.6 0.00038 8.1E-09 56.3 8.4 86 66-152 1-104 (157)
344 PRK07680 late competence prote 97.6 0.00041 8.8E-09 61.0 9.2 95 66-164 2-106 (273)
345 PRK06484 short chain dehydroge 97.6 0.00031 6.8E-09 66.8 9.1 41 62-102 3-44 (520)
346 PRK07677 short chain dehydroge 97.6 0.00023 5E-09 61.1 7.4 37 64-100 1-38 (252)
347 COG2423 Predicted ornithine cy 97.6 0.00069 1.5E-08 61.4 10.7 98 64-164 130-241 (330)
348 PRK08085 gluconate 5-dehydroge 97.6 0.00025 5.3E-09 60.9 7.5 39 62-100 7-46 (254)
349 cd08241 QOR1 Quinone oxidoredu 97.6 0.00065 1.4E-08 59.2 10.3 92 61-154 137-241 (323)
350 PRK06463 fabG 3-ketoacyl-(acyl 97.6 0.00035 7.5E-09 60.1 8.4 36 62-97 5-41 (255)
351 PRK06194 hypothetical protein; 97.6 0.0003 6.6E-09 61.4 8.1 39 62-100 4-43 (287)
352 PRK12862 malic enzyme; Reviewe 97.6 0.0006 1.3E-08 68.2 11.1 121 42-165 168-306 (763)
353 smart00829 PKS_ER Enoylreducta 97.6 0.00065 1.4E-08 58.1 10.0 92 61-154 102-208 (288)
354 PRK06172 short chain dehydroge 97.6 0.00027 5.8E-09 60.6 7.6 39 62-100 5-44 (253)
355 PRK09242 tropinone reductase; 97.6 0.00045 9.7E-09 59.4 8.9 41 61-101 6-47 (257)
356 PRK07889 enoyl-(acyl carrier p 97.6 0.00014 3.1E-09 62.9 5.9 36 62-97 5-43 (256)
357 cd08267 MDR1 Medium chain dehy 97.6 0.00068 1.5E-08 59.4 10.2 101 51-154 132-243 (319)
358 PRK06125 short chain dehydroge 97.6 0.00055 1.2E-08 59.0 9.5 40 62-101 5-45 (259)
359 PRK05562 precorrin-2 dehydroge 97.6 0.00027 5.9E-09 60.6 7.3 87 62-150 23-116 (223)
360 PRK07679 pyrroline-5-carboxyla 97.6 0.0006 1.3E-08 60.2 9.8 86 64-150 3-98 (279)
361 PF00208 ELFV_dehydrog: Glutam 97.6 0.00045 9.8E-09 60.1 8.8 92 61-153 29-148 (244)
362 PRK15182 Vi polysaccharide bio 97.6 0.00039 8.4E-09 65.3 9.0 89 64-154 6-123 (425)
363 cd05195 enoyl_red enoyl reduct 97.5 0.00093 2E-08 57.1 10.7 92 61-154 106-212 (293)
364 TIGR01289 LPOR light-dependent 97.5 0.00033 7.2E-09 62.7 8.2 39 63-101 2-42 (314)
365 PRK07523 gluconate 5-dehydroge 97.5 0.00024 5.2E-09 61.0 7.0 40 61-100 7-47 (255)
366 PF03721 UDPG_MGDP_dh_N: UDP-g 97.5 0.00026 5.6E-09 59.0 6.8 89 65-154 1-123 (185)
367 PTZ00079 NADP-specific glutama 97.5 0.00043 9.3E-09 65.1 8.9 94 59-153 232-354 (454)
368 PRK08643 acetoin reductase; Va 97.5 0.00038 8.3E-09 59.7 8.1 37 64-100 2-39 (256)
369 cd08288 MDR_yhdh Yhdh putative 97.5 0.00044 9.6E-09 61.1 8.7 89 63-153 146-244 (324)
370 PRK12548 shikimate 5-dehydroge 97.5 0.00043 9.3E-09 61.6 8.6 37 61-97 123-160 (289)
371 cd05312 NAD_bind_1_malic_enz N 97.5 0.0011 2.5E-08 58.5 11.1 107 59-165 20-156 (279)
372 PRK06841 short chain dehydroge 97.5 0.00046 1E-08 59.1 8.6 39 61-99 12-51 (255)
373 cd08266 Zn_ADH_like1 Alcohol d 97.5 0.00073 1.6E-08 59.6 10.0 92 61-154 164-268 (342)
374 PRK06476 pyrroline-5-carboxyla 97.5 0.00052 1.1E-08 59.8 8.8 94 66-164 2-103 (258)
375 PLN02253 xanthoxin dehydrogena 97.5 0.0004 8.7E-09 60.5 8.1 40 61-100 15-55 (280)
376 TIGR01832 kduD 2-deoxy-D-gluco 97.5 0.00039 8.5E-09 59.3 7.9 36 62-97 3-39 (248)
377 PRK08303 short chain dehydroge 97.5 0.00028 6E-09 63.1 7.2 36 62-97 6-42 (305)
378 PRK07232 bifunctional malic en 97.5 0.00082 1.8E-08 67.0 11.1 122 41-165 159-298 (752)
379 cd05289 MDR_like_2 alcohol deh 97.5 0.00046 1E-08 59.9 8.5 91 61-154 142-241 (309)
380 cd05313 NAD_bind_2_Glu_DH NAD( 97.5 0.00033 7.2E-09 61.2 7.4 93 59-152 33-154 (254)
381 cd08273 MDR8 Medium chain dehy 97.5 0.00077 1.7E-08 59.7 10.0 91 61-154 137-236 (331)
382 PRK12384 sorbitol-6-phosphate 97.5 0.00059 1.3E-08 58.6 8.8 37 64-100 2-39 (259)
383 PTZ00142 6-phosphogluconate de 97.5 0.0006 1.3E-08 64.8 9.5 88 65-153 2-103 (470)
384 PRK06935 2-deoxy-D-gluconate 3 97.5 0.0004 8.7E-09 59.8 7.7 36 61-96 12-48 (258)
385 PRK07576 short chain dehydroge 97.5 0.00048 1E-08 59.8 8.1 40 61-100 6-46 (264)
386 PRK05855 short chain dehydroge 97.5 0.00035 7.6E-09 66.7 7.9 41 61-101 312-353 (582)
387 PRK07067 sorbitol dehydrogenas 97.5 0.00052 1.1E-08 58.9 8.3 40 62-101 4-44 (257)
388 PRK14027 quinate/shikimate deh 97.5 0.00052 1.1E-08 61.0 8.4 68 61-128 124-203 (283)
389 PRK06128 oxidoreductase; Provi 97.5 0.00034 7.3E-09 62.0 7.2 36 62-97 53-89 (300)
390 cd08253 zeta_crystallin Zeta-c 97.5 0.00065 1.4E-08 59.3 9.0 91 61-153 142-245 (325)
391 PRK00676 hemA glutamyl-tRNA re 97.5 0.00062 1.3E-08 61.9 9.0 89 61-154 171-264 (338)
392 TIGR01318 gltD_gamma_fam gluta 97.5 0.0005 1.1E-08 65.1 8.7 69 63-131 140-238 (467)
393 PRK08277 D-mannonate oxidoredu 97.5 0.0005 1.1E-08 59.9 8.1 40 61-100 7-47 (278)
394 PRK12861 malic enzyme; Reviewe 97.5 0.00087 1.9E-08 66.8 10.6 119 41-162 163-299 (764)
395 COG0169 AroE Shikimate 5-dehyd 97.5 0.00053 1.1E-08 60.9 8.2 90 61-153 123-228 (283)
396 PRK07774 short chain dehydroge 97.5 0.00044 9.5E-09 58.9 7.5 39 62-100 4-43 (250)
397 PRK12823 benD 1,6-dihydroxycyc 97.5 0.00066 1.4E-08 58.4 8.7 37 62-98 6-43 (260)
398 PRK05693 short chain dehydroge 97.5 0.00063 1.4E-08 59.1 8.6 37 65-101 2-39 (274)
399 PRK06522 2-dehydropantoate 2-r 97.5 0.00097 2.1E-08 58.9 9.8 83 66-150 2-99 (304)
400 PRK06179 short chain dehydroge 97.5 0.00049 1.1E-08 59.6 7.8 38 63-100 3-41 (270)
401 COG2085 Predicted dinucleotide 97.5 0.00098 2.1E-08 56.5 9.2 87 65-153 2-95 (211)
402 TIGR01724 hmd_rel H2-forming N 97.5 0.00086 1.9E-08 60.4 9.4 80 75-154 31-119 (341)
403 PRK07035 short chain dehydroge 97.4 0.0005 1.1E-08 58.8 7.6 40 61-100 5-45 (252)
404 TIGR02824 quinone_pig3 putativ 97.4 0.0011 2.5E-08 57.8 9.9 92 61-154 137-241 (325)
405 PRK09414 glutamate dehydrogena 97.4 0.00081 1.8E-08 63.3 9.3 94 59-153 227-345 (445)
406 PF10727 Rossmann-like: Rossma 97.4 0.00038 8.2E-09 54.6 5.9 87 64-151 10-104 (127)
407 PRK06180 short chain dehydroge 97.4 0.00079 1.7E-08 58.8 8.5 38 63-100 3-41 (277)
408 PRK07985 oxidoreductase; Provi 97.4 0.00048 1E-08 61.0 7.2 37 61-97 46-83 (294)
409 PRK08936 glucose-1-dehydrogena 97.4 0.00015 3.3E-09 62.6 3.8 36 62-97 5-41 (261)
410 PRK08628 short chain dehydroge 97.4 0.0005 1.1E-08 59.0 7.1 40 61-100 4-44 (258)
411 PRK14106 murD UDP-N-acetylmura 97.4 0.00067 1.5E-08 63.6 8.5 68 62-129 3-78 (450)
412 cd08268 MDR2 Medium chain dehy 97.4 0.0017 3.7E-08 56.8 10.6 92 61-154 142-246 (328)
413 PRK11730 fadB multifunctional 97.4 0.00058 1.3E-08 68.1 8.4 83 65-149 314-426 (715)
414 PRK06113 7-alpha-hydroxysteroi 97.4 0.00093 2E-08 57.4 8.7 40 61-100 8-48 (255)
415 PRK06101 short chain dehydroge 97.4 0.0011 2.3E-08 56.6 9.0 37 65-101 2-39 (240)
416 PRK10637 cysG siroheme synthas 97.4 0.00053 1.1E-08 64.9 7.6 88 61-150 9-102 (457)
417 TIGR00873 gnd 6-phosphoglucona 97.4 0.00088 1.9E-08 63.6 9.1 86 67-153 2-100 (467)
418 PRK07060 short chain dehydroge 97.4 0.00089 1.9E-08 56.8 8.4 40 61-100 6-46 (245)
419 TIGR02437 FadB fatty oxidation 97.4 0.00068 1.5E-08 67.6 8.7 83 65-149 314-426 (714)
420 PRK10669 putative cation:proto 97.4 0.00043 9.3E-09 67.0 7.1 66 65-130 418-492 (558)
421 PLN02520 bifunctional 3-dehydr 97.4 0.00077 1.7E-08 64.9 8.8 93 61-153 376-477 (529)
422 COG2130 Putative NADP-dependen 97.4 0.0013 2.9E-08 58.6 9.5 104 47-153 135-251 (340)
423 TIGR02354 thiF_fam2 thiamine b 97.4 0.0016 3.5E-08 55.0 9.7 35 62-96 19-54 (200)
424 PRK13304 L-aspartate dehydroge 97.4 0.00071 1.5E-08 59.5 7.9 86 66-152 3-93 (265)
425 PRK08340 glucose-1-dehydrogena 97.4 0.0014 3E-08 56.5 9.6 36 66-101 2-38 (259)
426 PRK07024 short chain dehydroge 97.4 0.00076 1.6E-08 58.1 7.8 38 64-101 2-40 (257)
427 PRK07454 short chain dehydroge 97.4 0.00075 1.6E-08 57.3 7.7 38 63-100 5-43 (241)
428 PRK08703 short chain dehydroge 97.4 0.00047 1E-08 58.6 6.4 40 62-101 4-44 (239)
429 PRK12859 3-ketoacyl-(acyl-carr 97.4 0.00044 9.6E-09 59.7 6.3 34 62-95 4-40 (256)
430 PRK04148 hypothetical protein; 97.3 0.00084 1.8E-08 53.1 7.1 70 63-133 16-91 (134)
431 COG1648 CysG Siroheme synthase 97.3 0.00076 1.6E-08 57.4 7.3 91 61-152 9-104 (210)
432 PRK06701 short chain dehydroge 97.3 0.00091 2E-08 59.1 8.2 38 61-98 43-81 (290)
433 PRK14030 glutamate dehydrogena 97.3 0.00092 2E-08 62.8 8.5 94 59-153 223-345 (445)
434 COG0334 GdhA Glutamate dehydro 97.3 0.00093 2E-08 61.8 8.3 83 61-144 204-306 (411)
435 PRK12809 putative oxidoreducta 97.3 0.0009 1.9E-08 65.9 8.7 68 63-130 309-406 (639)
436 PRK06523 short chain dehydroge 97.3 0.00082 1.8E-08 57.8 7.5 38 61-98 6-44 (260)
437 PRK01438 murD UDP-N-acetylmura 97.3 0.00087 1.9E-08 63.5 8.2 70 61-130 13-89 (480)
438 PRK12550 shikimate 5-dehydroge 97.3 0.0012 2.6E-08 58.4 8.5 64 63-128 121-187 (272)
439 PRK12749 quinate/shikimate deh 97.3 0.0012 2.6E-08 58.8 8.6 102 51-153 112-235 (288)
440 PRK12769 putative oxidoreducta 97.3 0.00093 2E-08 65.9 8.6 68 63-130 326-423 (654)
441 PRK08818 prephenate dehydrogen 97.3 0.0014 3E-08 60.4 9.1 81 63-154 3-91 (370)
442 cd00762 NAD_bind_malic_enz NAD 97.3 0.0026 5.5E-08 55.6 10.2 107 59-165 20-157 (254)
443 TIGR02440 FadJ fatty oxidation 97.3 0.00095 2.1E-08 66.4 8.6 84 65-149 305-418 (699)
444 PRK08993 2-deoxy-D-gluconate 3 97.3 0.0011 2.4E-08 57.0 8.0 37 61-97 7-44 (253)
445 PRK12429 3-hydroxybutyrate deh 97.3 0.0015 3.3E-08 55.7 8.8 40 62-101 2-42 (258)
446 PRK03562 glutathione-regulated 97.3 0.00062 1.4E-08 66.8 7.1 68 64-131 400-476 (621)
447 PRK07326 short chain dehydroge 97.3 0.0013 2.8E-08 55.5 8.2 40 62-101 4-44 (237)
448 TIGR02441 fa_ox_alpha_mit fatt 97.3 0.00076 1.6E-08 67.5 7.7 84 65-149 336-448 (737)
449 PRK07102 short chain dehydroge 97.3 0.0003 6.4E-09 60.0 4.3 36 65-100 2-38 (243)
450 COG0281 SfcA Malic enzyme [Ene 97.3 0.0025 5.5E-08 59.0 10.4 122 41-165 173-314 (432)
451 PRK09291 short chain dehydroge 97.3 0.0015 3.2E-08 55.9 8.5 37 64-100 2-39 (257)
452 COG1250 FadB 3-hydroxyacyl-CoA 97.3 0.0011 2.5E-08 59.4 7.9 87 64-151 3-119 (307)
453 PRK02472 murD UDP-N-acetylmura 97.2 0.0012 2.6E-08 61.8 8.4 68 62-129 3-78 (447)
454 TIGR01915 npdG NADPH-dependent 97.2 0.0015 3.3E-08 55.6 8.3 86 66-151 2-101 (219)
455 PRK03659 glutathione-regulated 97.2 0.0007 1.5E-08 66.2 7.0 86 64-149 400-496 (601)
456 PRK08229 2-dehydropantoate 2-r 97.2 0.0015 3.2E-08 59.0 8.7 84 65-150 3-106 (341)
457 PRK12921 2-dehydropantoate 2-r 97.2 0.0017 3.8E-08 57.5 9.0 83 66-150 2-101 (305)
458 PRK12939 short chain dehydroge 97.2 0.0011 2.5E-08 56.2 7.5 39 62-100 5-44 (250)
459 PRK05884 short chain dehydroge 97.2 0.0017 3.8E-08 55.0 8.6 36 66-101 2-38 (223)
460 KOG1198 Zinc-binding oxidoredu 97.2 0.0033 7.1E-08 57.5 10.8 71 61-131 155-237 (347)
461 PRK08226 short chain dehydroge 97.2 0.0015 3.3E-08 56.2 8.3 37 62-98 4-41 (263)
462 PRK05599 hypothetical protein; 97.2 0.0004 8.7E-09 59.7 4.6 36 65-101 1-37 (246)
463 TIGR01546 GAPDH-II_archae glyc 97.2 0.0019 4.2E-08 58.6 9.2 83 67-149 1-106 (333)
464 cd08272 MDR6 Medium chain dehy 97.2 0.0028 6.2E-08 55.4 10.1 90 61-153 142-243 (326)
465 TIGR02356 adenyl_thiF thiazole 97.2 0.0012 2.6E-08 55.7 7.4 36 61-96 18-54 (202)
466 PRK08261 fabG 3-ketoacyl-(acyl 97.2 0.0012 2.5E-08 62.0 8.0 36 62-97 208-244 (450)
467 PRK07832 short chain dehydroge 97.2 0.00039 8.4E-09 60.5 4.5 36 65-100 1-37 (272)
468 PRK08263 short chain dehydroge 97.2 0.0017 3.7E-08 56.5 8.5 38 63-100 2-40 (275)
469 PRK06138 short chain dehydroge 97.2 0.0016 3.4E-08 55.5 8.2 39 62-100 3-42 (252)
470 PF03949 Malic_M: Malic enzyme 97.2 0.0027 5.9E-08 55.5 9.5 107 59-165 20-157 (255)
471 cd05291 HicDH_like L-2-hydroxy 97.2 0.0016 3.5E-08 58.4 8.2 88 65-152 1-118 (306)
472 PRK12938 acetyacetyl-CoA reduc 97.2 0.0013 2.8E-08 56.0 7.3 35 63-97 2-38 (246)
473 PRK12742 oxidoreductase; Provi 97.2 0.002 4.2E-08 54.5 8.3 34 62-95 4-38 (237)
474 KOG1610 Corticosteroid 11-beta 97.2 0.00034 7.3E-09 62.5 3.7 38 61-98 26-64 (322)
475 KOG4169 15-hydroxyprostaglandi 97.2 0.00047 1E-08 59.1 4.4 39 62-100 3-42 (261)
476 PRK06181 short chain dehydroge 97.2 0.0017 3.7E-08 55.9 7.9 37 64-100 1-38 (263)
477 PRK06928 pyrroline-5-carboxyla 97.2 0.004 8.7E-08 55.0 10.5 97 65-164 2-108 (277)
478 PTZ00082 L-lactate dehydrogena 97.2 0.0026 5.6E-08 57.6 9.4 68 62-129 4-84 (321)
479 PRK11154 fadJ multifunctional 97.2 0.0016 3.5E-08 64.9 8.6 83 65-149 310-423 (708)
480 PRK06199 ornithine cyclodeamin 97.2 0.0022 4.8E-08 59.3 9.0 92 64-160 155-266 (379)
481 PF00106 adh_short: short chai 97.2 0.00048 1E-08 55.0 4.0 32 65-96 1-34 (167)
482 TIGR02632 RhaD_aldol-ADH rhamn 97.2 0.0015 3.3E-08 64.7 8.3 40 61-100 411-451 (676)
483 PRK13301 putative L-aspartate 97.1 0.0019 4E-08 56.8 7.8 87 65-153 3-95 (267)
484 cd08251 polyketide_synthase po 97.1 0.0036 7.9E-08 54.2 9.6 92 61-154 118-222 (303)
485 PF00070 Pyr_redox: Pyridine n 97.1 0.0011 2.4E-08 47.2 5.3 34 66-99 1-34 (80)
486 PRK07634 pyrroline-5-carboxyla 97.1 0.0036 7.8E-08 53.8 9.4 68 63-130 3-77 (245)
487 PRK12743 oxidoreductase; Provi 97.1 0.0022 4.8E-08 55.1 8.0 33 64-96 2-35 (256)
488 PF13460 NAD_binding_10: NADH( 97.1 0.0018 3.9E-08 52.7 7.0 61 67-129 1-70 (183)
489 PRK08267 short chain dehydroge 97.1 0.0022 4.8E-08 55.1 8.0 38 65-102 2-40 (260)
490 PTZ00117 malate dehydrogenase; 97.1 0.00086 1.9E-08 60.6 5.5 89 62-151 3-122 (319)
491 PRK12557 H(2)-dependent methyl 97.1 0.0046 9.9E-08 56.5 10.1 79 75-154 31-119 (342)
492 PRK09496 trkA potassium transp 97.1 0.0017 3.6E-08 60.8 7.5 65 66-130 2-76 (453)
493 PRK00141 murD UDP-N-acetylmura 97.0 0.0024 5.2E-08 60.6 8.2 69 61-129 12-84 (473)
494 PF02558 ApbA: Ketopantoate re 97.0 0.0016 3.4E-08 51.7 5.9 82 67-150 1-100 (151)
495 COG3288 PntA NAD/NADP transhyd 97.0 0.0014 3.1E-08 58.4 6.0 93 61-153 161-283 (356)
496 PRK01710 murD UDP-N-acetylmura 97.0 0.0028 6.1E-08 59.8 8.3 68 62-129 12-87 (458)
497 PRK06198 short chain dehydroge 97.0 0.0026 5.6E-08 54.5 7.4 39 62-100 4-44 (260)
498 PRK08063 enoyl-(acyl carrier p 97.0 0.0026 5.7E-08 54.1 7.3 38 62-99 2-41 (250)
499 PRK12826 3-ketoacyl-(acyl-carr 97.0 0.0026 5.7E-08 53.9 7.3 39 62-100 4-43 (251)
500 PRK01390 murD UDP-N-acetylmura 97.0 0.0027 5.9E-08 59.8 8.0 69 62-130 7-76 (460)
No 1
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=100.00 E-value=4.1e-59 Score=411.89 Aligned_cols=240 Identities=45% Similarity=0.675 Sum_probs=228.6
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
+++.++|+.|+|+||++||++|.+.|.|.|| ||.+|++|||.|||++|.|++++|+++..++||+|+|.|||++|
T Consensus 142 l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~DgI~RaTn~liaGK~vVV~GYG~vG 221 (420)
T COG0499 142 LLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDGILRATNVLLAGKNVVVAGYGWVG 221 (420)
T ss_pred HHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHHHHHHhhhceeecCceEEEecccccc
Confidence 4577999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+++|++|+..||+|+|+|.||-++.+|..+||++.+.+++.+.+|++++|||+++++..+.|..||+++++.|+|+++.|
T Consensus 222 rG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~E 301 (420)
T COG0499 222 RGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVE 301 (420)
T ss_pred hHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEeccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||...+... .+...++++++..|.+++++ .+.+|++||+|||+++.|||+||||+|||+|+
T Consensus 302 I~~~~L~~~-~~~~~~vr~~V~ey~l~~Gk-ri~llaeGRLvNLa~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~V 379 (420)
T COG0499 302 IDVAGLEEL-AVEKREVRPQVDEYELPDGK-RIILLAEGRLVNLAAATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGV 379 (420)
T ss_pred ccHHHHHHh-hhhHhccccCceEEEcCCCC-EEEEEecceeeeeccCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCce
Confidence 999998742 23446778899999999988 69999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|+.||+||+.||.
T Consensus 380 y~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~ 414 (420)
T COG0499 380 YRLPKELDEEVARLKLEAMGIELDELTEEQAEYLG 414 (420)
T ss_pred eeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhC
Confidence 999999999999999999999984
No 2
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=4.3e-59 Score=403.96 Aligned_cols=239 Identities=57% Similarity=0.860 Sum_probs=231.0
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|+||+|||++|.+.|+|.+| ||++|..|||.|+|+++++++++|+++.++.||.++|.|||.+|
T Consensus 147 ~~~~i~GiseEttTGVH~Lykm~k~G~L~VPAiNVNDSVTKsKFDnLygcreSl~DgikraTDvM~aGKv~Vv~GYGdVG 226 (434)
T KOG1370|consen 147 MFKKIRGISEETTTGVHNLYKMSKNGKLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRATDVMIAGKVAVVCGYGDVG 226 (434)
T ss_pred HHhhhcccchhhhhhHHHHHHHHhCCceecceeeccchhhhhhccccccchhhhhhhhhhhhhheecccEEEEeccCccc
Confidence 5778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
.++|+.||.+|++|+|+++||..+.+|..+|+++++++++++.+|+++++||++.++..+.|+.||.+++|.|+|+++.|
T Consensus 227 KgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~~H~~~mk~d~IvCN~Ghfd~E 306 (434)
T KOG1370|consen 227 KGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITGEHFDQMKNDAIVCNIGHFDTE 306 (434)
T ss_pred hhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhHHHHHhCcCCcEEeccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
||..+|.. ++++...+++++++|.|++++ .|.+|++||+||++|.+|||+||||+||++|+
T Consensus 307 iDv~~L~~-~~~~~~~vk~QvD~~~~~~gr-~iIlLAeGRLvNL~CatghpSFvmS~sftnQvlAqIeLwt~p~~kY~~~ 384 (434)
T KOG1370|consen 307 IDVKWLNT-PALTWENVKPQVDRYILPNGK-HIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTAPEGKYKVG 384 (434)
T ss_pred eehhhccC-CcceeeecccccceeeccCCc-EEEEEecCceeecccccCCCceEEecchHHHHHHHHHHhcCCCCccccc
Confidence 99999987 566777888899999999988 69999999999999999999999999999999
Q ss_pred ------------HHHhcCCCCCccccCCHHHHhhc
Q 037949 220 ------------AALHLGKPGDKFRKLTPEQAACI 242 (243)
Q Consensus 220 ------------~~~~l~~~~~~~~~~~~~~~~~~ 242 (243)
|++||+|+|+|||+||++|++||
T Consensus 385 V~~LPKklDE~VA~lHL~kl~~kLTkLt~~Qa~Yl 419 (434)
T KOG1370|consen 385 VYVLPKKLDEYVASLHLGKLGAKLTKLTDKQAKYL 419 (434)
T ss_pred eEecchhhHHHHHHhhhhhhchhhhhhhHHHHHhc
Confidence 99999999999999999999998
No 3
>PLN02494 adenosylhomocysteinase
Probab=100.00 E-value=6.5e-54 Score=396.66 Aligned_cols=241 Identities=76% Similarity=1.134 Sum_probs=225.0
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.|+|| ||.+|+.|||.|||++++|++++|.++..+.|++|+|+|+|+||
T Consensus 187 ~~~~i~G~~EeTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~~d~i~r~t~i~LaGKtVvViGyG~IG 266 (477)
T PLN02494 187 MKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVG 266 (477)
T ss_pred HHHhhcCCcccccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccHHHHHHHhcCCccCCCEEEEECCCHHH
Confidence 4678999999999999999999999999999 99999999999999999999999998877899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|++++++|++|+++|+++.++..+...|+.+.+++++++.+|++++++|++++++.+.|+.||++++++|+|+++.+
T Consensus 267 r~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~e 346 (477)
T PLN02494 267 KGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNE 346 (477)
T ss_pred HHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCc
Confidence 99999999999999999999988778888898877788888899999999999999888899999999999999998888
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccC-chhhHHhhhcCCeecccCCCCCccccccchHHHHH----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQ-TRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA---------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~---------------- 219 (243)
||..+|...+++++.+++.+++.|.+++ ++ .+.+|++|++|||+|+.|||++|||+||++|+
T Consensus 347 ID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~-~i~ll~eGrlvNl~~~~GhP~evmd~sFa~Q~la~~~l~~~~~~~~~~ 425 (477)
T PLN02494 347 IDMLGLETYPGVKRITIKPQTDRWVFPDTGS-GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKKSGKYE 425 (477)
T ss_pred cCHHHHhhccccceeccCCCceEEEcCCCCC-EEEEEeCCccccccCCCCCCcceeeHHHHHHHHHHHHHHhcccccccC
Confidence 9999997632256677778899999998 88 79999999999999999999999999999999
Q ss_pred --------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 --------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 --------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|++|++||+||++||+
T Consensus 426 ~~v~~lP~~~D~~vA~~~L~~~g~~~~~lt~~Q~~yl~ 463 (477)
T PLN02494 426 KKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYIN 463 (477)
T ss_pred CCcEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcC
Confidence 999999999999999999999985
No 4
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=100.00 E-value=3.9e-52 Score=381.76 Aligned_cols=240 Identities=44% Similarity=0.644 Sum_probs=222.2
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.+.|.|+|| ||.+|+.|||.|+|+++.|+++++.++..++|++|+|+|+|+||
T Consensus 128 ~~~~~~G~~EeTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~Gk~VvViG~G~IG 207 (406)
T TIGR00936 128 LLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTVVVAGYGWCG 207 (406)
T ss_pred hhhccEEEeecchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCcCEEEEECCCHHH
Confidence 5678999999999999999999999999999 99999999999999999999999987767899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.++.+|++|+++|+++.+...+...|+.+.++++.++.+|++|+++|++++++.+.+..||+|++++|+|+++.+
T Consensus 208 ~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~e 287 (406)
T TIGR00936 208 KGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVE 287 (406)
T ss_pred HHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCce
Confidence 99999999999999999999998878888898877778888899999999999999987789999999999999999888
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+++... .....+++.+++.|.+++++ .+.+|++|+.|||+++.|||++|||+||++|+
T Consensus 288 Id~~aL~~~-~~~~~~~~~~v~~~~~~~g~-~i~ll~~GrlvNl~~~~ghp~~vmd~sfa~q~la~~~l~~~~~~~~~~v 365 (406)
T TIGR00936 288 IDVKALEEL-AVEKRNVRPQVDEYILKDGR-RIYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNHDKLEPGV 365 (406)
T ss_pred eCHHHHHHH-HhhccccccceEEEEeCCCC-EEEEEeCCceecccCCCCCcceeeCHHHHHHHHHHHHHHhcccccCCCe
Confidence 999998652 22334567788889999887 79999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||.++|+++++||+||++||+
T Consensus 366 ~~lp~~~d~~va~~~l~~~g~~~~~lt~~q~~y~~ 400 (406)
T TIGR00936 366 YRLPKELDEMVARLKLEAMGIEIDELTEEQKEYLG 400 (406)
T ss_pred EECCHHHHHHHHHHHHHHcCceeccCCHHHHHHhc
Confidence 999999999999999999999985
No 5
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=100.00 E-value=3.1e-51 Score=377.70 Aligned_cols=240 Identities=51% Similarity=0.766 Sum_probs=223.4
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.+.|| ||.+|+.|||.|+|+++.|+++++..+..+.|++|+|+|+|+||
T Consensus 145 ~~~~i~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~IG 224 (425)
T PRK05476 145 LLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGIKRATNVLIAGKVVVVAGYGDVG 224 (425)
T ss_pred hHhccEeeeecchHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhhHHHHHHhccCCCCCCEEEEECCCHHH
Confidence 5788999999999999999999999999999 99999999999999999999999886666899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|+.|+.+|++|+++|+++.+..++...|+++.+++++++++|+||+|+|++++++.+.+..||+|++++|+|+++.+
T Consensus 225 ~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 225 KGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred HHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 99999999999999999999998777777888877788888899999999999999987889999999999999999989
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+.+... .....++++++..|.+++++ .+.+|++|+.|||+++.|||.+|||+||++|+
T Consensus 305 id~~~L~~~-~~~~~~v~~~v~~y~~~~g~-~i~lLa~GrlvNl~~~~ghp~~vmd~sfa~q~l~~~~l~~~~~~~~~~v 382 (425)
T PRK05476 305 IDVAALEEL-AVKWREIKPQVDEYTLPDGK-RIILLAEGRLVNLGAATGHPSEVMDMSFANQALAQIELFTNRGKLEPGV 382 (425)
T ss_pred cChHHHhhc-CcceeecCCCceEEEeCCCC-EEEEEeCCcccccCCCCCCcceeeCHHHHHHHHHHHHHHhccCcCCCCe
Confidence 999998763 23456778889999999988 79999999999999999999999999999999
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|++|++|||+|++||+
T Consensus 383 ~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 417 (425)
T PRK05476 383 YVLPKELDEEVARLKLKALGVKLDELTEEQAEYIG 417 (425)
T ss_pred EECCHHHHHHHHHHHHHHcCCccccCCHHHHHHcC
Confidence 999999999999999999999985
No 6
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=100.00 E-value=6.7e-51 Score=377.43 Aligned_cols=241 Identities=61% Similarity=0.936 Sum_probs=222.2
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
|+++++|++|+|+||++||++|.++|.|.+| |+.+|..+|+.|+++.++++++.|..+..+.|++|+|+|+|+||
T Consensus 187 ~~~~i~G~~EeTttGv~rl~~m~~~g~L~iPV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IG 266 (476)
T PTZ00075 187 LVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVG 266 (476)
T ss_pred hhhccEeeeecchHHHHHHHHHHHCCCCCceEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHH
Confidence 5788999999999999999999999999998 99999999999999999999999988878999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+|++|+++|++|+++|+++.+...+...|+++.+++++++.+|+|+.|+|++++++.+.|+.||++++++|+|+++.+
T Consensus 267 r~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d~E 346 (476)
T PTZ00075 267 KGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFDNE 346 (476)
T ss_pred HHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCchH
Confidence 99999999999999999999988766777888877888889999999999999999998899999999999999999877
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
++.+.+.....+...++++++..|.+++++ .+.+|++|++|||+|+.|||++|||+||++|+
T Consensus 347 i~i~aL~~~~~vdv~evep~v~~~~~~~g~-~i~llaeGrlvNl~~~~GhP~~vMd~sfa~Q~la~~~l~~~~~~~~~~~ 425 (476)
T PTZ00075 347 IQVAELEAYPGIEIVEIKPQVDRYTFPDGK-GIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWENRDTGKYPN 425 (476)
T ss_pred HhHHHHHhcCCceeecccCCCCeEEeCCCC-EEEEEeCCCccccCCCCCCCeeEeeHHHHHHHHHHHHHHhccCccccCC
Confidence 888877653234556667778889999988 79999999999999999999999999999999
Q ss_pred -------------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -------------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -------------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||+++|++|++||++|++||+
T Consensus 426 ~v~~lp~~~d~~vA~~~L~~~g~~~~~lt~~q~~yl~ 462 (476)
T PTZ00075 426 GVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIG 462 (476)
T ss_pred ceEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcC
Confidence 999999999999999999999995
No 7
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=100.00 E-value=2.7e-50 Score=370.58 Aligned_cols=240 Identities=57% Similarity=0.863 Sum_probs=219.9
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
++++++|++|+|+||++||++|.++|.|+|| ||.+|+.|||.|+|+++.|+++.+.++..++|++|+|+|+|+||
T Consensus 135 ~~~~~~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~~l~GktVvViG~G~IG 214 (413)
T cd00401 135 LLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVG 214 (413)
T ss_pred hhhccEEEeecchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCCCCCCCEEEEECCCHHH
Confidence 5678999999999999999999999999999 99999999999999999999999988877899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE 156 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~ 156 (243)
+.+++.++.+|++|+++|+++.|+..|...|+++.+.++.+.++|+||+|+|++++++.+.++.|++|++++|+|+++.+
T Consensus 215 ~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~e 294 (413)
T cd00401 215 KGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVE 294 (413)
T ss_pred HHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCc
Confidence 99999999999999999999999989999999777777788899999999999999987669999999999999999878
Q ss_pred CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeecccCCCCCccccccchHHHHH-----------------
Q 037949 157 IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLGCPTGHPSFVMSCSFTNQA----------------- 219 (243)
Q Consensus 157 id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~s~~g~p~~~~~~~~~~~~----------------- 219 (243)
+|.+.+.. ++++..+.+.+...|.+++++ ++.+|++|++||+.+..|||++|||++|++|+
T Consensus 295 Id~~~L~~-~el~i~g~~~~~~~~~~~~g~-aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV 372 (413)
T cd00401 295 IDVKGLKE-NAVEVVNIKPQVDRYELPDGR-RIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGV 372 (413)
T ss_pred cCHHHHHh-hccEEEEccCCcceEEcCCcc-hhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcE
Confidence 99998876 355555555555556777656 89999999999999999999999999999888
Q ss_pred -----------HHHhcCCCCCccccCCHHHHhhcC
Q 037949 220 -----------AALHLGKPGDKFRKLTPEQAACIR 243 (243)
Q Consensus 220 -----------~~~~l~~~~~~~~~~~~~~~~~~~ 243 (243)
|++||..+|+++++||+||++||+
T Consensus 373 ~~~p~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~ 407 (413)
T cd00401 373 YFLPKKLDEEVARLHLGKLGVKLTKLTDKQAEYLG 407 (413)
T ss_pred EECCHHHHHHHHHHHHHhcCceeccCCHHHHHHhc
Confidence 999999999999999999999985
No 8
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=100.00 E-value=1.5e-33 Score=228.04 Aligned_cols=162 Identities=50% Similarity=0.746 Sum_probs=139.7
Q ss_pred hhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCc
Q 037949 42 NLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAG 121 (243)
Q Consensus 42 ~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aD 121 (243)
|.|+|++|++++++|.++..+.||+++|+|||++|+.+|+.|+++|++|+|+|+||.++.+|..+|+++.++++++..+|
T Consensus 1 N~yG~g~S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~ad 80 (162)
T PF00670_consen 1 NRYGTGQSLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDAD 80 (162)
T ss_dssp HHHHHHHHHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-S
T ss_pred CccccchhHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCC
Confidence 67999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCeeccc
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLMNLG 201 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ivNl~ 201 (243)
+++.+||++++++.+.|+.||+|+++.|+|+++.|||.+++... .+++.++++++..|.+++++ .+.+|++|++|||+
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~L~~~-~~~~~~v~~~v~~y~l~~G~-~i~lLa~GrlvNL~ 158 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVDALEAN-AVEREEVRPQVDRYTLPDGR-RIILLAEGRLVNLA 158 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHHHHTC-TSEEEEEETTEEEEEETTSE-EEEEEGGGSBHHHH
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeecccccc-CcEEEEcCCCeeEEEeCCCC-EEEEEECCCEEeec
Confidence 99999999999998999999999999999999999999999873 45778888999999999988 79999999999999
Q ss_pred CCCC
Q 037949 202 CPTG 205 (243)
Q Consensus 202 s~~g 205 (243)
|..|
T Consensus 159 ~a~g 162 (162)
T PF00670_consen 159 AATG 162 (162)
T ss_dssp HS-S
T ss_pred CcCC
Confidence 8765
No 9
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=99.69 E-value=3.2e-16 Score=129.80 Aligned_cols=127 Identities=21% Similarity=0.218 Sum_probs=94.7
Q ss_pred hhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhh
Q 037949 37 TLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDV 116 (243)
Q Consensus 37 k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~ 116 (243)
|+........+.+.|..-.......+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.........++...++++.
T Consensus 9 R~~~~~~~~~~~~~W~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~el 88 (178)
T PF02826_consen 9 RRLPEYHEAQRNGEWASRERFPGRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDEL 88 (178)
T ss_dssp TTHHHHHHHHHTTBHHHHTTTTBS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHH
T ss_pred hCHHHHHHHHHcCCCCCCcCCCccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhh
Confidence 44333333345555621122223468999999999999999999999999999999999987654345567667789999
Q ss_pred hcCCcEEEEccC----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 117 VSEAGLFVTTTE----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 117 ~~~aDvvi~a~G----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++.+|+|+.+.. +.++++.+.|+.||+|+++||+|+++ -+|.+++..
T Consensus 89 l~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~-~vde~aL~~ 139 (178)
T PF02826_consen 89 LAQADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVARGE-LVDEDALLD 139 (178)
T ss_dssp HHH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGG-GB-HHHHHH
T ss_pred cchhhhhhhhhccccccceeeeeeeeeccccceEEEeccchh-hhhhhHHHH
Confidence 999999998753 46889999999999999999999996 488888865
No 10
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=99.69 E-value=7.8e-18 Score=145.59 Aligned_cols=40 Identities=43% Similarity=0.610 Sum_probs=33.4
Q ss_pred cccceeeeeecchhCHHHHHHHHHcCCCCCc-----hhHHhhHHH
Q 037949 2 MKEMLVSVSEETTMGVKRLYQMQANGTLLFS-----EETTTLLFD 41 (243)
Q Consensus 2 ~~~~~~g~~E~T~tG~~~~~~~~~~~~l~~p-----~s~~k~~~~ 41 (243)
++++++|+.|+|+||++||++|.+.|.|.|| |+.+|++||
T Consensus 143 l~~~i~G~sEETTTGv~rL~am~~~g~L~~PviavNDa~tK~~FD 187 (268)
T PF05221_consen 143 LLSGIIGGSEETTTGVHRLRAMEKEGKLKFPVIAVNDAVTKHLFD 187 (268)
T ss_dssp HHHT-SEEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHHTTH
T ss_pred hhhheEEecccccccchhhhhhhhhcccCCCeeEecchhhHhhcC
Confidence 5788999999999999999999999999999 999999998
No 11
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.69 E-value=2.3e-16 Score=139.30 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=116.7
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC-------HHh---hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT-------RED---VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~-------~~~---~~- 117 (243)
.|||.+++. ...|.+|+|+|+||||+.+..+++++|| +|+++|.++.|++.|++.|++++. +++ .+
T Consensus 158 ~~HAcr~~~--vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~ 235 (354)
T KOG0024|consen 158 GVHACRRAG--VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE 235 (354)
T ss_pred hhhhhhhcC--cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence 579998875 5789999999999999999999999999 899999999999999999987432 121 11
Q ss_pred -----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh
Q 037949 118 -----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL 192 (243)
Q Consensus 118 -----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll 192 (243)
...|+.|+|+|....++. ++..++.+|.++.+|.+...++++.+... .+|+.+++ +.+|...++..+|+++
T Consensus 236 ~~~g~~~~d~~~dCsG~~~~~~a-ai~a~r~gGt~vlvg~g~~~~~fpi~~v~--~kE~~~~g-~fry~~~~y~~ai~li 311 (354)
T KOG0024|consen 236 KALGKKQPDVTFDCSGAEVTIRA-AIKATRSGGTVVLVGMGAEEIQFPIIDVA--LKEVDLRG-SFRYCNGDYPTAIELV 311 (354)
T ss_pred hhccccCCCeEEEccCchHHHHH-HHHHhccCCEEEEeccCCCccccChhhhh--hheeeeee-eeeeccccHHHHHHHH
Confidence 249999999999888874 78999999999999998766666555431 35666654 6677765655599999
Q ss_pred hcCCeeccc
Q 037949 193 AERLLMNLG 201 (243)
Q Consensus 193 ~~G~ivNl~ 201 (243)
++|+| |+.
T Consensus 312 ~sGki-~~k 319 (354)
T KOG0024|consen 312 SSGKI-DVK 319 (354)
T ss_pred HcCCc-Cch
Confidence 99998 766
No 12
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=99.59 E-value=1.2e-14 Score=130.88 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=108.1
Q ss_pred hCHHHHHHHHHcCC--CCCc----hhHHhhHHHhhh-----------ccccchhhhhh---hhccccccCcEEEEEcCCh
Q 037949 15 MGVKRLYQMQANGT--LLFS----EETTTLLFDNLY-----------GFRHSLPDGLM---RATDITIAGKIAVDCGHGD 74 (243)
Q Consensus 15 tG~~~~~~~~~~~~--l~~p----~s~~k~~~~~~~-----------~~~~~~~~av~---~~~~~~l~g~~vlViG~G~ 74 (243)
....+++.+.++|+ .++| +++..+.+.-.+ .++++-|.... ...+..+.||+++|+|.|.
T Consensus 77 ~D~vDl~aa~~~gI~Vtnvp~~~t~sVAe~~~aLiLa~~R~~~~~~~~~r~g~w~~~~~~~~~~~~~l~gktvGIiG~Gr 156 (324)
T COG1052 77 YDNVDLEAAKERGITVTNVPGYSTEAVAEHAVALILALARRIHEGDRRVREGNWSLSGGPDPLLGFDLRGKTLGIIGLGR 156 (324)
T ss_pred cCcccHHHHHHCCcEEEeCCCCCchHHHHHHHHHHHHHhhchHHHHHHHhcCcccccCCcccccccCCCCCEEEEECCCH
Confidence 45667899999988 4566 444333332222 23333232210 0112357899999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHHHHccCCCCeEEEEe
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~~l~~l~~g~~vvnv 150 (243)
||+.+|++++++|++|+.+|+++. .......++...++++.++.+|+++.+++ +.++|+.+.|+.||+++++||+
T Consensus 157 IG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNt 235 (324)
T COG1052 157 IGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNT 235 (324)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEEC
Confidence 999999999999999999999886 22333445666669999999999987643 4678999999999999999999
Q ss_pred cCCCCCCChhHHHH
Q 037949 151 GHFDNEIDMLDLEA 164 (243)
Q Consensus 151 g~~~~~id~~~l~~ 164 (243)
||++. +|.+++..
T Consensus 236 aRG~~-VDe~ALi~ 248 (324)
T COG1052 236 ARGGL-VDEQALID 248 (324)
T ss_pred CCccc-cCHHHHHH
Confidence 99974 88888865
No 13
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=99.58 E-value=8.8e-15 Score=131.81 Aligned_cols=116 Identities=26% Similarity=0.286 Sum_probs=90.9
Q ss_pred cccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-cccCHHhhhcCCcEEE
Q 037949 46 FRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVLTREDVVSEAGLFV 124 (243)
Q Consensus 46 ~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~~~~~~~~~aDvvi 124 (243)
.+++.|.. ....+..+.|||++|+|+|.||+.+|++++++|++|+++|+...+. .+...+. ...++++.+..+|+++
T Consensus 125 ~~~g~W~~-~~~~g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~-~~~~~~~~~~~~Ld~lL~~sDiv~ 202 (324)
T COG0111 125 QRRGEWDR-KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE-RAGVDGVVGVDSLDELLAEADILT 202 (324)
T ss_pred HHcCCccc-cccccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh-hhccccceecccHHHHHhhCCEEE
Confidence 34555554 1122336789999999999999999999999999999999843332 2333343 3566899999999999
Q ss_pred EccC----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 125 TTTE----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 125 ~a~G----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++. +.++++.+.|..||+|+++||++|+.. +|.++|..
T Consensus 203 lh~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~v-Vde~aL~~ 245 (324)
T COG0111 203 LHLPLTPETRGLINAEELAKMKPGAILINAARGGV-VDEDALLA 245 (324)
T ss_pred EcCCCCcchhcccCHHHHhhCCCCeEEEECCCcce-ecHHHHHH
Confidence 8753 578899999999999999999999974 88888865
No 14
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=99.55 E-value=6.4e-14 Score=126.35 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=85.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++++|+|+|.||+.+|++++ ++|++|+++|+..... .....+....++++.++.+|+|+.+.. +.++++.
T Consensus 142 ~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~ 220 (323)
T PRK15409 142 DVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGA 220 (323)
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCH
Confidence 589999999999999999999998 9999999998764321 223345555688999999999988753 5678999
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+++++||+||++. +|.++|..
T Consensus 221 ~~l~~mk~ga~lIN~aRG~v-Vde~AL~~ 248 (323)
T PRK15409 221 EQFAKMKSSAIFINAGRGPV-VDENALIA 248 (323)
T ss_pred HHHhcCCCCeEEEECCCccc-cCHHHHHH
Confidence 99999999999999999974 88888865
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.55 E-value=5.4e-14 Score=128.09 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=98.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCccc-CH-H--------hhh--cCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIPVL-TR-E--------DVV--SEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~~~-~~-~--------~~~--~~aDvvi~a~ 127 (243)
..+.+|+|+|+||||+.+++.++.+|+ +|+++|+++.|++.|++ .|.+++ +. + +.. .++|++|+|+
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~ 246 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAV 246 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECC
Confidence 455599999999999999999999998 78889999999999988 566532 22 1 111 2599999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCCC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDNE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
|++.+++ +.++.++++|.++.+|.+..+ ++...+.. +++++......+...++.++++++++|++
T Consensus 247 G~~~~~~-~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~----kel~l~gs~~~~~~~~~~~~~~ll~~g~i 314 (350)
T COG1063 247 GSPPALD-QALEALRPGGTVVVVGVYGGEDIPLPAGLVVS----KELTLRGSLRPSGREDFERALDLLASGKI 314 (350)
T ss_pred CCHHHHH-HHHHHhcCCCEEEEEeccCCccCccCHHHHHh----cccEEEeccCCCCcccHHHHHHHHHcCCC
Confidence 9988886 589999999999999998533 44545544 44556543222333344448999999998
No 16
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=99.54 E-value=8.5e-14 Score=124.95 Aligned_cols=99 Identities=22% Similarity=0.295 Sum_probs=84.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.||+++|+|+|.||+.+|++++++|++|+++|+.... ...++...+++++++.+|+|+.++. +.++++.+
T Consensus 142 ~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~----~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~ 217 (311)
T PRK08410 142 EIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN----KNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYK 217 (311)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc----cccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHH
Confidence 589999999999999999999999999999999886432 1234555678999999999988753 56889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+++++||+||++. +|.++|..
T Consensus 218 ~~~~Mk~~a~lIN~aRG~v-VDe~AL~~ 244 (311)
T PRK08410 218 ELKLLKDGAILINVGRGGI-VNEKDLAK 244 (311)
T ss_pred HHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 89888865
No 17
>PRK06487 glycerate dehydrogenase; Provisional
Probab=99.50 E-value=2.3e-13 Score=122.52 Aligned_cols=97 Identities=21% Similarity=0.247 Sum_probs=82.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.||+++|+|+|.||+.+|++++++|++|+++|+.... ...+..++++.++.+|+|+.+.. +.++++.+
T Consensus 145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~------~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~ 218 (317)
T PRK06487 145 ELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRP------ARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGAR 218 (317)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCc------ccccccCHHHHHHhCCEEEECCCCChHHhcCcCHH
Confidence 589999999999999999999999999999999875321 12234578899999999998753 57889999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||++. +|.++|..
T Consensus 219 ~~~~mk~ga~lIN~aRG~v-Vde~AL~~ 245 (317)
T PRK06487 219 ELALMKPGALLINTARGGL-VDEQALAD 245 (317)
T ss_pred HHhcCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
No 18
>PRK06932 glycerate dehydrogenase; Provisional
Probab=99.48 E-value=6.2e-13 Score=119.55 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=82.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++|+|+|+|.||+.+|++++++|++|+++|+.+... . .....++++++..+|+|+.+.. +.++++.+
T Consensus 144 ~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~---~--~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~ 218 (314)
T PRK06932 144 DVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV---C--REGYTPFEEVLKQADIVTLHCPLTETTQNLINAE 218 (314)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc---c--ccccCCHHHHHHhCCEEEEcCCCChHHhcccCHH
Confidence 5789999999999999999999999999999998654211 1 1123578899999999998753 56789999
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||+.. +|.++|..
T Consensus 219 ~l~~mk~ga~lIN~aRG~~-Vde~AL~~ 245 (314)
T PRK06932 219 TLALMKPTAFLINTGRGPL-VDEQALLD 245 (314)
T ss_pred HHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
No 19
>PRK07574 formate dehydrogenase; Provisional
Probab=99.46 E-value=5.8e-13 Score=122.53 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=85.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|++|+++|++|+++|+++.........|+. ..+++++++.+|+|+.+.. +.++++.
T Consensus 189 ~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~ 268 (385)
T PRK07574 189 DLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLFDA 268 (385)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHhCH
Confidence 5899999999999999999999999999999999876433233344554 3578899999999998864 4577998
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|..||+|+++||+||+. -+|.++|..
T Consensus 269 ~~l~~mk~ga~lIN~aRG~-iVDe~AL~~ 296 (385)
T PRK07574 269 DVLSRMKRGSYLVNTARGK-IVDRDAVVR 296 (385)
T ss_pred HHHhcCCCCcEEEECCCCc-hhhHHHHHH
Confidence 8999999999999999997 478888765
No 20
>PLN02306 hydroxypyruvate reductase
Probab=99.46 E-value=6.9e-13 Score=122.17 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=82.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHH--hhcC------------Cc-ccCHHhhhcCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQA--LTEG------------IP-VLTREDVVSEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a--~~~G------------~~-~~~~~~~~~~aDvvi 124 (243)
.+.|++|+|+|+|.||+.+|++++ ++|++|+++|+.+...... ...| .. ..+++++++.+|+|+
T Consensus 162 ~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~ 241 (386)
T PLN02306 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS 241 (386)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence 589999999999999999999985 9999999999875421111 1111 11 236888899999998
Q ss_pred Ecc----CChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 125 TTT----ENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 125 ~a~----G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++ .+.++++.+.|+.||+|+++||+||++. +|.++|..
T Consensus 242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l-VDe~AL~~ 284 (386)
T PLN02306 242 LHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV-IDEVALVE 284 (386)
T ss_pred EeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc-cCHHHHHH
Confidence 864 3567899999999999999999999974 78888865
No 21
>PLN02928 oxidoreductase family protein
Probab=99.46 E-value=6e-13 Score=121.15 Aligned_cols=103 Identities=22% Similarity=0.247 Sum_probs=83.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH------------hhcCCcccCHHhhhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA------------LTEGIPVLTREDVVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a------------~~~G~~~~~~~~~~~~aDvvi~a~G 128 (243)
.+.|++++|+|+|.||+.+|+.|+++|++|+++|++..+.... ...+....++++++..+|+|+.++.
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5789999999999999999999999999999999874321111 0011234567888999999998853
Q ss_pred ----ChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 129 ----NADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 129 ----~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++++.+.|+.||+|+++||+||++ -+|.++|..
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaRG~-lVde~AL~~ 274 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIARGG-LLDYDAVLA 274 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCCcc-ccCHHHHHH
Confidence 56789999999999999999999997 488888865
No 22
>PLN03139 formate dehydrogenase; Provisional
Probab=99.45 E-value=5.6e-13 Score=122.59 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=86.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccC----ChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTE----NADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G----~~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.........|+.. .++++++..+|+|+.++. +.++++.
T Consensus 196 ~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~ 275 (386)
T PLN03139 196 DLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNK 275 (386)
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhCH
Confidence 58999999999999999999999999999999998754333333456543 478899999999998864 4677998
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.|+.||+|+++||+|++. -+|.+++..
T Consensus 276 ~~l~~mk~ga~lIN~aRG~-iVDe~AL~~ 303 (386)
T PLN03139 276 ERIAKMKKGVLIVNNARGA-IMDTQAVAD 303 (386)
T ss_pred HHHhhCCCCeEEEECCCCc-hhhHHHHHH
Confidence 8999999999999999997 478888865
No 23
>PRK13243 glyoxylate reductase; Reviewed
Probab=99.44 E-value=1e-12 Score=119.04 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=86.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|+.++++|++|+++|+++... .....|+...++++.++.+|+|+.|+. +.++++.+
T Consensus 147 ~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~ 225 (333)
T PRK13243 147 DVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEE 225 (333)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHH
Confidence 5799999999999999999999999999999999876543 333445555678888999999998864 35788888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|++++|+|++. .+|.+++..
T Consensus 226 ~~~~mk~ga~lIN~aRg~-~vd~~aL~~ 252 (333)
T PRK13243 226 RLKLMKPTAILVNTARGK-VVDTKALVK 252 (333)
T ss_pred HHhcCCCCeEEEECcCch-hcCHHHHHH
Confidence 999999999999999997 478888865
No 24
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=99.44 E-value=4.2e-13 Score=119.12 Aligned_cols=142 Identities=16% Similarity=0.170 Sum_probs=108.9
Q ss_pred HHHHHHcCC--CCCc---------------hhHHhhHHHhhhccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHH
Q 037949 20 LYQMQANGT--LLFS---------------EETTTLLFDNLYGFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAA 82 (243)
Q Consensus 20 ~~~~~~~~~--l~~p---------------~s~~k~~~~~~~~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~ 82 (243)
+++..++|. .+.| -|+.|+..+.....+++-|.-.... +..+.|||+.|+|+|.||..+|.+
T Consensus 86 L~AAte~gi~Vvn~P~~Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~-G~el~GKTLgvlG~GrIGseVA~r 164 (406)
T KOG0068|consen 86 LKAATENGILVVNTPTANSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYL-GWELRGKTLGVLGLGRIGSEVAVR 164 (406)
T ss_pred hhhHHhCCeEEEeCCCCChHHHHHHHHHHHHHHhhhcchhheeeecCceeeccee-eeEEeccEEEEeecccchHHHHHH
Confidence 677777777 4456 2333333333444555556543322 346899999999999999999999
Q ss_pred HHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc----CChhcccHHHHccCCCCeEEEEecCCCCCCC
Q 037949 83 LKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT----ENADIIMVRHMKQMKNAAIVCNIGHFDNEID 158 (243)
Q Consensus 83 l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~----G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id 158 (243)
++.+|++|+.+|+-... .++...|++.+++++++..||++..++ .+.++++.+.|..||+|.++||++|++. +|
T Consensus 165 ~k~~gm~vI~~dpi~~~-~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVriIN~aRGGv-VD 242 (406)
T KOG0068|consen 165 AKAMGMHVIGYDPITPM-ALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVRIINVARGGV-VD 242 (406)
T ss_pred HHhcCceEEeecCCCch-HHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcEEEEecCCce-ec
Confidence 99999999999875443 356677889999999999999997764 3567899999999999999999999974 88
Q ss_pred hhHHHH
Q 037949 159 MLDLEA 164 (243)
Q Consensus 159 ~~~l~~ 164 (243)
.+++..
T Consensus 243 e~ALv~ 248 (406)
T KOG0068|consen 243 EPALVR 248 (406)
T ss_pred hHHHHH
Confidence 888865
No 25
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=99.43 E-value=1.1e-12 Score=121.98 Aligned_cols=100 Identities=19% Similarity=0.233 Sum_probs=83.1
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
..+.||+++|+|+|.||+.+|+.++++|++|+++|+.+... ..++. +.++++.++.+|+|+.+.. +.++++
T Consensus 147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~~~~----~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~ 222 (409)
T PRK11790 147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIEDKLP----LGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIG 222 (409)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCcccc----cCCceecCCHHHHHhhCCEEEEcCCCChHHhhccC
Confidence 35899999999999999999999999999999999764321 12233 3478999999999988754 567899
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.|+.||+|++++|+||+.. +|.++|..
T Consensus 223 ~~~l~~mk~ga~lIN~aRG~~-vde~aL~~ 251 (409)
T PRK11790 223 AEELALMKPGAILINASRGTV-VDIDALAD 251 (409)
T ss_pred HHHHhcCCCCeEEEECCCCcc-cCHHHHHH
Confidence 999999999999999999974 78888755
No 26
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=99.41 E-value=2.3e-12 Score=118.17 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=82.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Ch
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NA 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~ 130 (243)
+..+.|++|+|+|+|.||+.+|++|+++|++|+++|+... . ........++++.++.+|+|+.++. +.
T Consensus 111 g~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~~~--~--~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~ 186 (378)
T PRK15438 111 GFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRA--D--RGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTL 186 (378)
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCccc--c--cccccccCCHHHHHhhCCEEEEeCCCCCCcccccc
Confidence 3468999999999999999999999999999999986322 1 1112234578899999999987753 56
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++++.+.|+.||+|+++||+||++. +|.++|..
T Consensus 187 ~li~~~~l~~mk~gailIN~aRG~v-VDe~AL~~ 219 (378)
T PRK15438 187 HLADEKLIRSLKPGAILINACRGAV-VDNTALLT 219 (378)
T ss_pred cccCHHHHhcCCCCcEEEECCCchh-cCHHHHHH
Confidence 7899999999999999999999974 89888865
No 27
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=99.40 E-value=3.1e-12 Score=114.82 Aligned_cols=149 Identities=16% Similarity=0.152 Sum_probs=107.9
Q ss_pred hCHHHHHHHHHcCC--CCCc----hhHHhhHH-------Hhhhc----cccchh-hhhhhhccccccCcEEEEEcCChHH
Q 037949 15 MGVKRLYQMQANGT--LLFS----EETTTLLF-------DNLYG----FRHSLP-DGLMRATDITIAGKIAVDCGHGDVG 76 (243)
Q Consensus 15 tG~~~~~~~~~~~~--l~~p----~s~~k~~~-------~~~~~----~~~~~~-~av~~~~~~~l~g~~vlViG~G~IG 76 (243)
....+++++.++|+ -++| ++...... .+..+ ...+-| .......+..+.||+|+|+|+|.||
T Consensus 95 ~D~vDl~a~~krgI~V~nvp~~~~~~vAd~~~~lil~~~R~~~~g~~~~~~g~w~~~~~~~~g~~~~gK~vgilG~G~IG 174 (336)
T KOG0069|consen 95 YDHVDLEAARKRGIRVANVPDVLTDDVADLAVSLLLALLRRFSEGNEMVRNGGWGWAGGWPLGYDLEGKTVGILGLGRIG 174 (336)
T ss_pred cchhhHHHHHhcCceEeccCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhcCCccccCCccccccccCCEEEEecCcHHH
Confidence 56788999999988 5567 33222221 11111 112223 1111111235789999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEcc-C---ChhcccHHHHccCCCCeEEEEecC
Q 037949 77 RGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTT-E---NADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 77 ~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~-G---~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
..+|++|++||+.+..+.+.+.+.+.+...+.+..+.++.+..+|+++.|. . +.++++.+.|..||+++++||+++
T Consensus 175 ~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liNk~~~~~mk~g~vlVN~aR 254 (336)
T KOG0069|consen 175 KAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLINKKFIEKMKDGAVLVNTAR 254 (336)
T ss_pred HHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhhHHHHHhcCCCeEEEeccc
Confidence 999999999997788888877776666666666778889999999998764 3 457899999999999999999999
Q ss_pred CCCCCChhHHHH
Q 037949 153 FDNEIDMLDLEA 164 (243)
Q Consensus 153 ~~~~id~~~l~~ 164 (243)
++. +|.+++..
T Consensus 255 G~i-ide~~l~e 265 (336)
T KOG0069|consen 255 GAI-IDEEALVE 265 (336)
T ss_pred ccc-ccHHHHHH
Confidence 974 77777754
No 28
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=99.39 E-value=4.2e-12 Score=121.50 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=107.0
Q ss_pred eeecchhCHHH--HHHHHHcCC--CCCc----hhHHhhHHH-----------hhhccccchhhhhhhhccccccCcEEEE
Q 037949 9 VSEETTMGVKR--LYQMQANGT--LLFS----EETTTLLFD-----------NLYGFRHSLPDGLMRATDITIAGKIAVD 69 (243)
Q Consensus 9 ~~E~T~tG~~~--~~~~~~~~~--l~~p----~s~~k~~~~-----------~~~~~~~~~~~av~~~~~~~l~g~~vlV 69 (243)
++=.+.+|+.. ++.+.++|. .+.| .++..+.+. .....+++-|..-. ..+..+.||+++|
T Consensus 65 ~I~~~~~G~d~id~~~~~~~gI~V~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~g~~l~gktvgI 143 (525)
T TIGR01327 65 VIGRAGVGVDNIDIEAATARGILVVNAPTGNTISAAEHALAMLLAAARNIPQADASLKEGEWDRKA-FMGTELYGKTLGV 143 (525)
T ss_pred EEEECCcccchhcHHHHHHCCCEEEeCCCcChHHHHHHHHHHHHHHhcCHHHHHHHHHcCCccccc-cCccccCCCEEEE
Confidence 34455566654 677888887 4556 333222222 11122333343210 0123589999999
Q ss_pred EcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcCCcEEEEccC----ChhcccHHHHccCCCC
Q 037949 70 CGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSEAGLFVTTTE----NADIIMVRHMKQMKNA 144 (243)
Q Consensus 70 iG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~aDvvi~a~G----~~~~i~~~~l~~l~~g 144 (243)
+|+|.||+.+|++++++|++|+++|+.... ..+...|+... ++++.++.+|+|+.|.. +.++++.+.|+.||++
T Consensus 144 iG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~g 222 (525)
T TIGR01327 144 IGLGRIGSIVAKRAKAFGMKVLAYDPYISP-ERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLIGAEELAKMKKG 222 (525)
T ss_pred ECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCcCHHHHhcCCCC
Confidence 999999999999999999999999985332 23445566543 68889999999998864 4678988899999999
Q ss_pred eEEEEecCCCCCCChhHHHH
Q 037949 145 AIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 145 ~~vvnvg~~~~~id~~~l~~ 164 (243)
++++|+|+++. +|.++|..
T Consensus 223 a~lIN~aRG~~-vde~aL~~ 241 (525)
T TIGR01327 223 VIIVNCARGGI-IDEAALYE 241 (525)
T ss_pred eEEEEcCCCce-eCHHHHHH
Confidence 99999999973 78877754
No 29
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=99.38 E-value=4.1e-12 Score=121.58 Aligned_cols=102 Identities=21% Similarity=0.263 Sum_probs=86.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++++|+|+|.||+.+|++++++|++|+++|+...+ ..+...|+...++++.++.+|+|+.|+. +.++++.+
T Consensus 137 ~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~~~ 215 (526)
T PRK13581 137 ELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIGAE 215 (526)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcCHH
Confidence 578999999999999999999999999999999986432 2344567665588899999999998864 45789888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||++++++|+|+++ -+|.+++..
T Consensus 216 ~l~~mk~ga~lIN~aRG~-~vde~aL~~ 242 (526)
T PRK13581 216 ELAKMKPGVRIINCARGG-IIDEAALAE 242 (526)
T ss_pred HHhcCCCCeEEEECCCCc-eeCHHHHHH
Confidence 999999999999999997 378887754
No 30
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=99.38 E-value=1.9e-12 Score=116.34 Aligned_cols=102 Identities=15% Similarity=0.032 Sum_probs=81.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC----ChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE----NADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G----~~~~i~~~ 136 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...... -....+++++++++|+|+.+.. +.++++.+
T Consensus 133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~-~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~~ 211 (312)
T PRK15469 133 HREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQS-FAGREELSAFLSQTRVLINLLPNTPETVGIINQQ 211 (312)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCcee-ecccccHHHHHhcCCEEEECCCCCHHHHHHhHHH
Confidence 578999999999999999999999999999999986643210000 0112357888999999998864 45678888
Q ss_pred HHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.|+.||+|+++||+||++. +|.++|..
T Consensus 212 ~l~~mk~ga~lIN~aRG~v-Vde~aL~~ 238 (312)
T PRK15469 212 LLEQLPDGAYLLNLARGVH-VVEDDLLA 238 (312)
T ss_pred HHhcCCCCcEEEECCCccc-cCHHHHHH
Confidence 9999999999999999974 88888865
No 31
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=99.37 E-value=6.2e-12 Score=115.61 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=83.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccC--------Ch
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTE--------NA 130 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G--------~~ 130 (243)
+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+..... ..+....++++.++++|+|+.++. +.
T Consensus 111 g~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~~~~----~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~ 186 (381)
T PRK00257 111 GVDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPRQEA----EGDGDFVSLERILEECDVISLHTPLTKEGEHPTR 186 (381)
T ss_pred CCCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCccccc----ccCccccCHHHHHhhCCEEEEeCcCCCCcccccc
Confidence 346899999999999999999999999999999998743311 122345678888899999988753 45
Q ss_pred hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
++++.+.|+.||+|+++||+|+++. +|.++|..
T Consensus 187 ~li~~~~l~~mk~gailIN~aRG~v-Vde~AL~~ 219 (381)
T PRK00257 187 HLLDEAFLASLRPGAWLINASRGAV-VDNQALRE 219 (381)
T ss_pred ccCCHHHHhcCCCCeEEEECCCCcc-cCHHHHHH
Confidence 7899999999999999999999974 88888865
No 32
>PRK06436 glycerate dehydrogenase; Provisional
Probab=99.37 E-value=5.4e-12 Score=112.86 Aligned_cols=98 Identities=18% Similarity=0.294 Sum_probs=82.4
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc--ccCHHhhhcCCcEEEEccC----Chhcc
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP--VLTREDVVSEAGLFVTTTE----NADII 133 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~--~~~~~~~~~~aDvvi~a~G----~~~~i 133 (243)
..+.|++++|+|+|.||+.+|+.++++|++|+++|++... .+.. ..++++.++.+|+|+.+.. +.+++
T Consensus 118 ~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li 191 (303)
T PRK06436 118 KLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGMI 191 (303)
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcCc
Confidence 3689999999999999999999999999999999987432 2322 3468888899999998864 46778
Q ss_pred cHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 134 MVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.+.|+.||+|+++||+|+++ .+|.+++..
T Consensus 192 ~~~~l~~mk~ga~lIN~sRG~-~vd~~aL~~ 221 (303)
T PRK06436 192 NSKMLSLFRKGLAIINVARAD-VVDKNDMLN 221 (303)
T ss_pred CHHHHhcCCCCeEEEECCCcc-ccCHHHHHH
Confidence 888999999999999999997 478888865
No 33
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=99.32 E-value=3.5e-11 Score=108.91 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=82.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCC----hhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTEN----ADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~----~~~i~~ 135 (243)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++...... .. ..+++++++.+|+|+.|... .+.++.
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~ 218 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF----LTYKDSVKEAIKDADIISLHVPANKESYHLFDK 218 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh----hhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhH
Confidence 5799999999999999999999999999999999987543211 12 23678888999999988653 366888
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.++.|++|+++||+|++. .+|.+++..
T Consensus 219 ~~l~~mk~gavlIN~aRG~-~vd~~aL~~ 246 (330)
T PRK12480 219 AMFDHVKKGAILVNAARGA-VINTPDLIA 246 (330)
T ss_pred HHHhcCCCCcEEEEcCCcc-ccCHHHHHH
Confidence 8899999999999999997 488888865
No 34
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.29 E-value=1.6e-11 Score=110.65 Aligned_cols=147 Identities=18% Similarity=0.124 Sum_probs=108.4
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH--H---h
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR--E---D 115 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~--~---~ 115 (243)
++.|+.. .+++++++. ..+|++|+|+|+|+.|...++.++++|++|+++|+++.+++.|+++|++ +++. . +
T Consensus 147 pllCaGiT~y~alk~~~--~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~ 224 (339)
T COG1064 147 PLLCAGITTYRALKKAN--VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALE 224 (339)
T ss_pred hhhcCeeeEeeehhhcC--CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhH
Confidence 4445543 467887753 4689999999999999999999999999999999999999999999986 3321 1 1
Q ss_pred hh-cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CC---CChhHHHHhhcCeEEEeecCeeeeEccCchhhHH
Q 037949 116 VV-SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NE---IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGII 190 (243)
Q Consensus 116 ~~-~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~---id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ 190 (243)
.+ +.+|+++++++ +..++ ..++.++++|+++.+|..+ .+ ++...+.. +++.+.+ +......+.+++++
T Consensus 225 ~~~~~~d~ii~tv~-~~~~~-~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~----~~~~i~G-S~~g~~~d~~e~l~ 297 (339)
T COG1064 225 AVKEIADAIIDTVG-PATLE-PSLKALRRGGTLVLVGLPGGGPIPLLPAFLLIL----KEISIVG-SLVGTRADLEEALD 297 (339)
T ss_pred HhHhhCcEEEECCC-hhhHH-HHHHHHhcCCEEEEECCCCCcccCCCCHHHhhh----cCeEEEE-EecCCHHHHHHHHH
Confidence 22 23999999999 88887 4899999999999999884 22 33443433 3455543 22233444344788
Q ss_pred hhhcCCee
Q 037949 191 ILAERLLM 198 (243)
Q Consensus 191 ll~~G~iv 198 (243)
+.++|.|.
T Consensus 298 f~~~g~Ik 305 (339)
T COG1064 298 FAAEGKIK 305 (339)
T ss_pred HHHhCCce
Confidence 88999884
No 35
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.27 E-value=7e-11 Score=105.00 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=90.1
Q ss_pred ccccchhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCc
Q 037949 45 GFRHSLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAG 121 (243)
Q Consensus 45 ~~~~~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aD 121 (243)
.+.++.+....+..+..+.|++++|+|+|.||+.+|+.|+.+|++|+++++++.+...+...|+...+ +.+.+.++|
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aD 211 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEID 211 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCC
Confidence 34444343222223446889999999999999999999999999999999998876666666665333 456678999
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+|+.|++.. +++.+.++.|+++++++|++..+...|+.....
T Consensus 212 iVint~P~~-ii~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak~ 253 (287)
T TIGR02853 212 IVINTIPAL-VLTADVLSKLPKHAVIIDLASKPGGTDFEYAKK 253 (287)
T ss_pred EEEECCChH-HhCHHHHhcCCCCeEEEEeCcCCCCCCHHHHHH
Confidence 999997543 566778999999999999999876677754433
No 36
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.25 E-value=1e-10 Score=105.70 Aligned_cols=139 Identities=17% Similarity=0.208 Sum_probs=100.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh---cC
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV---SE 119 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~---~~ 119 (243)
.++++.+.. ..+|++|+|+|+|++|+.+++.++.+|+ +|+++|.++.+++.+.+.|++ +++ ..+.. .+
T Consensus 158 a~~al~~~~--~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~ 235 (343)
T PRK09880 158 AIHAAHQAG--DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGY 235 (343)
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCC
Confidence 367776543 3479999999999999999999999999 689999999999888888975 333 22222 13
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|++++|+|.+..+. ..++.++++|+++.+|... .+++...+.. +++.+.. +..+ ..+..++++++++|++
T Consensus 236 ~D~vid~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~g-~~~~-~~~~~~~~~l~~~g~i 308 (343)
T PRK09880 236 FDVSFEVSGHPSSIN-TCLEVTRAKGVMVQVGMGGAPPEFPMMTLIV----KEISLKG-SFRF-TEEFNTAVSWLANGVI 308 (343)
T ss_pred CCEEEECCCCHHHHH-HHHHHhhcCCEEEEEccCCCCCccCHHHHHh----CCcEEEE-Eeec-cccHHHHHHHHHcCCC
Confidence 899999999877665 5799999999999999754 3455544433 2333432 2112 1234447899999986
No 37
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.25 E-value=5.2e-11 Score=104.70 Aligned_cols=138 Identities=16% Similarity=0.158 Sum_probs=99.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH---Hhhh------c
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR---EDVV------S 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~---~~~~------~ 118 (243)
.++++.+.. ..+|++|+|+|+|+||+.+++.++.+|++ |+++|.++.|+..+.+.|++ +++. .+.+ .
T Consensus 109 a~~al~~~~--~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~ 186 (280)
T TIGR03366 109 VMAALEAAG--DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGR 186 (280)
T ss_pred HHHHHHhcc--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCC
Confidence 355665443 24899999999999999999999999996 88899999998888888875 3332 1111 2
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
++|++++|+|.+..++ ..++.++++|+++.+|... .+++...+.. +++.+.. +..+...+..++++++++
T Consensus 187 g~d~vid~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~l~~ 260 (280)
T TIGR03366 187 GVDVALEFSGATAAVR-ACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR----RWLTIRG-VHNYEPRHLDQAVRFLAA 260 (280)
T ss_pred CCCEEEECCCChHHHH-HHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh----CCcEEEe-cCCCCHHHHHHHHHHHHh
Confidence 6899999999888776 4799999999999999642 2456655544 3344433 222222333448899987
Q ss_pred C
Q 037949 195 R 195 (243)
Q Consensus 195 G 195 (243)
+
T Consensus 261 ~ 261 (280)
T TIGR03366 261 N 261 (280)
T ss_pred h
Confidence 5
No 38
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.22 E-value=4.6e-11 Score=113.38 Aligned_cols=92 Identities=20% Similarity=0.227 Sum_probs=77.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCH---------------Hh---------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTR---------------ED--------- 115 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~---------------~~--------- 115 (243)
.++++|+|+|+|+||+.+++.++.+|++|+++|+++.|++++...|++. ++. ++
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999888762 211 01
Q ss_pred --hhcCCcEEEEccCCh-----hcccHHHHccCCCCeEEEEecCC
Q 037949 116 --VVSEAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 116 --~~~~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++++|++|+|+|.+ .++.+++++.||+|++++.+|..
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 124799999999864 35556799999999999999974
No 39
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.22 E-value=8.7e-11 Score=104.80 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=95.2
Q ss_pred chhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcccCHHh-hhcCCcEEEEc
Q 037949 49 SLPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPVLTRED-VVSEAGLFVTT 126 (243)
Q Consensus 49 ~~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~~~~~~-~~~~aDvvi~a 126 (243)
..|+++.+. ..+|++++|+|+|+||+.+++.++.+|++ |+++|.++.|+..+... .+++..+ .-.++|++|+|
T Consensus 133 ~a~~~~~~~---~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~--~~i~~~~~~~~g~Dvvid~ 207 (308)
T TIGR01202 133 TARHAVAGA---EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY--EVLDPEKDPRRDYRAIYDA 207 (308)
T ss_pred HHHHHHHhc---ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc--cccChhhccCCCCCEEEEC
Confidence 346777553 23689999999999999999999999996 66678888887655443 2333322 22468999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+|.+..++ ..++.++++|+++.+|.... +++...+.. +++++.. +..+...+++++++++++|++
T Consensus 208 ~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~i~~-~~~~~~~~~~~~~~l~~~g~i 274 (308)
T TIGR01202 208 SGDPSLID-TLVRRLAKGGEIVLAGFYTEPVNFDFVPAFM----KEARLRI-AAEWQPGDLHAVRELIESGAL 274 (308)
T ss_pred CCCHHHHH-HHHHhhhcCcEEEEEeecCCCcccccchhhh----cceEEEE-ecccchhHHHHHHHHHHcCCC
Confidence 99987775 57999999999999997642 344333332 3333432 212222334448899999987
No 40
>PRK08605 D-lactate dehydrogenase; Validated
Probab=99.20 E-value=2.2e-10 Score=103.77 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=80.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHH-HhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccC----Chhccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAAL-KAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTE----NADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l-~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G----~~~~i~ 134 (243)
.+.|++|+|+|+|.||+.+|+.+ +++|++|+++|+++.... ..++. +.+++++++++|+|+.|+. +..+++
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~---~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 143 SIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA---ATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhH---HhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 57899999999999999999999 789999999998765421 12233 2368888999999998864 345677
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+.++.|+++++++|++++. .+|.+++..
T Consensus 220 ~~~l~~mk~gailIN~sRG~-~vd~~aL~~ 248 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGS-LVDTKALLD 248 (332)
T ss_pred HHHHhcCCCCcEEEECCCCc-ccCHHHHHH
Confidence 77799999999999999986 478877755
No 41
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.16 E-value=3.6e-10 Score=100.85 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=82.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCcEEEEccCChhcccHH
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
..+.|++|+|+|+|.+|+.++..|+.+|++|+++|+++.+...+...|++... +.+.+.++|+||+|++. .+++.+
T Consensus 148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~-~~i~~~ 226 (296)
T PRK08306 148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPA-LVLTKE 226 (296)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCCh-hhhhHH
Confidence 35689999999999999999999999999999999998877777777876443 45667899999999764 456677
Q ss_pred HHccCCCCeEEEEecCCCCCCChh
Q 037949 137 HMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
.++.|++++++++++..+...|+.
T Consensus 227 ~l~~~~~g~vIIDla~~pggtd~~ 250 (296)
T PRK08306 227 VLSKMPPEALIIDLASKPGGTDFE 250 (296)
T ss_pred HHHcCCCCcEEEEEccCCCCcCee
Confidence 899999999999999875445543
No 42
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.13 E-value=6e-10 Score=102.36 Aligned_cols=141 Identities=14% Similarity=0.089 Sum_probs=96.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~-~~~~------~~~~~~aDv 122 (243)
|+++.+......+|++|+|.|+|+||+.+++.++.+|++|++++.++.+ .+.+...|++ +++. .+...++|+
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~ 245 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 245 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcE
Confidence 4555433211247999999999999999999999999999998877554 4555667875 3321 112246899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++|+|.+..++ ..++.++++|+++.+|... .+++...+.. ++..+.. +..+...+..+++.++++|++
T Consensus 246 vid~~G~~~~~~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~l~~~g~i 316 (375)
T PLN02178 246 IIDTVSAEHALL-PLFSLLKVSGKLVALGLPEKPLDLPIFPLVL----GRKMVGG-SQIGGMKETQEMLEFCAKHKI 316 (375)
T ss_pred EEECCCcHHHHH-HHHHhhcCCCEEEEEccCCCCCccCHHHHHh----CCeEEEE-eCccCHHHHHHHHHHHHhCCC
Confidence 999999887665 4789999999999999754 2355554433 3344432 211222333448899999987
No 43
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.13 E-value=6e-10 Score=100.75 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=93.1
Q ss_pred hhhhhhhc-cccccCcEEEEEcCChHHHHHHHHHHh-CC-CEEEEEeCCchhHHHHhhcCCcccCHHhhh--cCCcEEEE
Q 037949 51 PDGLMRAT-DITIAGKIAVDCGHGDVGRGCAAALKA-VG-ARVMGTEIDLICALQALTEGIPVLTREDVV--SEAGLFVT 125 (243)
Q Consensus 51 ~~av~~~~-~~~l~g~~vlViG~G~IG~~~A~~l~~-~G-a~V~v~d~~~~r~~~a~~~G~~~~~~~~~~--~~aDvvi~ 125 (243)
++++.+.. ....+|++|+|+|+|+||+.+++.++. .| ++|+++|+++.|++.+...+.... .++.. .++|++++
T Consensus 150 ~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~-~~~~~~~~g~d~viD 228 (341)
T cd08237 150 VHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL-IDDIPEDLAVDHAFE 228 (341)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee-hhhhhhccCCcEEEE
Confidence 46664321 113579999999999999999999885 65 589999999998877766554321 11211 25899999
Q ss_pred ccC---ChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCC
Q 037949 126 TTE---NADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERL 196 (243)
Q Consensus 126 a~G---~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ 196 (243)
|+| ++..++ +.++.++++|+++.+|.... +++...+.. +++.+.. +..+...+..++++++++|.
T Consensus 229 ~~G~~~~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----k~~~i~g-~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 229 CVGGRGSQSAIN-QIIDYIRPQGTIGLMGVSEYPVPINTRMVLE----KGLTLVG-SSRSTREDFERAVELLSRNP 298 (341)
T ss_pred CCCCCccHHHHH-HHHHhCcCCcEEEEEeecCCCcccCHHHHhh----CceEEEE-ecccCHHHHHHHHHHHHhCC
Confidence 999 455675 57999999999999997542 345444433 3344433 21222233344789999883
No 44
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.12 E-value=6.5e-10 Score=100.11 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=100.0
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHh-hhcCCcEEEEcc
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRED-VVSEAGLFVTTT 127 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~-~~~~aDvvi~a~ 127 (243)
.|+++.+. . ..+|++|+|.|+|++|+.+++.++.+|++|++++.++.+++.+++.|++ +++..+ .-...|++++++
T Consensus 154 a~~~~~~~-~-~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~ 231 (329)
T TIGR02822 154 GYRALLRA-S-LPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFA 231 (329)
T ss_pred HHHHHHhc-C-CCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECC
Confidence 36666543 2 4579999999999999999999999999999999999999889999986 343222 123579999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC-C--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCee
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF-D--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLLM 198 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~-~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~iv 198 (243)
+....+. ..++.++++|+++.+|.. . ..++...+.. ++..+.. +..+...+..++++++++|++-
T Consensus 232 ~~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~l~~~g~i~ 299 (329)
T TIGR02822 232 PAGGLVP-PALEALDRGGVLAVAGIHLTDTPPLNYQRHLF----YERQIRS-VTSNTRADAREFLELAAQHGVR 299 (329)
T ss_pred CcHHHHH-HHHHhhCCCcEEEEEeccCccCCCCCHHHHhh----CCcEEEE-eecCCHHHHHHHHHHHHhCCCe
Confidence 8877775 579999999999999974 2 2355444333 2233432 1111222333367889999873
No 45
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.09 E-value=8.4e-10 Score=98.69 Aligned_cols=110 Identities=17% Similarity=0.245 Sum_probs=88.9
Q ss_pred hhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCHHh----------hhc-C
Q 037949 53 GLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTRED----------VVS-E 119 (243)
Q Consensus 53 av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~~~----------~~~-~ 119 (243)
++.++.. ..+|++|+|+|.|.||+++.+.++..|| +|+.+|+++.+++.|++.|+. +++..+ ... +
T Consensus 176 av~nta~-v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG 254 (366)
T COG1062 176 AVVNTAK-VEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGG 254 (366)
T ss_pred Hhhhccc-CCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCC
Confidence 3444333 4689999999999999999999999999 899999999999999999984 444321 223 8
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHH
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEA 164 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~ 164 (243)
+|.+|+|+|+.+.+. ++++..+++|.++.+|..+ .+++++....
T Consensus 255 ~d~~~e~~G~~~~~~-~al~~~~~~G~~v~iGv~~~~~~i~~~~~~l 300 (366)
T COG1062 255 ADYAFECVGNVEVMR-QALEATHRGGTSVIIGVAGAGQEISTRPFQL 300 (366)
T ss_pred CCEEEEccCCHHHHH-HHHHHHhcCCeEEEEecCCCCceeecChHHe
Confidence 999999999999886 5799999999999999875 4566555443
No 46
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.06 E-value=1.6e-09 Score=98.78 Aligned_cols=140 Identities=15% Similarity=0.073 Sum_probs=94.3
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHH-HHhhcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICAL-QALTEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~-~a~~~G~~-~~~~------~~~~~~aDv 122 (243)
|+++.+... ..+|++|+|.|+|+||+.+++.++.+|++|++++.++.+.. .+...|++ +++. .+...++|+
T Consensus 172 ~~al~~~~~-~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~ 250 (360)
T PLN02586 172 YSPMKYYGM-TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDY 250 (360)
T ss_pred HHHHHHhcc-cCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCE
Confidence 455543321 34799999999999999999999999999988887766543 34467874 3321 112236899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++++|....++ +.++.++++|+++.+|... .+++...+.. ++..+.. +..+...+..++++++++|++
T Consensus 251 vid~~g~~~~~~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~li~~g~i 321 (360)
T PLN02586 251 IIDTVSAVHALG-PLLGLLKVNGKLITLGLPEKPLELPIFPLVL----GRKLVGG-SDIGGIKETQEMLDFCAKHNI 321 (360)
T ss_pred EEECCCCHHHHH-HHHHHhcCCcEEEEeCCCCCCCccCHHHHHh----CCeEEEE-cCcCCHHHHHHHHHHHHhCCC
Confidence 999999877675 4799999999999999753 3455544433 2233322 111122233448899999987
No 47
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.06 E-value=1.6e-09 Score=98.09 Aligned_cols=139 Identities=14% Similarity=0.091 Sum_probs=96.1
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-----Hh---hh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR-----ED---VV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~---~~---- 117 (243)
++++.+. . ..+|++|+|.|+|+||+.+++.++.+|++|++++.++.++..+...|++ +++. ++ .+
T Consensus 156 ~~a~~~~-~-~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAVQA-G-LKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 4455432 2 3579999999999999999999999999999999999998888888874 2221 11 11
Q ss_pred --cCCc----EEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 118 --SEAG----LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 118 --~~aD----vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
.+.| ++++|+|+...++ ..++.++++|+++.+|.... .++...+.. ++..+.. ...+...++++++
T Consensus 234 ~~~g~d~~~d~v~d~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~~~g-~~~~~~~~~~~~~ 307 (349)
T TIGR03201 234 KARGLRSTGWKIFECSGSKPGQE-SALSLLSHGGTLVVVGYTMAKTEYRLSNLMA----FHARALG-NWGCPPDRYPAAL 307 (349)
T ss_pred ccCCCCCCcCEEEECCCChHHHH-HHHHHHhcCCeEEEECcCCCCcccCHHHHhh----cccEEEE-EecCCHHHHHHHH
Confidence 1344 8999999987765 47899999999999997642 344443333 1122322 1111222344478
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 308 ~~i~~g~i 315 (349)
T TIGR03201 308 DLVLDGKI 315 (349)
T ss_pred HHHHcCCC
Confidence 99999986
No 48
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.05 E-value=1.5e-09 Score=98.36 Aligned_cols=130 Identities=16% Similarity=0.087 Sum_probs=91.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC---CchhHHHHhhcCCcccCH-----Hh--hhcCCcEEEEccCChh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI---DLICALQALTEGIPVLTR-----ED--VVSEAGLFVTTTENAD 131 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~---~~~r~~~a~~~G~~~~~~-----~~--~~~~aDvvi~a~G~~~ 131 (243)
.+|++|+|+|+|+||+.+++.++..|++|+++++ ++.+++.+.+.|++.++. .+ ...++|++|+|+|.+.
T Consensus 171 ~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 250 (355)
T cd08230 171 WNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPP 250 (355)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHH
Confidence 4799999999999999999999999999999987 677877788888764321 11 1236899999999877
Q ss_pred cccHHHHccCCCCeEEEEecCCCC--CCChh------HHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDN--EIDML------DLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~--~id~~------~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
.++ +.++.++++|+++.+|.... .++.+ .+.. +++.+.... .....+..+++.++.++++
T Consensus 251 ~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~----k~~~i~g~~-~~~~~~~~~~~~~l~~~~~ 318 (355)
T cd08230 251 LAF-EALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVL----GNKALVGSV-NANKRHFEQAVEDLAQWKY 318 (355)
T ss_pred HHH-HHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhh----cCcEEEEec-CCchhhHHHHHHHHHhccc
Confidence 665 57999999999999997542 22222 2222 333443321 1222344447888888763
No 49
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=99.03 E-value=1.6e-09 Score=97.05 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=76.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~~ 137 (243)
.++||+|+|||+|.||+.+|+.|+.+|++|+++++.......+...|+.+.+++++++.+|+|+.+... .++++.+.
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~ei 92 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEV 92 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHHH
Confidence 478999999999999999999999999999999765444445666788777899999999999988653 45676678
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
++.|++|++++...-+
T Consensus 93 l~~MK~GaiL~f~hgf 108 (335)
T PRK13403 93 EENLREGQMLLFSHGF 108 (335)
T ss_pred HhcCCCCCEEEECCCc
Confidence 9999999988875433
No 50
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.01 E-value=4.2e-09 Score=94.52 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=96.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----H---hhh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----E---DVV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~---~~~-- 117 (243)
.|+++.+.. ..+|++|+|+|+|+||+.+++.++.+|++ |++++.++.+...+...|++ +++. + +..
T Consensus 152 a~~~l~~~~--~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 229 (339)
T cd08239 152 AYHALRRVG--VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSG 229 (339)
T ss_pred HHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCC
Confidence 456665442 35799999999999999999999999998 99999999988888778874 3221 1 112
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC-CCCChh-HHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD-NEIDML-DLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAER 195 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~-~~id~~-~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G 195 (243)
.++|++++|+|....+. ..++.++++|+++.+|... ..++.. .+.. ++..+.. ...+...+..+++.++.+|
T Consensus 230 ~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~~~~g 303 (339)
T cd08239 230 AGADVAIECSGNTAARR-LALEAVRPWGRLVLVGEGGELTIEVSNDLIR----KQRTLIG-SWYFSVPDMEECAEFLARH 303 (339)
T ss_pred CCCCEEEECCCCHHHHH-HHHHHhhcCCEEEEEcCCCCcccCcHHHHHh----CCCEEEE-EecCCHHHHHHHHHHHHcC
Confidence 26899999999887664 4789999999999998754 223322 2222 2233322 1112222344478899998
Q ss_pred Ce
Q 037949 196 LL 197 (243)
Q Consensus 196 ~i 197 (243)
.+
T Consensus 304 ~i 305 (339)
T cd08239 304 KL 305 (339)
T ss_pred CC
Confidence 76
No 51
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=98.99 E-value=5.5e-10 Score=86.69 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hhc--CCcEEEEccCChhcccHHHHccC
Q 037949 74 DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VVS--EAGLFVTTTENADIIMVRHMKQM 141 (243)
Q Consensus 74 ~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~~--~aDvvi~a~G~~~~i~~~~l~~l 141 (243)
+||+.+++.++..|++|+++|.++.+++.+++.|++ +++ +.+ ... ++|++|+|+|+...++ ..++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~-~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQ-EAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHH-HHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHH-HHHHHh
Confidence 699999999999999999999999999889999975 222 222 222 5999999999988886 589999
Q ss_pred CCCeEEEEecCCC-CC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 142 KNAAIVCNIGHFD-NE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 142 ~~g~~vvnvg~~~-~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
+++|+++.+|... .. ++...+.. +++.+.+ +..+...++++++++|++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMF----KEITIRG-SWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHH----TTEEEEE-ESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHh----CCcEEEE-EccCCHHHHHHHHHHhcC
Confidence 9999999999885 33 44444444 3344543 222233344447777754
No 52
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=98.98 E-value=4.8e-09 Score=95.81 Aligned_cols=132 Identities=16% Similarity=0.121 Sum_probs=93.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~-----~~aDvvi~a~G 128 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++. .+.+ .++|++++|+|
T Consensus 189 i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 189 VRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 3579999999999999999999999999 699999999998888888875 3321 1111 25899999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC--C--CCChhHHHHhhcCeEEEeecCeee--eEccCchhhHHhhhcCCe
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD--N--EIDMLDLEAYRGIKRITIKPQTDP--WVFPQTRRGIIILAERLL 197 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~--~--~id~~~l~~~~~~~~~~i~~~~~~--~~~~~~~~ai~ll~~G~i 197 (243)
....+. ..++.++++|+++.+|... . .++...+.. +++.+...... +...+..++++++++|++
T Consensus 269 ~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i 338 (371)
T cd08281 269 SVPALE-TAYEITRRGGTTVTAGLPDPEARLSVPALSLVA----EERTLKGSYMGSCVPRRDIPRYLALYLSGRL 338 (371)
T ss_pred ChHHHH-HHHHHHhcCCEEEEEccCCCCceeeecHHHHhh----cCCEEEEEecCCCChHHHHHHHHHHHHcCCC
Confidence 877775 4789999999999999753 1 234333333 22333321111 111223337789999987
No 53
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=98.98 E-value=4.3e-09 Score=95.58 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=92.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----ED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|+++|.++.++..+...|++ +++. .+ .. .++|++++|+
T Consensus 174 ~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 174 VKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3579999999999999999999999999 599999999998888888874 3321 11 11 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCC--CCChh--HHHHhhcCeEEEeecCeee--eEccCchhhHHhhhcCCe
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDML--DLEAYRGIKRITIKPQTDP--WVFPQTRRGIIILAERLL 197 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~--~l~~~~~~~~~~i~~~~~~--~~~~~~~~ai~ll~~G~i 197 (243)
|++..++ ..+..++++|+++.+|.... .++.+ .+.. ++..+...... +...+..++++++++|++
T Consensus 254 g~~~~~~-~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l 324 (358)
T TIGR03451 254 GRPETYK-QAFYARDLAGTVVLVGVPTPDMTLELPLLDVFG----RGGALKSSWYGDCLPERDFPMLVDLYLQGRL 324 (358)
T ss_pred CCHHHHH-HHHHHhccCCEEEEECCCCCCceeeccHHHHhh----cCCEEEEeecCCCCcHHHHHHHHHHHHcCCC
Confidence 9877775 47899999999999997632 23333 2322 22333321110 111223336788999976
No 54
>PLN02740 Alcohol dehydrogenase-like
Probab=98.97 E-value=7.1e-09 Score=95.16 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=92.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-------HHhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-------REDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-------~~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++ ..+.+ .++|+++++
T Consensus 196 ~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~ 275 (381)
T PLN02740 196 VQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFEC 275 (381)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 4689999999999999999999999999 699999999999888888874 332 11211 159999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCCC--CCChhHHHHhhcCeEEEeecCee-eeE-ccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTD-PWV-FPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~-~~~-~~~~~~ai~ll~~G~i 197 (243)
+|.+..+. +.+..++++ |+++.+|.... .+++.....+ ++.++..... .+. ..+..++++++.+|++
T Consensus 276 ~G~~~~~~-~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i 347 (381)
T PLN02740 276 AGNVEVLR-EAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF---DGRSITGSVFGDFKGKSQLPNLAKQCMQGVV 347 (381)
T ss_pred CCChHHHH-HHHHhhhcCCCEEEEEccCCCCceecccHHHHh---cCCeEEEEecCCCCcHHHHHHHHHHHHcCCC
Confidence 99887776 578888886 99999997642 2343333221 2233322111 111 1123336788888976
No 55
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.97 E-value=3e-09 Score=100.94 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=76.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C--------------------------H
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T--------------------------R 113 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~--------------------------~ 113 (243)
.++.+|+|+|+|++|+..++.++.+|++|+++|.++.+++.+...|++.+ + .
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888887776531 1 1
Q ss_pred HhhhcCCcEEEEcc---CC--hhcccHHHHccCCCCeEEEEecCC
Q 037949 114 EDVVSEAGLFVTTT---EN--ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 114 ~~~~~~aDvvi~a~---G~--~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+..+++|++|+|+ |. |.+++.++++.||+|+++++++..
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 12346899999998 54 446888899999999999998764
No 56
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.94 E-value=5.6e-09 Score=92.50 Aligned_cols=100 Identities=22% Similarity=0.253 Sum_probs=82.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCC-cccCHHh-------hh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGI-PVLTRED-------VV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~-~~~~~~~-------~~-----~~aDvvi~a 126 (243)
..+|++++|+|.|.+|+++++-+|+.|| +++.+|+|+.+.+.|...|+ +.+++.| .+ -+.|+-|||
T Consensus 190 v~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc 269 (375)
T KOG0022|consen 190 VEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFEC 269 (375)
T ss_pred cCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEe
Confidence 4689999999999999999999999999 89999999999999999997 4555432 22 279999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC--CCCChhH
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD--NEIDMLD 161 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~--~~id~~~ 161 (243)
+|+.+++. ++|...+.| |.-+.+|... .++....
T Consensus 270 ~G~~~~m~-~al~s~h~GwG~sv~iGv~~~~~~i~~~p 306 (375)
T KOG0022|consen 270 IGNVSTMR-AALESCHKGWGKSVVIGVAAAGQEISTRP 306 (375)
T ss_pred cCCHHHHH-HHHHHhhcCCCeEEEEEecCCCcccccch
Confidence 99999986 578888888 8888888764 3444443
No 57
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=98.94 E-value=6.8e-09 Score=93.66 Aligned_cols=140 Identities=17% Similarity=0.165 Sum_probs=93.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----Hh---hh--c
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----ED---VV--S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~~---~~--~ 118 (243)
++++.+. . ..+|++|+|.|+|++|+.+++.++.+|++ |++++.++.++..+...|++ +++. ++ .. .
T Consensus 150 ~~~~~~~-~-~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 150 LHAFHLA-Q-GCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence 4554333 2 35799999999999999999999999996 78899999888777777764 3221 11 11 2
Q ss_pred CCc-EEEEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChh---HHHHhhcCeEEEeecCeeee----EccCchhh
Q 037949 119 EAG-LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDML---DLEAYRGIKRITIKPQTDPW----VFPQTRRG 188 (243)
Q Consensus 119 ~aD-vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~---~l~~~~~~~~~~i~~~~~~~----~~~~~~~a 188 (243)
+.| ++++|+|....++ +.++.++++|+++.+|..... ++.. .+.. ++..+......+ ...+.+++
T Consensus 228 ~~d~~v~d~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~ 302 (347)
T PRK10309 228 RFDQLILETAGVPQTVE-LAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR----KELTVIGSWMNYSSPWPGQEWETA 302 (347)
T ss_pred CCCeEEEECCCCHHHHH-HHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh----cCcEEEEEeccccCCcchhHHHHH
Confidence 467 9999999887776 579999999999999965422 3321 2222 223343211111 01233447
Q ss_pred HHhhhcCCe
Q 037949 189 IIILAERLL 197 (243)
Q Consensus 189 i~ll~~G~i 197 (243)
++++++|++
T Consensus 303 ~~~~~~g~i 311 (347)
T PRK10309 303 SRLLTERKL 311 (347)
T ss_pred HHHHHcCCC
Confidence 788898886
No 58
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=98.92 E-value=1.1e-08 Score=94.67 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=78.9
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcccC------HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPVLT------REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~~~------~~~~----~- 117 (243)
.++++.+. . ..+|++|+|.|.|+||+.+++.++.+|++ |+++|.++.|+..+.+.|++.+. ..+. .
T Consensus 174 a~~a~~~~-~-~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~ 251 (393)
T TIGR02819 174 GYHGAVTA-G-VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILG 251 (393)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcC
Confidence 35666543 2 45799999999999999999999999997 45568888888888888875321 1121 1
Q ss_pred -cCCcEEEEccCCh--------------hcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENA--------------DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~--------------~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.+ ..++ +.++.++++|+++.+|.+
T Consensus 252 ~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 252 EPEVDCAVDCVGFEARGHGHDGKKEAPATVLN-SLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred CCCCcEEEECCCCccccccccccccchHHHHH-HHHHHhhCCCEEEEeeec
Confidence 2589999999986 3675 579999999999999986
No 59
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.91 E-value=7.2e-09 Score=95.26 Aligned_cols=92 Identities=22% Similarity=0.214 Sum_probs=73.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc----c---CHHhhhcCCcEEEEcc---CC-
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV----L---TREDVVSEAGLFVTTT---EN- 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~----~---~~~~~~~~aDvvi~a~---G~- 129 (243)
+++.+|+|+|+|.+|+.+++.++.+|++|+++|+++.+++.+.. .+..+ . ++.+.+.++|++|+|+ |.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 46688999999999999999999999999999999887655443 33321 1 2345677999999997 33
Q ss_pred -hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 -ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 -~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.+++.+.++.|++++++++++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 455788899999999999999865
No 60
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=98.91 E-value=1.4e-08 Score=92.74 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=78.7
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV---- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~---- 117 (243)
|+++.+... ..+|++|+|+|+|+||+.+++.++.+|+ +|+++|.++.+++.+...|++ +++. .+.+
T Consensus 174 ~~a~~~~~~-~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~ 252 (368)
T TIGR02818 174 IGAVLNTAK-VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT 252 (368)
T ss_pred HHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHh
Confidence 455533222 4579999999999999999999999999 799999999998888888874 3321 1111
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCC-eEEEEecCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
.++|++++|+|.+..+. +.++.++++ |+++.+|..
T Consensus 253 ~~g~d~vid~~G~~~~~~-~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 253 DGGVDYSFECIGNVNVMR-AALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHhhcCCCeEEEEecc
Confidence 26899999999877665 478888886 999999975
No 61
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=98.90 E-value=7.4e-09 Score=83.99 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=68.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch-hHHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI-CALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~-r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~~ 137 (243)
+++|+|.|+|||..|.+.|+.||..|.+|++..+... ....|.++|+++.+..|+++.+|+|+..+.. +.+...+.
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~I 81 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEEI 81 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHHH
Confidence 5799999999999999999999999999999888765 5678889999999999999999999988643 34444455
Q ss_pred HccCCCCeEEEEec
Q 037949 138 MKQMKNAAIVCNIG 151 (243)
Q Consensus 138 l~~l~~g~~vvnvg 151 (243)
...|++|..++..-
T Consensus 82 ~p~l~~G~~L~fah 95 (165)
T PF07991_consen 82 APNLKPGATLVFAH 95 (165)
T ss_dssp HHHS-TT-EEEESS
T ss_pred HhhCCCCCEEEeCC
Confidence 67899999888743
No 62
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=98.87 E-value=2.8e-08 Score=90.47 Aligned_cols=140 Identities=16% Similarity=0.060 Sum_probs=93.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccCH------HhhhcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLTR------EDVVSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~~------~~~~~~aDv 122 (243)
++++.+. ....+|++|+|.|.|+||+.+++.++.+|++|++++.++.++..+. ..|++ +++. .+...++|+
T Consensus 169 ~~al~~~-~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~ 247 (357)
T PLN02514 169 YSPLSHF-GLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDY 247 (357)
T ss_pred HHHHHHc-ccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcE
Confidence 4455332 2235799999999999999999999999999988888776654443 46764 2221 112246899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
+++|+|....++ +.++.++++|+++.+|... .+++...+.. ++..+.... .....+..+++.++++|++
T Consensus 248 vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~i~g~~-~~~~~~~~~~~~~~~~g~l 318 (357)
T PLN02514 248 IIDTVPVFHPLE-PYLSLLKLDGKLILMGVINTPLQFVTPMLML----GRKVITGSF-IGSMKETEEMLEFCKEKGL 318 (357)
T ss_pred EEECCCchHHHH-HHHHHhccCCEEEEECCCCCCCcccHHHHhh----CCcEEEEEe-cCCHHHHHHHHHHHHhCCC
Confidence 999999776665 4799999999999999754 2344444433 223343211 1122233447899999975
No 63
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=98.83 E-value=4.1e-08 Score=89.54 Aligned_cols=92 Identities=20% Similarity=0.232 Sum_probs=75.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|++++.++.++..+...|++ +++. .+.+ .++|++++|
T Consensus 184 ~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 263 (368)
T cd08300 184 VEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFEC 263 (368)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEEC
Confidence 3579999999999999999999999999 799999999998888888874 3321 1111 258999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
+|.+..++ +.++.++++ |+++.+|..
T Consensus 264 ~g~~~~~~-~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 264 IGNVKVMR-AALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CCChHHHH-HHHHhhccCCCeEEEEccC
Confidence 99876665 478889886 999999875
No 64
>PLN02827 Alcohol dehydrogenase-like
Probab=98.82 E-value=4e-08 Score=90.24 Aligned_cols=132 Identities=19% Similarity=0.224 Sum_probs=91.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ .|++++.++.+...+...|++ +++. .+.+ .++|++++|
T Consensus 191 ~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 270 (378)
T PLN02827 191 VSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFEC 270 (378)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 588889899988888888874 3321 1111 158999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCCC--CCChh-HHHHhhcCeEEEeecCeee-e-EccCchhhHHhhhcCCe
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFDN--EIDML-DLEAYRGIKRITIKPQTDP-W-VFPQTRRGIIILAERLL 197 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~~--~id~~-~l~~~~~~~~~~i~~~~~~-~-~~~~~~~ai~ll~~G~i 197 (243)
+|.+..+. ..++.++++ |+++.+|.... .++.. .+.. ++..+...... + ...+..++++++++|+|
T Consensus 271 ~G~~~~~~-~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i 342 (378)
T PLN02827 271 VGDTGIAT-TALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL----SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEI 342 (378)
T ss_pred CCChHHHH-HHHHhhccCCCEEEEECCcCCCccccccHHHHh----cCceEEeeecCCCchhhhHHHHHHHHHcCCC
Confidence 99877665 479999998 99999997642 23321 2222 22334321111 1 11133336789999988
No 65
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.78 E-value=4.9e-08 Score=82.41 Aligned_cols=85 Identities=24% Similarity=0.319 Sum_probs=66.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-CCcccCHHhhh-cCCcEEEEccCChhcccHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-GIPVLTREDVV-SEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-G~~~~~~~~~~-~~aDvvi~a~G~~~~i~~~ 136 (243)
+..++|++++|+|+|.+|+.+|+.|...|++|+++|+++.++...... |...++.++.. ..+|+++.|+.. +.++.+
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A~~-~~I~~~ 101 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCALG-GVINDD 101 (200)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEecccc-cccCHH
Confidence 336899999999999999999999999999999999998876554443 65555555554 379999988543 467777
Q ss_pred HHccCCCC
Q 037949 137 HMKQMKNA 144 (243)
Q Consensus 137 ~l~~l~~g 144 (243)
.++.++..
T Consensus 102 ~~~~l~~~ 109 (200)
T cd01075 102 TIPQLKAK 109 (200)
T ss_pred HHHHcCCC
Confidence 88888543
No 66
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.77 E-value=2.5e-08 Score=88.64 Aligned_cols=161 Identities=18% Similarity=0.148 Sum_probs=106.8
Q ss_pred hhccccc-hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-c-CH-----
Q 037949 43 LYGFRHS-LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-L-TR----- 113 (243)
Q Consensus 43 ~~~~~~~-~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-~-~~----- 113 (243)
++-|+.. ++.++++. +. .+|+.+.|+|+|++|....+.++++|++|+++|.++.+.+.+.+ +|++. + ..
T Consensus 162 PlLCaGITvYspLk~~-g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~ 239 (360)
T KOG0023|consen 162 PLLCAGITVYSPLKRS-GL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI 239 (360)
T ss_pred chhhcceEEeehhHHc-CC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence 4445544 34555554 33 49999999999999999999999999999999999855556665 78863 2 22
Q ss_pred -HhhhcCCcEEEEccC--ChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhh
Q 037949 114 -EDVVSEAGLFVTTTE--NADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRG 188 (243)
Q Consensus 114 -~~~~~~aDvvi~a~G--~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~a 188 (243)
+++...-|.+++++. +.+.++ ..++.+|++|.+|.+|....+ ++...+.. ..+.+....-+ ...+-+++
T Consensus 240 ~~~~~~~~dg~~~~v~~~a~~~~~-~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil----~~~~I~GS~vG-~~ket~E~ 313 (360)
T KOG0023|consen 240 MKAIMKTTDGGIDTVSNLAEHALE-PLLGLLKVNGTLVLVGLPEKPLKLDTFPLIL----GRKSIKGSIVG-SRKETQEA 313 (360)
T ss_pred HHHHHHhhcCcceeeeeccccchH-HHHHHhhcCCEEEEEeCcCCcccccchhhhc----ccEEEEeeccc-cHHHHHHH
Confidence 222344566666655 566676 479999999999999998644 44444433 33444321111 12232337
Q ss_pred HHhhhcCCeecccCCCCCccccccchHHHH
Q 037949 189 IIILAERLLMNLGCPTGHPSFVMSCSFTNQ 218 (243)
Q Consensus 189 i~ll~~G~ivNl~s~~g~p~~~~~~~~~~~ 218 (243)
+++.++|.| . .|.++..++.-..
T Consensus 314 Ldf~a~~~i---k----~~IE~v~~~~v~~ 336 (360)
T KOG0023|consen 314 LDFVARGLI---K----SPIELVKLSEVNE 336 (360)
T ss_pred HHHHHcCCC---c----CceEEEehhHHHH
Confidence 888888876 2 5677777776333
No 67
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=98.75 E-value=1.3e-07 Score=85.38 Aligned_cols=140 Identities=18% Similarity=0.157 Sum_probs=96.1
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VV- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~- 117 (243)
.|+++... . ..+|++|+|.|.|.+|..+++.++..|+ +|++++.++.+...+...|++ +++ ..+ ..
T Consensus 161 a~~~l~~~-~-~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~ 238 (351)
T cd08233 161 AWHAVRRS-G-FKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTG 238 (351)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhC
Confidence 35665332 2 3579999999999999999999999999 899999888887777667764 222 111 12
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhc
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAE 194 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~ 194 (243)
.++|++++++|....+. +.++.++++|+++.+|.... .++...+.. +...+.... .+...+..++++++++
T Consensus 239 ~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~g~~-~~~~~~~~~~~~~~~~ 312 (351)
T cd08233 239 GGGVDVSFDCAGVQATLD-TAIDALRPRGTAVNVAIWEKPISFNPNDLVL----KEKTLTGSI-CYTREDFEEVIDLLAS 312 (351)
T ss_pred CCCCCEEEECCCCHHHHH-HHHHhccCCCEEEEEccCCCCCccCHHHHHh----hCcEEEEEe-ccCcchHHHHHHHHHc
Confidence 24999999998766665 57899999999999997642 344433333 223343211 1222333447788899
Q ss_pred CCe
Q 037949 195 RLL 197 (243)
Q Consensus 195 G~i 197 (243)
|++
T Consensus 313 g~l 315 (351)
T cd08233 313 GKI 315 (351)
T ss_pred CCC
Confidence 987
No 68
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=98.73 E-value=1.3e-07 Score=86.16 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=75.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|+|+||+.+++.++.+|+ +|++++.++++.+.+...|++ +++. .+.+ .++|++++|
T Consensus 185 ~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~ 264 (369)
T cd08301 185 VKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFEC 264 (369)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 3589999999999999999999999999 899999999998888888864 3221 1111 258999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~ 154 (243)
+|.+..+. ..+..++++ ++++.+|...
T Consensus 265 ~G~~~~~~-~~~~~~~~~~g~~v~~g~~~ 292 (369)
T cd08301 265 TGNIDAMI-SAFECVHDGWGVTVLLGVPH 292 (369)
T ss_pred CCChHHHH-HHHHHhhcCCCEEEEECcCC
Confidence 99877665 478888996 9999999764
No 69
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.73 E-value=8e-08 Score=78.29 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=68.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH---H--HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV---R--HM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~---~--~l 138 (243)
++|.+||.|.+|..+|+.|...|.+|+++|+++++.......|+. +.++.++++.+|+|+.|..+...+.. . .+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 579999999999999999999999999999999988777777875 45688899999999999877543321 1 35
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..+++|.++++.+...
T Consensus 82 ~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGS-TTEEEEE-SS--
T ss_pred hccccceEEEecCCcc
Confidence 6678999999987654
No 70
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.71 E-value=7.1e-08 Score=85.38 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=68.4
Q ss_pred ccccccCcEEEEEcCChH-HHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGDV-GRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~I-G~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.|++|+|+|.|.+ |+.++..|...|++|++++... .++.+.++.||+|+.++|.++.++.
T Consensus 152 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t-------------~~l~~~~~~ADIVV~avG~~~~i~~- 217 (285)
T PRK14189 152 IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT-------------RDLAAHTRQADIVVAAVGKRNVLTA- 217 (285)
T ss_pred cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC-------------CCHHHHhhhCCEEEEcCCCcCccCH-
Confidence 455789999999999976 9999999999999999985432 2455667899999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|+..
T Consensus 218 --~~ik~gavVIDVGin~ 233 (285)
T PRK14189 218 --DMVKPGATVIDVGMNR 233 (285)
T ss_pred --HHcCCCCEEEEccccc
Confidence 5679999999999753
No 71
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.71 E-value=1.5e-07 Score=83.38 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=68.5
Q ss_pred cccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.|++|+|+|.|. +|+.+|..|...||+|++++.... ++.+.++.||+||.|+|.++.++.+
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------~l~~~~~~ADIVIsAvg~p~~i~~~- 218 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------DMASYLKDADVIVSAVGKPGLVTKD- 218 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------hHHHHHhhCCEEEECCCCCcccCHH-
Confidence 4568999999999997 999999999999999999976432 3456678999999999999999864
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
.+++|++|+++|...
T Consensus 219 --~vk~gavVIDvGi~~ 233 (286)
T PRK14175 219 --VVKEGAVIIDVGNTP 233 (286)
T ss_pred --HcCCCcEEEEcCCCc
Confidence 468999999999853
No 72
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=98.68 E-value=1.3e-07 Score=85.83 Aligned_cols=101 Identities=13% Similarity=0.133 Sum_probs=76.7
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCc-ccC------HHhhh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIP-VLT------REDVV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~-~~~------~~~~~--- 117 (243)
.|+++..... ..+|++|+|.|+ |+||+.+++.++.+|++|++++.++.+...+. ..|++ +++ ..+.+
T Consensus 146 A~~al~~~~~-~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~ 224 (348)
T PLN03154 146 AYAGFYEVCS-PKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRY 224 (348)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHH
Confidence 3555543222 358999999999 89999999999999999999998888876665 57874 222 22222
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|.. .+. ..++.++++|+++.+|..
T Consensus 225 ~~~gvD~v~d~vG~~-~~~-~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 225 FPEGIDIYFDNVGGD-MLD-AALLNMKIHGRIAVCGMV 260 (348)
T ss_pred CCCCcEEEEECCCHH-HHH-HHHHHhccCCEEEEECcc
Confidence 2589999999874 454 579999999999999865
No 73
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.66 E-value=2.4e-07 Score=83.61 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=78.1
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
++++.+. . ..+|++|+|.|+|+||+.+++.++.+|+ .|++++.++.+...+...|++ +++ ..+ ..
T Consensus 156 ~~~~~~~-~-~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~ 233 (351)
T cd08285 156 FHGAELA-N-IKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGG 233 (351)
T ss_pred HHHHHcc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCC
Confidence 4554333 2 4579999999999999999999999999 588899998888777777864 222 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|....+. +.++.++++|+++.+|...
T Consensus 234 ~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 269 (351)
T cd08285 234 KGVDAVIIAGGGQDTFE-QALKVLKPGGTISNVNYYG 269 (351)
T ss_pred CCCcEEEECCCCHHHHH-HHHHHhhcCCEEEEecccC
Confidence 35899999999876665 5789999999999998764
No 74
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.64 E-value=2.4e-07 Score=82.18 Aligned_cols=81 Identities=25% Similarity=0.323 Sum_probs=67.3
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++|+|+|.|. +|+.++..|...|++|+++++... ++.+.++++|++|.|+|.+..+..
T Consensus 153 ~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-------------~L~~~~~~aDIvI~AtG~~~~v~~- 218 (283)
T PRK14192 153 YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-------------NLPELVKQADIIVGAVGKPELIKK- 218 (283)
T ss_pred cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-------------hHHHHhccCCEEEEccCCCCcCCH-
Confidence 34568999999999997 999999999999999999976322 234456799999999998887764
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+.++++++|+++|...
T Consensus 219 --~~lk~gavViDvg~n~ 234 (283)
T PRK14192 219 --DWIKQGAVVVDAGFHP 234 (283)
T ss_pred --HHcCCCCEEEEEEEee
Confidence 3479999999999864
No 75
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.64 E-value=2.1e-07 Score=76.55 Aligned_cols=78 Identities=22% Similarity=0.271 Sum_probs=65.9
Q ss_pred cccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.|++|+|+|+|. +|..+++.|...|++|++++++.. ++.+.+.++|+||.|++.+++++.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-------------~l~~~l~~aDiVIsat~~~~ii~~~~-- 105 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-------------NLKEHTKQADIVIVAVGKPGLVKGDM-- 105 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-------------hHHHHHhhCCEEEEcCCCCceecHHH--
Confidence 57999999999997 599999999999999999987643 23456789999999999988887653
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
++++.+++++|...
T Consensus 106 -~~~~~viIDla~pr 119 (168)
T cd01080 106 -VKPGAVVIDVGINR 119 (168)
T ss_pred -ccCCeEEEEccCCC
Confidence 57789999999864
No 76
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=98.62 E-value=3.2e-07 Score=74.77 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=58.5
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.||+|+|+|.+ .+|+.++..|...|+.|++++.... ++.+.++.||+||.++|.++.+..
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~-------------~l~~~~~~ADIVVsa~G~~~~i~~-- 95 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK-------------NLQEITRRADIVVSAVGKPNLIKA-- 95 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS-------------SHHHHHTTSSEEEE-SSSTT-B-G--
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC-------------cccceeeeccEEeeeecccccccc--
Confidence 446899999999999 6999999999999999999976543 344567899999999999999874
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++|+++|...
T Consensus 96 -~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 96 -DWIKPGAVVIDVGINY 111 (160)
T ss_dssp -GGS-TTEEEEE--CEE
T ss_pred -ccccCCcEEEecCCcc
Confidence 4679999999999853
No 77
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.61 E-value=3.3e-07 Score=85.70 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=74.9
Q ss_pred hhhhhhhccc--cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhhcCCcccC---HHhhhcCCcEE
Q 037949 51 PDGLMRATDI--TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALTEGIPVLT---REDVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~--~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~~G~~~~~---~~~~~~~aDvv 123 (243)
.+++..+... .+.|++|+|+|+|+||+.+++.++..|+ +|+++++++.+.. .+...|..+.+ ..+.+.++|+|
T Consensus 167 ~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvV 246 (423)
T PRK00045 167 SAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIV 246 (423)
T ss_pred HHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEE
Confidence 3566544321 3689999999999999999999999998 8999999988754 34445544433 34456789999
Q ss_pred EEccCChh-cccHHHHccC-----CCCeEEEEecCC
Q 037949 124 VTTTENAD-IIMVRHMKQM-----KNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~-~i~~~~l~~l-----~~g~~vvnvg~~ 153 (243)
|+|||+++ .++.+.+..+ +...++++.+..
T Consensus 247 I~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 247 ISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred EECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCC
Confidence 99998765 4655556443 245678888865
No 78
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.61 E-value=2.6e-07 Score=82.38 Aligned_cols=81 Identities=23% Similarity=0.234 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|.| .+|+.+|..|...|++|++++.... ++.+..+.||+|+.|+|.++.+..
T Consensus 152 ~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------~l~e~~~~ADIVIsavg~~~~v~~ 218 (301)
T PRK14194 152 DTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------DAKALCRQADIVVAAVGRPRLIDA 218 (301)
T ss_pred HhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------CHHHHHhcCCEEEEecCChhcccH
Confidence 34557899999999997 9999999999999999999976542 456667899999999999999875
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
. + +++|++|+++|+.
T Consensus 219 ~-~--ik~GaiVIDvgin 233 (301)
T PRK14194 219 D-W--LKPGAVVIDVGIN 233 (301)
T ss_pred h-h--ccCCcEEEEeccc
Confidence 3 3 7999999999975
No 79
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.61 E-value=1.8e-07 Score=74.05 Aligned_cols=93 Identities=25% Similarity=0.303 Sum_probs=68.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcC---CcccCH---HhhhcCCcEEEEccCCh-h
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEG---IPVLTR---EDVVSEAGLFVTTTENA-D 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G---~~~~~~---~~~~~~aDvvi~a~G~~-~ 131 (243)
.+++++++|+|+|++|+.++..|...|+ +|++++++.+++.... ..+ +...+. .+.+..+|+||.||+.+ .
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 4789999999999999999999999999 5999999988764433 222 223333 34567899999998765 3
Q ss_pred cccHHHHccCCCC-eEEEEecCC
Q 037949 132 IIMVRHMKQMKNA-AIVCNIGHF 153 (243)
Q Consensus 132 ~i~~~~l~~l~~g-~~vvnvg~~ 153 (243)
.++.+.+....+. .+++..+..
T Consensus 89 ~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 89 IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp SSTHHHHTTTCHHCSEEEES-SS
T ss_pred ccCHHHHHHHHhhhhceeccccC
Confidence 5666667655433 488898865
No 80
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=98.61 E-value=2.6e-07 Score=85.71 Aligned_cols=131 Identities=11% Similarity=0.032 Sum_probs=87.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhhc--------CCc--ccC------HHhh----
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGA---RVMGTEIDLICALQALTE--------GIP--VLT------REDV---- 116 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~~--------G~~--~~~------~~~~---- 116 (243)
..+|++|+|+| .|+||+.+++.++.+|+ +|+++|.++.|++.+... |++ +++ ..+.
T Consensus 173 ~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 173 IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHH
Confidence 35789999998 59999999999999764 799999999998887775 543 222 1111
Q ss_pred h--cCCcEEEEccCChhcccHHHHccCCCCeEEEEe-cCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhH
Q 037949 117 V--SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNI-GHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGI 189 (243)
Q Consensus 117 ~--~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnv-g~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai 189 (243)
. .++|++++++|.+..+. +.++.++++|.++.+ |..+ .+++...+.. ++..+.. +......+.++++
T Consensus 253 t~g~g~D~vid~~g~~~~~~-~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~ 326 (410)
T cd08238 253 TGGQGFDDVFVFVPVPELVE-EADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY----NNTHYVG-TSGGNTDDMKEAI 326 (410)
T ss_pred hCCCCCCEEEEcCCCHHHHH-HHHHHhccCCeEEEEEccCCCCccccccHHHhhh----cCcEEEE-eCCCCHHHHHHHH
Confidence 1 25899999999877776 478999877766654 4321 2344433333 3333432 1111222334478
Q ss_pred HhhhcCCe
Q 037949 190 IILAERLL 197 (243)
Q Consensus 190 ~ll~~G~i 197 (243)
+++++|++
T Consensus 327 ~li~~g~i 334 (410)
T cd08238 327 DLMAAGKL 334 (410)
T ss_pred HHHHcCCC
Confidence 99999986
No 81
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=98.60 E-value=3.1e-07 Score=83.69 Aligned_cols=93 Identities=22% Similarity=0.273 Sum_probs=74.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.+++.+...|++ +++. .+.+ .+.|++++|
T Consensus 182 ~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~ 261 (365)
T cd08277 182 VEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFEC 261 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEEC
Confidence 4689999999999999999999999999 799999999988888777864 2221 1111 268999999
Q ss_pred cCChhcccHHHHccCCCC-eEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNA-AIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g-~~vvnvg~~~ 154 (243)
+|....+. +.++.++++ |+++.+|...
T Consensus 262 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 289 (365)
T cd08277 262 TGNADLMN-EALESTKLGWGVSVVVGVPP 289 (365)
T ss_pred CCChHHHH-HHHHhcccCCCEEEEEcCCC
Confidence 99877665 478889875 9999999753
No 82
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=98.56 E-value=4.2e-07 Score=82.18 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=68.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEEccCCh---hcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVTTTENA---DIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~---~~i~~~ 136 (243)
.++|++|.|||+|.+|.++|+.|+..|.+|++.++++.+ ...+...|+.+.+..++++.+|+|+.++... .+++.+
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 478999999999999999999999999999988776443 3345566877668888899999999997542 334334
Q ss_pred HHccCCCCeEEE
Q 037949 137 HMKQMKNAAIVC 148 (243)
Q Consensus 137 ~l~~l~~g~~vv 148 (243)
.+..++++.+++
T Consensus 94 I~~~Lk~g~iL~ 105 (330)
T PRK05479 94 IEPNLKEGAALA 105 (330)
T ss_pred HHhcCCCCCEEE
Confidence 566788888774
No 83
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.55 E-value=4.6e-07 Score=80.21 Aligned_cols=81 Identities=26% Similarity=0.234 Sum_probs=68.1
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|.| .+|+.+|..|...||.|++++.... ++.+.++.||+|+.|+|.++.++.
T Consensus 150 ~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~-------------~l~~~~~~ADIvV~AvG~p~~i~~ 216 (285)
T PRK14191 150 HYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK-------------DLSFYTQNADIVCVGVGKPDLIKA 216 (285)
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-------------HHHHHHHhCCEEEEecCCCCcCCH
Confidence 34556899999999999 8999999999999999999855332 234567899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++++|++|+++|+.
T Consensus 217 ~---~vk~GavVIDvGi~ 231 (285)
T PRK14191 217 S---MVKKGAVVVDIGIN 231 (285)
T ss_pred H---HcCCCcEEEEeecc
Confidence 5 45999999999975
No 84
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.55 E-value=4.7e-07 Score=80.18 Aligned_cols=80 Identities=26% Similarity=0.307 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.|++|+|+|.+. +|+.++..|...||.|++++... .++.+.++.||++|.|+|.++.++.+
T Consensus 158 ~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvv~AvG~p~~i~~~ 224 (287)
T PRK14176 158 YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT-------------DDLKKYTLDADILVVATGVKHLIKAD 224 (287)
T ss_pred cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC-------------CCHHHHHhhCCEEEEccCCccccCHH
Confidence 34568999999999996 99999999999999999997432 23556678999999999999999754
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++++|++|+++|+.
T Consensus 225 ---~vk~gavVIDvGin 238 (287)
T PRK14176 225 ---MVKEGAVIFDVGIT 238 (287)
T ss_pred ---HcCCCcEEEEeccc
Confidence 67999999999984
No 85
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=98.54 E-value=6.3e-07 Score=80.40 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=78.3
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh---hcCCc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV---VSEAG 121 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~---~~~aD 121 (243)
++++... . ..+|++|+|.|.|++|+.+++.++.+|++|++++.++.++..+...|++ +++ ..+. ..+.|
T Consensus 153 ~~~~~~~-~-~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d 230 (333)
T cd08296 153 FNALRNS-G-AKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAK 230 (333)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCC
Confidence 4555433 2 4579999999999999999999999999999999998888777777764 222 1111 24689
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++++++|....+. ..++.++++|+++.+|...
T Consensus 231 ~vi~~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (333)
T cd08296 231 LILATAPNAKAIS-ALVGGLAPRGKLLILGAAG 262 (333)
T ss_pred EEEECCCchHHHH-HHHHHcccCCEEEEEecCC
Confidence 9999987666665 4789999999999998764
No 86
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=98.53 E-value=8.8e-07 Score=70.69 Aligned_cols=81 Identities=21% Similarity=0.256 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ .+|+.++..|...|++|++++.+.. ++++.++.||+|+.++|.++.++.
T Consensus 22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------~l~~~v~~ADIVvsAtg~~~~i~~- 87 (140)
T cd05212 22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------QLQSKVHDADVVVVGSPKPEKVPT- 87 (140)
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------CHHHHHhhCCEEEEecCCCCccCH-
Confidence 3456899999999999 7999999999999999999976432 345567899999999999988875
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|++++++|...
T Consensus 88 --~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 88 --EWIKPGATVINCSPTK 103 (140)
T ss_pred --HHcCCCCEEEEcCCCc
Confidence 3579999999988764
No 87
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.53 E-value=5.4e-07 Score=84.16 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=69.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHH-HHhhcCCcccC---HHhhhcCCcEEEEccCChh-ccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICAL-QALTEGIPVLT---REDVVSEAGLFVTTTENAD-IIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~-~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~~-~i~ 134 (243)
.++|++|+|+|+|+||+.+++.|+..| .+|+++++++.+.. .+...|....+ ..+.+.++|+||+|||.++ +++
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~ 256 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVS 256 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEc
Confidence 368999999999999999999999999 58999999988753 34444543333 3456779999999998764 566
Q ss_pred HHHHccCC----CCeEEEEecCC
Q 037949 135 VRHMKQMK----NAAIVCNIGHF 153 (243)
Q Consensus 135 ~~~l~~l~----~g~~vvnvg~~ 153 (243)
.+.+..+. ...++++.+..
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~P 279 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVP 279 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC
Confidence 66665542 23478888864
No 88
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.52 E-value=1e-07 Score=82.02 Aligned_cols=138 Identities=18% Similarity=0.190 Sum_probs=82.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCC-cccCHHhhhcCCcEEEEccCChhcccH--H
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALT-EGI-PVLTREDVVSEAGLFVTTTENADIIMV--R 136 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~-~~~~~~~~~~~aDvvi~a~G~~~~i~~--~ 136 (243)
+.+|.++|+|+. +||.++|+.|...|++|+.+.+..+|++..+. .+. .+. ....||- +-.....++.. +
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~-----~~~~DVt-D~~~~~~~i~~~~~ 77 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAAL-----ALALDVT-DRAAVEAAIEALPE 77 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceE-----EEeeccC-CHHHHHHHHHHHHH
Confidence 568999999998 99999999999999999999999998754332 231 000 0011111 00011112221 2
Q ss_pred HHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccCCCCCccc
Q 037949 137 HMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGCPTGHPSF 209 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s~~g~p~~ 209 (243)
.+. +-+.+|+|+|... .+.+.++|..- +..|+.+..+.... +++.| ..|.|||++|+.|+-.+
T Consensus 78 ~~g--~iDiLvNNAGl~~g~~~~~~~~~dw~~M-------id~Ni~G~l~~~~a-vLP~m~~r~~G~IiN~~SiAG~~~y 147 (246)
T COG4221 78 EFG--RIDILVNNAGLALGDPLDEADLDDWDRM-------IDTNVKGLLNGTRA-VLPGMVERKSGHIINLGSIAGRYPY 147 (246)
T ss_pred hhC--cccEEEecCCCCcCChhhhCCHHHHHHH-------HHHHHHHHHHHHHH-hhhHHHhcCCceEEEeccccccccC
Confidence 344 4589999999764 23455555431 33444433332223 55544 34899999998876555
Q ss_pred cccchH
Q 037949 210 VMSCSF 215 (243)
Q Consensus 210 ~~~~~~ 215 (243)
--...|
T Consensus 148 ~~~~vY 153 (246)
T COG4221 148 PGGAVY 153 (246)
T ss_pred CCCccc
Confidence 444443
No 89
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.52 E-value=5.5e-07 Score=79.71 Aligned_cols=80 Identities=26% Similarity=0.226 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|.|. +|+.++..|...||.|++++... .++.+.++.||++|.++|.++.+..
T Consensus 153 ~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvi~avG~p~~v~~- 218 (285)
T PRK10792 153 YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------KNLRHHVRNADLLVVAVGKPGFIPG- 218 (285)
T ss_pred cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------CCHHHHHhhCCEEEEcCCCcccccH-
Confidence 35568999999999996 99999999999999999996542 2455667899999999999999875
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
+.+++|++|+++|+.
T Consensus 219 --~~vk~gavVIDvGin 233 (285)
T PRK10792 219 --EWIKPGAIVIDVGIN 233 (285)
T ss_pred --HHcCCCcEEEEcccc
Confidence 457999999999975
No 90
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.52 E-value=9.6e-07 Score=79.35 Aligned_cols=104 Identities=20% Similarity=0.236 Sum_probs=73.3
Q ss_pred hhhhhhhccc--cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhH-HHHhhcCCcccC---HHhhhcCCcEE
Q 037949 51 PDGLMRATDI--TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICA-LQALTEGIPVLT---REDVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~--~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~-~~a~~~G~~~~~---~~~~~~~aDvv 123 (243)
.+++..+... .+.+++|+|+|+|+||+.+++.++..|+ +|+++++++.+. ..+...|..+.+ ..+.+.++|+|
T Consensus 163 ~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvV 242 (311)
T cd05213 163 SAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVV 242 (311)
T ss_pred HHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEE
Confidence 3566544321 2579999999999999999999999886 799999998865 345556665444 34556789999
Q ss_pred EEccCChhc--ccHHHHccC-CCCeEEEEecCCC
Q 037949 124 VTTTENADI--IMVRHMKQM-KNAAIVCNIGHFD 154 (243)
Q Consensus 124 i~a~G~~~~--i~~~~l~~l-~~g~~vvnvg~~~ 154 (243)
|.|++.++. +....++.. +++.++++.+.+.
T Consensus 243 i~at~~~~~~~~~~~~~~~~~~~~~~viDlavPr 276 (311)
T cd05213 243 ISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPR 276 (311)
T ss_pred EECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 999998765 112233333 2466888888653
No 91
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=98.51 E-value=5.9e-07 Score=75.16 Aligned_cols=90 Identities=23% Similarity=0.248 Sum_probs=69.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCc-c--cC----HHhhhcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIP-V--LT----REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~-~--~~----~~~~~~~aDvvi~a~G~~ 130 (243)
.+.||+|+|+|-+ -+|+.++..|...||.|+++|.+.... +.. ..... + .+ +.+.++.||+||.++|.+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~-~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~ 137 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV-FTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSP 137 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc-cccccccccccccccchhhHHHHHhhhCCEEEEccCCC
Confidence 5899999999999 799999999999999999998765422 110 01111 1 12 456678999999999999
Q ss_pred hc-ccHHHHccCCCCeEEEEecCCC
Q 037949 131 DI-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. +..+ ++|+|++|+++|...
T Consensus 138 ~~~i~~d---~ik~GavVIDVGi~~ 159 (197)
T cd01079 138 NYKVPTE---LLKDGAICINFASIK 159 (197)
T ss_pred CCccCHH---HcCCCcEEEEcCCCc
Confidence 98 8754 468999999999874
No 92
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=98.50 E-value=7e-07 Score=79.74 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=77.0
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~~---- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+.+.+...|++ +++ ..+.+
T Consensus 126 A~~~l~~~~~-~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02825 126 AYFGLLEICG-VKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS 204 (325)
T ss_pred HHHHHHHHhC-CCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC
Confidence 3455433222 358999999995 8999999999999999999999888888778778874 222 11211
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++++|... +. ..++.++++|+++.+|..
T Consensus 205 ~~gvdvv~d~~G~~~-~~-~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 205 PDGYDCYFDNVGGEF-SN-TVIGQMKKFGRIAICGAI 239 (325)
T ss_pred CCCeEEEEECCCHHH-HH-HHHHHhCcCcEEEEecch
Confidence 25899999998754 43 579999999999999864
No 93
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=98.48 E-value=1e-06 Score=72.23 Aligned_cols=91 Identities=21% Similarity=0.269 Sum_probs=66.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc---cc-------------------C-----HH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP---VL-------------------T-----RE 114 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~---~~-------------------~-----~~ 114 (243)
++..+|+|+|+|.+|+.++..|+.+|++|++.|.++.+.......+.. +. . +.
T Consensus 18 ~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 18 VPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp E-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 566899999999999999999999999999999998876555444432 21 1 23
Q ss_pred hhhcCCcEEEEcc-----CChhcccHHHHccCCCCeEEEEecC
Q 037949 115 DVVSEAGLFVTTT-----ENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 115 ~~~~~aDvvi~a~-----G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
+.+..+|+++.+. ..|.+++.+.++.|+++.+++.++.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 3456899998652 3567899999999999999998764
No 94
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=98.48 E-value=2.2e-06 Score=77.51 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=75.7
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|.| +|.+|..+.+.++++|++++++..++++.+.+.+.|++ +++ +.+.+
T Consensus 130 A~~~l~~~~~-l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAG-LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 3555554222 35699999999 67999999999999998776666666666677788885 443 33332
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.|+|+++.|.... . +.+..++++|+++.+|...
T Consensus 209 g~gvDvv~D~vG~~~~-~-~~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 209 GKGVDVVLDTVGGDTF-A-ASLAALAPGGRLVSIGALS 244 (326)
T ss_pred CCCceEEEECCCHHHH-H-HHHHHhccCCEEEEEecCC
Confidence 269999999988653 3 3688899999999988753
No 95
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.48 E-value=1.1e-06 Score=70.14 Aligned_cols=104 Identities=24% Similarity=0.209 Sum_probs=71.6
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHh-hcCC-----cccCHHhhhcCCcE
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQAL-TEGI-----PVLTREDVVSEAGL 122 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~-~~G~-----~~~~~~~~~~~aDv 122 (243)
+..++++. +....+++++|+|+|.+|..+++.++..| .+|+++|+++.+..... ..+. ...+..+.+.++|+
T Consensus 6 ~~~a~~~~-~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 84 (155)
T cd01065 6 FVRALEEA-GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADL 84 (155)
T ss_pred HHHHHHhh-CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCE
Confidence 34455543 33467899999999999999999999996 68999999987754433 2232 23345556789999
Q ss_pred EEEccCChhc-ccHH--HHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADI-IMVR--HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~-i~~~--~l~~l~~g~~vvnvg~~~ 154 (243)
|+.|++.... .... ....++++..+++++..+
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 9999865432 1100 112357888999887764
No 96
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=98.47 E-value=9e-07 Score=78.48 Aligned_cols=89 Identities=17% Similarity=0.147 Sum_probs=70.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RHM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~l 138 (243)
+|.|||+|.+|..+|..+...|.+|+++|+++.+...+...|.. ..+..++++++|+|+.|......+.. ..+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~ 80 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGII 80 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHh
Confidence 48999999999999999999999999999999887666666764 34567788899999999765432221 134
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.+++|.+...
T Consensus 81 ~~~~~g~iivd~st~~ 96 (291)
T TIGR01505 81 EGAKPGKTLVDMSSIS 96 (291)
T ss_pred hcCCCCCEEEECCCCC
Confidence 5678899999987654
No 97
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=98.47 E-value=3e-06 Score=75.16 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=88.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhh--hcCCcEEEEccCChhcccHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDV--VSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~--~~~aDvvi~a~G~~~~i~~~~ 137 (243)
..+|++++|.|.|.+|+.+++.++.+|++|++++.++.+...+...|+.. .+..+. -...|++++|+|....+. ..
T Consensus 153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-~~ 231 (319)
T cd08242 153 ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLE-LA 231 (319)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHH-HH
Confidence 45799999999999999999999999999999998888887777778752 222221 136899999998765554 46
Q ss_pred HccCCCCeEEEEecCCC--CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 138 MKQMKNAAIVCNIGHFD--NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~--~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++.++++|.++..+... ..++...+.. ++..+.. .. ....++++.++++|++
T Consensus 232 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~i~~-~~---~~~~~~~~~~~~~~~l 285 (319)
T cd08242 232 LRLVRPRGTVVLKSTYAGPASFDLTKAVV----NEITLVG-SR---CGPFAPALRLLRKGLV 285 (319)
T ss_pred HHHhhcCCEEEEEcccCCCCccCHHHhee----cceEEEE-Ee---cccHHHHHHHHHcCCC
Confidence 88889999999877543 2344333222 2232321 11 1112337788888876
No 98
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=98.47 E-value=1.8e-06 Score=77.63 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=92.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------hhhcCCcEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------DVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------~~~~~aDvv 123 (243)
++++.+. . ..+|.+++|.|.|++|+.+++.++.+|++|++++.++.+...+...|++ +++.. ..-.++|++
T Consensus 159 ~~~~~~~-~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v 236 (337)
T cd05283 159 YSPLKRN-G-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLI 236 (337)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEE
Confidence 4444433 2 3578999999999999999999999999999999988877777667764 32211 112468999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCCCCC--CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCCe
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHFDNE--IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERLL 197 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~--id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~i 197 (243)
++|+|....+. +.++.++++++++.+|..+.. ++...+.. +...+.... .+...+.++.+.++.+|++
T Consensus 237 ~~~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~~~~~~~l 306 (337)
T cd05283 237 IDTVSASHDLD-PYLSLLKPGGTLVLVGAPEEPLPVPPFPLIF----GRKSVAGSL-IGGRKETQEMLDFAAEHGI 306 (337)
T ss_pred EECCCCcchHH-HHHHHhcCCCEEEEEeccCCCCccCHHHHhc----CceEEEEec-ccCHHHHHHHHHHHHhCCC
Confidence 99998765454 578999999999999876422 34333222 223333211 1122333436677788875
No 99
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.47 E-value=9.6e-07 Score=77.92 Aligned_cols=81 Identities=26% Similarity=0.282 Sum_probs=68.7
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ .+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 ~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~~ 218 (278)
T PRK14172 152 LNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------KNLKEVCKKADILVVAIGRPKFIDEE 218 (278)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCHH
Confidence 4556899999999999 799999999999999999996432 24556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 219 ---~ik~gavVIDvGin~ 233 (278)
T PRK14172 219 ---YVKEGAIVIDVGTSS 233 (278)
T ss_pred ---HcCCCcEEEEeeccc
Confidence 468999999999763
No 100
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.47 E-value=1e-06 Score=78.07 Aligned_cols=82 Identities=21% Similarity=0.284 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||++|.++|.++.++.
T Consensus 151 ~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------~~l~~~~~~ADIvI~AvG~p~~i~~ 217 (284)
T PRK14190 151 EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------KNLAELTKQADILIVAVGKPKLITA 217 (284)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------hhHHHHHHhCCEEEEecCCCCcCCH
Confidence 34556899999999999 799999999999999999996432 2355667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+. +++|++|+++|+..
T Consensus 218 ~~---ik~gavVIDvGi~~ 233 (284)
T PRK14190 218 DM---VKEGAVVIDVGVNR 233 (284)
T ss_pred HH---cCCCCEEEEeeccc
Confidence 54 58999999999863
No 101
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=98.47 E-value=3e-07 Score=85.71 Aligned_cols=90 Identities=20% Similarity=0.188 Sum_probs=73.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEE------EeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCC--hhc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMG------TEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTEN--ADI 132 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v------~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~--~~~ 132 (243)
.++||+|+|+|+|.||.+.|..++..|.+|++ +|.+......|...|+.+.+..++++.||+|+.++.. .+.
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~~ 112 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 112 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHHH
Confidence 47999999999999999999999999999984 4444444556777899888889999999999988643 334
Q ss_pred ccHHHHccCCCCeEEEEe
Q 037949 133 IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnv 150 (243)
+..+.+..||+|+.+...
T Consensus 113 v~~~i~p~LK~Ga~L~fs 130 (487)
T PRK05225 113 VVRAVQPLMKQGAALGYS 130 (487)
T ss_pred HHHHHHhhCCCCCEEEec
Confidence 556789999999998864
No 102
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.46 E-value=9.7e-07 Score=78.09 Aligned_cols=82 Identities=29% Similarity=0.267 Sum_probs=68.9
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.++|.++.++.
T Consensus 150 ~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~~~~i~~ 216 (284)
T PRK14170 150 STGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------KDLPQVAKEADILVVATGLAKFVKK 216 (284)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34557899999999999 799999999999999999985432 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 217 ~---~vk~GavVIDvGin~ 232 (284)
T PRK14170 217 D---YIKPGAIVIDVGMDR 232 (284)
T ss_pred H---HcCCCCEEEEccCcc
Confidence 4 468999999999863
No 103
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.46 E-value=1.1e-06 Score=77.80 Aligned_cols=81 Identities=21% Similarity=0.260 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ .+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 152 ~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T-------------~~l~~~~~~ADIvIsAvGk~~~i~~ 218 (284)
T PRK14177 152 EYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT-------------QNLPSIVRQADIIVGAVGKPEFIKA 218 (284)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEeCCCcCccCH
Confidence 34557899999999999 799999999999999999996432 2355667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++|+|++|+++|+.
T Consensus 219 ~---~ik~gavVIDvGin 233 (284)
T PRK14177 219 D---WISEGAVLLDAGYN 233 (284)
T ss_pred H---HcCCCCEEEEecCc
Confidence 4 46899999999985
No 104
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.44 E-value=1.1e-06 Score=77.82 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=68.3
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 152 ~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T-------------~~L~~~~~~ADIvV~AvGkp~~i~~ 218 (288)
T PRK14171 152 KYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT-------------HNLSSITSKADIVVAAIGSPLKLTA 218 (288)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCCCccCH
Confidence 34557899999999999 799999999999999999986422 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+ ++|+|++|+++|+.
T Consensus 219 ~---~vk~GavVIDvGin 233 (288)
T PRK14171 219 E---YFNPESIVIDVGIN 233 (288)
T ss_pred H---HcCCCCEEEEeecc
Confidence 4 46899999999975
No 105
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.44 E-value=1.3e-06 Score=77.31 Aligned_cols=81 Identities=26% Similarity=0.277 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.+
T Consensus 150 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~p~~i~~~ 216 (282)
T PRK14169 150 YDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT-------------RNLKQLTKEADILVVAVGVPHFIGAD 216 (282)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 4556899999999999 799999999999999999985432 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 217 ---~vk~GavVIDvGin~ 231 (282)
T PRK14169 217 ---AVKPGAVVIDVGISR 231 (282)
T ss_pred ---HcCCCcEEEEeeccc
Confidence 568999999999863
No 106
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=98.43 E-value=3.2e-06 Score=77.59 Aligned_cols=93 Identities=25% Similarity=0.231 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC--------HHh----hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT--------RED----VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~--------~~~----~~--~~aDvvi 124 (243)
..+|++|+|.|.|++|+.+++.++.+|+ +|++++.++.+...+...|++ +++ ..+ .. .+.|+++
T Consensus 201 ~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 201 FRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 4579999999999999999999999999 799999888887777777763 221 111 11 3689999
Q ss_pred EccCCh-hcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENA-DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~-~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|.+ ..+. +.++.++++|+++++|...
T Consensus 281 d~~g~~~~~~~-~~~~~l~~~G~~v~~g~~~ 310 (384)
T cd08265 281 EAAGAPPATIP-QMEKSIAINGKIVYIGRAA 310 (384)
T ss_pred ECCCCcHHHHH-HHHHHHHcCCEEEEECCCC
Confidence 999864 3443 5688889999999998654
No 107
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.43 E-value=1.4e-06 Score=77.08 Aligned_cols=80 Identities=26% Similarity=0.291 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 151 y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T-------------~nl~~~~~~ADIvIsAvGkp~~i~~~ 217 (282)
T PRK14166 151 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLLRSD 217 (282)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCHH
Confidence 4556899999999999 799999999999999999986532 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++|+|++|+++|+.
T Consensus 218 ---~vk~GavVIDvGin 231 (282)
T PRK14166 218 ---MVKEGVIVVDVGIN 231 (282)
T ss_pred ---HcCCCCEEEEeccc
Confidence 46899999999975
No 108
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=98.42 E-value=1.5e-06 Score=77.13 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=72.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
+|.+||.|.+|..+|+.|...|.+|.++|+++++ .+.+...|.. ..++.++..++|+||.|.++...+.. ..
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~ 81 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGL 81 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccch
Confidence 6899999999999999999999999999999988 5555566876 45677888999999999877544321 24
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
++.+++|.++|+.+..+
T Consensus 82 ~~~~~~G~i~IDmSTis 98 (286)
T COG2084 82 LEGLKPGAIVIDMSTIS 98 (286)
T ss_pred hhcCCCCCEEEECCCCC
Confidence 56778999999987654
No 109
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.42 E-value=1.4e-06 Score=76.91 Aligned_cols=82 Identities=24% Similarity=0.230 Sum_probs=68.2
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|.+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.
T Consensus 150 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T-------------~~l~~~~~~ADIvV~AvGkp~~i~~ 216 (281)
T PRK14183 150 EYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT-------------KDLKAHTKKADIVIVGVGKPNLITE 216 (281)
T ss_pred HcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEEEecCcccccCH
Confidence 34557899999999999 899999999999999999885422 1345567899999999999999976
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++++|++|+++|+..
T Consensus 217 ~---~vk~gavvIDvGin~ 232 (281)
T PRK14183 217 D---MVKEGAIVIDIGINR 232 (281)
T ss_pred H---HcCCCcEEEEeeccc
Confidence 4 468999999999753
No 110
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.42 E-value=1.5e-06 Score=77.03 Aligned_cols=82 Identities=24% Similarity=0.255 Sum_probs=68.7
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|.+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.
T Consensus 148 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~ 214 (287)
T PRK14173 148 HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT-------------QDLPAVTRRADVLVVAVGRPHLITP 214 (287)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34556899999999999 799999999999999999985432 2455667899999999999999976
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 215 ~---~vk~GavVIDVGin~ 230 (287)
T PRK14173 215 E---MVRPGAVVVDVGINR 230 (287)
T ss_pred H---HcCCCCEEEEccCcc
Confidence 4 458999999999863
No 111
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.5e-06 Score=77.01 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=68.3
Q ss_pred hccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.||+++|+|. |.+|+.+|..|...|+.|+++.... .++.+.++.||+|+.++|.++.++.
T Consensus 151 ~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVI~avg~~~~v~~ 217 (284)
T PRK14179 151 EYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-------------RNLAEVARKADILVVAIGRGHFVTK 217 (284)
T ss_pred HhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEecCccccCCH
Confidence 3455689999999999 7999999999999999999983211 1466677899999999999999975
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ .+++|++|+++|+..
T Consensus 218 ~---~ik~GavVIDvgin~ 233 (284)
T PRK14179 218 E---FVKEGAVVIDVGMNR 233 (284)
T ss_pred H---HccCCcEEEEeccee
Confidence 3 379999999999763
No 112
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.5e-06 Score=77.48 Aligned_cols=80 Identities=23% Similarity=0.200 Sum_probs=66.9
Q ss_pred ccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEe-CCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 58 TDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTE-IDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 58 ~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d-~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+..+.||+|+|+| .|.+|+.+|..|...|+.|++++ +++ ++.+.++.||+|+.|+|.++.+..
T Consensus 152 ~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------~l~e~~~~ADIVIsavg~~~~v~~ 217 (296)
T PRK14188 152 VHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------DLPAVCRRADILVAAVGRPEMVKG 217 (296)
T ss_pred hCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------CHHHHHhcCCEEEEecCChhhcch
Confidence 34568999999999 77999999999999999999995 433 245566789999999999998875
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
. .+++|.+++++|+..
T Consensus 218 ~---~lk~GavVIDvGin~ 233 (296)
T PRK14188 218 D---WIKPGATVIDVGINR 233 (296)
T ss_pred h---eecCCCEEEEcCCcc
Confidence 3 379999999999853
No 113
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.6e-06 Score=77.07 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=68.7
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 154 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T-------------~~l~~~~~~ADIvVsAvGkp~~i~~~ 220 (294)
T PRK14187 154 ITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT-------------RDLADYCSKADILVAAVGIPNFVKYS 220 (294)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 4557899999999999 799999999999999999996532 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++++|++|+++|+..
T Consensus 221 ---~ik~gaiVIDVGin~ 235 (294)
T PRK14187 221 ---WIKKGAIVIDVGINS 235 (294)
T ss_pred ---HcCCCCEEEEecccc
Confidence 458999999999853
No 114
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=98.41 E-value=1.3e-06 Score=78.45 Aligned_cols=101 Identities=12% Similarity=0.132 Sum_probs=76.7
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCc-ccC------HHhhh---
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIP-VLT------REDVV--- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~-~~~------~~~~~--- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+...+.. .|++ +++ ..+.+
T Consensus 139 A~~~l~~~~~-~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~ 217 (338)
T cd08295 139 AYAGFYEVCK-PKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRY 217 (338)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHh
Confidence 3556543322 468999999998 899999999999999999998888888777766 7764 222 11211
Q ss_pred --cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 --SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 --~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++++|.. .+. +.++.++++|+++.+|..
T Consensus 218 ~~~gvd~v~d~~g~~-~~~-~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 218 FPNGIDIYFDNVGGK-MLD-AVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCCCcEEEEECCCHH-HHH-HHHHHhccCcEEEEeccc
Confidence 3689999999874 454 579999999999999864
No 115
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.41 E-value=1.7e-06 Score=76.52 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=67.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T-------------~dl~~~~k~ADIvIsAvGkp~~i~~~ 218 (282)
T PRK14180 152 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFITAD 218 (282)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHhhhcCEEEEccCCcCcCCHH
Confidence 3556899999999999 799999999999999999996432 13455678999999999999999854
Q ss_pred HHccCCCCeEEEEecCC
Q 037949 137 HMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~ 153 (243)
++++|++|+++|+.
T Consensus 219 ---~vk~gavVIDvGin 232 (282)
T PRK14180 219 ---MVKEGAVVIDVGIN 232 (282)
T ss_pred ---HcCCCcEEEEeccc
Confidence 46899999999975
No 116
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=98.40 E-value=1.8e-06 Score=77.84 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=65.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC-CchhHHHHhhcCCcccCHHhhhcCCcEEEEccCCh---hcccHHH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI-DLICALQALTEGIPVLTREDVVSEAGLFVTTTENA---DIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~-~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~---~~i~~~~ 137 (243)
++|+++.|||+|.+|.++|+.++..|.+|++.+. ++.+...+...|+.+.+..++++.+|+|+.++... ..+..+.
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp~~~~~~v~~ei 80 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPDEVQHEVYEAEI 80 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCcHhHHHHHHHHH
Confidence 4689999999999999999999999998877544 44445555567887667777788999999997643 1222334
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
...++++. ++.+.++
T Consensus 81 ~~~l~~g~-iVs~aaG 95 (314)
T TIGR00465 81 QPLLKEGK-TLGFSHG 95 (314)
T ss_pred HhhCCCCc-EEEEeCC
Confidence 45667665 5554444
No 117
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=98.40 E-value=3.3e-06 Score=77.60 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=87.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH-------------------------
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------------------------- 113 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------------------------- 113 (243)
..+|++|+|.|+ |+||+.+++.++.+|++|++++.++++...+...|++ +++.
T Consensus 191 ~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (393)
T cd08246 191 VKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEAR 270 (393)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccc
Confidence 357899999997 9999999999999999998899988888778777753 2211
Q ss_pred --Hhh----h--c-CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeE
Q 037949 114 --EDV----V--S-EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWV 181 (243)
Q Consensus 114 --~~~----~--~-~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~ 181 (243)
.+. . . ++|++++|+|. ..+. +.+..++++|+++.+|... ..++...+.. +...+.. ...+.
T Consensus 271 ~~~~~v~~l~~~~~g~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~----~~~~i~g-~~~~~ 343 (393)
T cd08246 271 RFGKAIWDILGGREDPDIVFEHPGR-ATFP-TSVFVCDRGGMVVICAGTTGYNHTYDNRYLWM----RQKRIQG-SHFAN 343 (393)
T ss_pred hHHHHHHHHhCCCCCCeEEEECCch-HhHH-HHHHHhccCCEEEEEcccCCCCCCCcHHHHhh----heeEEEe-cccCc
Confidence 111 1 1 68999999987 4454 4789999999999988542 2244443332 2222321 11112
Q ss_pred ccCchhhHHhhhcCCe
Q 037949 182 FPQTRRGIIILAERLL 197 (243)
Q Consensus 182 ~~~~~~ai~ll~~G~i 197 (243)
+.+..+++.++++|.+
T Consensus 344 ~~~~~~~~~~~~~~~l 359 (393)
T cd08246 344 DREAAEANRLVMKGRI 359 (393)
T ss_pred HHHHHHHHHHHHcCCc
Confidence 2232336788888876
No 118
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=98.40 E-value=1.8e-06 Score=76.89 Aligned_cols=82 Identities=27% Similarity=0.266 Sum_probs=69.1
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... -++.+.++.||+++.|+|.++.+..
T Consensus 160 ~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T-------------~nl~~~~~~ADIvv~AvGk~~~i~~ 226 (299)
T PLN02516 160 RSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT-------------PDPESIVREADIVIAAAGQAMMIKG 226 (299)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccCH
Confidence 34557899999999999 799999999999999999995432 2456677899999999999999975
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 227 ~---~vk~gavVIDvGin~ 242 (299)
T PLN02516 227 D---WIKPGAAVIDVGTNA 242 (299)
T ss_pred H---HcCCCCEEEEeeccc
Confidence 4 468999999999863
No 119
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=98.39 E-value=2.4e-06 Score=78.29 Aligned_cols=93 Identities=17% Similarity=0.233 Sum_probs=72.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.++..+...|++ +++. .+.+ .+.|++++|
T Consensus 188 ~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~ 267 (373)
T cd08299 188 VTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEV 267 (373)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEEC
Confidence 4579999999999999999999999999 899999999998888777863 2321 1111 258999999
Q ss_pred cCChhcccHHHHccC-CCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMKQM-KNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l-~~g~~vvnvg~~~ 154 (243)
+|.+..+.. .+..+ +++|+++.+|...
T Consensus 268 ~g~~~~~~~-~~~~~~~~~G~~v~~g~~~ 295 (373)
T cd08299 268 IGRLDTMKA-ALASCHEGYGVSVIVGVPP 295 (373)
T ss_pred CCCcHHHHH-HHHhhccCCCEEEEEccCC
Confidence 997666653 45544 5789999999753
No 120
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=98.39 E-value=2.5e-06 Score=75.67 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=70.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
.+|.|+|+|.+|..+|..+...|.+|+++|+++.+.......|... .+.++.++++|+|+.|+.....+.. ..
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~ 82 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGI 82 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchH
Confidence 4799999999999999999999999999999998876666666643 4567778899999999764332211 13
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++++...
T Consensus 83 ~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 83 IEGAKPGTVVIDMSSIA 99 (296)
T ss_pred hhcCCCCcEEEECCCCC
Confidence 45678899999988764
No 121
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.39 E-value=1.9e-06 Score=76.11 Aligned_cols=82 Identities=22% Similarity=0.226 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..++.+.||+|+|+|-+ -+|+.++..|...||.|++++... .++.+.++.||+++.++|.++.++.
T Consensus 150 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T-------------~nl~~~~~~ADIvI~AvGk~~~i~~ 216 (282)
T PRK14182 150 EARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRT-------------ADLAGEVGRADILVAAIGKAELVKG 216 (282)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccCH
Confidence 34557899999999999 799999999999999999985432 2455667899999999999999986
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ++|+|++|+++|+..
T Consensus 217 ~---~ik~gaiVIDvGin~ 232 (282)
T PRK14182 217 A---WVKEGAVVIDVGMNR 232 (282)
T ss_pred H---HcCCCCEEEEeecee
Confidence 4 468999999999753
No 122
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.39 E-value=2e-06 Score=76.63 Aligned_cols=81 Identities=28% Similarity=0.337 Sum_probs=68.1
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||+++.|+|.++.++.+
T Consensus 152 ~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~~~ 218 (297)
T PRK14186 152 QQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT-------------QDLASITREADILVAAAGRPNLIGAE 218 (297)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 3556899999999999 799999999999999999985432 24556678999999999999999754
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 219 ---~ik~gavVIDvGin~ 233 (297)
T PRK14186 219 ---MVKPGAVVVDVGIHR 233 (297)
T ss_pred ---HcCCCCEEEEecccc
Confidence 468999999999864
No 123
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=98.39 E-value=1.8e-06 Score=78.16 Aligned_cols=102 Identities=21% Similarity=0.191 Sum_probs=77.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----H---hhh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----E---DVV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~---~~~-- 117 (243)
.++++.+.. ...+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++. . +.+
T Consensus 165 a~~al~~~~-~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~ 243 (361)
T cd08231 165 VLAALDRAG-PVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRD 243 (361)
T ss_pred HHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHH
Confidence 345554432 22389999999999999999999999999 999999988887777777764 2221 1 111
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+.|++++|+|....+. ..++.++++|+++.+|..
T Consensus 244 ~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 282 (361)
T cd08231 244 ITGGRGADVVIEASGHPAAVP-EGLELLRRGGTYVLVGSV 282 (361)
T ss_pred HhCCCCCcEEEECCCChHHHH-HHHHHhccCCEEEEEcCC
Confidence 35899999998766565 578999999999999865
No 124
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=98.37 E-value=1.9e-06 Score=77.94 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=68.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||++|.|+|.++.++.+
T Consensus 208 ~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T-------------~nl~~~~~~ADIvIsAvGkp~~v~~d 274 (345)
T PLN02897 208 SGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT-------------KDPEQITRKADIVIAAAGIPNLVRGS 274 (345)
T ss_pred hCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHHhhCCEEEEccCCcCccCHH
Confidence 3556899999999999 799999999999999999985432 23556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 275 ---~vk~GavVIDVGin~ 289 (345)
T PLN02897 275 ---WLKPGAVVIDVGTTP 289 (345)
T ss_pred ---HcCCCCEEEEccccc
Confidence 468999999999863
No 125
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=98.37 E-value=2.9e-06 Score=75.64 Aligned_cols=90 Identities=14% Similarity=0.212 Sum_probs=71.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------HH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------RH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------~~ 137 (243)
+++.|+|.|.+|..+|..+...|.+|+++|+++.+.......|.. +.++.++++++|+|+.|+.....+.. ..
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i 81 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGV 81 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccH
Confidence 379999999999999999999999999999999987666666764 34567788899999999876542221 12
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++.+...
T Consensus 82 ~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 82 CEGLSRDALVIDMSTIH 98 (296)
T ss_pred hhcCCCCCEEEECCCCC
Confidence 44578899999988764
No 126
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=98.37 E-value=3.4e-06 Score=75.66 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=69.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
|++|+|.|+ |++|..+++.++.+|+ +|++++.++++.+.+.. .|++ +++ +.+.+ .++|++++++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 399999998 8999999999999999 89999988888766655 7764 221 22222 368999999988
Q ss_pred hhcccHHHHccCCCCeEEEEecC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.. + .+.++.++++|+++.+|.
T Consensus 235 ~~-~-~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EI-S-DTVISQMNENSHIILCGQ 255 (345)
T ss_pred HH-H-HHHHHHhccCCEEEEEee
Confidence 65 4 357999999999999884
No 127
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=98.37 E-value=4.9e-06 Score=71.11 Aligned_cols=102 Identities=22% Similarity=0.215 Sum_probs=76.0
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh-----hcC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV-----VSE 119 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~-----~~~ 119 (243)
++++..... ..+|++++|.|+|.+|+.+++.++..|++|++++.++.+...+...|.+ +++ ..+. -..
T Consensus 123 ~~~l~~~~~-~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 201 (271)
T cd05188 123 YHALRRAGV-LKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGG 201 (271)
T ss_pred HHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCC
Confidence 344443322 2579999999999999999999999999999999998877666666643 222 1111 146
Q ss_pred CcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 120 AGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.|++++++|....+. ..++.++++|+++++|...
T Consensus 202 ~d~vi~~~~~~~~~~-~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 202 ADVVIDAVGGPETLA-QALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCEEEECCCCHHHHH-HHHHhcccCCEEEEEccCC
Confidence 899999988744454 4688899999999998764
No 128
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.36 E-value=2.1e-06 Score=75.77 Aligned_cols=81 Identities=31% Similarity=0.324 Sum_probs=69.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccH
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
..+..+.|++|+|+|.+ .+|+.++..+...|++|++++.+.. ++.+.++.||++|.++|.+..++.
T Consensus 145 ~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~-------------~L~~~~~~ADIvI~Avgk~~lv~~ 211 (279)
T PRK14178 145 EYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE-------------NLKAELRQADILVSAAGKAGFITP 211 (279)
T ss_pred HcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh-------------HHHHHHhhCCEEEECCCcccccCH
Confidence 34557899999999999 8999999999999999999976542 345667899999999998899986
Q ss_pred HHHccCCCCeEEEEecCC
Q 037949 136 RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~ 153 (243)
+. +|+|++|+++|+.
T Consensus 212 ~~---vk~GavVIDVgi~ 226 (279)
T PRK14178 212 DM---VKPGATVIDVGIN 226 (279)
T ss_pred HH---cCCCcEEEEeecc
Confidence 54 5999999999975
No 129
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=98.36 E-value=2e-06 Score=78.10 Aligned_cols=81 Identities=23% Similarity=0.281 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.++.+.||+|+|+|-+ -+|+.++..|...||.|+++.... .++.+.++.||++|.|+|.++.++.+
T Consensus 225 y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T-------------~nl~~~~r~ADIVIsAvGkp~~i~~d 291 (364)
T PLN02616 225 YNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITREADIIISAVGQPNMVRGS 291 (364)
T ss_pred hCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCcCCHH
Confidence 4556899999999999 799999999999999999985432 24556678999999999999999864
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
++|+|++|+++|+..
T Consensus 292 ---~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 292 ---WIKPGAVVIDVGINP 306 (364)
T ss_pred ---HcCCCCEEEeccccc
Confidence 468999999999863
No 130
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.36 E-value=2.5e-06 Score=75.62 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=68.0
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|... +|.|++++... .++.+.++.||+++.|+|.++
T Consensus 146 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T-------------~~l~~~~~~ADIvV~AvG~p~ 212 (287)
T PRK14181 146 YYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS-------------ENLTEILKTADIIIAAIGVPL 212 (287)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcC
Confidence 34557899999999999 7999999999988 78999885422 245566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+ ++|+|++|+++|+..
T Consensus 213 ~i~~~---~ik~GavVIDvGin~ 232 (287)
T PRK14181 213 FIKEE---MIAEKAVIVDVGTSR 232 (287)
T ss_pred ccCHH---HcCCCCEEEEecccc
Confidence 99864 468999999999863
No 131
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.36 E-value=2.5e-06 Score=75.57 Aligned_cols=81 Identities=23% Similarity=0.260 Sum_probs=68.0
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHh--CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhccc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKA--VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIM 134 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~--~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~ 134 (243)
.++.+.||+|+|+|.+ -+|+.++..|.. .+|.|++++... .++.+.++.||+++.|+|.++.++
T Consensus 152 ~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T-------------~~l~~~~k~ADIvV~AvGkp~~i~ 218 (284)
T PRK14193 152 YDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT-------------RDLAAHTRRADIIVAAAGVAHLVT 218 (284)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC-------------CCHHHHHHhCCEEEEecCCcCccC
Confidence 4556899999999999 799999999988 799999996532 245667789999999999999998
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+ ++|+|++|+++|+..
T Consensus 219 ~~---~ik~GavVIDvGin~ 235 (284)
T PRK14193 219 AD---MVKPGAAVLDVGVSR 235 (284)
T ss_pred HH---HcCCCCEEEEccccc
Confidence 64 468999999999863
No 132
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.34 E-value=1.5e-06 Score=77.17 Aligned_cols=91 Identities=22% Similarity=0.214 Sum_probs=72.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc----c---CHHhhhcCCcEEEEcc---C--C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV----L---TREDVVSEAGLFVTTT---E--N 129 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~----~---~~~~~~~~aDvvi~a~---G--~ 129 (243)
..-+|+|+|+|-+|...|+.+..+|++|++.|+|..|+.+--. .+.++ . ++++.+..+|++|.+. | .
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 4467999999999999999999999999999999988744332 23332 1 2467788999998773 4 3
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|.++.++++..||||++++.+++-
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEEc
Confidence 567888889999999999998764
No 133
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.32 E-value=3.2e-06 Score=74.95 Aligned_cols=82 Identities=23% Similarity=0.235 Sum_probs=68.6
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHh----CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKA----VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~----~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|.. .||+|++++.... ++.+.++.||+++.|+|.+.
T Consensus 150 ~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~-------------~l~~~~~~ADIVI~AvG~p~ 216 (286)
T PRK14184 150 RYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTP-------------DLAEECREADFLFVAIGRPR 216 (286)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCch-------------hHHHHHHhCCEEEEecCCCC
Confidence 34557899999999999 799999999998 8999999875442 35566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+. +++|++|+++|+..
T Consensus 217 li~~~~---vk~GavVIDVGi~~ 236 (286)
T PRK14184 217 FVTADM---VKPGAVVVDVGINR 236 (286)
T ss_pred cCCHHH---cCCCCEEEEeeeec
Confidence 998654 49999999999753
No 134
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=98.32 E-value=8.4e-06 Score=72.88 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=76.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccC----HH----hhh--c
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLT----RE----DVV--S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~----~~----~~~--~ 118 (243)
|+++.+......+|++|+|.|+|.+|+.+++.++..| ++|++++.++.+.......|++ +++ .. +.. .
T Consensus 155 ~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 234 (340)
T cd05284 155 YHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGR 234 (340)
T ss_pred HHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCC
Confidence 4555433112357999999999999999999999999 7999998888877666666753 222 11 112 2
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.|++++++|....+. +.++.++++|+++..|..+
T Consensus 235 ~~dvvld~~g~~~~~~-~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 235 GADAVIDFVGSDETLA-LAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred CCCEEEEcCCCHHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 5899999998755554 5789999999999998765
No 135
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=98.32 E-value=3.1e-06 Score=75.17 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=75.8
Q ss_pred hhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV----- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~----- 117 (243)
.|+++.+... ..+|++|+|.|+ |++|..+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 131 a~~al~~~~~-~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~ 209 (329)
T cd08294 131 AYFGLLEICK-PKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP 209 (329)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC
Confidence 3556533222 357999999994 8999999999999999999999888888777777864 222 11111
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+.|++++++|.. .+. ..++.++++|+++.+|.
T Consensus 210 ~gvd~vld~~g~~-~~~-~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 210 DGIDCYFDNVGGE-FSS-TVLSHMNDFGRVAVCGS 242 (329)
T ss_pred CCcEEEEECCCHH-HHH-HHHHhhccCCEEEEEcc
Confidence 3589999999874 443 57899999999999885
No 136
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.31 E-value=3.6e-06 Score=74.81 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=67.4
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.+..+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+++.|+|.++.
T Consensus 151 ~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~nl~~~~~~ADIvIsAvGkp~~ 217 (293)
T PRK14185 151 YHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS-------------KNLKKECLEADIIIAALGQPEF 217 (293)
T ss_pred hCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC-------------CCHHHHHhhCCEEEEccCCcCc
Confidence 3556899999999999 7999999999987 69999985432 2455667899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.+ ++++|++|+++|+..
T Consensus 218 i~~~---~vk~gavVIDvGin~ 236 (293)
T PRK14185 218 VKAD---MVKEGAVVIDVGTTR 236 (293)
T ss_pred cCHH---HcCCCCEEEEecCcc
Confidence 9754 568999999999853
No 137
>PRK10083 putative oxidoreductase; Provisional
Probab=98.31 E-value=3.9e-06 Score=75.09 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=73.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHh-CCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHhhhc----CCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKA-VGAR-VMGTEIDLICALQALTEGIP-VLT-----REDVVS----EAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~-~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~~----~aDvvi~a~G 128 (243)
..+|++|+|.|.|.+|+.+++.++. +|++ |++++.++.+...+...|++ +++ ..+.+. ++|++++++|
T Consensus 158 ~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g 237 (339)
T PRK10083 158 PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAAC 237 (339)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCC
Confidence 3579999999999999999999996 6995 77789999888777778875 332 222221 3579999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+..+. +.++.++++|+++++|..+
T Consensus 238 ~~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (339)
T PRK10083 238 HPSILE-EAVTLASPAARIVLMGFSS 262 (339)
T ss_pred CHHHHH-HHHHHhhcCCEEEEEccCC
Confidence 766665 5789999999999998754
No 138
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.30 E-value=3.6e-06 Score=74.95 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=67.8
Q ss_pred hccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh
Q 037949 57 ATDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 57 ~~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~ 131 (243)
..++.+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+|+.|+|.++
T Consensus 154 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T-------------~~l~~~~~~ADIvVsAvGkp~ 220 (297)
T PRK14168 154 RSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS-------------KNLARHCQRADILIVAAGVPN 220 (297)
T ss_pred HhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC-------------cCHHHHHhhCCEEEEecCCcC
Confidence 34557899999999999 7999999999988 78999985432 245566789999999999999
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.++.+ ++|+|++|+++|+..
T Consensus 221 ~i~~~---~ik~gavVIDvGin~ 240 (297)
T PRK14168 221 LVKPE---WIKPGATVIDVGVNR 240 (297)
T ss_pred ccCHH---HcCCCCEEEecCCCc
Confidence 99864 468999999999753
No 139
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.30 E-value=4e-06 Score=74.69 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=67.3
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhC----CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAV----GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~----Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.++.+.||+|+|+|-+ -+|+.++..|... +|.|+++.... .++.+.++.||+++.|+|.++.
T Consensus 151 ~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~~l~~~~~~ADIvIsAvGkp~~ 217 (297)
T PRK14167 151 AGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT-------------DDLAAKTRRADIVVAAAGVPEL 217 (297)
T ss_pred hCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCc
Confidence 3556899999999999 7999999999877 89999985432 2355667899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++.+ ++|+|++|+++|+..
T Consensus 218 i~~~---~ik~gaiVIDvGin~ 236 (297)
T PRK14167 218 IDGS---MLSEGATVIDVGINR 236 (297)
T ss_pred cCHH---HcCCCCEEEEccccc
Confidence 9864 468999999999753
No 140
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=98.30 E-value=3e-06 Score=75.03 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=72.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcCCcccCHHhhhcCCcEEEEccCC---hhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEGIPVLTREDVVSEAGLFVTTTEN---ADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~---~~~i~~~ 136 (243)
.++||+|+|||||.-|.+-|+.+|..|.+|++-=+.... ...|..+|+++.+.+++++.||+|+..+.. +.+...+
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 478999999999999999999999999999886554333 678889999999999999999999887643 3344434
Q ss_pred HHccCCCCeEEEEe
Q 037949 137 HMKQMKNAAIVCNI 150 (243)
Q Consensus 137 ~l~~l~~g~~vvnv 150 (243)
.-..|+.|..+...
T Consensus 95 I~p~Lk~G~aL~Fa 108 (338)
T COG0059 95 IAPNLKEGAALGFA 108 (338)
T ss_pred hhhhhcCCceEEec
Confidence 45677888766654
No 141
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=98.29 E-value=6.7e-06 Score=74.10 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=91.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hhc-
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED----VVS- 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~~- 118 (243)
|+++.+... ..+|++|+|.|.|.+|..+++.++..|+ +|++++.++.+...+...|.+ +++ ..+ ...
T Consensus 164 ~~~~~~~~~-~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
T cd08240 164 YSAVKKLMP-LVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGG 242 (350)
T ss_pred HHHHHhccc-CCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCC
Confidence 455544322 2378999999999999999999999999 788899888887777666753 222 111 112
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCC--CCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhhcCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDN--EIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILAERL 196 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~--~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~~G~ 196 (243)
+.|++++++|....+. ..++.++++|+++.+|.... .++...+.. +...+.... .+...+..+++.++++|.
T Consensus 243 ~~d~vid~~g~~~~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~ll~~~~ 316 (350)
T cd08240 243 GVDAVIDFVNNSATAS-LAFDILAKGGKLVLVGLFGGEATLPLPLLPL----RALTIQGSY-VGSLEELRELVALAKAGK 316 (350)
T ss_pred CCcEEEECCCCHHHHH-HHHHHhhcCCeEEEECCCCCCCcccHHHHhh----cCcEEEEcc-cCCHHHHHHHHHHHHcCC
Confidence 5899999998766665 57999999999999887542 233333222 112222211 111122233678888887
Q ss_pred e
Q 037949 197 L 197 (243)
Q Consensus 197 i 197 (243)
+
T Consensus 317 i 317 (350)
T cd08240 317 L 317 (350)
T ss_pred C
Confidence 5
No 142
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=98.29 E-value=1.5e-05 Score=70.76 Aligned_cols=139 Identities=15% Similarity=0.196 Sum_probs=89.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcCCcccC-----HHhh----h-
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEGIPVLT-----REDV----V- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G~~~~~-----~~~~----~- 117 (243)
.|+++..... ..+|++|+|.|.|.+|..+++.+++.|++|+++.. ++.+...+...|++.++ ..+. .
T Consensus 152 a~~~l~~~~~-~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 230 (306)
T cd08258 152 AVHAVAERSG-IRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITD 230 (306)
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCcccCCCcCCHHHHHHHHcC
Confidence 3455433222 35789999999999999999999999999877633 44455445556653111 1111 1
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC---CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA 193 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~ 193 (243)
.+.|+++++.|....+. ..+..++++|+++.+|... .+++...+.. +.+++.. +..+...+.++++++++
T Consensus 231 ~~~vd~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~i~g-~~~~~~~~~~~~~~~~~ 304 (306)
T cd08258 231 GDGADVVIECSGAVPALE-QALELLRKGGRIVQVGIFGPLAASIDVERIIQ----KELSVIG-SRSSTPASWETALRLLA 304 (306)
T ss_pred CCCCCEEEECCCChHHHH-HHHHHhhcCCEEEEEcccCCCCcccCHHHHhh----cCcEEEE-EecCchHhHHHHHHHHh
Confidence 35899999987765554 4688899999999998753 3445444433 3344543 22334455444677777
Q ss_pred cC
Q 037949 194 ER 195 (243)
Q Consensus 194 ~G 195 (243)
+|
T Consensus 305 ~~ 306 (306)
T cd08258 305 SG 306 (306)
T ss_pred cC
Confidence 65
No 143
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.28 E-value=1.4e-05 Score=68.76 Aligned_cols=91 Identities=20% Similarity=0.188 Sum_probs=69.0
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC----chhH--------HHHhhcCC-cc-cCHHhhhcCCcE
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID----LICA--------LQALTEGI-PV-LTREDVVSEAGL 122 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~----~~r~--------~~a~~~G~-~~-~~~~~~~~~aDv 122 (243)
..+.+++++|+|+|..|++++..+...|+ +|+++|++ ..|. ..+...+. .. .++.+.++++|+
T Consensus 21 ~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~dv 100 (226)
T cd05311 21 KKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGADV 100 (226)
T ss_pred CCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcCCE
Confidence 35789999999999999999999999998 49999998 3332 12222221 11 245567788999
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEec
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg 151 (243)
+|.+++ ..+++.+.++.|.++.++....
T Consensus 101 lIgaT~-~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 101 FIGVSR-PGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred EEeCCC-CCCCCHHHHHhhCCCCEEEEeC
Confidence 999998 7778777888888887777655
No 144
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.28 E-value=4.4e-06 Score=73.21 Aligned_cols=37 Identities=27% Similarity=0.240 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
++||+++|+|++ +||+++|+.|...|++|+++++++.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~ 44 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA 44 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH
Confidence 679999999997 7999999999999999999987653
No 145
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.28 E-value=1.5e-06 Score=72.58 Aligned_cols=140 Identities=14% Similarity=0.160 Sum_probs=80.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCC--cccCHHhhhcCCcEEEEccCChhcccHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGI--PVLTREDVVSEAGLFVTTTENADIIMVRH 137 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~--~~~~~~~~~~~aDvvi~a~G~~~~i~~~~ 137 (243)
+..+.++|+|+| +||+++++.+...|++|.+.|++....+... .++. +.. .-.+||- ++.-...++. +.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~-----aF~~DVS-~a~~v~~~l~-e~ 84 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHS-----AFSCDVS-KAHDVQNTLE-EM 84 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccc-----eeeeccC-cHHHHHHHHH-HH
Confidence 457899999999 8999999999999999999999877543322 2221 111 0123322 1111122232 34
Q ss_pred HccC-CCCeEEEEecCCCCC----CChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh--h--c-CCeecccCCCCCc
Q 037949 138 MKQM-KNAAIVCNIGHFDNE----IDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL--A--E-RLLMNLGCPTGHP 207 (243)
Q Consensus 138 l~~l-~~g~~vvnvg~~~~~----id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll--~--~-G~ivNl~s~~g~p 207 (243)
.+.+ ++..+|+++|+-.+. ...+.|... +..+..+.++.... +.+.+ . + ++|||++|+.|.-
T Consensus 85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~v-------i~vNL~gvfl~tqa-a~r~~~~~~~~~~sIiNvsSIVGki 156 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSV-------IAVNLTGVFLVTQA-AVRAMVMNQQQGLSIINVSSIVGKI 156 (256)
T ss_pred HHhcCCCcEEEEcCccccccceeeccHHHHHHH-------HHhhchhhHHHHHH-HHHHHHHhcCCCceEEeehhhhccc
Confidence 4444 566666677776422 333444331 22333344444433 44442 2 2 3999999998777
Q ss_pred cccccchHH
Q 037949 208 SFVMSCSFT 216 (243)
Q Consensus 208 ~~~~~~~~~ 216 (243)
+.+-.--|+
T Consensus 157 GN~GQtnYA 165 (256)
T KOG1200|consen 157 GNFGQTNYA 165 (256)
T ss_pred ccccchhhh
Confidence 666555443
No 146
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.28 E-value=5.8e-06 Score=74.68 Aligned_cols=85 Identities=22% Similarity=0.226 Sum_probs=60.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC---------c-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI---------P-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~---------~-~~~~~~~~~~aDvv 123 (243)
++|.|+|+|.||..+|..+...|.+|+++|+++..+..+.. .|. . +.++++++.+||+|
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV 87 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI 87 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence 68999999999999999999999999999999876533221 111 1 12456778899999
Q ss_pred EEccCCh----hcccHHHHccCCCCeEEEE
Q 037949 124 VTTTENA----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 124 i~a~G~~----~~i~~~~l~~l~~g~~vvn 149 (243)
++|.... ..+-.+.-+.+++++++..
T Consensus 88 iEavpE~l~vK~~lf~~l~~~~~~~aIlaS 117 (321)
T PRK07066 88 QESAPEREALKLELHERISRAAKPDAIIAS 117 (321)
T ss_pred EECCcCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9996532 2222333456688886653
No 147
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=98.28 E-value=5.1e-06 Score=74.31 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=69.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCChhc--ccHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENADI--IMVR 136 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~~~--i~~~ 136 (243)
.++|+|+|+|.||..++..++..|. +|+++|+++.+...+...|.. ..+..+.+.++|+|+.|+..... +-.+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~~ 85 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAAE 85 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 4689999999999999999999985 899999999887777666742 23456677899999999865332 1123
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
....++++.+|+++|...
T Consensus 86 l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 86 IAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHhhCCCCCEEEeCccch
Confidence 345678888888887653
No 148
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.27 E-value=1.1e-06 Score=77.61 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=80.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCcccCHHhh-hcCCcEEEEccCChhccc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIPVLTREDV-VSEAGLFVTTTENADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~~~~~~~~-~~~aDvvi~a~G~~~~i~ 134 (243)
.+.||+|+|+|+. +||..+|..+...|++++.+.+...|++... +.+. .++. .-.+|+-- ....+..++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~----~~~v~~~~~Dvs~-~~~~~~~~~ 83 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGS----LEKVLVLQLDVSD-EESVKKFVE 83 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCC----cCccEEEeCccCC-HHHHHHHHH
Confidence 3689999999998 9999999999999998887777666654331 1111 0000 01222220 001112221
Q ss_pred H--HHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhhh---cCCeecccCCCC
Q 037949 135 V--RHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIILA---ERLLMNLGCPTG 205 (243)
Q Consensus 135 ~--~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll~---~G~ivNl~s~~g 205 (243)
. ..|+ +-+-.|+|+|... ...+..++.. .++.|+.+..+..+. ++..|. +|.||+++|+.|
T Consensus 84 ~~~~~fg--~vDvLVNNAG~~~~~~~~~~~~~~~~~-------~mdtN~~G~V~~Tk~-alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 84 WAIRHFG--RVDVLVNNAGISLVGFLEDTDIEDVRN-------VMDTNVFGTVYLTKA-ALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred HHHHhcC--CCCEEEecCccccccccccCcHHHHHH-------HhhhhchhhHHHHHH-HHHHhhhcCCCeEEEEecccc
Confidence 1 2344 4589999999874 1223333322 133455444444444 777662 399999999887
Q ss_pred Ccccccc
Q 037949 206 HPSFVMS 212 (243)
Q Consensus 206 ~p~~~~~ 212 (243)
+-..-..
T Consensus 154 ~~~~P~~ 160 (282)
T KOG1205|consen 154 KMPLPFR 160 (282)
T ss_pred ccCCCcc
Confidence 6554443
No 149
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.27 E-value=8.4e-06 Score=73.12 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=75.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh-h---h--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED-V---V-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~-~---~-- 117 (243)
++++... . ..+|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|++ +++ ..+ . .
T Consensus 158 ~~~~~~~-~-~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~ 235 (345)
T cd08287 158 HHAAVSA-G-VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGG 235 (345)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCC
Confidence 4554332 2 45799999999999999999999999995 78888888777666667763 222 111 1 1
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++++|....++ ..++.++++++++..|...
T Consensus 236 ~~~d~il~~~g~~~~~~-~~~~~l~~~g~~v~~g~~~ 271 (345)
T cd08287 236 VGADAVLECVGTQESME-QAIAIARPGGRVGYVGVPH 271 (345)
T ss_pred CCCCEEEECCCCHHHHH-HHHHhhccCCEEEEecccC
Confidence 25899999998766665 4789999999999988654
No 150
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.26 E-value=6.3e-06 Score=72.43 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+++|+.+...|++|+++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 578999999984 899999999999999999998875
No 151
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=98.26 E-value=4.7e-06 Score=73.64 Aligned_cols=89 Identities=17% Similarity=0.240 Sum_probs=67.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-c-ccCHHhhhcCCcEEEEccCChhccc--HHHHccC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-P-VLTREDVVSEAGLFVTTTENADIIM--VRHMKQM 141 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~-~~~~~~~~~~aDvvi~a~G~~~~i~--~~~l~~l 141 (243)
+|.|+|+|.||..+|..++..|.+|+++|+++.+...+...|. . ..+..+.+.++|+|+.|+....... .+....+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l 81 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL 81 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999988777776664 2 2222345778999999976543211 2334556
Q ss_pred CCCeEEEEecCCC
Q 037949 142 KNAAIVCNIGHFD 154 (243)
Q Consensus 142 ~~g~~vvnvg~~~ 154 (243)
+++.++.++|...
T Consensus 82 ~~~~ii~d~~Svk 94 (279)
T PRK07417 82 PPEAIVTDVGSVK 94 (279)
T ss_pred CCCcEEEeCcchH
Confidence 7888888877654
No 152
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=98.25 E-value=4.7e-06 Score=73.28 Aligned_cols=81 Identities=22% Similarity=0.240 Sum_probs=68.6
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+..+.|++++|+|.+ -+|+.+++.|...++.|.+++.... ++.+.++.||+++.|+|.++.+..
T Consensus 150 ~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~-------------~l~~~~k~ADIvv~AvG~p~~i~~- 215 (283)
T COG0190 150 YGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTK-------------DLASITKNADIVVVAVGKPHFIKA- 215 (283)
T ss_pred hCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCC-------------CHHHHhhhCCEEEEecCCcccccc-
Confidence 3557899999999999 6899999999999999999965432 344567899999999999999975
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
+++++|++|+.+|+..
T Consensus 216 --d~vk~gavVIDVGinr 231 (283)
T COG0190 216 --DMVKPGAVVIDVGINR 231 (283)
T ss_pred --ccccCCCEEEecCCcc
Confidence 4579999999999863
No 153
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=98.24 E-value=9.9e-06 Score=72.74 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=72.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccCH-----Hh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLTR-----ED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+|.+|..+++.++.+| .+|++++.++.+...+...|++ +++. .+ .. .+.|++++|+
T Consensus 164 ~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~ 243 (345)
T cd08286 164 VKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAV 243 (345)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECC
Confidence 357999999999999999999999999 6899999988887666667763 2221 11 11 3599999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.+..+. ..++.++++|++++.|..+
T Consensus 244 g~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (345)
T cd08286 244 GIPATFE-LCQELVAPGGHIANVGVHG 269 (345)
T ss_pred CCHHHHH-HHHHhccCCcEEEEecccC
Confidence 8766654 4678899999999998654
No 154
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=98.23 E-value=1.4e-05 Score=73.43 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=75.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhc-CCcccC------HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTE-GIPVLT------REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~-G~~~~~------~~~~~---- 117 (243)
.|+++... . ..+|++|+|.|+|.+|..+++.++..|+ +|++++.++.+...+... +..+++ ..+.+
T Consensus 173 a~~~l~~~-~-~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~ 250 (386)
T cd08283 173 GYHAAELA-E-VKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELT 250 (386)
T ss_pred hHHHHhhc-c-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHc
Confidence 35555322 2 3579999999999999999999999998 699999999888777666 443322 11111
Q ss_pred --cCCcEEEEccCCh---------------------hcccHHHHccCCCCeEEEEecCCC
Q 037949 118 --SEAGLFVTTTENA---------------------DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 --~~aDvvi~a~G~~---------------------~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|.. ..++ +.++.++++|+++++|...
T Consensus 251 ~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALR-EAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred CCCCCCEEEECCCCcccccccccccccccccccCchHHHH-HHHHHhccCCEEEEEcCCC
Confidence 2589999998742 2454 5789999999999998653
No 155
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.22 E-value=4.2e-06 Score=74.15 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=62.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------cC-----------------Cc-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------EG-----------------IP-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------~G-----------------~~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++++++.+.. .+ .. +.+..+.+++
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 57999999999999999999999999999999987655331 11 11 1234566789
Q ss_pred CcEEEEccCChhcccH----HHHccCCCCeEE-EEecC
Q 037949 120 AGLFVTTTENADIIMV----RHMKQMKNAAIV-CNIGH 152 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~----~~l~~l~~g~~v-vnvg~ 152 (243)
+|+|++|......+.. +..+.++++.++ +|.+.
T Consensus 82 aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 82 ADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999866532222 223556788766 46554
No 156
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=98.22 E-value=8.3e-06 Score=70.81 Aligned_cols=101 Identities=23% Similarity=0.281 Sum_probs=76.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcC-Cc-ccCHH-hh--hcCCcEEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEG-IP-VLTRE-DV--VSEAGLFV 124 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G-~~-~~~~~-~~--~~~aDvvi 124 (243)
++++... . ..+|++++|.|+|.+|+.+++.++.+|++ |++++.++++...+...| .+ +.... +. -.+.|+++
T Consensus 87 ~~~~~~~-~-~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl 164 (277)
T cd08255 87 LNGVRDA-E-PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVI 164 (277)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEE
Confidence 4454332 2 35799999999999999999999999998 999999988887777777 32 22221 11 13689999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|....+. ..++.++++++++++|..+
T Consensus 165 ~~~~~~~~~~-~~~~~l~~~g~~~~~g~~~ 193 (277)
T cd08255 165 EASGSPSALE-TALRLLRDRGRVVLVGWYG 193 (277)
T ss_pred EccCChHHHH-HHHHHhcCCcEEEEEeccC
Confidence 9988766554 5789999999999988754
No 157
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.22 E-value=8.1e-06 Score=72.77 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=66.8
Q ss_pred ccccccCcEEEEEcCC-hHHHHHHHHHHh----CCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc
Q 037949 58 TDITIAGKIAVDCGHG-DVGRGCAAALKA----VGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 58 ~~~~l~g~~vlViG~G-~IG~~~A~~l~~----~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
.++.+.||+|+|+|-+ -+|+.++..|.. .|++|+++..+.. ++.+.++.||++|.++|.++.
T Consensus 153 y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~-------------~l~~~~~~ADIvI~Avg~~~l 219 (295)
T PRK14174 153 YNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATK-------------DIPSYTRQADILIAAIGKARF 219 (295)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCch-------------hHHHHHHhCCEEEEecCccCc
Confidence 3556899999999999 799999999987 6899999876543 245567899999999999999
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++.+.+ |+|++++++|+.
T Consensus 220 i~~~~v---k~GavVIDVgi~ 237 (295)
T PRK14174 220 ITADMV---KPGAVVIDVGIN 237 (295)
T ss_pred cCHHHc---CCCCEEEEeecc
Confidence 986544 999999999975
No 158
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=98.22 E-value=1.5e-05 Score=58.02 Aligned_cols=65 Identities=26% Similarity=0.446 Sum_probs=55.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
.+.+++++|+|+|.+|+.++..+...| .+|.++|+ |+++.|++.+..+..+.+.
T Consensus 20 ~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------------di~i~~~~~~~~~~~~~~~ 74 (86)
T cd05191 20 SLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------------DILVTATPAGVPVLEEATA 74 (86)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------------CEEEEcCCCCCCchHHHHH
Confidence 478999999999999999999999984 58888877 9999999988887655577
Q ss_pred cCCCCeEEEEe
Q 037949 140 QMKNAAIVCNI 150 (243)
Q Consensus 140 ~l~~g~~vvnv 150 (243)
.++++.++++.
T Consensus 75 ~~~~~~~v~~~ 85 (86)
T cd05191 75 KINEGAVVIDL 85 (86)
T ss_pred hcCCCCEEEec
Confidence 88888887764
No 159
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=98.21 E-value=1.6e-05 Score=71.46 Aligned_cols=93 Identities=19% Similarity=0.174 Sum_probs=72.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------EDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~~-----~~aDvvi~a~G 128 (243)
..+|++++|.|.|.+|+.+++.++.+|++|++++.++.+...+...|++ +++. .+.+ ..+|++++|+|
T Consensus 163 ~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g 242 (345)
T cd08260 163 VKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALG 242 (345)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCC
Confidence 3578999999999999999999999999999998888877666666763 3221 1111 16899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.++..|..+
T Consensus 243 ~~~~~~-~~~~~l~~~g~~i~~g~~~ 267 (345)
T cd08260 243 IPETCR-NSVASLRKRGRHVQVGLTL 267 (345)
T ss_pred CHHHHH-HHHHHhhcCCEEEEeCCcC
Confidence 655554 4788999999999998753
No 160
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.21 E-value=1.5e-06 Score=76.90 Aligned_cols=157 Identities=15% Similarity=0.168 Sum_probs=90.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHh----hcCCcccCHHhhhcCCcEEEEccCChh----
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQAL----TEGIPVLTREDVVSEAGLFVTTTENAD---- 131 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~----~~G~~~~~~~~~~~~aDvvi~a~G~~~---- 131 (243)
+.+|+.|+|+|+| ++|+.+|.-+..+|++++++|+++.-..+-. +.| +.-..+.+++-..+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----------~~~~y~cdis~~eei~~~ 104 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----------EAKAYTCDISDREEIYRL 104 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----------ceeEEEecCCCHHHHHHH
Confidence 5799999999999 9999999999999999999999987543211 112 01123333332221
Q ss_pred --cccHHHHccCCCCeEEEEecCCC----CCCChhHHHHhhcCeEEEeecCeeeeEccCchhhHHhh---hcCCeecccC
Q 037949 132 --IIMVRHMKQMKNAAIVCNIGHFD----NEIDMLDLEAYRGIKRITIKPQTDPWVFPQTRRGIIIL---AERLLMNLGC 202 (243)
Q Consensus 132 --~i~~~~l~~l~~g~~vvnvg~~~----~~id~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ai~ll---~~G~ivNl~s 202 (243)
-+. +..+ ....+|+|+|+.. .+.+.+.+.. .+..|+....|--.. -++.| .+|-|||++|
T Consensus 105 a~~Vk-~e~G--~V~ILVNNAGI~~~~~ll~~~d~ei~k-------~~~vN~~~~f~t~ka-FLP~M~~~~~GHIV~IaS 173 (300)
T KOG1201|consen 105 AKKVK-KEVG--DVDILVNNAGIVTGKKLLDCSDEEIQK-------TFDVNTIAHFWTTKA-FLPKMLENNNGHIVTIAS 173 (300)
T ss_pred HHHHH-HhcC--CceEEEeccccccCCCccCCCHHHHHH-------HHHHhhHHHHHHHHH-HhHHHHhcCCceEEEehh
Confidence 122 2234 4467888888764 2244444433 123444333332222 33333 4699999999
Q ss_pred CCCCccccccchH--HHHH---------HHHhcC-CCCCccccCCHHH
Q 037949 203 PTGHPSFVMSCSF--TNQA---------AALHLG-KPGDKFRKLTPEQ 238 (243)
Q Consensus 203 ~~g~p~~~~~~~~--~~~~---------~~~~l~-~~~~~~~~~~~~~ 238 (243)
..|+-+-..-..| +-.+ +|+... +-|+|.|-..|-|
T Consensus 174 ~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~ 221 (300)
T KOG1201|consen 174 VAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYF 221 (300)
T ss_pred hhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeee
Confidence 7655333332222 2222 555544 5558877666543
No 161
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=98.21 E-value=1.4e-05 Score=71.08 Aligned_cols=93 Identities=19% Similarity=0.178 Sum_probs=73.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED---VV--SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~--~~aDvvi~a~G~ 129 (243)
..++++++|.|.|.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. ...|++++|+|.
T Consensus 163 ~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~ 242 (338)
T cd08254 163 VKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGT 242 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCC
Confidence 3578999999999999999999999999999999998887766666653 211 111 11 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. +.++.++++|.++..|...
T Consensus 243 ~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (338)
T cd08254 243 QPTFE-DAQKAVKPGGRIVVVGLGR 266 (338)
T ss_pred HHHHH-HHHHHhhcCCEEEEECCCC
Confidence 66665 5789999999999998654
No 162
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.21 E-value=7.8e-06 Score=72.29 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=64.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhh-cCC----cc-cCHHhhhcCCcEEEEccCCh--h
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALT-EGI----PV-LTREDVVSEAGLFVTTTENA--D 131 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~-~G~----~~-~~~~~~~~~aDvvi~a~G~~--~ 131 (243)
.+.+++|+|+|+|.+|++++..|+..| .+|+++++++.+...... .+. .. .+..+.+.++|+||+|+... +
T Consensus 120 ~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~ 199 (278)
T PRK00258 120 DLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSG 199 (278)
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCC
Confidence 468899999999999999999999999 599999999887543332 111 11 12234567899999997432 1
Q ss_pred -c-ccHHHHccCCCCeEEEEecCCC
Q 037949 132 -I-IMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 -~-i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
. ...-..+.++++..|+.+-..+
T Consensus 200 ~~~~~~~~~~~l~~~~~v~DivY~P 224 (278)
T PRK00258 200 ELPLPPLPLSLLRPGTIVYDMIYGP 224 (278)
T ss_pred CCCCCCCCHHHcCCCCEEEEeecCC
Confidence 0 1011234567788888776543
No 163
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=98.20 E-value=1.1e-05 Score=71.99 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=69.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcC---CcEEEEccCChh----cccHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSE---AGLFVTTTENAD----IIMVRH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~---aDvvi~a~G~~~----~i~~~~ 137 (243)
++.|||.|.+|..+|..+...|.+|+++|+++.+.......|... .++++.+++ +|+|+.|+.... +++ ..
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~-~i 80 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIK-DL 80 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHH-HH
Confidence 589999999999999999999999999999998876666667653 356666654 699999987652 232 34
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
+..++++.++++++...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (299)
T PRK12490 81 YPLLSPGDIVVDGGNSR 97 (299)
T ss_pred hccCCCCCEEEECCCCC
Confidence 56678899999987654
No 164
>PRK07340 ornithine cyclodeaminase; Validated
Probab=98.20 E-value=1.4e-05 Score=71.72 Aligned_cols=99 Identities=19% Similarity=0.177 Sum_probs=73.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-c---CCc--ccCHHhhhcCCcEEEEccCChh-c
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-E---GIP--VLTREDVVSEAGLFVTTTENAD-I 132 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-~---G~~--~~~~~~~~~~aDvvi~a~G~~~-~ 132 (243)
...++++|+|+|.+|+..+..+.. ++. +|.++++++.+....+. . +.. +.+.++++.++|+|+.||.++. +
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~Pl 202 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTPV 202 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCce
Confidence 356899999999999999999975 676 79999999887543322 1 333 2356778889999999987654 4
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+.. .+++|..|+.+|... .|+|.+.+..
T Consensus 203 ~~~----~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 203 YPE----AARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred eCc----cCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 532 379999999999763 5677665543
No 165
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.19 E-value=1.6e-06 Score=75.51 Aligned_cols=40 Identities=25% Similarity=0.299 Sum_probs=36.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 46 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLK 46 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 679999999986 8999999999999999999999877653
No 166
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.19 E-value=8.1e-06 Score=72.54 Aligned_cols=88 Identities=20% Similarity=0.237 Sum_probs=60.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-------------cccCHHhhhcCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-------------PVLTREDVVSEA 120 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-------------~~~~~~~~~~~a 120 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+. ..|. .+.+..+.++++
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDA 84 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCC
Confidence 6899999999999999999999999999999988764321 1221 112223457899
Q ss_pred cEEEEccCChhc----ccHHHHccCCCCeEEE-EecC
Q 037949 121 GLFVTTTENADI----IMVRHMKQMKNAAIVC-NIGH 152 (243)
Q Consensus 121 Dvvi~a~G~~~~----i~~~~l~~l~~g~~vv-nvg~ 152 (243)
|+||+|...... +-.+..+.++++++++ |++.
T Consensus 85 D~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999753222 2122334568888876 5544
No 167
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=98.18 E-value=8.6e-06 Score=72.21 Aligned_cols=89 Identities=17% Similarity=0.132 Sum_probs=71.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH----hhh-----cCCcEEEEccCChh
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE----DVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~----~~~-----~~aDvvi~a~G~~~ 131 (243)
.|++|+|.|+ |.+|..+++.++.+|++|++++.++.+...+...|++ +.+.. +.+ .++|++++|+|..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~- 224 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK- 224 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-
Confidence 4789999999 9999999999999999999999988888777777763 22211 111 3589999999874
Q ss_pred cccHHHHccCCCCeEEEEecCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+. +.++.++++|+++.+|..
T Consensus 225 ~~~-~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 225 TLA-YLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred HHH-HHHHHhhcCCEEEEEeec
Confidence 454 579999999999999865
No 168
>PRK08618 ornithine cyclodeaminase; Validated
Probab=98.18 E-value=1.9e-05 Score=71.38 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=72.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCc---ccCHHhhhcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIP---VLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~---~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
..++++|+|+|.+|+..+..+. ..++ +|.++++++++.....+ .+.+ +.+.++++.++|+|+.||++.+.
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p 205 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP 205 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc
Confidence 4689999999999998887664 5677 79999999887643322 2443 23467778899999999987664
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+- . +.+++|..|+.+|... .|+|...+.
T Consensus 206 ~i--~-~~l~~G~hV~~iGs~~p~~~E~~~~~~~ 236 (325)
T PRK08618 206 VF--S-EKLKKGVHINAVGSFMPDMQELPSEAIA 236 (325)
T ss_pred ch--H-HhcCCCcEEEecCCCCcccccCCHHHHh
Confidence 42 3 6779999999999863 456654443
No 169
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.17 E-value=6.6e-06 Score=76.28 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=72.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhhcCCcccCHHh---hhcCCcEEEEccCChh-ccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALTEGIPVLTRED---VVSEAGLFVTTTENAD-IIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~~G~~~~~~~~---~~~~aDvvi~a~G~~~-~i~ 134 (243)
.+++++|+|+|+|-+|..+|+.|...|. +|++..++.+|.. .|.+.|..++++++ .+..+|+||.+||.++ ++.
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccC
Confidence 3789999999999999999999999996 8999999988753 35567877666544 5679999999998864 455
Q ss_pred HHHHccC---CCCeEEEEecCCC
Q 037949 135 VRHMKQM---KNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l---~~g~~vvnvg~~~ 154 (243)
.+.+... +++-+++..+.+.
T Consensus 255 ~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 255 REMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred HHHHHHHHhcccCeEEEEecCCC
Confidence 5554433 2224677877763
No 170
>PLN00203 glutamyl-tRNA reductase
Probab=98.16 E-value=9.8e-06 Score=77.62 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=69.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c-CCc--cc---CHHhhhcCCcEEEEccCCh-hc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E-GIP--VL---TREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~-G~~--~~---~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
+.+++|+|+|+|.+|..+++.|...|+ +|+++++++.+...... . +.. +. +..+.+.++|+||.||+.+ ++
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 568999999999999999999999998 79999999887644332 2 322 22 2345678999999999765 45
Q ss_pred ccHHHHccCCC-------CeEEEEecCCC
Q 037949 133 IMVRHMKQMKN-------AAIVCNIGHFD 154 (243)
Q Consensus 133 i~~~~l~~l~~-------g~~vvnvg~~~ 154 (243)
+..+.++.+.+ .-++++.+.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 77777776632 13788888763
No 171
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.16 E-value=9.8e-06 Score=69.29 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=36.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
++|++++|+|++ +||+.+++.+...|++|+++++++.++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~ 44 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKD 44 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 578999999998 89999999999999999999998876543
No 172
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=98.16 E-value=1.2e-05 Score=71.91 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=76.8
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCccc-----CHHh----hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVL-----TRED----VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~-----~~~~----~~-- 117 (243)
.|+++... . ..+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+..+ +..+ ..
T Consensus 156 a~~~~~~~-~-~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 233 (344)
T cd08284 156 GYFGAKRA-Q-VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEG 233 (344)
T ss_pred HHhhhHhc-C-CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCC
Confidence 35555432 2 4579999999999999999999999997 89888888877766666774321 1111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++++|....+. ..+..++++++++.+|..+
T Consensus 234 ~~~dvvid~~~~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 234 RGADVVLEAVGGAAALD-LAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred CCCCEEEECCCCHHHHH-HHHHhcccCCEEEEECcCC
Confidence 36899999998766664 5789999999999998764
No 173
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.16 E-value=1.3e-05 Score=71.28 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=60.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCCc--------------ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGIP--------------VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~~--------------~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+ ...|.- +.+. +.+++
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 84 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFAD 84 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCC
Confidence 589999999999999999999999999999999876552 222321 1123 34679
Q ss_pred CcEEEEccCChhcccHH---HHccC--CCCeEEEEec
Q 037949 120 AGLFVTTTENADIIMVR---HMKQM--KNAAIVCNIG 151 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~---~l~~l--~~g~~vvnvg 151 (243)
+|+|++|.....-+..+ .++.+ ++++++++..
T Consensus 85 ~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snT 121 (286)
T PRK07819 85 RQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNT 121 (286)
T ss_pred CCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 99999997543222221 34555 6788887543
No 174
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.15 E-value=7.5e-06 Score=67.93 Aligned_cols=94 Identities=19% Similarity=0.232 Sum_probs=57.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c-------------ccCHHhhhcCC
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P-------------VLTREDVVSEA 120 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~-------------~~~~~~~~~~a 120 (243)
+|.|+|+|.+|..+|..+...|.+|+++|++++.+..+.. .|. . ..+++++. ++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~a 79 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-DA 79 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-TE
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-hh
Confidence 6899999999999999999999999999999987644331 111 0 01233334 89
Q ss_pred cEEEEccCCh-----hcccHHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 121 GLFVTTTENA-----DIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 121 Dvvi~a~G~~-----~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
|+|+||..-. .++ .+.-+.+++++++..-.. .++...+..
T Consensus 80 dlViEai~E~l~~K~~~~-~~l~~~~~~~~ilasnTS---sl~i~~la~ 124 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELF-AELDEICPPDTILASNTS---SLSISELAA 124 (180)
T ss_dssp SEEEE-S-SSHHHHHHHH-HHHHCCS-TTSEEEE--S---SS-HHHHHT
T ss_pred heehhhccccHHHHHHHH-HHHHHHhCCCceEEecCC---CCCHHHHHh
Confidence 9999996431 233 222345578888875333 245555543
No 175
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=98.15 E-value=5.1e-05 Score=66.65 Aligned_cols=92 Identities=18% Similarity=0.105 Sum_probs=71.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|.|.+|..+++.++..|++ |+++..++.+...+...|++ +.+ ..+. . .+.|++++|.
T Consensus 127 ~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~ 206 (312)
T cd08269 127 IRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAV 206 (312)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 35799999999999999999999999998 99888887776666666653 221 1111 1 3589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|....+. ..++.++++|+++++|..
T Consensus 207 g~~~~~~-~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 207 GHQWPLD-LAGELVAERGRLVIFGYH 231 (312)
T ss_pred CCHHHHH-HHHHHhccCCEEEEEccC
Confidence 8766565 478999999999999865
No 176
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.14 E-value=7.5e-07 Score=78.15 Aligned_cols=42 Identities=19% Similarity=0.115 Sum_probs=38.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
..+++++|+|+- +||..+|+.|...|.+|+++.++.+++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~l 46 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEAL 46 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH
Confidence 578999999987 999999999999999999999999987543
No 177
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.14 E-value=1.4e-05 Score=69.22 Aligned_cols=38 Identities=32% Similarity=0.497 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++||+++|+|++ +||+++|+.+...|++|+++++++.
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~ 47 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK 47 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh
Confidence 4689999999986 7999999999999999999988754
No 178
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=98.14 E-value=1.7e-05 Score=72.25 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=73.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
.+|++|+|.|.|.+|+.+++.++++|+ .|++++.++.+...+...|++ +++ ..+.+ .++|++++|+|.
T Consensus 185 ~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~ 264 (365)
T cd08278 185 RPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGV 264 (365)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCC
Confidence 579999999999999999999999999 588899999887776667764 222 21211 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
...+. ..++.++++|+++.+|..
T Consensus 265 ~~~~~-~~~~~l~~~G~~v~~g~~ 287 (365)
T cd08278 265 PAVIE-QAVDALAPRGTLALVGAP 287 (365)
T ss_pred cHHHH-HHHHHhccCCEEEEeCcC
Confidence 66665 579999999999999865
No 179
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=98.13 E-value=1.4e-05 Score=72.81 Aligned_cols=92 Identities=17% Similarity=0.223 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-------Hhhh-----cCCcEEEEc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-------EDVV-----SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-------~~~~-----~~aDvvi~a 126 (243)
..+|++|+|.|.|++|+.+++.++.+|++ |++++.++.+...+...|++ +++. .+.+ .+.|+++++
T Consensus 181 ~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~ 260 (365)
T cd05279 181 VTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEV 260 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEEC
Confidence 35799999999999999999999999995 77888888887777777763 2221 1111 358999999
Q ss_pred cCChhcccHHHHccCC-CCeEEEEecCC
Q 037949 127 TENADIIMVRHMKQMK-NAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~-~g~~vvnvg~~ 153 (243)
+|....+. ..++.++ ++|+++.+|..
T Consensus 261 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 287 (365)
T cd05279 261 IGSADTLK-QALDATRLGGGTSVVVGVP 287 (365)
T ss_pred CCCHHHHH-HHHHHhccCCCEEEEEecC
Confidence 98766665 4788898 99999998864
No 180
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.13 E-value=1.6e-05 Score=70.64 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=60.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-------------cc-cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-------------PV-LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~~-~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++++++.+.. .|. .. .+. +.+.+
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 83 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLAD 83 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhcC
Confidence 68999999999999999999999999999999887654321 131 11 123 34678
Q ss_pred CcEEEEccCChhcc----cHHHHccCCCCeEEE-Eec
Q 037949 120 AGLFVTTTENADII----MVRHMKQMKNAAIVC-NIG 151 (243)
Q Consensus 120 aDvvi~a~G~~~~i----~~~~l~~l~~g~~vv-nvg 151 (243)
+|+|++|+..+..+ -.+..+.++++.+++ |++
T Consensus 84 aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts 120 (292)
T PRK07530 84 CDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTS 120 (292)
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 99999998653211 123345568888887 443
No 181
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=98.12 E-value=2e-05 Score=70.42 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=68.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-CHHhhhcC---CcEEEEccCChh----cccHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-TREDVVSE---AGLFVTTTENAD----IIMVRH 137 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~~~~~~~~---aDvvi~a~G~~~----~i~~~~ 137 (243)
+|.|+|.|.+|..+|+.+...|.+|+++|+++.+.......|..+. ++.+..+. +|+|+.|..... ++. ..
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~-~l 80 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATID-EL 80 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHH-HH
Confidence 6999999999999999999999999999999988766666777543 56666554 699998876542 232 34
Q ss_pred HccCCCCeEEEEecCCC
Q 037949 138 MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~~ 154 (243)
...++++.++++.+...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (301)
T PRK09599 81 APLLSPGDIVIDGGNSY 97 (301)
T ss_pred HhhCCCCCEEEeCCCCC
Confidence 56678899999987654
No 182
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=98.11 E-value=1.9e-05 Score=70.39 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=69.8
Q ss_pred cCcEEEEE--cCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 63 AGKIAVDC--GHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 63 ~g~~vlVi--G~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+.+++|+ |.|++|+.+++.++.+|++|++++.++.+++.+...|++ +++ ..+ .. .+.|++++++|
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g 221 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVG 221 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCC
Confidence 56667775 789999999999999999999999999888888778874 222 211 11 26899999999
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
..... +.+..++++|+++.+|..
T Consensus 222 ~~~~~--~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 222 GGLTG--QILLAMPYGSTLYVYGYL 244 (324)
T ss_pred cHHHH--HHHHhhCCCCEEEEEEec
Confidence 86643 468889999999999864
No 183
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=98.11 E-value=1.9e-05 Score=70.35 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=75.6
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------hhhcCCcEE
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------DVVSEAGLF 123 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------~~~~~aDvv 123 (243)
|+++.+. . ..+|++++|+|+|.+|+.+++.++..|++|++++.++.+.......|.+ +++.. ....+.|++
T Consensus 152 ~~~l~~~-~-~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v 229 (330)
T cd08245 152 YSALRDA-G-PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVI 229 (330)
T ss_pred HHHHHhh-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEE
Confidence 4555432 2 3578999999999999999999999999999999988877666666653 22210 112368999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+++.+....+. +.++.++++|.++++|..
T Consensus 230 i~~~~~~~~~~-~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 230 LVTVVSGAAAE-AALGGLRRGGRIVLVGLP 258 (330)
T ss_pred EECCCcHHHHH-HHHHhcccCCEEEEECCC
Confidence 99987766664 579999999999998864
No 184
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=98.11 E-value=3.8e-05 Score=68.74 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH--H----h------hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR--E----D------VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~--~----~------~~--~~aDvvi 124 (243)
..+|++|+|.|.|.+|..+++.++..|++ |++++.++.+...+...|.+ +++. . + .. .+.|+++
T Consensus 159 ~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vi 238 (341)
T cd08262 159 LTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIF 238 (341)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEE
Confidence 45799999999999999999999999996 67778888877666666753 2221 0 1 11 3589999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|....+. +.+..++++|+++++|...
T Consensus 239 d~~g~~~~~~-~~~~~l~~~g~~v~~g~~~ 267 (341)
T cd08262 239 ECVGAPGLIQ-QIIEGAPPGGRIVVVGVCM 267 (341)
T ss_pred ECCCCHHHHH-HHHHHhccCCEEEEECCCC
Confidence 9998754454 4688899999999998653
No 185
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.10 E-value=2.9e-05 Score=64.77 Aligned_cols=93 Identities=24% Similarity=0.257 Sum_probs=62.8
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCCc-----ccCH---HhhhcCCcEEEEc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGIP-----VLTR---EDVVSEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~~-----~~~~---~~~~~~aDvvi~a 126 (243)
.+++++++|+|+ |++|+.++..+...|++|+++++++.++..... .+.. ..+. .+.+.++|+|+.+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 568999999996 999999999999999999999998876533222 1221 1122 3456789999998
Q ss_pred cCChhcccHHHHc-cCCCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMK-QMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~-~l~~g~~vvnvg~~~ 154 (243)
+....... .... ..+++.+++++...+
T Consensus 105 t~~g~~~~-~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 105 GAAGVELL-EKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred CCCCceec-hhhhcccCceeEEEEccCCC
Confidence 75543211 1122 234566777776654
No 186
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=98.10 E-value=1.8e-05 Score=70.42 Aligned_cols=100 Identities=14% Similarity=0.024 Sum_probs=75.8
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHh-hhcCCcEEEEccC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRED-VVSEAGLFVTTTE 128 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~-~~~~aDvvi~a~G 128 (243)
|+++..+ . ..+|.+++|.|.|++|+.+++.++..|++|++++.++.+...+...|++ +.+..+ .-++.|+++++++
T Consensus 157 ~~~~~~~-~-~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~ 234 (329)
T cd08298 157 YRALKLA-G-LKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAP 234 (329)
T ss_pred HHHHHhh-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCC
Confidence 4555322 2 4579999999999999999999999999999998888877777667764 222221 1246899999877
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
....+. +.++.++++|+++.+|..
T Consensus 235 ~~~~~~-~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 235 VGALVP-AALRAVKKGGRVVLAGIH 258 (329)
T ss_pred cHHHHH-HHHHHhhcCCEEEEEcCC
Confidence 666664 579999999999998854
No 187
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.09 E-value=2e-05 Score=58.03 Aligned_cols=85 Identities=18% Similarity=0.245 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCC---CEEEEE-eCCchhHHHHh-hcCCccc--CHHhhhcCCcEEEEccCChhc--ccHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVG---ARVMGT-EIDLICALQAL-TEGIPVL--TREDVVSEAGLFVTTTENADI--IMVR 136 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~G---a~V~v~-d~~~~r~~~a~-~~G~~~~--~~~~~~~~aDvvi~a~G~~~~--i~~~ 136 (243)
+++|+|+|.+|..+++.+...| .+|+++ ++++++..... ..+..+. +..++++.+|+|+.|+..... +-.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~- 79 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS- 79 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH-
Confidence 5889999999999999999999 799854 99999875543 4455433 577888899999999744322 111
Q ss_pred HHccCCCCeEEEEec
Q 037949 137 HMKQMKNAAIVCNIG 151 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg 151 (243)
.+....++..++++.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 233345677777653
No 188
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.09 E-value=3.2e-05 Score=72.20 Aligned_cols=92 Identities=11% Similarity=0.134 Sum_probs=67.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcC-CcccCH---HhhhcCCcEEEEccCChhc-c
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEG-IPVLTR---EDVVSEAGLFVTTTENADI-I 133 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G-~~~~~~---~~~~~~aDvvi~a~G~~~~-i 133 (243)
.+.|++++|+|+|.+|..++..|...|+ +++++.+++.+..... ..+ ..+.++ .+.+..+|+||.||+.++. +
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 3689999999999999999999999997 7999999987753322 233 333333 4557789999999998764 5
Q ss_pred cHHHHccCCCCeEEEEecCCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+... .+.-+++..+.+.
T Consensus 258 ~~~~~~--~~~~~~iDLavPR 276 (414)
T PRK13940 258 TCKYVG--DKPRVFIDISIPQ 276 (414)
T ss_pred CHHHhC--CCCeEEEEeCCCC
Confidence 544433 2335677888763
No 189
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.09 E-value=2.1e-05 Score=70.74 Aligned_cols=93 Identities=22% Similarity=0.219 Sum_probs=71.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH--------Hh----hh--cCCcEEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR--------ED----VV--SEAGLFV 124 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~--------~~----~~--~~aDvvi 124 (243)
..+|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++. .+ .. .+.|+++
T Consensus 160 ~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 160 VRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEE
Confidence 46899999999999999999999999997 88888888776666656653 2211 11 12 2489999
Q ss_pred EccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 125 TTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 125 ~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|.|....+. ..++.++++|+++.+|..+
T Consensus 240 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 268 (343)
T cd05285 240 ECTGAESCIQ-TAIYATRPGGTVVLVGMGK 268 (343)
T ss_pred ECCCCHHHHH-HHHHHhhcCCEEEEEccCC
Confidence 9998765554 5789999999999988654
No 190
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.08 E-value=2.7e-05 Score=68.30 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=75.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-cc-CHHhhh-cCCcEEEEc
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VL-TREDVV-SEAGLFVTT 126 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~-~~~~~~-~~aDvvi~a 126 (243)
++++.+.. ..+|++++|.|+ |.+|..+++.++.+|++|+.++.++.+...+...|+. .+ ...+.. .+.|+++++
T Consensus 122 ~~~~~~~~--~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vl~~ 199 (305)
T cd08270 122 LRALRRGG--PLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGAPVDLVVDS 199 (305)
T ss_pred HHHHHHhC--CCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccccccCCCceEEEEC
Confidence 45554433 236999999999 7999999999999999999998888887777777763 21 112211 368999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|... +. +.++.++.+|+++.+|...
T Consensus 200 ~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 225 (305)
T cd08270 200 VGGPQ-LA-RALELLAPGGTVVSVGSSS 225 (305)
T ss_pred CCcHH-HH-HHHHHhcCCCEEEEEeccC
Confidence 98764 44 5799999999999998653
No 191
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=98.07 E-value=4e-05 Score=68.84 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=72.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++ ..+ .. ++.|++++|.|
T Consensus 160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999996 88888888877666667763 222 211 11 36899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. +.++.++++++++.+|...
T Consensus 240 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 264 (340)
T TIGR00692 240 APKALE-QGLQAVTPGGRVSLLGLPP 264 (340)
T ss_pred CHHHHH-HHHHhhcCCCEEEEEccCC
Confidence 766664 5788999999999998653
No 192
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=98.07 E-value=1.3e-05 Score=67.89 Aligned_cols=89 Identities=21% Similarity=0.296 Sum_probs=60.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcC-CcccC---HHhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEG-IPVLT---REDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G-~~~~~---~~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|..-++.|...|++|+|++++... +......| +.... ..+.+.++|+|+.|++.+. ++.
T Consensus 6 ~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~-ln~ 84 (205)
T TIGR01470 6 NLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE-LNR 84 (205)
T ss_pred EcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH-HHH
Confidence 468999999999999999999999999999999776542 21222233 22211 1334678999999998865 333
Q ss_pred HHHccCCCCeEEEEe
Q 037949 136 RHMKQMKNAAIVCNI 150 (243)
Q Consensus 136 ~~l~~l~~g~~vvnv 150 (243)
......+..++.+|+
T Consensus 85 ~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 85 RVAHAARARGVPVNV 99 (205)
T ss_pred HHHHHHHHcCCEEEE
Confidence 444444455555553
No 193
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.07 E-value=2.8e-05 Score=69.02 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=59.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--------------cCC-------------cccCHHhhh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT--------------EGI-------------PVLTREDVV 117 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--------------~G~-------------~~~~~~~~~ 117 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+.. .|. ...+..+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 83 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSYESL 83 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCHHHh
Confidence 68999999999999999999999999999999987654321 111 011111456
Q ss_pred cCCcEEEEccCChhcccHHH---H-ccCCCCeEEEEec
Q 037949 118 SEAGLFVTTTENADIIMVRH---M-KQMKNAAIVCNIG 151 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~---l-~~l~~g~~vvnvg 151 (243)
+++|+|++|+.....+..+. + ..++++.++++..
T Consensus 84 ~~aDlVieav~e~~~~k~~~~~~l~~~~~~~~il~S~t 121 (291)
T PRK06035 84 SDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNT 121 (291)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEcC
Confidence 78999999986543211222 2 3457778777543
No 194
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=98.07 E-value=3.8e-05 Score=68.97 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=71.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----RED---VV--SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~--~~aDvvi~a~G~ 129 (243)
.+|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++ ... .. .+.|++++|+|.
T Consensus 162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~ 241 (341)
T cd05281 162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGN 241 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCC
Confidence 479999999999999999999999999 788888788777666667763 222 111 11 368999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. +.++.++++|+++..|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (341)
T cd05281 242 PKAIE-QGLKALTPGGRVSILGLPP 265 (341)
T ss_pred HHHHH-HHHHHhccCCEEEEEccCC
Confidence 76664 4788999999999988654
No 195
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=98.07 E-value=1.5e-05 Score=70.71 Aligned_cols=85 Identities=14% Similarity=0.168 Sum_probs=67.1
Q ss_pred EEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc------HHHHccC
Q 037949 69 DCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIM------VRHMKQM 141 (243)
Q Consensus 69 ViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~------~~~l~~l 141 (243)
|||.|.+|..+|+.+...|.+|+++|+++.+.......|... .++.++++++|+|+.|...+..+. ......+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 589999999999999999999999999998876666677653 467778889999999987643322 1234567
Q ss_pred CCCeEEEEecCC
Q 037949 142 KNAAIVCNIGHF 153 (243)
Q Consensus 142 ~~g~~vvnvg~~ 153 (243)
+++.++++.+..
T Consensus 81 ~~g~~vid~st~ 92 (288)
T TIGR01692 81 AKGSLLIDCSTI 92 (288)
T ss_pred CCCCEEEECCCC
Confidence 888999998744
No 196
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=98.06 E-value=3.5e-05 Score=69.70 Aligned_cols=98 Identities=16% Similarity=0.105 Sum_probs=70.7
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
.-++++|+|+|.+|+..++.+.. ... +|.++|+++++..... +.|.. +.+.+++++++|+|+.||.+. +.
T Consensus 127 ~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~ 206 (325)
T TIGR02371 127 DSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPV 206 (325)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcE
Confidence 35899999999999987766654 333 7999999998864322 23532 345788889999999998664 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+.. +.+++|..|+++|... .|+|...+.
T Consensus 207 ~~~---~~l~~g~~v~~vGs~~p~~~Eld~~~l~ 237 (325)
T TIGR02371 207 VKA---DWVSEGTHINAIGADAPGKQELDPEILK 237 (325)
T ss_pred ecH---HHcCCCCEEEecCCCCcccccCCHHHHh
Confidence 543 4569999999999763 467765443
No 197
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=98.06 E-value=4.8e-06 Score=62.78 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=56.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--cCHHhhhcCCcEEEEccCChhcccHHHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--LTREDVVSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--~~~~~~~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.+.|++|+|+|+|++|..-++.|...|++|+++..+.... +..++. ...++.+.++|+|+.|++.+. ++.+..
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~~~~l~~~~lV~~at~d~~-~n~~i~ 78 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREFEEDLDGADLVFAATDDPE-LNEAIY 78 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-GGGCTTESEEEE-SS-HH-HHHHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhHHHHHhhheEEEecCCCHH-HHHHHH
Confidence 3689999999999999999999999999999997775111 111221 123455778999999988765 344444
Q ss_pred ccCCCCeEEEEec
Q 037949 139 KQMKNAAIVCNIG 151 (243)
Q Consensus 139 ~~l~~g~~vvnvg 151 (243)
...+.-++.+|+.
T Consensus 79 ~~a~~~~i~vn~~ 91 (103)
T PF13241_consen 79 ADARARGILVNVV 91 (103)
T ss_dssp HHHHHTTSEEEET
T ss_pred HHHhhCCEEEEEC
Confidence 5455455566543
No 198
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=98.06 E-value=2.8e-05 Score=69.47 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=75.0
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHh-CCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hhh----hc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKA-VGARVMGTEIDLICALQALTEGIP-VLTR------EDV----VS 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~-~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~~----~~ 118 (243)
|+++... . ..+|++|+|.|.|++|..+++.++. .|++|++++.++++.+.+...|++ +++. .+. ..
T Consensus 152 ~~~~~~~-~-~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 152 YKAIKVS-G-IKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence 5665333 2 4689999999999999999999998 599999999999888777777764 2221 111 23
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.|+++.+++....+. +.++.++++|.++.+|...
T Consensus 230 ~~d~vi~~~~~~~~~~-~~~~~l~~~G~~v~~g~~~ 264 (338)
T PRK09422 230 GAHAAVVTAVAKAAFN-QAVDAVRAGGRVVAVGLPP 264 (338)
T ss_pred CCcEEEEeCCCHHHHH-HHHHhccCCCEEEEEeeCC
Confidence 5786666666666665 5799999999999998653
No 199
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=98.06 E-value=2.3e-05 Score=67.48 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=64.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHHHhh-cC----C---cccCHHhhh-cCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQALT-EG----I---PVLTREDVV-SEA 120 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~a~~-~G----~---~~~~~~~~~-~~a 120 (243)
.+.|++++|.|+|.||+.+++.|..+|++|+ ++|. |...+..... .| + ..++.++.+ .++
T Consensus 28 ~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~~~ 107 (227)
T cd01076 28 GLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLELDC 107 (227)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceeecc
Confidence 5789999999999999999999999999988 7887 6555443332 22 1 112223332 379
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEID 158 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id 158 (243)
||+++|+ ....++.+....++ +.+|.-|.. .++.
T Consensus 108 Dvlip~a-~~~~i~~~~~~~l~--a~~I~egAN-~~~t 141 (227)
T cd01076 108 DILIPAA-LENQITADNADRIK--AKIIVEAAN-GPTT 141 (227)
T ss_pred cEEEecC-ccCccCHHHHhhce--eeEEEeCCC-CCCC
Confidence 9999997 44567777777774 666654433 3344
No 200
>PLN02702 L-idonate 5-dehydrogenase
Probab=98.06 E-value=2.6e-05 Score=70.78 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCcc-c-------CHHhh---h-----cCCcEE
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIPV-L-------TREDV---V-----SEAGLF 123 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~~-~-------~~~~~---~-----~~aDvv 123 (243)
..+|++++|.|.|++|..+++.++.+|++ |++++.++.+...+...|++. . +..+. + ..+|++
T Consensus 179 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (364)
T PLN02702 179 IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVS 258 (364)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEE
Confidence 35799999999999999999999999995 778888888877666677642 1 11111 1 258999
Q ss_pred EEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 124 VTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 124 i~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++++|....+. +.++.++++|+++.+|..
T Consensus 259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 287 (364)
T PLN02702 259 FDCVGFNKTMS-TALEATRAGGKVCLVGMG 287 (364)
T ss_pred EECCCCHHHHH-HHHHHHhcCCEEEEEccC
Confidence 99999766664 579999999999999864
No 201
>PRK06141 ornithine cyclodeaminase; Validated
Probab=98.05 E-value=4.4e-05 Score=68.75 Aligned_cols=97 Identities=20% Similarity=0.143 Sum_probs=69.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhhc----CCc--c-cCHHhhhcCCcEEEEccCChh-c
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALTE----GIP--V-LTREDVVSEAGLFVTTTENAD-I 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~~----G~~--~-~~~~~~~~~aDvvi~a~G~~~-~ 132 (243)
..++++|+|+|.+|+.+++.+.. ++. +|.++++++++....... |.. + .+.++++.++|+|+.||+.+. +
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~pv 203 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEPL 203 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCCE
Confidence 56899999999999999876654 564 899999998875443322 422 2 356777889999999987653 3
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
+.. +.+++|..|+.+|... .+++...+
T Consensus 204 l~~---~~l~~g~~i~~ig~~~~~~~El~~~~~ 233 (314)
T PRK06141 204 VRG---EWLKPGTHLDLVGNFTPDMRECDDEAI 233 (314)
T ss_pred ecH---HHcCCCCEEEeeCCCCcccccCCHHHH
Confidence 543 4578999888888763 35665443
No 202
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=98.05 E-value=3.9e-05 Score=69.17 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=71.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|.|.+|..+++.++++|++ |++++.++.+...+...|++ +++ ..+ .. .++|++++++
T Consensus 172 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~ 251 (350)
T cd08256 172 IKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEAT 251 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 35799999999999999999999999985 67788888887666667764 222 111 11 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. ..++.++++|+++++|...
T Consensus 252 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 277 (350)
T cd08256 252 GHPSAVE-QGLNMIRKLGRFVEFSVFG 277 (350)
T ss_pred CChHHHH-HHHHHhhcCCEEEEEccCC
Confidence 8655554 4789999999999998654
No 203
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=98.05 E-value=1.8e-05 Score=73.07 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=71.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH------------------------
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE------------------------ 114 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~------------------------ 114 (243)
..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+...+...|.+ +++.+
T Consensus 187 ~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (398)
T TIGR01751 187 VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFK 266 (398)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcch
Confidence 357899999998 8999999999999999988888888877777777753 22210
Q ss_pred ---h----hh--cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 115 ---D----VV--SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 115 ---~----~~--~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+ .. .++|++++|+|.. .+. ..++.++++|+++.+|...
T Consensus 267 ~~~~~~~~~~~~~g~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 313 (398)
T TIGR01751 267 RFGKRIRELTGGEDPDIVFEHPGRA-TFP-TSVFVCRRGGMVVICGGTT 313 (398)
T ss_pred hHHHHHHHHcCCCCceEEEECCcHH-HHH-HHHHhhccCCEEEEEcccc
Confidence 0 11 3599999999864 454 4789999999999998653
No 204
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=98.05 E-value=2.7e-05 Score=68.78 Aligned_cols=90 Identities=22% Similarity=0.210 Sum_probs=70.8
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH----h---hh--cCCcEEEEccCChh
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE----D---VV--SEAGLFVTTTENAD 131 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~----~---~~--~~aDvvi~a~G~~~ 131 (243)
.+++|+|.|+ |.+|+.+++.++.+|++|++++.++++...+...|.+ +++.. + .. .++|++++++|..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~- 224 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD- 224 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-
Confidence 3579999998 8999999999999999999999999887777777764 22211 1 11 3589999999875
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+. +.++.++++|+++..|..+
T Consensus 225 ~~~-~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 225 VLA-NLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred HHH-HHHHhhcCCCEEEEEecCC
Confidence 344 5799999999999998653
No 205
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.05 E-value=2.1e-05 Score=75.31 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=62.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+ ...|. . +.+.+ .+.+
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~~~ 86 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DLAD 86 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhCC
Confidence 789999999999999999999999999999999987553 23341 1 12233 3568
Q ss_pred CcEEEEccCChhcccHHH---Hcc-CCCCeEEE-EecCC
Q 037949 120 AGLFVTTTENADIIMVRH---MKQ-MKNAAIVC-NIGHF 153 (243)
Q Consensus 120 aDvvi~a~G~~~~i~~~~---l~~-l~~g~~vv-nvg~~ 153 (243)
+|+||+|......+.... ++. +++++++. |.+..
T Consensus 87 aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl 125 (507)
T PRK08268 87 CDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSL 125 (507)
T ss_pred CCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 999999976543332222 333 47788885 66553
No 206
>PLN02712 arogenate dehydrogenase
Probab=98.04 E-value=2.6e-05 Score=76.91 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=69.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhc-CCcEEEEccCCh---hcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVS-EAGLFVTTTENA---DIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~-~aDvvi~a~G~~---~~i~~ 135 (243)
...+++|+|||+|.||..+|+.++..|.+|+++|+++.. ..+...|+.. .+.++++. .+|+|+.|+... .++..
T Consensus 366 ~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~vi~~ 444 (667)
T PLN02712 366 DGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKVLKS 444 (667)
T ss_pred CCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHHHHH
Confidence 357789999999999999999999999999999998653 3455667643 34566554 589999997643 33432
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
-....+++++++++++...
T Consensus 445 l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 445 LPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred HHHhcCCCCcEEEECCCcc
Confidence 1123578899999998875
No 207
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=98.03 E-value=3.5e-05 Score=70.45 Aligned_cols=101 Identities=17% Similarity=0.086 Sum_probs=75.3
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccC-----HHhhh-----c
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLT-----REDVV-----S 118 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~-----~~~~~-----~ 118 (243)
.|+++..+ . ..+|++|+|.|.|.+|+.+++.++.+|+ +|+++|.++.+...+...|+..++ ..+.+ .
T Consensus 165 a~~a~~~~-~-~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~ 242 (375)
T cd08282 165 GWHGLELA-G-VQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPG 242 (375)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCC
Confidence 35665332 2 3579999999999999999999999998 799999998888777777753221 11111 2
Q ss_pred CCcEEEEccCChh-----------cccHHHHccCCCCeEEEEecCC
Q 037949 119 EAGLFVTTTENAD-----------IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 119 ~aDvvi~a~G~~~-----------~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.|++++|+|... .++ +.++.++++|+++.+|..
T Consensus 243 ~~d~v~d~~g~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~g~~ 287 (375)
T cd08282 243 GVDRAVDCVGYEARDRGGEAQPNLVLN-QLIRVTRPGGGIGIVGVY 287 (375)
T ss_pred CCCEEEECCCCcccccccccchHHHHH-HHHHHhhcCcEEEEEecc
Confidence 5899999988653 254 468889999999888764
No 208
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.03 E-value=3.9e-05 Score=69.79 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=69.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh-hcC-CcccCHHhhhcCCcEEEEccCChhc--c
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL-TEG-IPVLTREDVVSEAGLFVTTTENADI--I 133 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~-~~G-~~~~~~~~~~~~aDvvi~a~G~~~~--i 133 (243)
.+.+++|+|+|+ |.||..+++.+.. .|+ +++++++++.++.... +.+ .++.++++.+.++|+|+.+++.++. +
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~~I 231 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGVEI 231 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCCcC
Confidence 478999999999 7999999999975 575 8999999877764422 222 2344567778899999999887543 5
Q ss_pred cHHHHccCCCCeEEEEecCCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+ .++++.+++.+++..
T Consensus 232 ~~~---~l~~~~~viDiAvPR 249 (340)
T PRK14982 232 DPE---TLKKPCLMIDGGYPK 249 (340)
T ss_pred CHH---HhCCCeEEEEecCCC
Confidence 544 457899999999874
No 209
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.03 E-value=2.7e-05 Score=69.86 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=68.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-C-----HHh--hh--cCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-T-----RED--VV--SEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-~-----~~~--~~--~~aDvvi~a~G~ 129 (243)
..+|++|+|.|+ |++|+.+++.++.+|++|++++.++ +...+...|++.+ + ..+ .. .++|++++++|.
T Consensus 175 ~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 253 (350)
T cd08274 175 VGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGG 253 (350)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCH
Confidence 357999999998 8999999999999999988877655 5556666676321 1 111 11 369999999987
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
. .++ ..++.++++|+++++|..
T Consensus 254 ~-~~~-~~~~~l~~~G~~v~~g~~ 275 (350)
T cd08274 254 P-LFP-DLLRLLRPGGRYVTAGAI 275 (350)
T ss_pred H-HHH-HHHHHhccCCEEEEeccc
Confidence 5 343 579999999999998854
No 210
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.02 E-value=2.6e-05 Score=67.27 Aligned_cols=36 Identities=31% Similarity=0.580 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|++ .||+.+|+.|...|++|+++++++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 579999999987 999999999999999999987754
No 211
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.02 E-value=3.2e-05 Score=68.52 Aligned_cols=84 Identities=19% Similarity=0.135 Sum_probs=59.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc-------------------------CCc-ccCHHhhhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE-------------------------GIP-VLTREDVVS 118 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~-------------------------G~~-~~~~~~~~~ 118 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++..++.+... ... ..+.+++++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~ 83 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK 83 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc
Confidence 579999999999999999999999999999998765443211 111 224556678
Q ss_pred CCcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 119 EAGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
++|+|++|.... .++. +.-..++++.+++.
T Consensus 84 ~aDlVieavpe~~~~k~~~~~-~l~~~~~~~~ii~s 118 (287)
T PRK08293 84 DADLVIEAVPEDPEIKGDFYE-ELAKVAPEKTIFAT 118 (287)
T ss_pred CCCEEEEeccCCHHHHHHHHH-HHHhhCCCCCEEEE
Confidence 999999997643 2222 23345577777754
No 212
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=1.2e-05 Score=69.57 Aligned_cols=36 Identities=36% Similarity=0.480 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+++|+.|...|++|+++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~ 43 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND 43 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch
Confidence 679999999985 899999999999999999998874
No 213
>PLN02256 arogenate dehydrogenase
Probab=98.02 E-value=4.2e-05 Score=68.66 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=66.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhh-cCCcEEEEccCChh---cccHHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVV-SEAGLFVTTTENAD---IIMVRH 137 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~-~~aDvvi~a~G~~~---~i~~~~ 137 (243)
.+.+++|+|+|.||..++..++..|.+|+++|+++.. ..+...|+.. .+.++.+ .++|+|+.|+.... ++. +.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~-~l 112 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDYS-DIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLR-SL 112 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccHH-HHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHH-hh
Confidence 5678999999999999999999999999999998753 3455567643 3455554 46999999986532 232 22
Q ss_pred -HccCCCCeEEEEecCCC
Q 037949 138 -MKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 -l~~l~~g~~vvnvg~~~ 154 (243)
...++++.+|++++...
T Consensus 113 ~~~~l~~~~iviDv~SvK 130 (304)
T PLN02256 113 PLQRLKRSTLFVDVLSVK 130 (304)
T ss_pred hhhccCCCCEEEecCCch
Confidence 34467899999988854
No 214
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.01 E-value=2.9e-05 Score=67.39 Aligned_cols=36 Identities=31% Similarity=0.326 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+.+|+.+...|++|++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~ 42 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPD 42 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence 578999999973 899999999999999998876543
No 215
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=98.00 E-value=2.3e-05 Score=69.74 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccCH-----H--hh--hcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLTR-----E--DV--VSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~~-----~--~~--~~~aDvvi~a~G~ 129 (243)
..+|++++|.|+|.+|..+++.++..|++ |++++.++.+...+...|.+ +++. . .. -.++|++++++|.
T Consensus 157 ~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~ 236 (334)
T cd08234 157 IKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGV 236 (334)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCC
Confidence 35789999999999999999999999997 88888888877666556653 2211 1 11 1468999999887
Q ss_pred hhcccHHHHccCCCCeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
...+. ..++.++++|+++.+|..+
T Consensus 237 ~~~~~-~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 237 PKTLE-QAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred hHHHH-HHHHHHhcCCEEEEEecCC
Confidence 66554 5788899999999998654
No 216
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=98.00 E-value=4.3e-05 Score=68.08 Aligned_cols=88 Identities=17% Similarity=0.147 Sum_probs=66.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHH------HH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVR------HM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~------~l 138 (243)
+|.+||.|.+|..+++.+...|.+|+++|+++. .......|.. +.+..++.+.+|+||.|......+..- .+
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 589999999999999999999999999999875 3344456764 345677788999999998765433211 23
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..+++|.++++++...
T Consensus 81 ~~~~~g~ivvd~sT~~ 96 (292)
T PRK15059 81 KASLKGKTIVDMSSIS 96 (292)
T ss_pred ccCCCCCEEEECCCCC
Confidence 4467888899877543
No 217
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.00 E-value=8.1e-06 Score=70.92 Aligned_cols=37 Identities=22% Similarity=0.136 Sum_probs=33.0
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++||+++|+|++ +||+++|+.|...|++|++.++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 3679999999996 699999999999999999988774
No 218
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.99 E-value=2.9e-05 Score=65.61 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=57.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-HHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-ALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|...++.|...|++|++++++..+ +......+ .... .. ...+.++|+||.||+.+.. +.
T Consensus 7 ~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~el-N~ 85 (202)
T PRK06718 7 DLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRV-NE 85 (202)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHH-HH
Confidence 478999999999999999999999999999999765432 22222222 1111 11 2346789999999988763 33
Q ss_pred HHHccCCCCeEEEE
Q 037949 136 RHMKQMKNAAIVCN 149 (243)
Q Consensus 136 ~~l~~l~~g~~vvn 149 (243)
......+.+..+++
T Consensus 86 ~i~~~a~~~~lvn~ 99 (202)
T PRK06718 86 QVKEDLPENALFNV 99 (202)
T ss_pred HHHHHHHhCCcEEE
Confidence 22233344544444
No 219
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.99 E-value=4.3e-05 Score=66.68 Aligned_cols=84 Identities=12% Similarity=0.181 Sum_probs=62.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC----EEEEE-eCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcccH---H
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA----RVMGT-EIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADIIMV---R 136 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga----~V~v~-d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~---~ 136 (243)
++.+||+|.+|..++..+...|. +|+++ ++++.+...+...|+.+ .+..+.++++|+||.|+. +..+.. +
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~-~~~~~~vl~~ 80 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVK-PQVVKDVLTE 80 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEEC-cHHHHHHHHH
Confidence 58999999999999999999997 88998 99988876666677754 356667788999999983 333221 1
Q ss_pred HHccCCCCeEEEEe
Q 037949 137 HMKQMKNAAIVCNI 150 (243)
Q Consensus 137 ~l~~l~~g~~vvnv 150 (243)
....++++.+++++
T Consensus 81 l~~~~~~~~~iIs~ 94 (266)
T PLN02688 81 LRPLLSKDKLLVSV 94 (266)
T ss_pred HHhhcCCCCEEEEe
Confidence 22345677777765
No 220
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=97.99 E-value=5.2e-05 Score=67.07 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=68.6
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+ |.+|+.+++.++++|++|+++..++.+.......|.+ +.+ ..+ .. .++|++++|+
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 457999999987 7999999999999999988876666555555556653 221 111 11 2699999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. +.++.++++|+++.+|..
T Consensus 217 g~~~-~~-~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 217 GGKL-AG-ELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred CChh-HH-HHHHhhcCCcEEEEEecC
Confidence 8753 43 579999999999999864
No 221
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.98 E-value=2.1e-05 Score=67.79 Aligned_cols=40 Identities=33% Similarity=0.424 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.+..
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~ 45 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAE 45 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 9999999999999999999999877653
No 222
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.98 E-value=3e-05 Score=67.84 Aligned_cols=40 Identities=25% Similarity=0.226 Sum_probs=35.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+++++|+|+ |.||+.+|+.+...|++|+++++++..+..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~ 43 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA 43 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3689999998 699999999999999999999998876543
No 223
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.98 E-value=5.2e-05 Score=68.38 Aligned_cols=87 Identities=15% Similarity=0.059 Sum_probs=66.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc--------CC------c-ccCHHhhhcCCcEEEEccCC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE--------GI------P-VLTREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~--------G~------~-~~~~~~~~~~aDvvi~a~G~ 129 (243)
.+|.|+|+|.+|..+|..|...|.+|.++++++.+.+..... |. . +.++.+.++.+|+|+.|+..
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~ 84 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPS 84 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECch
Confidence 479999999999999999999999999999988765433332 31 1 12456667889999999877
Q ss_pred hhcccHHHHccCCCCeEEEEecCC
Q 037949 130 ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
..+ .+.++.++++..++++.-+
T Consensus 85 ~~~--~~v~~~l~~~~~vi~~~~G 106 (328)
T PRK14618 85 KAL--RETLAGLPRALGYVSCAKG 106 (328)
T ss_pred HHH--HHHHHhcCcCCEEEEEeec
Confidence 653 3567888888888877553
No 224
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.98 E-value=5.4e-06 Score=69.86 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=40.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTE 106 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~ 106 (243)
+.|-+++|+|++ +||++.|+++...|=+|+++.++++++.++...
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~ 48 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE 48 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc
Confidence 468999999999 999999999999999999999999998776653
No 225
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=97.97 E-value=4.2e-05 Score=73.16 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=60.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVS 118 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~ 118 (243)
=++|.|||+|.+|..+|..+...|.+|+++|+++++++.+ ...|. . +.+++ .+.
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~l~ 83 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLH-ALA 83 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHH-HhC
Confidence 3679999999999999999999999999999999876543 22232 1 12233 356
Q ss_pred CCcEEEEccCChhcccHHH---H-ccCCCCeEEE-EecC
Q 037949 119 EAGLFVTTTENADIIMVRH---M-KQMKNAAIVC-NIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~---l-~~l~~g~~vv-nvg~ 152 (243)
++|+||+|......+.... + ..+++++++. |.+.
T Consensus 84 ~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTSt 122 (503)
T TIGR02279 84 DAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSS 122 (503)
T ss_pred CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 8999999976433332222 3 3457777766 5443
No 226
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.96 E-value=5.3e-05 Score=66.69 Aligned_cols=87 Identities=20% Similarity=0.278 Sum_probs=64.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhhcCCc--ccCHHhhhcCCcEEEEccCChhccc--HHHHc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALTEGIP--VLTREDVVSEAGLFVTTTENADIIM--VRHMK 139 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~~G~~--~~~~~~~~~~aDvvi~a~G~~~~i~--~~~l~ 139 (243)
+++|+|+|.+|..++..++..|. +|+++|+++.+...+...|.. ..+..++. ++|+||.|+....+.. .+...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aD~Vilavp~~~~~~~~~~l~~ 80 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELK-KCDVIFLAIPVDAIIEILPKLLD 80 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHh-cCCEEEEeCcHHHHHHHHHHHhc
Confidence 68999999999999999999885 788899999887777667752 33455544 5999999986543321 12234
Q ss_pred cCCCCeEEEEecCCC
Q 037949 140 QMKNAAIVCNIGHFD 154 (243)
Q Consensus 140 ~l~~g~~vvnvg~~~ 154 (243)
++++.+|+.+|...
T Consensus 81 -l~~~~iv~d~gs~k 94 (275)
T PRK08507 81 -IKENTTIIDLGSTK 94 (275)
T ss_pred -cCCCCEEEECccch
Confidence 67888898877643
No 227
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.96 E-value=3.7e-05 Score=66.49 Aligned_cols=42 Identities=24% Similarity=0.238 Sum_probs=37.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.||+++|+|++ .||+.+++.+...|++|+++++++.++..
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~ 47 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLAS 47 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 3679999999987 89999999999999999999998876543
No 228
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.96 E-value=3.9e-05 Score=67.99 Aligned_cols=41 Identities=27% Similarity=0.381 Sum_probs=36.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.++|++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~ 47 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA 47 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999999985 8999999999999999999999887653
No 229
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.96 E-value=2.9e-05 Score=68.07 Aligned_cols=40 Identities=25% Similarity=0.290 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~ 44 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR 44 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 679999999976 9999999999999999999999876553
No 230
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.96 E-value=8.9e-06 Score=70.62 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.2
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|+ ++||+++|+.+...|++|++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 357999999998 489999999999999999998765
No 231
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=97.96 E-value=5.4e-05 Score=67.70 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=74.5
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccCH-----Hhhh---cCC
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLTR-----EDVV---SEA 120 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~~-----~~~~---~~a 120 (243)
++++.+.. . ++|++|+|.|+|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++. .+.. .+.
T Consensus 155 ~~~l~~~~-~-~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~v 232 (339)
T cd08232 155 LHAVNRAG-D-LAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDF 232 (339)
T ss_pred HHHHHhcC-C-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCc
Confidence 45554432 2 389999999999999999999999999 799998887776655566653 2221 1111 248
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+++++.|....+. +.++.++++|++++.|..+
T Consensus 233 d~vld~~g~~~~~~-~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 233 DVVFEASGAPAALA-SALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred cEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 99999988655554 5789999999999988543
No 232
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=97.95 E-value=5.1e-05 Score=67.27 Aligned_cols=91 Identities=20% Similarity=0.150 Sum_probs=69.6
Q ss_pred ccCc-EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH-------hhh-cCCcEEEEccCCh
Q 037949 62 IAGK-IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE-------DVV-SEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~-~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~-------~~~-~~aDvvi~a~G~~ 130 (243)
.+|+ +|+|.|+ |.+|..+++.++.+|++|++++.++.+...+...|.+ +.+.. ... ..+|++++|+|..
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 222 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH 222 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH
Confidence 5688 9999998 8999999999999999998887777666666666753 22211 111 2479999999876
Q ss_pred hcccHHHHccCCCCeEEEEecCCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
. ++ +.++.++++|+++.+|...
T Consensus 223 ~-~~-~~~~~l~~~G~~v~~g~~~ 244 (323)
T TIGR02823 223 T-LA-NVLAQLKYGGAVAACGLAG 244 (323)
T ss_pred H-HH-HHHHHhCCCCEEEEEcccC
Confidence 4 44 5799999999999998653
No 233
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.95 E-value=1.8e-05 Score=76.61 Aligned_cols=70 Identities=23% Similarity=0.168 Sum_probs=52.5
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhhcCCcc-cC-------
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL---------------------ICALQALTEGIPV-LT------- 112 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~---------------------~r~~~a~~~G~~~-~~------- 112 (243)
..|++|+|+|+||+|+.+|..|+..|++|+++|..+ .++..+...|++. .+
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~ 214 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDI 214 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcC
Confidence 479999999999999999999999999999998532 3344556677642 11
Q ss_pred -HHhhhcCCcEEEEccCChh
Q 037949 113 -REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 113 -~~~~~~~aDvvi~a~G~~~ 131 (243)
.++...++|+||+++|...
T Consensus 215 ~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 215 TLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred CHHHHHhhCCEEEEeeCCCC
Confidence 1222346899999998754
No 234
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.95 E-value=3.4e-05 Score=67.63 Aligned_cols=37 Identities=30% Similarity=0.245 Sum_probs=32.6
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.||+++|+|+ ++||+++|+.|...|++|+++.+++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~ 46 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD 46 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch
Confidence 367899999998 4899999999999999999887653
No 235
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.95 E-value=8.1e-05 Score=67.35 Aligned_cols=97 Identities=24% Similarity=0.151 Sum_probs=70.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCCh-h
Q 037949 63 AGKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENA-D 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~-~ 131 (243)
..++++|+|+|.+|+..+..+. .++. +|.++++++++...... .|.++ .+.++.+.++|+|+.||++. +
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4579999999999999999997 4786 79999999887543221 24433 34677788999999998764 3
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDL 162 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l 162 (243)
.+.. +.+++|..++.+|... .++|.+.+
T Consensus 208 ~i~~---~~l~~g~~i~~vg~~~p~~rEld~~~l 238 (326)
T TIGR02992 208 ILHA---EWLEPGQHVTAMGSDAEHKNEIDPAVI 238 (326)
T ss_pred EecH---HHcCCCcEEEeeCCCCCCceecCHHHH
Confidence 4543 3478999999888652 45665544
No 236
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=97.95 E-value=5.9e-05 Score=66.21 Aligned_cols=91 Identities=20% Similarity=0.211 Sum_probs=71.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhh---h-cCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT----REDV---V-SEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~---~-~~aDvvi~a~G~~ 130 (243)
..+|++++|.|+ |.+|..+++.++.+|++|+++..++.+...+...|++ +.. ..+. . .+.|++++++|..
T Consensus 140 ~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~ 219 (320)
T cd08243 140 LQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA 219 (320)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChH
Confidence 357999999998 8999999999999999999988888877777666763 211 1111 1 3699999999874
Q ss_pred hcccHHHHccCCCCeEEEEecCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+. +.++.++++|+++.+|..
T Consensus 220 -~~~-~~~~~l~~~g~~v~~g~~ 240 (320)
T cd08243 220 -TLK-DSLRHLRPGGIVCMTGLL 240 (320)
T ss_pred -HHH-HHHHHhccCCEEEEEccC
Confidence 454 578999999999999864
No 237
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.94 E-value=5.2e-05 Score=67.30 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=74.6
Q ss_pred hhhhhhhhccccccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCc-ccC-----HHhhh----
Q 037949 50 LPDGLMRATDITIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIP-VLT-----REDVV---- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~-~~~-----~~~~~---- 117 (243)
.|+++.+... ..+|++|+|.| .|++|+.+++.++..|++|++++.++.+...+.. .|++ +++ ..+.+
T Consensus 133 a~~~l~~~~~-~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~ 211 (329)
T cd05288 133 AYFGLTEIGK-PKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA 211 (329)
T ss_pred HHHHHHhccC-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc
Confidence 3455433222 35789999999 5899999999999999999999988887766655 6653 222 11111
Q ss_pred -cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 -SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 -~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|++++|+|.. .++ ..++.++++|+++++|..+
T Consensus 212 ~~~~d~vi~~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 212 PDGIDVYFDNVGGE-ILD-AALTLLNKGGRIALCGAIS 247 (329)
T ss_pred cCCceEEEEcchHH-HHH-HHHHhcCCCceEEEEeecc
Confidence 3689999999874 454 4789999999999998653
No 238
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.94 E-value=3.3e-05 Score=62.73 Aligned_cols=86 Identities=20% Similarity=0.167 Sum_probs=56.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccHH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
.+.|++|+|+|+|.+|..-++.|...|++|++++.+. .......+ .... .+ ++.+.++|+|+.||+.+. ++..
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~~--~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e-~N~~ 86 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEI--CKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA-VNMM 86 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCcc--CHHHHhccCcEEEecccChhcCCCceEEEECCCCHH-HHHH
Confidence 4789999999999999999999999999999985432 22222222 1211 11 223678999999998766 3332
Q ss_pred HHccCCCCeEEEE
Q 037949 137 HMKQMKNAAIVCN 149 (243)
Q Consensus 137 ~l~~l~~g~~vvn 149 (243)
.....+....+++
T Consensus 87 i~~~a~~~~~vn~ 99 (157)
T PRK06719 87 VKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHCCcEEE
Confidence 2222344444444
No 239
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.94 E-value=2e-05 Score=69.53 Aligned_cols=43 Identities=28% Similarity=0.328 Sum_probs=38.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQA 103 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a 103 (243)
.++||+++|+|+. +||+++|..|...|++|++++++++++...
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~ 48 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEET 48 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4789999999999 899999999999999999999998876443
No 240
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=97.94 E-value=6.5e-05 Score=66.30 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=71.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|.+|+|.|+ |.+|+.+++.++++|++|+++..++.+...+...|++ +++ ..+ .. .+.|++++|+
T Consensus 136 ~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 215 (323)
T cd05282 136 LPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAV 215 (323)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECC
Confidence 357999999998 6999999999999999999888877777677666763 222 111 11 3689999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|+.... ..++.++++|+++.+|..+
T Consensus 216 g~~~~~--~~~~~l~~~g~~v~~g~~~ 240 (323)
T cd05282 216 GGESAT--RLARSLRPGGTLVNYGLLS 240 (323)
T ss_pred CCHHHH--HHHHhhCCCCEEEEEccCC
Confidence 986643 4688999999999988653
No 241
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=97.93 E-value=6e-05 Score=67.07 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=73.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCChh
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~~ 131 (243)
|++++|.|+ |.+|+.+++.++.+| ++|++++.++.+...+...|++ +++ ..+.+ .+.|++++++|...
T Consensus 150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 899999995 899999999999999 8999998888877677666753 221 11111 36899999998765
Q ss_pred cccHHHHccCCCCeEEEEecCCCCCCChhH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFDNEIDMLD 161 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~~~id~~~ 161 (243)
.+. ..++.++++|+++++|.....++...
T Consensus 230 ~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~ 258 (336)
T cd08252 230 HWD-AMAELIAPQGHICLIVDPQEPLDLGP 258 (336)
T ss_pred HHH-HHHHHhcCCCEEEEecCCCCcccchh
Confidence 565 57899999999999886533344443
No 242
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.92 E-value=7.3e-05 Score=66.73 Aligned_cols=88 Identities=14% Similarity=0.136 Sum_probs=67.0
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhh---hcCCcEEEEccCCh---hcccHHHH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDV---VSEAGLFVTTTENA---DIIMVRHM 138 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~---~~~aDvvi~a~G~~---~~i~~~~l 138 (243)
+|.|+|+|.+|..++..+...|.+|+++|+++.+.......|.. ..++.+. +..+|+|+.|+... .+++ +..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~-~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLE-ELA 80 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHH-HHH
Confidence 68999999999999999999999999999999987666666653 2344443 35689999987654 2332 345
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.++++.+-..
T Consensus 81 ~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTLEKGDIVIDGGNSY 96 (298)
T ss_pred hhCCCCCEEEECCCCC
Confidence 6678899999977653
No 243
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.92 E-value=6e-05 Score=71.95 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=59.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------------------cC-Cc-ccCHHhhhcCCcEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------------------EG-IP-VLTREDVVSEAGLF 123 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------------------~G-~~-~~~~~~~~~~aDvv 123 (243)
++|.|||+|.||..+|..+...|.+|+++|+++.+.+.... .| .. +.++.++++++|+|
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~V 84 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWI 84 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEE
Confidence 57999999999999999999999999999999887533210 12 22 23456778899999
Q ss_pred EEccCChhcccHHH---H-ccCCCCeEEEE
Q 037949 124 VTTTENADIIMVRH---M-KQMKNAAIVCN 149 (243)
Q Consensus 124 i~a~G~~~~i~~~~---l-~~l~~g~~vvn 149 (243)
++|......+.... + ..++++.++.+
T Consensus 85 ieavpe~~~vk~~l~~~l~~~~~~~~iI~S 114 (495)
T PRK07531 85 QESVPERLDLKRRVLAEIDAAARPDALIGS 114 (495)
T ss_pred EEcCcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 99976543222211 3 34566665554
No 244
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=97.92 E-value=5.1e-05 Score=68.08 Aligned_cols=92 Identities=20% Similarity=0.225 Sum_probs=72.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh------cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDVV------SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~------~~aDvvi~a~G 128 (243)
.+|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+ .+.|++++|.|
T Consensus 162 ~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 241 (341)
T PRK05396 162 LVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSG 241 (341)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCC
Confidence 479999999999999999999999999 688888888777666667764 222 11211 36999999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.+++.|..+
T Consensus 242 ~~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (341)
T PRK05396 242 APSAFR-QMLDNMNHGGRIAMLGIPP 266 (341)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 766665 4788899999999998754
No 245
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.91 E-value=6.5e-05 Score=65.57 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|++ +||+++|+.+...|++|+++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~ 42 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 42 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch
Confidence 578999999996 699999999999999999988873
No 246
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.91 E-value=3.7e-05 Score=69.56 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=36.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|++ +||+.+++.+...|++|+++++++.++.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~ 45 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ 45 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999995 9999999999999999999999887654
No 247
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.91 E-value=3e-05 Score=66.63 Aligned_cols=39 Identities=28% Similarity=0.308 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++||+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDAL 46 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 579999999985 999999999999999999999987654
No 248
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.91 E-value=2e-05 Score=70.68 Aligned_cols=39 Identities=28% Similarity=0.272 Sum_probs=33.1
Q ss_pred cccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|+ .+||+++|+.|...|++|++ .++..++
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 478999999999 68999999999999999988 4444443
No 249
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.91 E-value=5.7e-05 Score=69.19 Aligned_cols=89 Identities=25% Similarity=0.299 Sum_probs=63.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cCHHhhhcCCcEEEEccCChh---cccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LTREDVVSEAGLFVTTTENAD---IIMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~~~~~~~~aDvvi~a~G~~~---~i~~~ 136 (243)
++|.|+|.|.||..+|..++..|.+|.++++++.....+...+..+ .+..+.+.++|+||.|+.... ++. +
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~-~ 79 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLA-E 79 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHH-H
Confidence 4699999999999999999999998888888876544333333322 234566789999999986543 232 2
Q ss_pred HHc-cCCCCeEEEEecCCC
Q 037949 137 HMK-QMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~-~l~~g~~vvnvg~~~ 154 (243)
... .++++.+|.++|...
T Consensus 80 l~~~~l~~~~ivtDv~SvK 98 (359)
T PRK06545 80 LADLELKPGVIVTDVGSVK 98 (359)
T ss_pred HhhcCCCCCcEEEeCcccc
Confidence 222 367888888877654
No 250
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.90 E-value=0.00012 Score=65.71 Aligned_cols=99 Identities=14% Similarity=0.042 Sum_probs=72.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCChh-
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENAD- 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~~- 131 (243)
.-++++|+|+|..|+..++.+.. +.. +|.++++++.+.....+ .|.++ .+.++++.++|+|+.||++..
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P 195 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP 195 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc
Confidence 35899999999999988777765 455 79999999987543221 24432 357888999999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
++.. +++++|..|+.+|... .|+|...+..
T Consensus 196 ~~~~---~~l~pg~hV~aiGs~~p~~~El~~~~l~~ 228 (301)
T PRK06407 196 IFNR---KYLGDEYHVNLAGSNYPNRREAEHSVLND 228 (301)
T ss_pred EecH---HHcCCCceEEecCCCCCCcccCCHHHHHh
Confidence 4543 4678999999999764 5677655443
No 251
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.90 E-value=3.2e-05 Score=69.18 Aligned_cols=36 Identities=36% Similarity=0.469 Sum_probs=32.7
Q ss_pred cccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.||+++|+|+| +||+++|+.|...|++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999996 89999999999999999998754
No 252
>PRK08589 short chain dehydrogenase; Validated
Probab=97.89 E-value=5.1e-05 Score=66.21 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
++||+++|+|++ .||+.+++.+...|++|++++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 578999999986 89999999999999999999988
No 253
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.89 E-value=0.00014 Score=65.66 Aligned_cols=99 Identities=18% Similarity=0.129 Sum_probs=72.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCcc---cCHHhhhcCCcEEEEccCCh-hc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIPV---LTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~~---~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
.-++++|+|+|..++..++.+.. +.. +|.++++++++..... ..+.++ .+.++++.+||+|+.||++. ++
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P~ 206 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREPL 206 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCce
Confidence 35899999999999988887765 334 7999999998864322 124443 35678889999999998765 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~~ 164 (243)
+. .+.+++|..|+.+|... .|+|.+.+..
T Consensus 207 ~~---~~~l~~G~hi~~iGs~~p~~~Eld~~~l~~ 238 (315)
T PRK06823 207 LQ---AEDIQPGTHITAVGADSPGKQELDAELVAR 238 (315)
T ss_pred eC---HHHcCCCcEEEecCCCCcccccCCHHHHhh
Confidence 54 34679999999999763 5677665543
No 254
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.88 E-value=4.8e-05 Score=72.45 Aligned_cols=69 Identities=23% Similarity=0.279 Sum_probs=55.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC---HHhhhcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT---REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~---~~~~~~~aDvvi~a~G~~ 130 (243)
+.|++|+|+|+|++|+.+++.|+..|++|+++|.++.+...+...|+.... ..+.+.++|+|+.++|.+
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence 578999999999999999999999999999999877665444555765432 234467899999998864
No 255
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.88 E-value=6.8e-05 Score=67.52 Aligned_cols=97 Identities=24% Similarity=0.188 Sum_probs=59.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh---h-cCCc---ccCHHhhhcCCcEEEEccCChh---
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL---T-EGIP---VLTREDVVSEAGLFVTTTENAD--- 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~---~-~G~~---~~~~~~~~~~aDvvi~a~G~~~--- 131 (243)
-++++|+|+|..++..+..+.. ++. +|.++++++++.+... . .+.+ +.+.++++.++|+|+.||.+..
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 4799999999999988887765 666 8999999998754322 1 2443 2357888999999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
.++ -+.+++|..|+.+|... .|+|...+.
T Consensus 208 ~~~---~~~l~~g~hi~~iGs~~~~~~El~~~~~~ 239 (313)
T PF02423_consen 208 VFD---AEWLKPGTHINAIGSYTPGMRELDDELLK 239 (313)
T ss_dssp SB----GGGS-TT-EEEE-S-SSTTBESB-HHHHH
T ss_pred ccc---HHHcCCCcEEEEecCCCCchhhcCHHHhc
Confidence 454 35789999999999764 356655444
No 256
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.88 E-value=6.3e-05 Score=65.15 Aligned_cols=40 Identities=40% Similarity=0.457 Sum_probs=35.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|+ |.||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA 44 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899999998 49999999999999999999999876543
No 257
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.88 E-value=6.5e-05 Score=69.98 Aligned_cols=88 Identities=22% Similarity=0.216 Sum_probs=63.9
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-------------------cC-Ccc-cCHHhhhcCCcEEE
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-------------------EG-IPV-LTREDVVSEAGLFV 124 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-------------------~G-~~~-~~~~~~~~~aDvvi 124 (243)
+|.|+|.|.+|..+|..+...|.+|+++|+++.+...... .| ... .+..++++++|++|
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvi 81 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVII 81 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEE
Confidence 6899999999999999999999999999999887643221 12 221 23556678999999
Q ss_pred EccCChhc---------cc---HHHHccCCCCeEEEEecCC
Q 037949 125 TTTENADI---------IM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 125 ~a~G~~~~---------i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
.|++++.. +. ......++++.++++.+..
T Consensus 82 i~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 82 ICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 99886531 21 1234556888888887643
No 258
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.88 E-value=0.00012 Score=64.90 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=55.8
Q ss_pred hhhhhhhhccc-cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cCC--c--ccC----HHhhhc
Q 037949 50 LPDGLMRATDI-TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EGI--P--VLT----REDVVS 118 (243)
Q Consensus 50 ~~~av~~~~~~-~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G~--~--~~~----~~~~~~ 118 (243)
++.++++.... .+.+++|+|+|+|+.+++++..|...|+ +|+++++++++.+.... .+. . ... ..+.+.
T Consensus 110 ~~~~l~~~~~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~ 189 (282)
T TIGR01809 110 IAGALANIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEK 189 (282)
T ss_pred HHHHHHhhCCccccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhccc
Confidence 44555442211 3578999999999999999999999998 79999999887543322 111 1 111 123346
Q ss_pred CCcEEEEccCCh
Q 037949 119 EAGLFVTTTENA 130 (243)
Q Consensus 119 ~aDvvi~a~G~~ 130 (243)
++|+||+||+..
T Consensus 190 ~~DiVInaTp~g 201 (282)
T TIGR01809 190 AAEVLVSTVPAD 201 (282)
T ss_pred CCCEEEECCCCC
Confidence 799999998653
No 259
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.87 E-value=0.00013 Score=64.47 Aligned_cols=96 Identities=17% Similarity=0.228 Sum_probs=68.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCChhccc---H
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA----RVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENADIIM---V 135 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~ 135 (243)
.++++||+|.+|..++..+...|. +|+++|+++.+++.+.+ .|... .+..+.++++|+||.|+... .+. .
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~-~~~~vl~ 81 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPD-LYSSVIN 81 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChH-HHHHHHH
Confidence 479999999999999999998884 69999999888765554 67653 34566778999999997642 222 1
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+.-..++++.+++.+--+ ++.+.+..
T Consensus 82 ~l~~~~~~~~lvISi~AG---i~i~~l~~ 107 (272)
T PRK12491 82 QIKDQIKNDVIVVTIAAG---KSIKSTEN 107 (272)
T ss_pred HHHHhhcCCcEEEEeCCC---CcHHHHHH
Confidence 122334567788876554 55566654
No 260
>PLN02858 fructose-bisphosphate aldolase
Probab=97.87 E-value=6.5e-05 Score=79.45 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=74.4
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccH------
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIMV------ 135 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~------ 135 (243)
..++|.+||.|.+|..+|..|...|.+|.++|+++.+.......|+. +.++.++.+++|+||.|..+...+..
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~ 82 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDE 82 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchh
Confidence 46789999999999999999999999999999999988776777875 44678888899999999876544331
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
..+..+++|.++++.+...
T Consensus 83 g~~~~l~~g~iivd~STi~ 101 (1378)
T PLN02858 83 GAAKGLQKGAVILIRSTIL 101 (1378)
T ss_pred hHHhcCCCcCEEEECCCCC
Confidence 1345678899999987653
No 261
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.87 E-value=3.9e-05 Score=68.75 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=51.4
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-----------hcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-----------TEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-----------~~G~-------------~-~~~~~~~~~~ 119 (243)
++|+|+|+|.+|..+|..+...|.+|+++|+++.....+. ..|. . +.++.+++++
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ 82 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVAD 82 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCC
Confidence 4799999999999999999999999999999987654422 2332 1 2345667789
Q ss_pred CcEEEEccCCh
Q 037949 120 AGLFVTTTENA 130 (243)
Q Consensus 120 aDvvi~a~G~~ 130 (243)
+|+|++|+...
T Consensus 83 ad~Vi~avpe~ 93 (308)
T PRK06129 83 ADYVQESAPEN 93 (308)
T ss_pred CCEEEECCcCC
Confidence 99999997643
No 262
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.87 E-value=0.0001 Score=64.86 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=63.9
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-c---CC-cccCHHhh-hcCCcEEEEccCCh--hcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-E---GI-PVLTREDV-VSEAGLFVTTTENA--DII 133 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~---G~-~~~~~~~~-~~~aDvvi~a~G~~--~~i 133 (243)
.++++++|+|+|++|+.++..+...|++|+++++++.+.....+ . +. ...+..+. ..++|+||+|++.. +.+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~ 194 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNI 194 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCC
Confidence 46899999999999999999999999999999999876533221 1 21 22233332 35799999998652 111
Q ss_pred cH--HHHccCCCCeEEEEecCCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~~ 154 (243)
.. -..+.++++.+++++...+
T Consensus 195 ~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 195 DEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred CCCCCCHHHcCCCCEEEEeccCC
Confidence 10 0134568888898886654
No 263
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=97.86 E-value=8.5e-05 Score=66.49 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=75.9
Q ss_pred hhhhhhhccccccCcEEEEEcCCh-HHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGD-VGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~-IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
|+++... . ..+|++++|.|+++ +|+.+++.++++|++|+++..++.+...+...|++ +++ ..+ ..
T Consensus 155 ~~~~~~~-~-~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 232 (341)
T cd08297 155 YKALKKA-G-LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGG 232 (341)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcC
Confidence 4555433 2 35799999999985 99999999999999999999998887666666753 221 111 11
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.|+++++.+....++ ..++.++++|+++..|..+
T Consensus 233 ~~vd~vl~~~~~~~~~~-~~~~~l~~~g~~v~~g~~~ 268 (341)
T cd08297 233 GGAHAVVVTAVSAAAYE-QALDYLRPGGTLVCVGLPP 268 (341)
T ss_pred CCCCEEEEcCCchHHHH-HHHHHhhcCCEEEEecCCC
Confidence 36899999877766665 5789999999999998653
No 264
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=97.86 E-value=0.00012 Score=64.99 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=69.1
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH---h----hhcCCc
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE---D----VVSEAG 121 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~---~----~~~~aD 121 (243)
|+++.+. . ..+|++++|.|+ |++|+.+++.++++|++|++++.+ ..+...|++ +++.. + ...+.|
T Consensus 152 ~~~l~~~-~-~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~----~~~~~~g~~~~~~~~~~~~~l~~~~~~~d 225 (325)
T cd08264 152 YHALKTA-G-LGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDEVEEKVKEITKMAD 225 (325)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeHH----HHHHHhCCCeeecchHHHHHHHHHhCCCC
Confidence 4555432 2 457999999998 999999999999999999887632 334445653 22211 1 125689
Q ss_pred EEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 122 LFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 122 vvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++++++|.. .+. +.++.++++|.++.+|..
T Consensus 226 ~vl~~~g~~-~~~-~~~~~l~~~g~~v~~g~~ 255 (325)
T cd08264 226 VVINSLGSS-FWD-LSLSVLGRGGRLVTFGTL 255 (325)
T ss_pred EEEECCCHH-HHH-HHHHhhccCCEEEEEecC
Confidence 999999874 454 579999999999998853
No 265
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.86 E-value=9.7e-05 Score=69.51 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=66.5
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhH-HHHhhcCCccc-CHHhhhcCCcEEEEccCChh---cccHHHHc
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICA-LQALTEGIPVL-TREDVVSEAGLFVTTTENAD---IIMVRHMK 139 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~-~~a~~~G~~~~-~~~~~~~~aDvvi~a~G~~~---~i~~~~l~ 139 (243)
+++|+| +|.||..+|..++..|.+|+++|+++.+. ..+...|.... +..+.+.++|+|+.|+.... ++. +...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~-~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIK-EVAP 80 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHH-HHHh
Confidence 689997 79999999999999999999999998764 33445566433 45667789999999976533 232 3345
Q ss_pred cCCCCeEEEEecCC
Q 037949 140 QMKNAAIVCNIGHF 153 (243)
Q Consensus 140 ~l~~g~~vvnvg~~ 153 (243)
.++++.++++++..
T Consensus 81 ~l~~~~iViDvsSv 94 (437)
T PRK08655 81 HVKEGSLLMDVTSV 94 (437)
T ss_pred hCCCCCEEEEcccc
Confidence 67889999998864
No 266
>PRK06398 aldose dehydrogenase; Validated
Probab=97.85 E-value=4.1e-05 Score=66.25 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.||+++|+|+. .||+.+|+.+...|++|+++++++.
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 578999999976 9999999999999999999988764
No 267
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.85 E-value=6.4e-05 Score=65.31 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=31.6
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++||+++|+|+ ++||+++|+.+...|++|+++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~ 42 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD 42 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH
Confidence 57899999995 4899999999999999999886653
No 268
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.85 E-value=0.00011 Score=65.74 Aligned_cols=66 Identities=21% Similarity=0.181 Sum_probs=51.1
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----cCC--------------c-ccCHHhhhcCCcEEE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----EGI--------------P-VLTREDVVSEAGLFV 124 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----~G~--------------~-~~~~~~~~~~aDvvi 124 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+.. .+. . ..+..+.++++|+|+
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi 84 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVI 84 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEE
Confidence 67999999999999999999999999999999877644432 121 1 123456678999999
Q ss_pred EccCCh
Q 037949 125 TTTENA 130 (243)
Q Consensus 125 ~a~G~~ 130 (243)
+|+...
T Consensus 85 ~av~~~ 90 (311)
T PRK06130 85 EAVPEK 90 (311)
T ss_pred EeccCc
Confidence 997553
No 269
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.85 E-value=6.1e-05 Score=66.44 Aligned_cols=36 Identities=36% Similarity=0.658 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|++++|+|++ .||+.+|+.+...|++|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 578999999987 999999999999999999988764
No 270
>PLN02712 arogenate dehydrogenase
Probab=97.84 E-value=8.8e-05 Score=73.23 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=66.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhh-cCCcEEEEccCChh---cccHHHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVV-SEAGLFVTTTENAD---IIMVRHM 138 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~-~~aDvvi~a~G~~~---~i~~~~l 138 (243)
-.+++|||+|.||..+|..++..|.+|+++|+++.+ ..+...|+.. .+..+.+ .++|+|+.|+.... ++..-.+
T Consensus 52 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l~~ 130 (667)
T PLN02712 52 QLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSLPL 130 (667)
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhhhh
Confidence 368999999999999999999999999999998654 3566667643 3456644 46999999986432 2322112
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++.+|++++...
T Consensus 131 ~~l~~g~iVvDv~SvK 146 (667)
T PLN02712 131 QRLKRNTLFVDVLSVK 146 (667)
T ss_pred hcCCCCeEEEECCCCc
Confidence 4578899999997544
No 271
>PRK06046 alanine dehydrogenase; Validated
Probab=97.84 E-value=0.00015 Score=65.65 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=69.5
Q ss_pred CcEEEEEcCChHHHHHHHHHH-hCCC-EEEEEeCCchhHHHHhh-----cCCc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 64 GKIAVDCGHGDVGRGCAAALK-AVGA-RVMGTEIDLICALQALT-----EGIP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~-~~Ga-~V~v~d~~~~r~~~a~~-----~G~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
-++++|+|+|.+|+..+..+. ..+. +|.++|+++.+.....+ .+.. +.+.++++. +|+|+.||++. ++
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P~ 207 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKPV 207 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCcE
Confidence 479999999999999998887 4566 68889999887644332 1432 234667776 99999998765 44
Q ss_pred ccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
+.. +.+++|..|+.+|... .|+|...+.
T Consensus 208 ~~~---~~l~~g~hV~~iGs~~p~~~El~~~~~~ 238 (326)
T PRK06046 208 VKA---EWIKEGTHINAIGADAPGKQELDPEILL 238 (326)
T ss_pred ecH---HHcCCCCEEEecCCCCCccccCCHHHHh
Confidence 543 4569999999999763 467755443
No 272
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.84 E-value=0.00012 Score=63.26 Aligned_cols=40 Identities=30% Similarity=0.357 Sum_probs=35.9
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA 44 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999877653
No 273
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.84 E-value=0.00012 Score=65.52 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=61.6
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--------------Cc-ccCHHhhhcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--------------IP-VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--------------~~-~~~~~~~~~~aDvvi~a~G~~ 130 (243)
+|+|+|+|.+|..++..+...|.+|.++|+++.+.+.....+ .. ..+.++.+.++|+|+.|+...
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~ 82 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPSQ 82 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCHH
Confidence 699999999999999999999999999999987765444432 22 123455677899999998664
Q ss_pred hc---ccHHHHccCCCCeEEEEec
Q 037949 131 DI---IMVRHMKQMKNAAIVCNIG 151 (243)
Q Consensus 131 ~~---i~~~~l~~l~~g~~vvnvg 151 (243)
.. +. .....++++.+++++.
T Consensus 83 ~~~~v~~-~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 83 ALREVLK-QLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHH-HHHhhcCCCCEEEEEe
Confidence 32 21 2234456777888763
No 274
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.83 E-value=7.7e-05 Score=66.29 Aligned_cols=98 Identities=19% Similarity=0.176 Sum_probs=65.5
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-cC-----Cccc---CHHhhhcCCcEEEEccCC-
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-EG-----IPVL---TREDVVSEAGLFVTTTEN- 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~G-----~~~~---~~~~~~~~aDvvi~a~G~- 129 (243)
...+++|+|+|+|+.|++++..|...|+ +|+++|+++.+.+.... .+ ..+. +..+.+.++|+||+||..
T Consensus 124 ~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~G 203 (284)
T PRK12549 124 DASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTG 203 (284)
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCC
Confidence 3678999999999999999999999998 89999999887643322 11 1111 223456789999999632
Q ss_pred -hh----cccHHHHccCCCCeEEEEecCCCCCCChhHHH
Q 037949 130 -AD----IIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLE 163 (243)
Q Consensus 130 -~~----~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~ 163 (243)
.+ .++ .+.++++..+.++-..+ .+.+.+.
T Consensus 204 m~~~~~~~~~---~~~l~~~~~v~DivY~P--~~T~ll~ 237 (284)
T PRK12549 204 MAKHPGLPLP---AELLRPGLWVADIVYFP--LETELLR 237 (284)
T ss_pred CCCCCCCCCC---HHHcCCCcEEEEeeeCC--CCCHHHH
Confidence 11 122 23466777777765543 3444443
No 275
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.83 E-value=0.00014 Score=62.14 Aligned_cols=91 Identities=21% Similarity=0.248 Sum_probs=61.6
Q ss_pred ccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCc----------hhHHHHhhcC-Ccc------cCHHhhh-cCC
Q 037949 60 ITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDL----------ICALQALTEG-IPV------LTREDVV-SEA 120 (243)
Q Consensus 60 ~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~----------~r~~~a~~~G-~~~------~~~~~~~-~~a 120 (243)
..+.|++|+|.|+|.+|+.+|+.|...|+ .|.++|.+. ..+......+ ... .+.++.+ .++
T Consensus 19 ~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (217)
T cd05211 19 DSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLDV 98 (217)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccceeccc
Confidence 35789999999999999999999999999 467789988 6544333332 111 1112222 379
Q ss_pred cEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|+++.|+.. ..++.+....+ .+.+|.-|..
T Consensus 99 DVlipaA~~-~~i~~~~a~~l--~a~~V~e~AN 128 (217)
T cd05211 99 DIFAPCALG-NVIDLENAKKL--KAKVVAEGAN 128 (217)
T ss_pred cEEeecccc-CccChhhHhhc--CccEEEeCCC
Confidence 999999754 35666556655 4666654443
No 276
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.83 E-value=2.5e-05 Score=70.38 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=36.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
..|++++|+|++ +||+.+|+.+...|++|+++++++++++.
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~ 92 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD 92 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHH
Confidence 368999999986 89999999999999999999999887643
No 277
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.83 E-value=6.3e-05 Score=68.03 Aligned_cols=40 Identities=28% Similarity=0.241 Sum_probs=35.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~ 46 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLE 46 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 578999999985 9999999999999999999999877653
No 278
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.82 E-value=3.1e-05 Score=63.85 Aligned_cols=42 Identities=26% Similarity=0.435 Sum_probs=38.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+.|+.|+|+|+| +||+.+.+.|...|++|+.+-++++.+..
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~s 46 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLS 46 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHH
Confidence 4789999999999 89999999999999999999999887644
No 279
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=97.82 E-value=9.4e-05 Score=67.24 Aligned_cols=91 Identities=14% Similarity=0.202 Sum_probs=70.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~G 128 (243)
.+|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +++ ..+ .. .+.|++++++|
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg 265 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCC
Confidence 5789999999999999999999999997 88888888877666666653 222 111 11 35899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
....+. +.++.++++|+++..|..
T Consensus 266 ~~~~~~-~~~~~l~~~G~~v~~g~~ 289 (367)
T cd08263 266 KPETFK-LALDVVRDGGRAVVVGLA 289 (367)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEccC
Confidence 764454 578999999999998854
No 280
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.0001 Score=64.11 Aligned_cols=40 Identities=35% Similarity=0.439 Sum_probs=35.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.|++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~ 43 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK 43 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 568999999985 8999999999999999999999887653
No 281
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.80 E-value=5.8e-05 Score=64.81 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~ 44 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD 44 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999877653
No 282
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=97.80 E-value=0.00012 Score=64.62 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=71.5
Q ss_pred ccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEccC
Q 037949 62 IAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~G 128 (243)
.+|++++|.| .|.+|..+++.++.+|++|++++.++.+...+...|.+ +++ ..+. . ++.|++++++|
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 5789999999 58999999999999999999999888887666666653 221 1111 1 35899999998
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+.. ...++.++++|+++.+|..+
T Consensus 221 ~~~~--~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 221 GAIG--RAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred hHhH--HHHHHHhccCcEEEEEecCC
Confidence 8753 35799999999999998753
No 283
>PLN02858 fructose-bisphosphate aldolase
Probab=97.80 E-value=0.00011 Score=77.87 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=73.1
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHHhhhcCCcEEEEccCChhccc------H
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTREDVVSEAGLFVTTTENADIIM------V 135 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~------~ 135 (243)
..++|.+||.|.+|..+|..|...|.+|+++|+++.+.......|.. +.++.++++.+|+|+.|..++..+. .
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 34789999999999999999999999999999999887665666654 4467788889999999987654322 1
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
..+..+++|.++++.+...
T Consensus 403 g~~~~l~~g~ivVd~STvs 421 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTVS 421 (1378)
T ss_pred hHHhcCCCCCEEEECCCCC
Confidence 2356678899999987653
No 284
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.80 E-value=7.8e-05 Score=64.02 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=34.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++..
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 3679999999986 89999999999999999999988653
No 285
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.79 E-value=0.00012 Score=64.67 Aligned_cols=83 Identities=19% Similarity=0.236 Sum_probs=58.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHH-----------hhcCC-------------c-ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQA-----------LTEGI-------------P-VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a-----------~~~G~-------------~-~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|+++.+++.+ .+.|. . ..+. +.+.+
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 82 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDL-DDLKD 82 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhcc
Confidence 579999999999999999999999999999999876432 22331 1 1122 34678
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
+|+|++|+... .++. +.-..++++.+++.
T Consensus 83 aDlVi~av~e~~~~k~~~~~-~l~~~~~~~~il~s 116 (282)
T PRK05808 83 ADLVIEAATENMDLKKKIFA-QLDEIAKPEAILAT 116 (282)
T ss_pred CCeeeecccccHHHHHHHHH-HHHhhCCCCcEEEE
Confidence 99999997431 2232 23345677887753
No 286
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=97.79 E-value=0.00011 Score=65.19 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=71.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.| .|.+|+.+++.++.+|++|+.++.++.+...+...|++ +++ ..+. . .+.|++++|+
T Consensus 138 ~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 217 (327)
T PRK10754 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSV 217 (327)
T ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECC
Confidence 35799999996 68999999999999999999998888887777667753 221 1111 1 2589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... +. +.++.++++|+++.+|...
T Consensus 218 ~~~~-~~-~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 218 GKDT-WE-ASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred cHHH-HH-HHHHHhccCCEEEEEccCC
Confidence 8743 43 4789999999999998653
No 287
>PRK06182 short chain dehydrogenase; Validated
Probab=97.79 E-value=0.00011 Score=63.91 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=34.7
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++++|+|+ |.||+.+++.+...|++|+++++++.++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~ 41 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME 41 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4789999997 59999999999999999999999887653
No 288
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.78 E-value=8.9e-05 Score=66.35 Aligned_cols=42 Identities=31% Similarity=0.313 Sum_probs=37.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++|++++|+|++ +||+.+|+.|...|++|+++.+++.+...
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~ 53 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEA 53 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4689999999987 89999999999999999999998876543
No 289
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.78 E-value=3.5e-05 Score=66.96 Aligned_cols=35 Identities=31% Similarity=0.313 Sum_probs=30.8
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCC
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
++||+++|+|+ ++||+++|+.+...|++|+++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 57899999995 489999999999999999987643
No 290
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.78 E-value=0.00014 Score=67.45 Aligned_cols=88 Identities=13% Similarity=0.127 Sum_probs=61.1
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh----------------cCCcc---cCHHhhhcCCcEEEEc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT----------------EGIPV---LTREDVVSEAGLFVTT 126 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~----------------~G~~~---~~~~~~~~~aDvvi~a 126 (243)
+|.|+|.|-+|+.+|..++ .|.+|+++|+++.+.+.... .+... .+..+++.++|+++.|
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~ 80 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA 80 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEe
Confidence 5899999999999998776 59999999999998754432 11111 1234556789999999
Q ss_pred cCCh----------hcccH--HHHccCCCCeEEEEecCCC
Q 037949 127 TENA----------DIIMV--RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~----------~~i~~--~~l~~l~~g~~vvnvg~~~ 154 (243)
++++ ..+.. +.+..++++.+||+-+..+
T Consensus 81 Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~ 120 (388)
T PRK15057 81 TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP 120 (388)
T ss_pred CCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence 8765 11111 1233368888888776543
No 291
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=97.78 E-value=0.00012 Score=65.41 Aligned_cols=93 Identities=15% Similarity=0.246 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+. . .+.|++++++
T Consensus 165 ~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~ 244 (347)
T cd05278 165 IKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAV 244 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEcc
Confidence 3579999999999999999999999997 888888888776666666653 222 1121 1 3589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. +.++.++++|+++..|...
T Consensus 245 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 270 (347)
T cd05278 245 GFEETFE-QAVKVVRPGGTIANVGVYG 270 (347)
T ss_pred CCHHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 8755554 5789999999999998653
No 292
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.0001 Score=63.21 Aligned_cols=39 Identities=28% Similarity=0.325 Sum_probs=35.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|++ .||+.+|+.+...|++|+++++++...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~ 42 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL 42 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578999999986 999999999999999999999987654
No 293
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=97.77 E-value=0.00021 Score=63.87 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=69.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc----hhHHHHhhcCCc-ccC--------HHhh
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL----ICALQALTEGIP-VLT--------REDV 116 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~----~r~~~a~~~G~~-~~~--------~~~~ 116 (243)
++++.+... ..+|++|+|.|+ |++|+.+++.++..|++|+++..++ ++...+...|++ +++ ..+.
T Consensus 135 ~~~l~~~~~-~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (341)
T cd08290 135 YRLLEDFVK-LQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATEL 213 (341)
T ss_pred HHHHHhhcc-cCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHH
Confidence 445433222 357999999997 8999999999999999987765443 444555556763 221 1111
Q ss_pred h----c-CCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 117 V----S-EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 117 ~----~-~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+ . +.|++++|+|..... +.++.++++|+++.+|..
T Consensus 214 i~~~~~~~~d~vld~~g~~~~~--~~~~~l~~~G~~v~~g~~ 253 (341)
T cd08290 214 LKSAPGGRPKLALNCVGGKSAT--ELARLLSPGGTMVTYGGM 253 (341)
T ss_pred HHHHcCCCceEEEECcCcHhHH--HHHHHhCCCCEEEEEecc
Confidence 1 1 489999999986533 468889999999999854
No 294
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=97.76 E-value=0.00015 Score=64.94 Aligned_cols=101 Identities=21% Similarity=0.212 Sum_probs=73.7
Q ss_pred hhhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh---hh--
Q 037949 50 LPDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED---VV-- 117 (243)
Q Consensus 50 ~~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~---~~-- 117 (243)
.|+++... . ..+|++++|.|.|.+|..+++.++.+|++ |++++.++.+.......|.. +++ ..+ ..
T Consensus 148 a~~~l~~~-~-~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T cd08236 148 ALHAVRLA-G-ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEG 225 (343)
T ss_pred HHHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCC
Confidence 34555432 2 35789999999999999999999999997 99998877766555555642 221 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|....+. ..++.++++|+++.+|..
T Consensus 226 ~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 260 (343)
T cd08236 226 RGADLVIEAAGSPATIE-QALALARPGGKVVLVGIP 260 (343)
T ss_pred CCCCEEEECCCCHHHHH-HHHHHhhcCCEEEEEccc
Confidence 24899999988765554 578999999999999855
No 295
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=97.76 E-value=0.00019 Score=63.48 Aligned_cols=91 Identities=10% Similarity=0.006 Sum_probs=69.6
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhh----h--cCCcEEEEc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDV----V--SEAGLFVTT 126 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~----~--~~aDvvi~a 126 (243)
..+|++++|.| .|.+|+.+++.++..|++++++..++.+...+...|.+ +++ ..+. . .+.|+++++
T Consensus 138 ~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 138 VKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 35789999999 47999999999999999988888888887777666763 221 1111 1 358999999
Q ss_pred cCChhcccHHHHccCCCCeEEEEecCC
Q 037949 127 TENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+|.. .+. ..+..++++|.++++|..
T Consensus 218 ~~~~-~~~-~~~~~l~~~g~~i~~~~~ 242 (334)
T PTZ00354 218 VGGS-YLS-ETAEVLAVDGKWIVYGFM 242 (334)
T ss_pred CchH-HHH-HHHHHhccCCeEEEEecC
Confidence 8754 343 478889999999998854
No 296
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.76 E-value=0.00023 Score=63.19 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=73.7
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----c
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----S 118 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~ 118 (243)
|+++.+... ..+|++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+ .
T Consensus 128 ~~~l~~~~~-~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 206 (329)
T cd08250 128 SIALEEVGE-MKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPK 206 (329)
T ss_pred HHHHHHhcC-CCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCC
Confidence 455443222 457999999995 7999999999999999999988888777666666653 221 11111 3
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+.|++++++|.. .+. ..++.++++|+++++|..
T Consensus 207 ~vd~v~~~~g~~-~~~-~~~~~l~~~g~~v~~g~~ 239 (329)
T cd08250 207 GVDVVYESVGGE-MFD-TCVDNLALKGRLIVIGFI 239 (329)
T ss_pred CCeEEEECCcHH-HHH-HHHHHhccCCeEEEEecc
Confidence 589999999864 343 578999999999999864
No 297
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00014 Score=62.71 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=35.9
Q ss_pred cccCcEEEEEcC-C-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGH-G-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~-G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|+ | +||+.+++.+...|++|+++++++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~ 56 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG 56 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 357899999997 6 7999999999999999999998876553
No 298
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=97.75 E-value=0.00014 Score=72.46 Aligned_cols=89 Identities=21% Similarity=0.224 Sum_probs=66.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC--CEEEEEeCCchhHHHHhhcCCc---ccCHHhhhcCCcEEEEccCChhc---ccHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG--ARVMGTEIDLICALQALTEGIP---VLTREDVVSEAGLFVTTTENADI---IMVR 136 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G--a~V~v~d~~~~r~~~a~~~G~~---~~~~~~~~~~aDvvi~a~G~~~~---i~~~ 136 (243)
++++|+|+|.||..+++.++..| .+|+++|+++.++..+...|+. ..+..+.+.++|+|+.|++.... +. +
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~-~ 82 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLA-D 82 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHH-H
Confidence 78999999999999999999999 4899999999887777777753 23456667899999999875432 21 2
Q ss_pred HHccCCCCeEEEEecCCC
Q 037949 137 HMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~~~ 154 (243)
.-..++++.++++++...
T Consensus 83 l~~~~~~~~ii~d~~svk 100 (735)
T PRK14806 83 LKPLLSEHAIVTDVGSTK 100 (735)
T ss_pred HHHhcCCCcEEEEcCCCc
Confidence 223456777887777543
No 299
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.75 E-value=3e-05 Score=66.53 Aligned_cols=34 Identities=32% Similarity=0.349 Sum_probs=30.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
+.||+++|+|++ .||+.+++.+...|++|++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 468999999977 8999999999999999988753
No 300
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=97.75 E-value=0.00025 Score=61.72 Aligned_cols=92 Identities=17% Similarity=0.184 Sum_probs=71.5
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.| .|++|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++|+
T Consensus 134 ~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 134 VKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence 35799999999 58999999999999999999998888887777666753 221 111 11 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .++ ..++.++++|+++.+|..+
T Consensus 214 ~~~-~~~-~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 214 GKD-TFE-GSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred CcH-hHH-HHHHhhccCcEEEEEecCC
Confidence 874 444 5789999999999998654
No 301
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00029 Score=61.96 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=70.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCchhHH-HHhhcCCc-ccCHHhhhcCCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLICAL-QALTEGIP-VLTREDVVSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~r~~-~a~~~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.++.+||+|.+|.+++.-+...| .+|++++++++++. .+...|.. +.+..+....+|+||.|+- |..+. +.+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavK-Pq~~~-~vl 79 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVK-PQDLE-EVL 79 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeC-hHhHH-HHH
Confidence 47999999999999999999999 48999999998874 55566665 3445677788999999963 33332 456
Q ss_pred ccCC---CCeEEEEecCCCCCCChhHHHHh
Q 037949 139 KQMK---NAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 139 ~~l~---~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
..++ ++.+|+++.-+ +....+..+
T Consensus 80 ~~l~~~~~~~lvISiaAG---v~~~~l~~~ 106 (266)
T COG0345 80 SKLKPLTKDKLVISIAAG---VSIETLERL 106 (266)
T ss_pred HHhhcccCCCEEEEEeCC---CCHHHHHHH
Confidence 6665 57788876654 455555543
No 302
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.75 E-value=0.00018 Score=67.27 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=63.2
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC-ccc--CHHhh---------------hcCCcEEEEc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI-PVL--TREDV---------------VSEAGLFVTT 126 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~-~~~--~~~~~---------------~~~aDvvi~a 126 (243)
++|.|+|.|.+|..+|..|+..|.+|+++|+++.+.+. ...|. +.. .+++. .+++|++|.|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~-l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDT-INRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH-HHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 67999999999999999999999999999999998653 33332 111 11111 2379999999
Q ss_pred cCCh---------hccc---HHHHccCCCCeEEEEecCC
Q 037949 127 TENA---------DIIM---VRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 127 ~G~~---------~~i~---~~~l~~l~~g~~vvnvg~~ 153 (243)
++++ ..+. ......+++|.+|+..+..
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv 121 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTS 121 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 8875 2221 1234567889999887654
No 303
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.74 E-value=0.00013 Score=69.49 Aligned_cols=90 Identities=11% Similarity=-0.008 Sum_probs=68.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc----ccCHHhhhcC---CcEEEEccCChhcc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP----VLTREDVVSE---AGLFVTTTENADII 133 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~----~~~~~~~~~~---aDvvi~a~G~~~~i 133 (243)
.+|.+||.|.+|..+|+.+...|.+|+|+|+++.+.+..... |.. ..++.+++.. +|+|+.|..+...+
T Consensus 7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 369999999999999999999999999999999886544332 532 2356676654 99999997654433
Q ss_pred c---HHHHccCCCCeEEEEecCCC
Q 037949 134 M---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 134 ~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
+ ...+..+++|.++|+.|-..
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 23567788999999987653
No 304
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=97.74 E-value=0.00019 Score=63.93 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=72.5
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC---HHhhh---cCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT---REDVV---SEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~---~~~~~---~~aDv 122 (243)
++++.+. . ..++++++|.|+ |.+|+.+++.++..|++|++++.++++...+... ++ +.+ ..+.+ .+.|+
T Consensus 152 ~~~~~~~-~-~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~d~ 228 (334)
T PRK13771 152 YRGLRRA-G-VKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKIGGADI 228 (334)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhcCCCcE
Confidence 4555433 2 357999999999 7999999999999999999998888776555433 21 111 11111 25899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++|+|... +. +.++.++++|+++..|...
T Consensus 229 ~ld~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 258 (334)
T PRK13771 229 VIETVGTPT-LE-ESLRSLNMGGKIIQIGNVD 258 (334)
T ss_pred EEEcCChHH-HH-HHHHHHhcCCEEEEEeccC
Confidence 999998754 43 5789999999999998753
No 305
>PRK14031 glutamate dehydrogenase; Provisional
Probab=97.73 E-value=0.0002 Score=67.28 Aligned_cols=93 Identities=15% Similarity=0.220 Sum_probs=60.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEE-Ee----------CCchhHH---HHhh------------cCCcccC
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMG-TE----------IDLICAL---QALT------------EGIPVLT 112 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v-~d----------~~~~r~~---~a~~------------~G~~~~~ 112 (243)
+..+.|++|+|.|+|++|...|+.|..+|++|++ +| ++...+. .... .++..++
T Consensus 223 g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD~~G~iy~~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~ga~~i~ 302 (444)
T PRK14031 223 GTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYGCKYVE 302 (444)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHHHhhcCCchhhhHhhcCCEEcC
Confidence 4468999999999999999999999999999876 77 5554331 0000 0222223
Q ss_pred HHhhh-cCCcEEEEccCChhcccHHHHccCCC-CeEEEEecC
Q 037949 113 REDVV-SEAGLFVTTTENADIIMVRHMKQMKN-AAIVCNIGH 152 (243)
Q Consensus 113 ~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l~~-g~~vvnvg~ 152 (243)
.++.+ ..|||++.|.- ...|+.+..+.++. ++.+|.-|-
T Consensus 303 ~d~~~~~~cDIliPaAl-~n~I~~~na~~l~a~g~~~V~EgA 343 (444)
T PRK14031 303 GARPWGEKGDIALPSAT-QNELNGDDARQLVANGVIAVSEGA 343 (444)
T ss_pred CcccccCCCcEEeeccc-ccccCHHHHHHHHhcCCeEEECCC
Confidence 33332 47999999853 35566666666644 444454343
No 306
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.73 E-value=3.5e-05 Score=68.70 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=33.7
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.+.|++++|+|++ .||+.+|+.|...|++|++.|+++
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~ 46 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS 46 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc
Confidence 5789999999987 899999999999999999998754
No 307
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=97.72 E-value=0.00018 Score=64.35 Aligned_cols=93 Identities=23% Similarity=0.244 Sum_probs=71.1
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~G 128 (243)
..+|++++|.|+|.+|..+++.++.+|++|+++..++++.......|.+ +++ ..+. . .+.|+++++.|
T Consensus 157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g 236 (337)
T cd08261 157 VTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATG 236 (337)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCC
Confidence 3579999999999999999999999999999988887776555555643 221 1121 1 24899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
....+. ..++.++++|.++..|..+
T Consensus 237 ~~~~~~-~~~~~l~~~G~~i~~g~~~ 261 (337)
T cd08261 237 NPASME-EAVELVAHGGRVVLVGLSK 261 (337)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEcCCC
Confidence 765554 4788899999999988654
No 308
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.71 E-value=0.00015 Score=64.65 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=80.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhc-CC-cEEEEccCCh---hcccH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVS-EA-GLFVTTTENA---DIIMV 135 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~-~a-Dvvi~a~G~~---~~i~~ 135 (243)
..|+=++|+|++ +||++-|.-|+.+|.+|+++-+++++++.-.++ .++.-+ +. -+++|++... +.+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kE------I~~~~~vev~~i~~Dft~~~~~ye~i~- 119 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKE------IEEKYKVEVRIIAIDFTKGDEVYEKLL- 119 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH------HHHHhCcEEEEEEEecCCCchhHHHHH-
Confidence 356899999999 899999999999999999999999998543321 111111 12 2345665333 2243
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHHhhc--CeEEEeecCeeeeEccCchhhH-Hhhh--cCCeecccCCCCCccc
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEAYRG--IKRITIKPQTDPWVFPQTRRGI-IILA--ERLLMNLGCPTGHPSF 209 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~~~~--~~~~~i~~~~~~~~~~~~~~ai-~ll~--~G~ivNl~s~~g~p~~ 209 (243)
+.+..+.-|..|+|+|....- +..-+.. ++ ++ ..++.|......-..- .+ .+++ .|-|+|++|++|.-..
T Consensus 120 ~~l~~~~VgILVNNvG~~~~~-P~~f~~~-~~~~~~-~ii~vN~~~~~~~t~~-ilp~M~~r~~G~IvnigS~ag~~p~ 194 (312)
T KOG1014|consen 120 EKLAGLDVGILVNNVGMSYDY-PESFLKY-PEGELQ-NIINVNILSVTLLTQL-ILPGMVERKKGIIVNIGSFAGLIPT 194 (312)
T ss_pred HHhcCCceEEEEecccccCCC-cHHHHhC-chhhhh-heeEEecchHHHHHHH-hhhhhhcCCCceEEEeccccccccC
Confidence 457777888889999987411 1111111 10 11 1122333221111111 23 3443 4999999998765443
No 309
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.71 E-value=0.00018 Score=54.57 Aligned_cols=64 Identities=28% Similarity=0.316 Sum_probs=50.2
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc-----CH---Hh-hhcCCcEEEEccCCh
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL-----TR---ED-VVSEAGLFVTTTENA 130 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~-----~~---~~-~~~~aDvvi~a~G~~ 130 (243)
++|+|+|.+|+.+++.|+..+.+|+++|.++.+...+...|+.++ +. .+ -+..+|.++.++++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH
Confidence 689999999999999999977799999999998888888886542 11 11 246788888887764
No 310
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=97.71 E-value=0.00021 Score=63.91 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=73.4
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV-- 117 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~-- 117 (243)
++++... . ..+|++|+|.|.|.+|..+++.++..|++ |++++.++.+...+...|.+ +++ ..+ ..
T Consensus 155 ~~~l~~~-~-~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 232 (343)
T cd08235 155 INAQRKA-G-IKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDG 232 (343)
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCC
Confidence 4555333 2 46899999999999999999999999998 88888888776665555653 221 111 12
Q ss_pred cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.++|++++|+|....+. ..++.++++++++..|..
T Consensus 233 ~~vd~vld~~~~~~~~~-~~~~~l~~~g~~v~~~~~ 267 (343)
T cd08235 233 RGADVVIVATGSPEAQA-QALELVRKGGRILFFGGL 267 (343)
T ss_pred cCCCEEEECCCChHHHH-HHHHHhhcCCEEEEEecc
Confidence 24899999988665554 468889999999988754
No 311
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.70 E-value=0.00034 Score=60.96 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=75.1
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC--HHhh-------h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT--REDV-------V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~--~~~~-------~--~~aDvvi~a~ 127 (243)
..+|.+|+|-- +|++|+.+.|++++.|++++.+-...++.+.|.+.|++ .++ -+|. . ++.|++++..
T Consensus 144 vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsv 223 (336)
T KOG1197|consen 144 VKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSV 223 (336)
T ss_pred CCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccc
Confidence 46899999976 67999999999999999999887778888888899985 222 1221 1 5899999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCCCCCCh
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFDNEIDM 159 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~ 159 (243)
|... +. ..+..+|+.|.+|..|-....+|.
T Consensus 224 G~dt-~~-~sl~~Lk~~G~mVSfG~asgl~~p 253 (336)
T KOG1197|consen 224 GKDT-FA-KSLAALKPMGKMVSFGNASGLIDP 253 (336)
T ss_pred cchh-hH-HHHHHhccCceEEEeccccCCCCC
Confidence 8754 33 368889999999998876533333
No 312
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.69 E-value=0.00042 Score=62.82 Aligned_cols=98 Identities=26% Similarity=0.193 Sum_probs=70.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHhh-----cCCcc---cCHHhhhcCCcEEEEccCChh-
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQALT-----EGIPV---LTREDVVSEAGLFVTTTENAD- 131 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~~-----~G~~~---~~~~~~~~~aDvvi~a~G~~~- 131 (243)
..++++|+|+|.+|+..+..+.. .+. +|.++++++++.+.... .|..+ .++++++.++|+|+.||.+..
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p 210 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc
Confidence 45899999999999998888875 665 79999999887544322 24432 346777889999999987654
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
++.. +.+++|..+..+|... .++|.+.+.
T Consensus 211 ~i~~---~~l~~g~~v~~vg~d~~~~rEld~~~l~ 242 (330)
T PRK08291 211 ILKA---EWLHPGLHVTAMGSDAEHKNEIAPAVFA 242 (330)
T ss_pred EecH---HHcCCCceEEeeCCCCCCcccCCHHHHh
Confidence 4543 3468888888877642 456655443
No 313
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.69 E-value=0.00038 Score=61.52 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=72.9
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH---Hhh---hcCCcE
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR---EDV---VSEAGL 122 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~---~~~---~~~aDv 122 (243)
|+++.. .. ..+|++++|.|+ |++|+.+++.++..|++|+++..++.+.......|.+ +.+. .+. ..+.|+
T Consensus 152 ~~~l~~-~~-~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 229 (332)
T cd08259 152 VHALKR-AG-VKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADV 229 (332)
T ss_pred HHHHHH-hC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhccCCCE
Confidence 455443 22 357899999997 7999999999999999999888887776555555542 2222 121 136899
Q ss_pred EEEccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+++++|... + ...++.+++++.++.+|...
T Consensus 230 v~~~~g~~~-~-~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 230 VIELVGSPT-I-EESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred EEECCChHH-H-HHHHHHhhcCCEEEEEcCCC
Confidence 999998765 3 34688889999999988653
No 314
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.69 E-value=0.00013 Score=64.76 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=62.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-cCHHhhhcCCcEEEEccCChhcc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-LTREDVVSEAGLFVTTTENADII 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i 133 (243)
..+++..||.|.+|..++..|...|.+|+|+|++..++......|.++ .++.|+.+.+|++|.+.+++...
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v 105 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDV 105 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhh
Confidence 468999999999999999999999999999999998877777788875 46889999999999998876543
No 315
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00012 Score=63.06 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=34.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|++ .||+.+|+.|...|++|++.++++.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3679999999977 9999999999999999999998754
No 316
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.68 E-value=0.0002 Score=63.50 Aligned_cols=90 Identities=23% Similarity=0.273 Sum_probs=64.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCC--chhHHHHhhcCCc--c-cCH-HhhhcCCcEEEEccCCh---hccc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEID--LICALQALTEGIP--V-LTR-EDVVSEAGLFVTTTENA---DIIM 134 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~--~~r~~~a~~~G~~--~-~~~-~~~~~~aDvvi~a~G~~---~~i~ 134 (243)
-++|+|+|.|-||..+|+.++..|..|.+++.+ ...+..+...|.. . .+. .+....+|+||-|+.-. .++.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l~ 82 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVLK 82 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHHH
Confidence 368999999999999999999999987665554 4445455555642 1 222 45566899999997643 3342
Q ss_pred HHHHccCCCCeEEEEecCCC
Q 037949 135 VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.-..+++|++|..+|...
T Consensus 83 -~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 83 -ELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred -HhcccCCCCCEEEeccccc
Confidence 2333688999999999875
No 317
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.68 E-value=0.00019 Score=62.62 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=52.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC---CEEEEEeCCchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG---ARVMGTEIDLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G---a~V~v~d~~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
.++.|||+|.||..++..+...| .+|.++|+++++...... .|..+ .+..+.+..+|+|+.|+...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHH
Confidence 46999999999999999999888 689999999887655544 36543 34556677899999997543
No 318
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00014 Score=63.77 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=32.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|+|.||+.+|+.+. .|++|+++++++.++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~ 37 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENL 37 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHH
Confidence 578999999999999999996 899999999987654
No 319
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.67 E-value=0.00049 Score=62.84 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=70.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcCCc---ccCHHhhhcCCcEEEEccCCh---h
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEGIP---VLTREDVVSEAGLFVTTTENA---D 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G~~---~~~~~~~~~~aDvvi~a~G~~---~ 131 (243)
-++++|+|+|..++..++.+.. +.. +|.++++++++.+... ..+++ +.+.++++.++|+|+.||.+. +
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~P 208 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNAT 208 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCCc
Confidence 4899999999999887766554 455 7999999998754322 12443 245788899999999998654 4
Q ss_pred cccHHHHccCCCCeEEEEecCCC---CCCChhHHH
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD---NEIDMLDLE 163 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~---~~id~~~l~ 163 (243)
++.. +++++|..|+.+|... .|+|.+.+.
T Consensus 209 vl~~---~~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 209 ILTD---DMVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred eecH---HHcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 4543 4679999999999763 566655443
No 320
>PRK08324 short chain dehydrogenase; Validated
Probab=97.67 E-value=0.00014 Score=72.08 Aligned_cols=42 Identities=36% Similarity=0.493 Sum_probs=37.1
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.++|++++|+|+ |+||+.+++.+...|++|+++|+++.++..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~ 461 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEA 461 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence 357899999995 799999999999999999999999876543
No 321
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.66 E-value=0.00038 Score=61.56 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=71.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC------HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT------REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~------~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|.|++|+.+++.+++.|++|++++.++.+...+...|.+ +++ ..+. . .++|++++++
T Consensus 158 ~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 237 (336)
T cd08276 158 LKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVG 237 (336)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECC
Confidence 3578999999999999999999999999999999888877666656653 221 1111 1 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .+. ..++.++++|+++.+|..+
T Consensus 238 ~~~-~~~-~~~~~l~~~G~~v~~g~~~ 262 (336)
T cd08276 238 GPG-TLA-QSIKAVAPGGVISLIGFLS 262 (336)
T ss_pred ChH-HHH-HHHHhhcCCCEEEEEccCC
Confidence 754 344 4789999999999998754
No 322
>PRK06484 short chain dehydrogenase; Validated
Probab=97.66 E-value=0.00019 Score=68.27 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
..||+++|+|++ +||+.+|+.|...|++|+++++++.++..
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 308 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKK 308 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 478999999987 89999999999999999999998776543
No 323
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.65 E-value=0.00025 Score=61.33 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|++ .||+.+++.|...|++|+++++++.++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 43 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ 43 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999986 8999999999999999999999876543
No 324
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.00014 Score=62.47 Aligned_cols=67 Identities=25% Similarity=0.275 Sum_probs=52.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--cCCccc-----C---HHhh-hcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT--EGIPVL-----T---REDV-VSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--~G~~~~-----~---~~~~-~~~aDvvi~a~G~~~ 131 (243)
++++|+|+|.+|..+|+.|...|.+|+++|.++.+..+... ....++ + +.++ +.++|+++.++|+..
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 47899999999999999999999999999999998766443 343322 1 2333 568999999998743
No 325
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00022 Score=61.78 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=35.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~ 47 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL 47 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 579999999987 799999999999999999999987654
No 326
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=97.64 E-value=0.00022 Score=64.74 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=71.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+|.+|..+++.++.+|++ |++++.++.+...+...|++ +++ ..+ .. .+.|++++++
T Consensus 180 ~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~ 259 (363)
T cd08279 180 VRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV 259 (363)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcC
Confidence 35789999999999999999999999996 88888888877666556653 221 111 11 3589999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|....+. +.++.++++++++..|..+
T Consensus 260 ~~~~~~~-~~~~~l~~~G~~v~~g~~~ 285 (363)
T cd08279 260 GRAATIR-QALAMTRKGGTAVVVGMGP 285 (363)
T ss_pred CChHHHH-HHHHHhhcCCeEEEEecCC
Confidence 8655554 5788899999999988653
No 327
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=97.64 E-value=0.00023 Score=63.46 Aligned_cols=88 Identities=14% Similarity=0.112 Sum_probs=67.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCc-ccC----HHhhh-----cCCcEEEEccCChh
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIP-VLT----REDVV-----SEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~~-----~~aDvvi~a~G~~~ 131 (243)
|++|+|.|+ |.+|+.+++.++.+ |++|+++..++++...+...|++ +++ ..+.+ .+.|+++++++...
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~ 228 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQ 228 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHH
Confidence 899999996 79999999999998 99999998877777666667763 222 21211 25899999986655
Q ss_pred cccHHHHccCCCCeEEEEecC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+. ..++.++++|++++.+.
T Consensus 229 ~~~-~~~~~l~~~G~~v~~~~ 248 (336)
T TIGR02817 229 HFK-EIVELLAPQGRFALIDD 248 (336)
T ss_pred HHH-HHHHHhccCCEEEEEcc
Confidence 554 57899999999998753
No 328
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.63 E-value=0.00024 Score=62.69 Aligned_cols=89 Identities=13% Similarity=0.086 Sum_probs=61.6
Q ss_pred cCcEEEEEcCChHHHHHHHHHHh--CCCEEE-EEeCCchhHHHH-hhcCC-c-ccCHHhhhcCCcEEEEccCChhcccHH
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKA--VGARVM-GTEIDLICALQA-LTEGI-P-VLTREDVVSEAGLFVTTTENADIIMVR 136 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~--~Ga~V~-v~d~~~~r~~~a-~~~G~-~-~~~~~~~~~~aDvvi~a~G~~~~i~~~ 136 (243)
...+++|+|+|.||..+++.+.. .++++. ++|+++.+.... ...|. . ..+.++.+.++|+|++|+++.... .-
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~~h~-e~ 83 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPASVLR-AI 83 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcHHHH-HH
Confidence 34789999999999999999986 477765 689998775433 23453 2 346778888899999998765322 22
Q ss_pred HHccCCCCeEEEEecC
Q 037949 137 HMKQMKNAAIVCNIGH 152 (243)
Q Consensus 137 ~l~~l~~g~~vvnvg~ 152 (243)
....++.|..++....
T Consensus 84 ~~~aL~aGk~Vi~~s~ 99 (271)
T PRK13302 84 VEPVLAAGKKAIVLSV 99 (271)
T ss_pred HHHHHHcCCcEEEecc
Confidence 2444566666665443
No 329
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.63 E-value=0.00028 Score=67.15 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=55.9
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcccCHHh--hhcCCcEEEEcc
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVLTRED--VVSEAGLFVTTT 127 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~~~~~--~~~~aDvvi~a~ 127 (243)
+.++++. +..+.+++++|+|+|.+|++++..+...|++|+++++++.+...... .+....+..+ .+.++|+|+.|+
T Consensus 320 ~~~l~~~-~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInat 398 (477)
T PRK09310 320 FSLLKQK-NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINCL 398 (477)
T ss_pred HHHHHhc-CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEEEcC
Confidence 3444332 33568899999999999999999999999999999998876543322 2222232222 246899999997
Q ss_pred CCh
Q 037949 128 ENA 130 (243)
Q Consensus 128 G~~ 130 (243)
...
T Consensus 399 P~g 401 (477)
T PRK09310 399 PPS 401 (477)
T ss_pred CCC
Confidence 543
No 330
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.63 E-value=0.0003 Score=59.68 Aligned_cols=36 Identities=22% Similarity=0.098 Sum_probs=32.5
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+|+++|+|++ .||+.+|+.|...|++|+++++++..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 5799999986 89999999999999999999988754
No 331
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.63 E-value=0.00017 Score=62.28 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=34.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.+++|+++|+|++ .||+.+++.|...|++|++.++++.+
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3679999999975 99999999999999999999988754
No 332
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.63 E-value=0.00015 Score=62.28 Aligned_cols=40 Identities=28% Similarity=0.382 Sum_probs=35.9
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++|++++|+|++ .||+.+++.+...|++|+++++++..+
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~ 48 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATL 48 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence 4689999999986 899999999999999999999987654
No 333
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=97.63 E-value=0.00026 Score=63.63 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=69.5
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccCC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G~ 129 (243)
.+|++++|.|+ |++|+.+++.++.+|++|+.+. ++.+...+...|++ +++ ..+.+ .+.|++++++|.
T Consensus 153 ~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~ 231 (339)
T cd08249 153 SKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231 (339)
T ss_pred CCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence 47999999997 7999999999999999988766 55666666666763 221 11211 358999999987
Q ss_pred hhcccHHHHccCCC--CeEEEEecCCC
Q 037949 130 ADIIMVRHMKQMKN--AAIVCNIGHFD 154 (243)
Q Consensus 130 ~~~i~~~~l~~l~~--g~~vvnvg~~~ 154 (243)
+..+. +.++.+++ +|+++.+|...
T Consensus 232 ~~~~~-~~~~~l~~~~~g~~v~~g~~~ 257 (339)
T cd08249 232 PESAQ-LCAEALGRSGGGKLVSLLPVP 257 (339)
T ss_pred chHHH-HHHHHHhccCCCEEEEecCCC
Confidence 55554 57899999 99999988654
No 334
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.62 E-value=0.00021 Score=65.88 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=60.6
Q ss_pred cCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHH
Q 037949 63 AGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHM 138 (243)
Q Consensus 63 ~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l 138 (243)
..++++|+| .|.||..+|..++..|.+|+++|+++. .+..+.+.++|+||.|+.... ++. + +
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------~~~~~~~~~aDlVilavP~~~~~~~~~-~-l 162 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------DRAEDILADAGMVIVSVPIHLTEEVIA-R-L 162 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------hhHHHHHhcCCEEEEeCcHHHHHHHHH-H-H
Confidence 358899999 999999999999999999999998642 123456678999999986543 232 2 3
Q ss_pred ccCCCCeEEEEecCCC
Q 037949 139 KQMKNAAIVCNIGHFD 154 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~~ 154 (243)
..++++++|+.+|...
T Consensus 163 ~~l~~~~iv~Dv~SvK 178 (374)
T PRK11199 163 PPLPEDCILVDLTSVK 178 (374)
T ss_pred hCCCCCcEEEECCCcc
Confidence 3378899999988764
No 335
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.61 E-value=0.00035 Score=62.58 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=57.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChh---cccHHHHc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENAD---IIMVRHMK 139 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~---~i~~~~l~ 139 (243)
.+.+|.|+|+|.+|..+|+.+...|.+|.++++++. .++.+.++++|+|+.|+.... +++ .+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~------------~~~~~~~~~advvi~~vp~~~~~~v~~--~l~ 68 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG------------LSLAAVLADADVIVSAVSMKGVRPVAE--QVQ 68 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC------------CCHHHHHhcCCEEEEECChHHHHHHHH--HHH
Confidence 356899999999999999999999999999998763 245566778999999976542 221 232
Q ss_pred --cCCCCeEEEEecC
Q 037949 140 --QMKNAAIVCNIGH 152 (243)
Q Consensus 140 --~l~~g~~vvnvg~ 152 (243)
.++++.++++...
T Consensus 69 ~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 69 ALNLPPETIIVTATK 83 (308)
T ss_pred HhcCCCCcEEEEeCC
Confidence 3567788887654
No 336
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.61 E-value=0.00048 Score=59.96 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=69.4
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++|+|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++++
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMV 216 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECC
Confidence 357899999996 7999999999999999999998888777666555643 211 111 11 3689999999
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. ..++.+++++.++++|..
T Consensus 217 g~~~-~~-~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 217 GGDY-LA-RNLRALAPDGRLVLIGLL 240 (323)
T ss_pred chHH-HH-HHHHhhccCCEEEEEecC
Confidence 8765 33 468888999999998865
No 337
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.61 E-value=0.00027 Score=63.28 Aligned_cols=88 Identities=23% Similarity=0.160 Sum_probs=65.5
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh---hcCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV---VSEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~---~~~aDvvi~a~G~~~~ 132 (243)
+|++|+|.|+ |++|+.+++.++.+|++|+++..+ .+...+...|.+ +++ ..+. ..+.|++++++|.+ .
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~ 239 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-T 239 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH-H
Confidence 4999999995 899999999999999998877644 444455555653 221 1111 14689999999876 4
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+. ..++.++++|+++++|..
T Consensus 240 ~~-~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 240 EK-WALKLLKKGGTYVTLVSP 259 (350)
T ss_pred HH-HHHHHhccCCEEEEecCC
Confidence 43 579999999999998854
No 338
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.61 E-value=0.00019 Score=61.24 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=60.7
Q ss_pred EEEEEcCChHHHHHHHHHHhC--CC-EEEEEeCCchhHHHHhh-cCC-cccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAV--GA-RVMGTEIDLICALQALT-EGI-PVLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~--Ga-~V~v~d~~~~r~~~a~~-~G~-~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+|+++|||.||..+...++.- .+ -|.++|++.++...+.. .+. .+.++++.+.+.|++++|.+...+ ..-..+.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~Av-~e~~~~~ 80 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPEAV-REYVPKI 80 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHHHH-HHHhHHH
Confidence 689999999999999999854 45 47889999987643332 233 245678888999999999765433 2223444
Q ss_pred CCC--CeEEEEecCC
Q 037949 141 MKN--AAIVCNIGHF 153 (243)
Q Consensus 141 l~~--g~~vvnvg~~ 153 (243)
++. +.+|+++|-.
T Consensus 81 L~~g~d~iV~SVGAL 95 (255)
T COG1712 81 LKAGIDVIVMSVGAL 95 (255)
T ss_pred HhcCCCEEEEechhc
Confidence 444 5666666654
No 339
>PRK05717 oxidoreductase; Validated
Probab=97.61 E-value=0.0003 Score=60.43 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=36.5
Q ss_pred cccccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 59 DITIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 59 ~~~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+..+.||+++|+|++ .||+.+|+.+...|++|+++++++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~ 47 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG 47 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 345789999999975 999999999999999999999887654
No 340
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.60 E-value=0.00037 Score=60.34 Aligned_cols=41 Identities=27% Similarity=0.339 Sum_probs=36.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.+++++|+|++ .||+.++..+...|++|++.++++.++.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~ 48 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD 48 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4678999999987 8999999999999999999998876553
No 341
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00023 Score=65.81 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=60.5
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHHHhhcC---Cc--ccC------HHhhhcCCcEEEEccCChhc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQALTEG---IP--VLT------REDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~a~~~G---~~--~~~------~~~~~~~aDvvi~a~G~~~~ 132 (243)
++++|+|+|.||+.+|..+...| .+|++.|+++.++.++...+ .+ .++ +.+++++.|+||.|.+-...
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 68999999999999999999999 69999999988877765543 22 122 34567888999999543222
Q ss_pred ccHHHH-ccCCCCeEEEEecCC
Q 037949 133 IMVRHM-KQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l-~~l~~g~~vvnvg~~ 153 (243)
. ..+ ..++.|.-++.++..
T Consensus 82 ~--~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 82 L--TILKACIKTGVDYVDTSYY 101 (389)
T ss_pred H--HHHHHHHHhCCCEEEcccC
Confidence 1 222 222455555555544
No 342
>PLN02477 glutamate dehydrogenase
Probab=97.60 E-value=0.00025 Score=66.10 Aligned_cols=91 Identities=18% Similarity=0.279 Sum_probs=61.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeCC----------chhHHHHhhc--------CCcccCHHhhh-c
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEID----------LICALQALTE--------GIPVLTREDVV-S 118 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~~----------~~r~~~a~~~--------G~~~~~~~~~~-~ 118 (243)
+..+.|++|+|.|+|++|+.+|+.|...|++|+ |+|.+ ...+...... +.+.++.++.+ .
T Consensus 201 g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~i~~~e~l~~ 280 (410)
T PLN02477 201 GKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDPIDPDDILVE 280 (410)
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceEecCccceec
Confidence 446899999999999999999999999999988 77876 4333222111 11122333332 4
Q ss_pred CCcEEEEccCChhcccHHHHccCCCCeEEEEecC
Q 037949 119 EAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 119 ~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~ 152 (243)
.+||++.|. ....|+.+..+.+ .+.+|.-|.
T Consensus 281 ~~DvliP~A-l~~~I~~~na~~i--~ak~I~egA 311 (410)
T PLN02477 281 PCDVLIPAA-LGGVINKENAADV--KAKFIVEAA 311 (410)
T ss_pred cccEEeecc-ccccCCHhHHHHc--CCcEEEeCC
Confidence 799999985 3345777667765 556654443
No 343
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.59 E-value=0.00038 Score=56.31 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=57.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--------Cc-------ccCHHhhhcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--------IP-------VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--------~~-------~~~~~~~~~~aDvvi~a~G~~ 130 (243)
+|.|+|+|..|.++|..+...|.+|.++.+++...+.-...+ .. ..+++++++++|+++.++.+.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 589999999999999999999999999999986543322211 11 124667889999999987553
Q ss_pred h---cccHHHHccCCCCeEEEEecC
Q 037949 131 D---IIMVRHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 131 ~---~i~~~~l~~l~~g~~vvnvg~ 152 (243)
. .+. +.-..++++..++++.-
T Consensus 81 ~~~~~~~-~l~~~l~~~~~ii~~~K 104 (157)
T PF01210_consen 81 AHREVLE-QLAPYLKKGQIIISATK 104 (157)
T ss_dssp GHHHHHH-HHTTTSHTT-EEEETS-
T ss_pred HHHHHHH-HHhhccCCCCEEEEecC
Confidence 3 332 23444567777777543
No 344
>PRK07680 late competence protein ComER; Validated
Probab=97.59 E-value=0.00041 Score=61.00 Aligned_cols=95 Identities=22% Similarity=0.228 Sum_probs=64.3
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC----EEEEEeCCchhHHHHhh-c-CCcc-cCHHhhhcCCcEEEEccCChh---cccH
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA----RVMGTEIDLICALQALT-E-GIPV-LTREDVVSEAGLFVTTTENAD---IIMV 135 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga----~V~v~d~~~~r~~~a~~-~-G~~~-~~~~~~~~~aDvvi~a~G~~~---~i~~ 135 (243)
++.|||+|.+|..++..+...|. +|+++++++.+...... . |+.. .+..+.+..+|+|+.|+.... ++.
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl~- 80 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQ- 80 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHHH-
Confidence 58999999999999999998883 79999999877644433 2 5543 355666789999999974322 121
Q ss_pred HHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 136 RHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
+....++++.+++.+.-+ ++.+.+..
T Consensus 81 ~l~~~l~~~~~iis~~ag---~~~~~L~~ 106 (273)
T PRK07680 81 KLAPHLTDEHCLVSITSP---ISVEQLET 106 (273)
T ss_pred HHHhhcCCCCEEEEECCC---CCHHHHHH
Confidence 122345667788876643 34444443
No 345
>PRK06484 short chain dehydrogenase; Validated
Probab=97.59 E-value=0.00031 Score=66.79 Aligned_cols=41 Identities=15% Similarity=0.308 Sum_probs=36.5
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
.+||+++|+|++ .||+.+|+.|...|++|+++++++.++..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 44 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARE 44 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 468999999987 89999999999999999999998876543
No 346
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00023 Score=61.06 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=33.6
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
||+++|+|++ .||+.+++.+...|++|+++++++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~ 38 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL 38 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5899999987 899999999999999999999987654
No 347
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=97.58 E-value=0.00069 Score=61.44 Aligned_cols=98 Identities=22% Similarity=0.176 Sum_probs=73.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-CCC-EEEEEeCCchhHHHHh----hcC-Cc---ccCHHhhhcCCcEEEEccCCh-hc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-VGA-RVMGTEIDLICALQAL----TEG-IP---VLTREDVVSEAGLFVTTTENA-DI 132 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~Ga-~V~v~d~~~~r~~~a~----~~G-~~---~~~~~~~~~~aDvvi~a~G~~-~~ 132 (243)
-++++|||+|..+...++.++. ++. +|.+++++++..+... ..+ .+ +.+.++++++||+|+.||.+. ++
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pi 209 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPV 209 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCe
Confidence 5799999999999999888885 556 8999999998754433 222 22 345678899999999998665 45
Q ss_pred ccHHHHccCCCCeEEEEecCC---CCCCChhHHHH
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF---DNEIDMLDLEA 164 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~---~~~id~~~l~~ 164 (243)
+.. +++++|..|+.+|.. ..|+|.+.+..
T Consensus 210 l~~---~~l~~G~hI~aiGad~p~k~Eld~e~l~r 241 (330)
T COG2423 210 LKA---EWLKPGTHINAIGADAPGKRELDPEVLAR 241 (330)
T ss_pred ecH---hhcCCCcEEEecCCCCcccccCCHHHHHh
Confidence 543 567899999999964 25677766654
No 348
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.58 E-value=0.00025 Score=60.90 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+|+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~ 46 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERA 46 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 579999999976 899999999999999999999987654
No 349
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=97.58 E-value=0.00065 Score=59.23 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=70.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHh----hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RED----VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~----~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |++|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+ .. .+.|++++++
T Consensus 137 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~ 216 (323)
T cd08241 137 LQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPV 216 (323)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECc
Confidence 357899999998 8999999999999999999998888777666655642 111 111 11 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. ..+ ..+..++++|.++++|...
T Consensus 217 g~~-~~~-~~~~~~~~~g~~v~~~~~~ 241 (323)
T cd08241 217 GGD-VFE-ASLRSLAWGGRLLVIGFAS 241 (323)
T ss_pred cHH-HHH-HHHHhhccCCEEEEEccCC
Confidence 874 343 4688899999999988653
No 350
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.57 E-value=0.00035 Score=60.08 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ .||+.+|+.|...|++|++...+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 578999999975 999999999999999998876544
No 351
>PRK06194 hypothetical protein; Provisional
Probab=97.57 E-value=0.0003 Score=61.44 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|++ .||+.+++.|...|++|+++|+++..+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~ 43 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL 43 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 468999999975 899999999999999999999987654
No 352
>PRK12862 malic enzyme; Reviewed
Probab=97.57 E-value=0.0006 Score=68.18 Aligned_cols=121 Identities=19% Similarity=0.215 Sum_probs=89.1
Q ss_pred hhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC------------chhHHHH
Q 037949 42 NLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID------------LICALQA 103 (243)
Q Consensus 42 ~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~------------~~r~~~a 103 (243)
..+|++.....++.. ..+..+...+++|.|+|.-|.++++.+...|+ +++++|.. +.+...|
T Consensus 168 D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l~~~~~~~a 247 (763)
T PRK12862 168 DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELMDPWKARYA 247 (763)
T ss_pred CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCccccHHHHHHh
Confidence 344555544444432 23445788999999999999999999999999 79999832 2333333
Q ss_pred hhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 104 LTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 104 ~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
... ...++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|+..+....|
T Consensus 248 ~~~--~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~ 306 (763)
T PRK12862 248 QKT--DARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALANPTPEILPEEARAV 306 (763)
T ss_pred hhc--ccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCCCCcccCCHHHHHHh
Confidence 332 23468899999999999987 789999999999988888877766567777766554
No 353
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=97.57 E-value=0.00065 Score=58.12 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=70.8
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCC--c-ccC-----HHh----hh--cCCcEEEE
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGI--P-VLT-----RED----VV--SEAGLFVT 125 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~--~-~~~-----~~~----~~--~~aDvvi~ 125 (243)
..+|++|+|.| .|.+|+.+++.++.+|++|++++.++.+...+...|. + +++ ..+ .. .+.|++++
T Consensus 102 ~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 181 (288)
T smart00829 102 LRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLN 181 (288)
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEe
Confidence 35799999999 5899999999999999999999988888777766665 2 221 111 11 25899999
Q ss_pred ccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 126 TTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|. ..+. ..++.+++++.++.+|..+
T Consensus 182 ~~~~-~~~~-~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 182 SLAG-EFLD-ASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred CCCH-HHHH-HHHHhccCCcEEEEEcCcC
Confidence 9885 4444 4788899999999998653
No 354
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00027 Score=60.56 Aligned_cols=39 Identities=31% Similarity=0.464 Sum_probs=35.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~ 44 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG 44 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578999999986 899999999999999999999987654
No 355
>PRK09242 tropinone reductase; Provisional
Probab=97.56 E-value=0.00045 Score=59.38 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
.+.||+++|+|++ .||+.+++.+...|++|++++++++.+.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 47 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALA 47 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3679999999975 9999999999999999999999876543
No 356
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.56 E-value=0.00014 Score=62.90 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.6
Q ss_pred ccCcEEEEEcC---ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH---GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~---G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|+ ++||+.+|+.|...|++|++++++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc
Confidence 57899999997 5999999999999999999998764
No 357
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.56 E-value=0.00068 Score=59.39 Aligned_cols=101 Identities=21% Similarity=0.184 Sum_probs=68.0
Q ss_pred hhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH--h----hh--cCC
Q 037949 51 PDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE--D----VV--SEA 120 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~--~----~~--~~a 120 (243)
++++.+.. ...+|++|+|.|+ |++|+.+++.++..|++|++++.+ .+...+...|.+ +++.. + .. .+.
T Consensus 132 ~~~~~~~~-~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 209 (319)
T cd08267 132 LQALRDAG-KVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKY 209 (319)
T ss_pred HHHHHHhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCC
Confidence 44444332 2357999999997 899999999999999999888765 555555556653 22211 1 11 358
Q ss_pred cEEEEccCChh-cccHHHHccCCCCeEEEEecCCC
Q 037949 121 GLFVTTTENAD-IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 121 Dvvi~a~G~~~-~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|++++|+|... ... .....++++|+++.+|..+
T Consensus 210 d~vi~~~~~~~~~~~-~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 210 DVIFDAVGNSPFSLY-RASLALKPGGRYVSVGGGP 243 (319)
T ss_pred cEEEECCCchHHHHH-HhhhccCCCCEEEEecccc
Confidence 99999988432 121 2233489999999998764
No 358
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00055 Score=58.95 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.|++++|+|++ +||+.+++.+...|++|+++++++.+..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE 45 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 578999999985 8999999999999999999999877543
No 359
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=97.56 E-value=0.00027 Score=60.64 Aligned_cols=87 Identities=10% Similarity=0.054 Sum_probs=56.1
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcC-Cccc--CH-HhhhcCCcEEEEccCChhcccH
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEG-IPVL--TR-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G-~~~~--~~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
++|++|+|+|+|.++..=+..|...||+|+|+-+ +++-...+ ..| +... +. .+.+.++++|+.||..+. ++.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~r~~~~~dl~g~~LViaATdD~~-vN~ 100 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIKGNYDKEFIKDKHLIVIATDDEK-LNN 100 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEeCCCChHHhCCCcEEEECCCCHH-HHH
Confidence 5689999999999999989999999999999844 33322112 222 2221 11 234578999999997765 444
Q ss_pred HHHccCCC-CeEEEEe
Q 037949 136 RHMKQMKN-AAIVCNI 150 (243)
Q Consensus 136 ~~l~~l~~-g~~vvnv 150 (243)
......+. +..++++
T Consensus 101 ~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 101 KIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHcCCeEEEc
Confidence 33444444 4445443
No 360
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.55 E-value=0.0006 Score=60.17 Aligned_cols=86 Identities=8% Similarity=0.162 Sum_probs=60.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCch-hHHHHh-hcCCcc-cCHHhhhcCCcEEEEccCChhc---c
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLI-CALQAL-TEGIPV-LTREDVVSEAGLFVTTTENADI---I 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~-r~~~a~-~~G~~~-~~~~~~~~~aDvvi~a~G~~~~---i 133 (243)
..++.+||+|.+|..++..+...| .+|+++++++. ++.... ..|... .+..+.++.+|+||.|+..... +
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~vl 82 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEAL 82 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHHH
Confidence 458999999999999999999988 57999998764 333322 346643 3556677889999999765432 2
Q ss_pred cHHHHccCCCCeEEEEe
Q 037949 134 MVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnv 150 (243)
. +....++++.+++++
T Consensus 83 ~-~l~~~~~~~~liIs~ 98 (279)
T PRK07679 83 I-PFKEYIHNNQLIISL 98 (279)
T ss_pred H-HHHhhcCCCCEEEEE
Confidence 1 223345667788875
No 361
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=97.55 E-value=0.00045 Score=60.11 Aligned_cols=92 Identities=21% Similarity=0.337 Sum_probs=63.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE--------eCCchhHHHHh----hcCCcc-------------cCHH-
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT--------EIDLICALQAL----TEGIPV-------------LTRE- 114 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~--------d~~~~r~~~a~----~~G~~~-------------~~~~- 114 (243)
.+.|++++|-|+|.+|..+|+.|...|++|+.+ |++........ ..|.++ ++.+
T Consensus 29 ~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 108 (244)
T PF00208_consen 29 SLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKEERGSRVDDYPLESPDGAEYIPNDD 108 (244)
T ss_dssp SSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHHHHSSHSTTGTHTCSSTSEEECHHC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHHHhCCcccccccccccceeEecccc
Confidence 478999999999999999999999999987665 54443322211 112211 1222
Q ss_pred hhh-cCCcEEEEccCChhcccHHHHc-cCCCCeEEEEecCC
Q 037949 115 DVV-SEAGLFVTTTENADIIMVRHMK-QMKNAAIVCNIGHF 153 (243)
Q Consensus 115 ~~~-~~aDvvi~a~G~~~~i~~~~l~-~l~~g~~vvnvg~~ 153 (243)
+.+ ..+||++.| .....|+.+... .+++++.+|.-|-.
T Consensus 109 ~il~~~~DiliP~-A~~~~I~~~~~~~~i~~~akiIvegAN 148 (244)
T PF00208_consen 109 EILSVDCDILIPC-ALGNVINEDNAPSLIKSGAKIIVEGAN 148 (244)
T ss_dssp HGGTSSSSEEEEE-SSSTSBSCHHHCHCHHTT-SEEEESSS
T ss_pred ccccccccEEEEc-CCCCeeCHHHHHHHHhccCcEEEeCcc
Confidence 343 489999999 455677777788 88888888876654
No 362
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.55 E-value=0.00039 Score=65.26 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=64.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-----------------ccCHHhhhcCCcEEEEc
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-----------------VLTREDVVSEAGLFVTT 126 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-----------------~~~~~~~~~~aDvvi~a 126 (243)
.-+|.|+|.|.+|+.+|..+.. |.+|+++|+++.+.+... .|.. ..+..+.++++|++|.|
T Consensus 6 ~mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~ 83 (425)
T PRK15182 6 EVKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIIT 83 (425)
T ss_pred CCeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEE
Confidence 3579999999999999999876 799999999999875443 4432 11223456799999999
Q ss_pred cCChh---------ccc---HHHHccCCCCeEEEEecCCC
Q 037949 127 TENAD---------IIM---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 127 ~G~~~---------~i~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
.+++. .+. ......+++|.+||+-+...
T Consensus 84 Vptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~ 123 (425)
T PRK15182 84 VPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVY 123 (425)
T ss_pred cCCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 88761 111 12346678899999877554
No 363
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=97.55 E-value=0.00093 Score=57.10 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=69.6
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcC--Cc-ccC-----HHh----hh--cCCcEEEE
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEG--IP-VLT-----RED----VV--SEAGLFVT 125 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G--~~-~~~-----~~~----~~--~~aDvvi~ 125 (243)
..+|++++|.| .|.+|+.+++.++.+|++|++++.++.+...+...| .+ +++ ..+ .. +++|++++
T Consensus 106 ~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 106 LQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEe
Confidence 35899999997 689999999999999999999888777765665555 22 221 111 11 26899999
Q ss_pred ccCChhcccHHHHccCCCCeEEEEecCCC
Q 037949 126 TTENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 126 a~G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
++|.+ .++ ..++.++++++++.+|..+
T Consensus 186 ~~~~~-~~~-~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 186 SLSGE-LLR-ASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred CCCch-HHH-HHHHhcccCceEEEeeccc
Confidence 99886 454 5789999999999988654
No 364
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.55 E-value=0.00033 Score=62.69 Aligned_cols=39 Identities=26% Similarity=0.201 Sum_probs=34.4
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCC-CEEEEEeCCchhHH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVG-ARVMGTEIDLICAL 101 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~G-a~V~v~d~~~~r~~ 101 (243)
.+++++|+|+. +||+.+|+.+...| ++|+++++++.+..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~ 42 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE 42 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 37899999987 89999999999999 89999998877653
No 365
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.54 E-value=0.00024 Score=61.01 Aligned_cols=40 Identities=25% Similarity=0.299 Sum_probs=35.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++||+++|+|+ |.||+.+++.+...|++|++.++++.+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~ 47 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL 47 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 367999999997 5999999999999999999999987654
No 366
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.53 E-value=0.00026 Score=59.04 Aligned_cols=89 Identities=20% Similarity=0.197 Sum_probs=54.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-c---------------------cCHHhhhcCCcE
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-V---------------------LTREDVVSEAGL 122 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~---------------------~~~~~~~~~aDv 122 (243)
.+|.|+|.|-+|+.+|..+...|.+|+.+|+|+.+.+. ...|.. . .+..++++.+|+
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~-l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKVEA-LNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHHHH-HHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHHHH-Hhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 37899999999999999999999999999999997643 333421 1 112334568999
Q ss_pred EEEccCChhc---------cc---HHHHccCCCCeEEEEecCCC
Q 037949 123 FVTTTENADI---------IM---VRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 123 vi~a~G~~~~---------i~---~~~l~~l~~g~~vvnvg~~~ 154 (243)
+|-|++++.- +. ...-..++++.+|++-+-.+
T Consensus 80 ~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvp 123 (185)
T PF03721_consen 80 VFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVP 123 (185)
T ss_dssp EEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSS
T ss_pred EEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEE
Confidence 9999875421 11 12344567888888866543
No 367
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=97.53 E-value=0.00043 Score=65.05 Aligned_cols=94 Identities=17% Similarity=0.172 Sum_probs=62.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeCC----------chhHHH---Hhhc-------------CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEID----------LICALQ---ALTE-------------GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~~----------~~r~~~---a~~~-------------G~~~~ 111 (243)
+..+.|++|+|-|+|++|..+|+.|...|++|+ ++|.+ .+.+.. .+.. +++.+
T Consensus 232 ~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~~ 311 (454)
T PTZ00079 232 NDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKYV 311 (454)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEEe
Confidence 446899999999999999999999999999988 78887 333211 1100 12222
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
+.++.+ ..|||.+-|. ....|+.+..+.+ +.++.+|.-|..
T Consensus 312 ~~~~~~~~~cDI~iPcA-~~n~I~~~~a~~l~~~~ak~V~EgAN 354 (454)
T PTZ00079 312 PGKKPWEVPCDIAFPCA-TQNEINLEDAKLLIKNGCKLVAEGAN 354 (454)
T ss_pred CCcCcccCCccEEEecc-ccccCCHHHHHHHHHcCCeEEEecCC
Confidence 222222 3799999985 3455666555544 667777765544
No 368
>PRK08643 acetoin reductase; Validated
Probab=97.53 E-value=0.00038 Score=59.69 Aligned_cols=37 Identities=27% Similarity=0.294 Sum_probs=33.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|+. .||+.+++.+...|++|+++++++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~ 39 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA 39 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 6899999977 899999999999999999999987654
No 369
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=97.53 E-value=0.00044 Score=61.15 Aligned_cols=89 Identities=18% Similarity=0.146 Sum_probs=67.2
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCHH---h----hh-cCCcEEEEccCChhc
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTRE---D----VV-SEAGLFVTTTENADI 132 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~~---~----~~-~~aDvvi~a~G~~~~ 132 (243)
.|++|+|.|+ |++|..+++.++.+|++|++++.++++...+...|++ +++.. . .. .+.|.++++.|.+.
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 224 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHT- 224 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHH-
Confidence 5789999998 8999999999999999999988888887677667763 22211 1 11 14678899988643
Q ss_pred ccHHHHccCCCCeEEEEecCC
Q 037949 133 IMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 133 i~~~~l~~l~~g~~vvnvg~~ 153 (243)
+. ..+..++.++.++..|..
T Consensus 225 ~~-~~~~~~~~~g~~~~~G~~ 244 (324)
T cd08288 225 LA-NVLAQTRYGGAVAACGLA 244 (324)
T ss_pred HH-HHHHHhcCCCEEEEEEec
Confidence 33 456777888999998875
No 370
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.53 E-value=0.00043 Score=61.62 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCE-EEEEeCCc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGAR-VMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~-V~v~d~~~ 97 (243)
.+.+++++|+|+|++|++++..+...|++ |+++++++
T Consensus 123 ~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 123 DVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 35789999999999999999999999995 99999986
No 371
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.53 E-value=0.0011 Score=58.54 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=78.4
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhC----CC-------EEEEEeCCc-----------hhHHHHhhcC-CcccCHHh
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAV----GA-------RVMGTEIDL-----------ICALQALTEG-IPVLTRED 115 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~----Ga-------~V~v~d~~~-----------~r~~~a~~~G-~~~~~~~~ 115 (243)
+..+.+.+++|+|+|.-|.++|+.+... |+ +++++|.+. .+...+.... .+..++.+
T Consensus 20 g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e 99 (279)
T cd05312 20 GKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLE 99 (279)
T ss_pred CCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHH
Confidence 4467899999999999999999888877 87 788888652 2222333211 12346788
Q ss_pred hhc--CCcEEEEccCChhcccHHHHccCC---CCeEEEEecCCCC--CCChhHHHHh
Q 037949 116 VVS--EAGLFVTTTENADIIMVRHMKQMK---NAAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 116 ~~~--~aDvvi~a~G~~~~i~~~~l~~l~---~g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
+++ ++|+++-+++.+++++.+.++.|. +.-+|.-.+-... |+..++...|
T Consensus 100 ~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~pe~a~~~ 156 (279)
T cd05312 100 VVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTSKAECTAEDAYKW 156 (279)
T ss_pred HHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCccccCHHHHHHh
Confidence 888 899999999888899999999997 6777776665543 6776666554
No 372
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00046 Score=59.05 Aligned_cols=39 Identities=31% Similarity=0.369 Sum_probs=34.9
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
.++|++++|+|+ |.||..+++.+...|++|+++++++..
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 467999999997 599999999999999999999988754
No 373
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.52 E-value=0.00073 Score=59.61 Aligned_cols=92 Identities=18% Similarity=0.197 Sum_probs=69.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccCH------Hh---hh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLTR------ED---VV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~~------~~---~~--~~aDvvi~a~ 127 (243)
..+|++++|.|++ .+|+.+++.++..|++|++++.++.+...+...+.. +.+. .. .. .+.|+++++.
T Consensus 164 ~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 243 (342)
T cd08266 164 LRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHV 243 (342)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence 3578999999997 899999999999999999999888876665554532 1111 11 11 2689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... ++ ..++.++++|.++++|...
T Consensus 244 g~~~-~~-~~~~~l~~~G~~v~~~~~~ 268 (342)
T cd08266 244 GAAT-WE-KSLKSLARGGRLVTCGATT 268 (342)
T ss_pred cHHH-HH-HHHHHhhcCCEEEEEecCC
Confidence 8643 43 4688899999999998653
No 374
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.52 E-value=0.00052 Score=59.77 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=63.2
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC---EEEEEeCCchhHHHHhh-c-CCcc-cCHHhhhcCCcEEEEccCChhcccHHHHc
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGA---RVMGTEIDLICALQALT-E-GIPV-LTREDVVSEAGLFVTTTENADIIMVRHMK 139 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~~~r~~~a~~-~-G~~~-~~~~~~~~~aDvvi~a~G~~~~i~~~~l~ 139 (243)
++.|+|+|.||..+++.+...|. .+.++++++++...... . +..+ .+..+.++++|+|+.|+.. ..+. +.+.
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p-~~~~-~vl~ 79 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRP-QIAE-EVLR 79 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCH-HHHH-HHHH
Confidence 58999999999999999998885 35788998887644433 3 3443 3566777889999999863 2222 2222
Q ss_pred --cCCCCeEEEEecCCCCCCChhHHHH
Q 037949 140 --QMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 140 --~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.++++.+|+.+..+ ++.+.+..
T Consensus 80 ~l~~~~~~~vis~~ag---~~~~~l~~ 103 (258)
T PRK06476 80 ALRFRPGQTVISVIAA---TDRAALLE 103 (258)
T ss_pred HhccCCCCEEEEECCC---CCHHHHHH
Confidence 24567778775533 44444443
No 375
>PLN02253 xanthoxin dehydrogenase
Probab=97.52 E-value=0.0004 Score=60.52 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=35.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.|++++|+|+. .||+.+++.+...|++|+++++++...
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~ 55 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG 55 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3678999999976 899999999999999999999876543
No 376
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.52 E-value=0.00039 Score=59.25 Aligned_cols=36 Identities=31% Similarity=0.556 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ .||+.+|+.|...|++|+++++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 579999999985 999999999999999999998865
No 377
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00028 Score=63.10 Aligned_cols=36 Identities=39% Similarity=0.498 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|++ +||+.+|+.|...|++|++++++.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 679999999997 899999999999999999998874
No 378
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.51 E-value=0.00082 Score=66.96 Aligned_cols=122 Identities=20% Similarity=0.242 Sum_probs=88.5
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCC------------chhHHH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEID------------LICALQ 102 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~------------~~r~~~ 102 (243)
|..+|++-....++.. ..+..+...++++.|+|.-|.++++.+...|. +++++|.. +.+...
T Consensus 159 DD~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~~~k~~~ 238 (752)
T PRK07232 159 DDQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMDEWKAAY 238 (752)
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCCeecCCCcccccHHHHHH
Confidence 3444555554444432 23445788999999999999999999999999 78888854 222222
Q ss_pred HhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 103 ALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 103 a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
|.. ....++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|++.+....|
T Consensus 239 a~~--~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~ 298 (752)
T PRK07232 239 AVD--TDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALANPDPEITPEEAKAV 298 (752)
T ss_pred hcc--CCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHHh
Confidence 222 123468899999999999987 789999999999888888776766567777766554
No 379
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=97.51 E-value=0.00046 Score=59.88 Aligned_cols=91 Identities=23% Similarity=0.200 Sum_probs=68.2
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh--hcCCcEEEEccCChh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV--VSEAGLFVTTTENAD 131 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~--~~~aDvvi~a~G~~~ 131 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++.++ +...+...|.. +++ ..+. -.+.|++++++|...
T Consensus 142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~ 220 (309)
T cd05289 142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGET 220 (309)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHH
Confidence 357999999997 8999999999999999998887766 55555555642 221 1111 135899999998763
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. ..++.+++++.++.+|...
T Consensus 221 -~~-~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 221 -LA-RSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred -HH-HHHHHHhcCcEEEEEcCCC
Confidence 43 5788999999999998764
No 380
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=97.51 E-value=0.00033 Score=61.24 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=59.0
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEE-EEeC----------CchhHHH---Hh-hc------------CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVM-GTEI----------DLICALQ---AL-TE------------GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~-v~d~----------~~~r~~~---a~-~~------------G~~~~ 111 (243)
+..++|++|+|.|+|.+|+.+|+.|...|++|+ ++|. |...+.. .. .. +.+.+
T Consensus 33 ~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~~ 112 (254)
T cd05313 33 NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYF 112 (254)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEEe
Confidence 346899999999999999999999999999988 6772 1111100 00 01 12223
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGH 152 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~ 152 (243)
+.++.+ ..|||++.|. ....|+.+..+.+ ++++.+|.-|.
T Consensus 113 ~~~~~~~~~~DIliPcA-l~~~I~~~na~~i~~~~ak~I~EgA 154 (254)
T cd05313 113 EGKKPWEVPCDIAFPCA-TQNEVDAEDAKLLVKNGCKYVAEGA 154 (254)
T ss_pred CCcchhcCCCcEEEecc-ccccCCHHHHHHHHHcCCEEEEeCC
Confidence 333333 4799999985 3345776656655 33566665443
No 381
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.51 E-value=0.00077 Score=59.72 Aligned_cols=91 Identities=13% Similarity=0.117 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC-----HHh--hh-cCCcEEEEccCChh
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT-----RED--VV-SEAGLFVTTTENAD 131 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~-----~~~--~~-~~aDvvi~a~G~~~ 131 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++. +.+...+...|+..+. ..+ .. .+.|++++|+|...
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~ 215 (331)
T cd08273 137 VLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGATPIDYRTKDWLPAMLTPGGVDVVFDGVGGES 215 (331)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeEEcCCCcchhhhhccCCCceEEEECCchHH
Confidence 457999999997 89999999999999999988876 6666666666743211 111 11 35899999998876
Q ss_pred cccHHHHccCCCCeEEEEecCCC
Q 037949 132 IIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 132 ~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+. ..++.++++|+++.+|...
T Consensus 216 -~~-~~~~~l~~~g~~v~~g~~~ 236 (331)
T cd08273 216 -YE-ESYAALAPGGTLVCYGGNS 236 (331)
T ss_pred -HH-HHHHHhcCCCEEEEEccCC
Confidence 43 5788999999999998764
No 382
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.50 E-value=0.00059 Score=58.63 Aligned_cols=37 Identities=30% Similarity=0.311 Sum_probs=33.3
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+|+++|+|++ .||..+++.|...|++|+++++++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~ 39 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA 39 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 6899999986 899999999999999999999987654
No 383
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.49 E-value=0.0006 Score=64.76 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=65.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc----CCc---ccCHHhhhc---CCcEEEEccCCh----
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE----GIP---VLTREDVVS---EAGLFVTTTENA---- 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~----G~~---~~~~~~~~~---~aDvvi~a~G~~---- 130 (243)
.++.|+|.|.+|..+|+.+...|.+|.++|+++.+.+..... |.. +.++++++. .+|+|+.+....
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~ 81 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVD 81 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHH
Confidence 369999999999999999999999999999999886444332 432 335666664 589887774332
Q ss_pred hcccHHHHccCCCCeEEEEecCC
Q 037949 131 DIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 131 ~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+++ .....+++|.++++.|-.
T Consensus 82 ~vi~-~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 82 ETID-NLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHH-HHHhhCCCCCEEEECCCC
Confidence 3343 356678899999998765
No 384
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.49 E-value=0.0004 Score=59.79 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=33.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
.+.|++++|+|++ .||..+++.+...|++|++++++
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999987 89999999999999999999887
No 385
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00048 Score=59.76 Aligned_cols=40 Identities=28% Similarity=0.238 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|++ .||..+++.|...|++|+++++++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~ 46 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV 46 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3679999999984 999999999999999999999987654
No 386
>PRK05855 short chain dehydrogenase; Validated
Probab=97.48 E-value=0.00035 Score=66.69 Aligned_cols=41 Identities=34% Similarity=0.499 Sum_probs=35.8
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
...+++++|+|+ |.||+.+|+.|...|++|+++++++.++.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~ 353 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAE 353 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 357899999997 59999999999999999999999876543
No 387
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.48 E-value=0.00052 Score=58.95 Aligned_cols=40 Identities=33% Similarity=0.411 Sum_probs=35.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|+ |.||+.+++.|...|++|+++++++.+..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~ 44 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR 44 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 56899999997 49999999999999999999999887653
No 388
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.48 E-value=0.00052 Score=60.99 Aligned_cols=68 Identities=26% Similarity=0.264 Sum_probs=49.7
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c----CC---cccCH---HhhhcCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E----GI---PVLTR---EDVVSEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~----G~---~~~~~---~~~~~~aDvvi~a~G 128 (243)
...+++|+|+|+|+.+++++..|...|+ +|+++++++++.+.... . +. ...+. .+....+|+|++||.
T Consensus 124 ~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred CcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCC
Confidence 3578999999999999999999999998 89999999887543221 1 11 11221 223457899999973
No 389
>PRK06128 oxidoreductase; Provisional
Probab=97.48 E-value=0.00034 Score=62.01 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+.||+++|+|+. .||+.+++.|...|++|+++.+++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 678999999985 899999999999999998877654
No 390
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.48 E-value=0.00065 Score=59.26 Aligned_cols=91 Identities=18% Similarity=0.237 Sum_probs=69.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HH----hhh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RE----DVV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~----~~~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ .. +.. ++.|++++|+
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVL 221 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence 357999999996 7999999999999999999999988877666666653 111 11 111 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
|... +. ..++.++++|.++++|..
T Consensus 222 ~~~~-~~-~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 222 ANVN-LA-KDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred chHH-HH-HHHHhhCCCCEEEEEeec
Confidence 8764 32 467888999999999874
No 391
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=97.48 E-value=0.00062 Score=61.86 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=59.8
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEc---cCCh-hcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTT---TENA-DIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a---~G~~-~~i~~ 135 (243)
.+.+++|+|+|+|-+|..+++.|+..|+ +|+++.++..+.... +. ....-+....+||||.| |+++ +.++.
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~---~~-~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~ 246 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYR---TV-VREELSFQDPYDVIFFGSSESAYAFPHLSW 246 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchh---hh-hhhhhhcccCCCEEEEcCCcCCCCCceeeH
Confidence 4789999999999999999999999997 799998876431100 00 00011223579999987 4444 34555
Q ss_pred HHHccCCCCeEEEEecCCC
Q 037949 136 RHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~~~ 154 (243)
+.+...++ -.++..+.+.
T Consensus 247 ~~~~~~~~-r~~iDLAvPR 264 (338)
T PRK00676 247 ESLADIPD-RIVFDFNVPR 264 (338)
T ss_pred HHHhhccC-cEEEEecCCC
Confidence 55554332 3778877763
No 392
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.47 E-value=0.0005 Score=65.13 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=51.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.+++|+|+|+|++|+.+|..|+..|.+|+++|.++. ........|+++. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 219 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDIS 219 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCccC
Confidence 589999999999999999999999999999987652 2233445675421 1
Q ss_pred HHhhhcCCcEEEEccCChh
Q 037949 113 REDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~~ 131 (243)
.++....+|.|+.|+|...
T Consensus 220 ~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 220 LDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 2333357999999998754
No 393
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.47 E-value=0.0005 Score=59.87 Aligned_cols=40 Identities=33% Similarity=0.382 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~ 47 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA 47 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4689999999985 999999999999999999999987644
No 394
>PRK12861 malic enzyme; Reviewed
Probab=97.47 E-value=0.00087 Score=66.82 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=86.2
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeC------------CchhHHH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEI------------DLICALQ 102 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~------------~~~r~~~ 102 (243)
|..+|++-....++.. ..+..+...++++.|+|.-|.+++..+...|+ +++++|. ++.+...
T Consensus 163 DD~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~~l~~~k~~~ 242 (764)
T PRK12861 163 DDQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIEGVVYRGRTTLMDPDKERF 242 (764)
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcccCCHHHHHH
Confidence 3444555544444432 23445788999999999999999999999999 7999983 3333333
Q ss_pred HhhcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHH
Q 037949 103 ALTEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDL 162 (243)
Q Consensus 103 a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l 162 (243)
|... ...++.++++++|+++-+++ +++++.+.++.|.+..+|.-.+-...|+..+..
T Consensus 243 a~~~--~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLsNPtpE~~pe~a 299 (764)
T PRK12861 243 AQET--DARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALANPTPEIFPELA 299 (764)
T ss_pred Hhhc--CCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECCCCCccCCHHHH
Confidence 4332 23468899999999999986 789999999999888887766665556665544
No 395
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.00053 Score=60.93 Aligned_cols=90 Identities=26% Similarity=0.269 Sum_probs=60.3
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHhh-c---CC--cccCHHhh--hcCCcEEEEccCC--
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQALT-E---GI--PVLTREDV--VSEAGLFVTTTEN-- 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~~-~---G~--~~~~~~~~--~~~aDvvi~a~G~-- 129 (243)
..+|++++|+|+|+.+++++..|+..|+ +|+|++++.+|..+..+ . +. ......+. ...+|++|+||+.
T Consensus 123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm 202 (283)
T COG0169 123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGM 202 (283)
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCC
Confidence 4568999999999999999999999997 89999999988644332 1 11 11222211 1259999999742
Q ss_pred h----h-cccHHHHccCCCCeEEEEecCC
Q 037949 130 A----D-IIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 130 ~----~-~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
. . .+. .+.++++.++..+=..
T Consensus 203 ~~~~~~~~~~---~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 203 AGPEGDSPVP---AELLPKGAIVYDVVYN 228 (283)
T ss_pred CCCCCCCCCc---HHhcCcCCEEEEeccC
Confidence 1 1 121 3456677777665443
No 396
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00044 Score=58.94 Aligned_cols=39 Identities=33% Similarity=0.474 Sum_probs=34.8
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|+ |.||..+++.+...|++|+++++++...
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~ 43 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA 43 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 57899999998 6999999999999999999999986543
No 397
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.46 E-value=0.00066 Score=58.35 Aligned_cols=37 Identities=38% Similarity=0.527 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+++++++|+|++ .||+.+++.|...|++|+++++++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~ 43 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL 43 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH
Confidence 678999999986 8999999999999999999998753
No 398
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00063 Score=59.15 Aligned_cols=37 Identities=27% Similarity=0.272 Sum_probs=32.8
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
|+++|+|++ .||..+++.+...|++|+++++++.+..
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 39 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE 39 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 689999975 9999999999999999999999876543
No 399
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.45 E-value=0.00097 Score=58.95 Aligned_cols=83 Identities=13% Similarity=0.068 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc------------cCHHhhhcCCcEEEEccCChhc-
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV------------LTREDVVSEAGLFVTTTENADI- 132 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~------------~~~~~~~~~aDvvi~a~G~~~~- 132 (243)
++.|+|+|.+|..+|..|...|.+|+++++++.+.+.....|... .+..+ ...+|+|+.|+.....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~~~~~ 80 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKAYQLP 80 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEecccccHH
Confidence 589999999999999999999999999999877665544445421 11233 3789999999765432
Q ss_pred --ccHHHHccCCCCeEEEEe
Q 037949 133 --IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 133 --i~~~~l~~l~~g~~vvnv 150 (243)
+. ..-..+.++..++..
T Consensus 81 ~~~~-~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 81 AALP-SLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHH-HHhhhcCCCCEEEEe
Confidence 21 122234455566653
No 400
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00049 Score=59.57 Aligned_cols=38 Identities=34% Similarity=0.469 Sum_probs=33.3
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.|...|++|++.++++.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 46789999975 899999999999999999999887543
No 401
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.45 E-value=0.00098 Score=56.49 Aligned_cols=87 Identities=22% Similarity=0.171 Sum_probs=59.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--hcCCc--ccCHHhhhcCCcEEEEccCCh---hcccHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL--TEGIP--VLTREDVVSEAGLFVTTTENA---DIIMVRH 137 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~--~~G~~--~~~~~~~~~~aDvvi~a~G~~---~~i~~~~ 137 (243)
++++|+|.|.||.++|.++...|.+|++..++.+....+. ..+.. ....+++.+.+|||+.++.-. .++ .+.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~-~~l 80 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVL-AEL 80 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHH-HHH
Confidence 5789999999999999999999999999855444322322 23332 345678888999999987543 223 233
Q ss_pred HccCCCCeEEEEecCC
Q 037949 138 MKQMKNAAIVCNIGHF 153 (243)
Q Consensus 138 l~~l~~g~~vvnvg~~ 153 (243)
.+.+. |-+|+.+...
T Consensus 81 ~~~~~-~KIvID~tnp 95 (211)
T COG2085 81 RDALG-GKIVIDATNP 95 (211)
T ss_pred HHHhC-CeEEEecCCC
Confidence 33343 6788876553
No 402
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=97.45 E-value=0.00086 Score=60.37 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchhHH-----HHhhcCCcc-cCHHhhhcCCcEEEEccCChhccc---HHHHccCCCCe
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLICAL-----QALTEGIPV-LTREDVVSEAGLFVTTTENADIIM---VRHMKQMKNAA 145 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r~~-----~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~~i~---~~~l~~l~~g~ 145 (243)
-|..+|..|...|.+|+++|+++.+.. .....|+.. .+..++.+++|+||.|..+...+. ...+..+++|.
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 589999999999999999999876432 344567764 457788899999999987654331 23467789999
Q ss_pred EEEEecCCC
Q 037949 146 IVCNIGHFD 154 (243)
Q Consensus 146 ~vvnvg~~~ 154 (243)
++++.+..+
T Consensus 111 IVID~STIs 119 (341)
T TIGR01724 111 VICNTCTVS 119 (341)
T ss_pred EEEECCCCC
Confidence 999987653
No 403
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0005 Score=58.83 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=35.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|++ .||..+++.+...|++|+++++++.++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~ 45 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC 45 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999999977 899999999999999999999987654
No 404
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.43 E-value=0.0011 Score=57.84 Aligned_cols=92 Identities=18% Similarity=0.202 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.|+ |.+|+.+++.++.+|++|+++..++.+...+...|.+ +.+ ..+. . .+.|++++++
T Consensus 137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 216 (325)
T TIGR02824 137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIV 216 (325)
T ss_pred CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECC
Confidence 357999999996 7999999999999999999998888776666555653 111 1111 1 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|.. .+. ..+..++++|.++.+|..+
T Consensus 217 ~~~-~~~-~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 217 GGS-YLN-RNIKALALDGRIVQIGFQG 241 (325)
T ss_pred chH-HHH-HHHHhhccCcEEEEEecCC
Confidence 864 343 4688889999999988653
No 405
>PRK09414 glutamate dehydrogenase; Provisional
Probab=97.42 E-value=0.00081 Score=63.30 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=61.1
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEEE-e----------CCchhHHHHhhc--C----------CcccCHHh
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMGT-E----------IDLICALQALTE--G----------IPVLTRED 115 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d----------~~~~r~~~a~~~--G----------~~~~~~~~ 115 (243)
+..+.|++|+|.|+|.+|+.+|+.|..+|++|+.+ | +|...+...... | .+.++.++
T Consensus 227 ~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~~~~ 306 (445)
T PRK09414 227 GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLEGGS 306 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecCCcc
Confidence 44689999999999999999999999999998775 8 666544322211 1 11122223
Q ss_pred hh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 116 VV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 116 ~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
.+ .++||++.|+- .+.++.+....+ .+++.+|.-|..
T Consensus 307 i~~~d~DVliPaAl-~n~It~~~a~~i~~~~akiIvEgAN 345 (445)
T PRK09414 307 PWSVPCDIALPCAT-QNELDEEDAKTLIANGVKAVAEGAN 345 (445)
T ss_pred ccccCCcEEEecCC-cCcCCHHHHHHHHHcCCeEEEcCCC
Confidence 22 37999999964 344655544444 336666654443
No 406
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.41 E-value=0.00038 Score=54.65 Aligned_cols=87 Identities=24% Similarity=0.298 Sum_probs=51.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEE-eCCchhHHHHhhc-C-CcccCHHhhhcCCcEEEEccCChhc--ccHHHH
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGT-EIDLICALQALTE-G-IPVLTREDVVSEAGLFVTTTENADI--IMVRHM 138 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~-d~~~~r~~~a~~~-G-~~~~~~~~~~~~aDvvi~a~G~~~~--i~~~~l 138 (243)
--++.|||+|.+|..+++.|...|.+|..+ .+++...+.+... + ..+.++.+.+..+|+++.++....+ +- +.+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va-~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVA-EQL 88 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHH-HHH
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHH-HHH
Confidence 458999999999999999999999988665 4555444444432 2 2345667788899999999765432 11 123
Q ss_pred cc---CCCCeEEEEec
Q 037949 139 KQ---MKNAAIVCNIG 151 (243)
Q Consensus 139 ~~---l~~g~~vvnvg 151 (243)
.. .+++.+|+-++
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 32 46777777554
No 407
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00079 Score=58.78 Aligned_cols=38 Identities=32% Similarity=0.269 Sum_probs=34.1
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.|...|++|+++++++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~ 41 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR 41 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH
Confidence 46889999985 899999999999999999999988764
No 408
>PRK07985 oxidoreductase; Provisional
Probab=97.40 E-value=0.00048 Score=61.00 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=32.6
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++|++++|+|++ .||+.+|+.|...|++|++.+++.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~ 83 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV 83 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc
Confidence 3689999999986 899999999999999999887643
No 409
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.40 E-value=0.00015 Score=62.56 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
+++++++|+|++ .||+.+++.+...|++|++..++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999987 899999999999999998876643
No 410
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0005 Score=59.04 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=35.4
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.++|++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~ 44 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD 44 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH
Confidence 4789999999976 899999999999999999998877643
No 411
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.40 E-value=0.00067 Score=63.56 Aligned_cols=68 Identities=25% Similarity=0.260 Sum_probs=49.8
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-H----HHHhhcCCccc--C-HHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-A----LQALTEGIPVL--T-REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-~----~~a~~~G~~~~--~-~~~~~~~aDvvi~a~G~ 129 (243)
+.+|+|+|+|+|++|+.+|..|...|++|+++|.++.. . ......|..+. + .++...++|+|+.++|.
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence 46899999999999999999999999999999997532 2 11122354322 1 23344679999988874
No 412
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.39 E-value=0.0017 Score=56.82 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=69.3
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HH----hhh--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----RE----DVV--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~----~~~--~~aDvvi~a~ 127 (243)
..++++++|.|+ |.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ .. +.. ...|+++++.
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (328)
T cd08268 142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPV 221 (328)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECC
Confidence 357899999998 8999999999999999999998888776655555542 211 11 112 2589999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
|... .. ..++.++++|+++..|..+
T Consensus 222 ~~~~-~~-~~~~~l~~~g~~v~~g~~~ 246 (328)
T cd08268 222 GGPQ-FA-KLADALAPGGTLVVYGALS 246 (328)
T ss_pred chHh-HH-HHHHhhccCCEEEEEEeCC
Confidence 8743 33 4688899999999988653
No 413
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=97.39 E-value=0.00058 Score=68.06 Aligned_cols=83 Identities=18% Similarity=0.222 Sum_probs=57.7
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c------------c-cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P------------V-LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------------~-~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. . . .+. +.+++
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 392 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPTLDY-AGFER 392 (715)
T ss_pred ceEEEECCchhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcC
Confidence 68999999999999999999999999999999987644321 121 0 0 011 33579
Q ss_pred CcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||..- + .++ .+.-+.+++++++..
T Consensus 393 aDlViEav~E~l~~K~~vf-~~l~~~~~~~~ilas 426 (715)
T PRK11730 393 VDVVVEAVVENPKVKAAVL-AEVEQKVREDTILAS 426 (715)
T ss_pred CCEEEecccCcHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 9999999632 1 223 222345578887774
No 414
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.39 E-value=0.00093 Score=57.38 Aligned_cols=40 Identities=30% Similarity=0.488 Sum_probs=35.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.+++++|+|+. .||+.+++.+...|++|+++++++.+.
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~ 48 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA 48 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 3679999999987 899999999999999999998877654
No 415
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0011 Score=56.60 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=33.0
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++|+|+. .||+.+++.|...|++|+++++++.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~ 39 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLD 39 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 679999965 9999999999999999999999887653
No 416
>PRK10637 cysG siroheme synthase; Provisional
Probab=97.38 E-value=0.00053 Score=64.90 Aligned_cols=88 Identities=19% Similarity=0.281 Sum_probs=56.6
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeC--CchhHHHHhhcC-CcccC---HHhhhcCCcEEEEccCChhccc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEI--DLICALQALTEG-IPVLT---REDVVSEAGLFVTTTENADIIM 134 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~--~~~r~~~a~~~G-~~~~~---~~~~~~~aDvvi~a~G~~~~i~ 134 (243)
.+.|++|+|+|+|.++..=++.|...|++|+|+-+ +++-. .....| +.... ..+.++++++|+.||+.+. ++
T Consensus 9 ~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~-~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n 86 (457)
T PRK10637 9 QLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFT-AWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA-VN 86 (457)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHH-HHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH-Hh
Confidence 47899999999999999989999999999988733 33322 112222 22111 1344678999999987754 34
Q ss_pred HHHHccCCCCeEEEEe
Q 037949 135 VRHMKQMKNAAIVCNI 150 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnv 150 (243)
.+.....+..++++|+
T Consensus 87 ~~i~~~a~~~~~lvN~ 102 (457)
T PRK10637 87 QRVSEAAEARRIFCNV 102 (457)
T ss_pred HHHHHHHHHcCcEEEE
Confidence 3333333444555554
No 417
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.38 E-value=0.00088 Score=63.60 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=64.2
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhc---C--Cc-ccCHHhhh---cCCcEEEEccCCh----hcc
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTE---G--IP-VLTREDVV---SEAGLFVTTTENA----DII 133 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~---G--~~-~~~~~~~~---~~aDvvi~a~G~~----~~i 133 (243)
+.|||.|.+|..+|+.+...|.+|+++|+++.+.+...+. | +. ..++++.+ +.+|+|+.+.... .++
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~Vi 81 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDAVI 81 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHHHH
Confidence 7899999999999999999999999999999987655544 2 22 23455544 4689988886542 334
Q ss_pred cHHHHccCCCCeEEEEecCC
Q 037949 134 MVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~~~~l~~l~~g~~vvnvg~~ 153 (243)
+ .....+++|.++++.|-.
T Consensus 82 ~-~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 82 N-QLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred H-HHHhhCCCCCEEEECCCc
Confidence 3 345667889999998754
No 418
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00089 Score=56.76 Aligned_cols=40 Identities=33% Similarity=0.538 Sum_probs=35.7
Q ss_pred cccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++++|+|+ |.||+.+++.+...|++|+++++++++.
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~ 46 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL 46 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 367899999998 5999999999999999999999987654
No 419
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=97.38 E-value=0.00068 Score=67.56 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=57.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-cc-------------cCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-PV-------------LTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~~-------------~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. .. .+. +.+.+
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 392 (714)
T TIGR02437 314 KQAAVLGAGIMGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSY-AGFDN 392 (714)
T ss_pred ceEEEECCchHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcC
Confidence 68999999999999999999999999999999987654321 111 00 011 23579
Q ss_pred CcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||.-- + .++ .+.-..+++++++..
T Consensus 393 aDlViEav~E~l~~K~~vf-~~l~~~~~~~~ilas 426 (714)
T TIGR02437 393 VDIVVEAVVENPKVKAAVL-AEVEQHVREDAILAS 426 (714)
T ss_pred CCEEEEcCcccHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 9999999632 2 223 222345588888874
No 420
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.38 E-value=0.00043 Score=66.98 Aligned_cols=66 Identities=21% Similarity=0.163 Sum_probs=53.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hh-hhcCCcEEEEccCCh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---ED-VVSEAGLFVTTTENA 130 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~-~~~~aDvvi~a~G~~ 130 (243)
.+++|+|+|++|+.+++.|+..|.+|+++|.|+++.+.+.+.|+.++ | . ++ -++++|.++.++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 68999999999999999999999999999999999888887776532 2 1 11 146899887776653
No 421
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.38 E-value=0.00077 Score=64.94 Aligned_cols=93 Identities=25% Similarity=0.216 Sum_probs=59.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHh-hcCCcccCHHhh----hcCCcEEEEccCC--hhcc
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQAL-TEGIPVLTREDV----VSEAGLFVTTTEN--ADII 133 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~-~~G~~~~~~~~~----~~~aDvvi~a~G~--~~~i 133 (243)
.+.+++|+|+|+|++|++++..|...|++|++++++.++..... ..+....+..+. ...+|++++|++. .+..
T Consensus 376 ~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~ 455 (529)
T PLN02520 376 PLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNV 455 (529)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCC
Confidence 46789999999999999999999999999999999877654332 223222333221 1357888888632 1111
Q ss_pred cH--HHHccCCCCeEEEEecCC
Q 037949 134 MV--RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 134 ~~--~~l~~l~~g~~vvnvg~~ 153 (243)
+. -....+++...+..+-..
T Consensus 456 ~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 456 DETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCcccHhhCCCCCEEEEeccC
Confidence 00 012345666666665544
No 422
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=97.38 E-value=0.0013 Score=58.56 Aligned_cols=104 Identities=15% Similarity=0.100 Sum_probs=80.4
Q ss_pred ccchhhhhhhhccccccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCcc-c-----CHHhhh-
Q 037949 47 RHSLPDGLMRATDITIAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPV-L-----TREDVV- 117 (243)
Q Consensus 47 ~~~~~~av~~~~~~~l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~-~-----~~~~~~- 117 (243)
+...+.++.+-. ...+|++|+|-++ |++|..+.+.++..|++|+.+--++++.....+ .|++. + ++.+.+
T Consensus 135 G~TAY~gLl~ig-qpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~ 213 (340)
T COG2130 135 GLTAYFGLLDIG-QPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALK 213 (340)
T ss_pred hHHHHHHHHHhc-CCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHH
Confidence 344566666543 3578999999995 699999999999999999999888888777766 67752 2 333332
Q ss_pred ----cCCcEEEEccCChhcccHHHHccCCCCeEEEEecCC
Q 037949 118 ----SEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 118 ----~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
++.|+.||++|.+- ++ +.+..|...++++.+|.-
T Consensus 214 ~a~P~GIDvyfeNVGg~v-~D-Av~~~ln~~aRi~~CG~I 251 (340)
T COG2130 214 EACPKGIDVYFENVGGEV-LD-AVLPLLNLFARIPVCGAI 251 (340)
T ss_pred HHCCCCeEEEEEcCCchH-HH-HHHHhhccccceeeeeeh
Confidence 57899999998853 54 579999999999999864
No 423
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.37 E-value=0.0016 Score=54.95 Aligned_cols=35 Identities=23% Similarity=0.476 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
+..++|+|+|+|.+|..+|..|...|. +++++|.|
T Consensus 19 L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 678999999999999999999999999 79999988
No 424
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.37 E-value=0.00071 Score=59.47 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHhC--CCE-EEEEeCCchhHHHHhh-cCCc-ccCHHhhhcCCcEEEEccCChhcccHHHHcc
Q 037949 66 IAVDCGHGDVGRGCAAALKAV--GAR-VMGTEIDLICALQALT-EGIP-VLTREDVVSEAGLFVTTTENADIIMVRHMKQ 140 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~--Ga~-V~v~d~~~~r~~~a~~-~G~~-~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~ 140 (243)
+++|+|+|.||..+++.+... +.+ +.++|+++.+.....+ .+.. ..+.++.+.++|+|++|++..... .-....
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~~~~~ell~~~DvVvi~a~~~~~~-~~~~~a 81 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKACLSIDELVEDVDLVVECASVNAVE-EVVPKS 81 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeECCHHHHhcCCCEEEEcCChHHHH-HHHHHH
Confidence 699999999999999998875 465 5578999887644332 3443 345677778899999998654332 223344
Q ss_pred CCCCeEEEEecC
Q 037949 141 MKNAAIVCNIGH 152 (243)
Q Consensus 141 l~~g~~vvnvg~ 152 (243)
++.|.-++..+.
T Consensus 82 l~~Gk~Vvv~s~ 93 (265)
T PRK13304 82 LENGKDVIIMSV 93 (265)
T ss_pred HHcCCCEEEEch
Confidence 455555554443
No 425
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.37 E-value=0.0014 Score=56.51 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=32.3
Q ss_pred EEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 66 IAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 66 ~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++|+|++ .||+.+++.+...|++|+++++++.++.
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 38 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLE 38 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 68999986 8999999999999999999999877653
No 426
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00076 Score=58.08 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=33.7
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++|+|+. .||+.+++.|...|++|+++++++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~ 40 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ 40 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4789999965 9999999999999999999999887653
No 427
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00075 Score=57.32 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=33.9
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+|+++|+|+ |.||+.+++.|...|++|+++++++.+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~ 43 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL 43 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4689999997 6999999999999999999999987654
No 428
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00047 Score=58.57 Aligned_cols=40 Identities=23% Similarity=0.190 Sum_probs=35.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++|++++|+|++ .||+.+++.+...|++|+++++++.+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~ 44 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE 44 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHH
Confidence 678999999975 8999999999999999999999887643
No 429
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.00044 Score=59.65 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=30.8
Q ss_pred ccCcEEEEEcCC---hHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGHG---DVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~G---~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
++||+++|+|++ .||+.+|+.+...|++|+++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 679999999995 7999999999999999998754
No 430
>PRK04148 hypothetical protein; Provisional
Probab=97.33 E-value=0.00084 Score=53.12 Aligned_cols=70 Identities=21% Similarity=0.214 Sum_probs=54.9
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H-HhhhcCCcEEEEccCChhcc
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R-EDVVSEAGLFVTTTENADII 133 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~-~~~~~~aDvvi~a~G~~~~i 133 (243)
++++++++|+| -|..+|..|...|.+|+++|.++.+.+.+...+.+++ + + -+.-+++|++.++-..+++.
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHH
Confidence 56889999999 8998999999999999999999998877777665422 2 2 23457899998886555543
No 431
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.33 E-value=0.00076 Score=57.44 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=61.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCc-hhHHHHhhc-CCcccC--H-HhhhcCCcEEEEccCChhcccH
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDL-ICALQALTE-GIPVLT--R-EDVVSEAGLFVTTTENADIIMV 135 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~-~r~~~a~~~-G~~~~~--~-~~~~~~aDvvi~a~G~~~~i~~ 135 (243)
.+.|++|+|+|+|.+|..=++.+...|++|+|+-.+. ......... +..... . .+.+.++++|+.||.++. ++.
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~-ln~ 87 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEE-LNE 87 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHH-HHH
Confidence 4789999999999999999999999999999985443 222111122 221111 1 122345999999988765 555
Q ss_pred HHHccCCCCeEEEEecC
Q 037949 136 RHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 136 ~~l~~l~~g~~vvnvg~ 152 (243)
......++-++++|+.-
T Consensus 88 ~i~~~a~~~~i~vNv~D 104 (210)
T COG1648 88 RIAKAARERRILVNVVD 104 (210)
T ss_pred HHHHHHHHhCCceeccC
Confidence 56666677778888643
No 432
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00091 Score=59.11 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=33.8
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|++ .||..+++.+...|++|+++++++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~ 81 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH 81 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4679999999975 8999999999999999999988753
No 433
>PRK14030 glutamate dehydrogenase; Provisional
Probab=97.33 E-value=0.00092 Score=62.85 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=60.6
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCCEEEE--------Ee---CCchhH---HHHhh------------c-CCccc
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGARVMG--------TE---IDLICA---LQALT------------E-GIPVL 111 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v--------~d---~~~~r~---~~a~~------------~-G~~~~ 111 (243)
+..+.|++|+|-|+|.+|..+|+.|...|++|++ +| +|..++ ...+. . |.+.+
T Consensus 223 g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i 302 (445)
T PRK14030 223 GIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF 302 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc
Confidence 4468999999999999999999999999999988 67 454442 11111 0 22222
Q ss_pred CHHhhh-cCCcEEEEccCChhcccHHHHccC-CCCeEEEEecCC
Q 037949 112 TREDVV-SEAGLFVTTTENADIIMVRHMKQM-KNAAIVCNIGHF 153 (243)
Q Consensus 112 ~~~~~~-~~aDvvi~a~G~~~~i~~~~l~~l-~~g~~vvnvg~~ 153 (243)
+.++.+ ..|||.+.|. ..+.|+.+..+.+ +.++.+|.=|..
T Consensus 303 ~~~~~~~~~cDVliPcA-l~n~I~~~na~~l~~~~ak~V~EgAN 345 (445)
T PRK14030 303 AGKKPWEQKVDIALPCA-TQNELNGEDADKLIKNGVLCVAEVSN 345 (445)
T ss_pred CCccceeccccEEeecc-ccccCCHHHHHHHHHcCCeEEEeCCC
Confidence 333332 3799999885 3345665555545 445666654443
No 434
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.00093 Score=61.81 Aligned_cols=83 Identities=19% Similarity=0.296 Sum_probs=55.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch------------------hHHHHh-hcCCcccCHHhhh-cCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI------------------CALQAL-TEGIPVLTREDVV-SEA 120 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~------------------r~~~a~-~~G~~~~~~~~~~-~~a 120 (243)
.+.|++|+|-|+|++|.-+|+.+...|++|++++-+.. +..... ..|.+.++.++.+ .+|
T Consensus 204 ~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~~~~~c 283 (411)
T COG0334 204 DLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEELLEVDC 283 (411)
T ss_pred CcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEccccccccccC
Confidence 37999999999999999999999999999888755443 111111 1233333334433 379
Q ss_pred cEEEEccCChhcccHHHHccCCCC
Q 037949 121 GLFVTTTENADIIMVRHMKQMKNA 144 (243)
Q Consensus 121 Dvvi~a~G~~~~i~~~~l~~l~~g 144 (243)
||.+.|. ..+.|+.+..+.++..
T Consensus 284 DIl~PcA-~~n~I~~~na~~l~ak 306 (411)
T COG0334 284 DILIPCA-LENVITEDNADQLKAK 306 (411)
T ss_pred cEEcccc-cccccchhhHHHhhhc
Confidence 9998884 3344666666666544
No 435
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.32 E-value=0.0009 Score=65.88 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=51.5
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.|++|+|||+|+.|+.+|..|+..|.+|+++|..+. +.......|+++. +
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 589999999999999999999999999999987763 2223344565421 2
Q ss_pred HHhhhcCCcEEEEccCCh
Q 037949 113 REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~ 130 (243)
+.+...+.|.|+.++|..
T Consensus 389 ~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 334446799999999864
No 436
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.00082 Score=57.76 Aligned_cols=38 Identities=34% Similarity=0.386 Sum_probs=34.2
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
.++|++++|+|+. .||..+++.|...|++|+++++++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 3679999999975 9999999999999999999988764
No 437
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.31 E-value=0.00087 Score=63.48 Aligned_cols=70 Identities=26% Similarity=0.146 Sum_probs=50.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCcccC--HHhhhcCCcEEEEccCCh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPVLT--REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~~~--~~~~~~~aDvvi~a~G~~ 130 (243)
.+.+++|+|+|+|++|+.+|..|+..|.+|+++|.++.. .......|+++.. ..+....+|+|+.++|.+
T Consensus 13 ~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 13 DWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSPGWR 89 (480)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECCCcC
Confidence 356899999999999999999999999999999976531 1122234654321 111234689999998864
No 438
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.31 E-value=0.0012 Score=58.41 Aligned_cols=64 Identities=20% Similarity=0.146 Sum_probs=47.3
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-hcCCcccCHHhh-hcCCcEEEEccC
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICALQAL-TEGIPVLTREDV-VSEAGLFVTTTE 128 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~~a~-~~G~~~~~~~~~-~~~aDvvi~a~G 128 (243)
.+++|+|+|+|+.+++++..|+..|+ +|+++++++++.+... ..+.... .+. ...+|+||+||.
T Consensus 121 ~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~--~~~~~~~~dlvINaTp 187 (272)
T PRK12550 121 PDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWR--PDLGGIEADILVNVTP 187 (272)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcch--hhcccccCCEEEECCc
Confidence 46799999999999999999999998 6999999988754332 2232211 111 245899999973
No 439
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.30 E-value=0.0012 Score=58.84 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=61.2
Q ss_pred hhhhhhhccccccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCch---hHHHH-hhcC------CcccCHH-----
Q 037949 51 PDGLMRATDITIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLI---CALQA-LTEG------IPVLTRE----- 114 (243)
Q Consensus 51 ~~av~~~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~---r~~~a-~~~G------~~~~~~~----- 114 (243)
+.++++. +..+.+++++|+|+|+.+++++..+...|+ +|+++++++. +.+.. ...+ ..+.+.+
T Consensus 112 ~~~l~~~-~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l 190 (288)
T PRK12749 112 IRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAF 190 (288)
T ss_pred HHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhh
Confidence 4455432 334688999999999999999999999998 8999999853 33221 1111 1122222
Q ss_pred -hhhcCCcEEEEccCC--hhcccH---HHHccCCCCeEEEEecCC
Q 037949 115 -DVVSEAGLFVTTTEN--ADIIMV---RHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 115 -~~~~~aDvvi~a~G~--~~~i~~---~~l~~l~~g~~vvnvg~~ 153 (243)
+....+|+||+||.. .+..+. .....++++..|..+=..
T Consensus 191 ~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 235 (288)
T PRK12749 191 AEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN 235 (288)
T ss_pred hhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCC
Confidence 234578999999732 110000 012345666666665443
No 440
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.30 E-value=0.00093 Score=65.89 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=50.8
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHhhcCCccc---------C
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLI---------------------CALQALTEGIPVL---------T 112 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~---------------------r~~~a~~~G~~~~---------~ 112 (243)
.|++|+|||+|+.|+.+|..|+..|.+|+++|.++. +...+...|+++. +
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i~ 405 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDIS 405 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcCC
Confidence 589999999999999999999999999999987643 1223344565421 2
Q ss_pred HHhhhcCCcEEEEccCCh
Q 037949 113 REDVVSEAGLFVTTTENA 130 (243)
Q Consensus 113 ~~~~~~~aDvvi~a~G~~ 130 (243)
.++...++|.|+.++|..
T Consensus 406 ~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 406 LESLLEDYDAVFVGVGTY 423 (654)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 233345799999999863
No 441
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.29 E-value=0.0014 Score=60.44 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=60.8
Q ss_pred cCcEEEEEcC-ChHHHHHHHHHHhC-CCEEEEEeCCchhHHHHhhcCCcccCHHhhhcCCcEEEEccCChhc---ccHHH
Q 037949 63 AGKIAVDCGH-GDVGRGCAAALKAV-GARVMGTEIDLICALQALTEGIPVLTREDVVSEAGLFVTTTENADI---IMVRH 137 (243)
Q Consensus 63 ~g~~vlViG~-G~IG~~~A~~l~~~-Ga~V~v~d~~~~r~~~a~~~G~~~~~~~~~~~~aDvvi~a~G~~~~---i~~~~ 137 (243)
.-.+|+|+|. |-||..+|+.++.. |.+|+.+|+++.. ..++.+.+.++|+|+-|+....+ +. +.
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~----------~~~~~~~v~~aDlVilavPv~~~~~~l~-~l 71 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG----------SLDPATLLQRADVLIFSAPIRHTAALIE-EY 71 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc----------cCCHHHHhcCCCEEEEeCCHHHHHHHHH-HH
Confidence 4578999999 99999999999964 7899999885321 22456677899999999865433 32 22
Q ss_pred Hc---cCCCCeEEEEecCCC
Q 037949 138 MK---QMKNAAIVCNIGHFD 154 (243)
Q Consensus 138 l~---~l~~g~~vvnvg~~~ 154 (243)
.. .++++++|..+|...
T Consensus 72 ~~~~~~l~~~~iVtDVgSvK 91 (370)
T PRK08818 72 VALAGGRAAGQLWLDVTSIK 91 (370)
T ss_pred hhhhcCCCCCeEEEECCCCc
Confidence 22 268999999999876
No 442
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.29 E-value=0.0026 Score=55.60 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=78.3
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhCCC-----------EEEEEeCCc-----------hhHHHHh--hcCCcccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAVGA-----------RVMGTEIDL-----------ICALQAL--TEGIPVLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga-----------~V~v~d~~~-----------~r~~~a~--~~G~~~~~~~ 114 (243)
+..+.+.+++++|+|.-|.++|..+...+. +++++|... .+...+. ...-+..++.
T Consensus 20 g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~ 99 (254)
T cd00762 20 KKKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLE 99 (254)
T ss_pred CCChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHH
Confidence 446789999999999999999999988776 588887642 1121111 1111234688
Q ss_pred hhhc--CCcEEEEccCChhcccHHHHccCC---CCeEEEEecCCCC--CCChhHHHHh
Q 037949 115 DVVS--EAGLFVTTTENADIIMVRHMKQMK---NAAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 115 ~~~~--~aDvvi~a~G~~~~i~~~~l~~l~---~g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
++++ ++|+++-+++.+++++.+.++.|. +.-+|.-.+-... |+..++...|
T Consensus 100 eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 100 DAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHHHhh
Confidence 8888 999999999888999999999997 7777776665543 6777766665
No 443
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=97.29 E-value=0.00095 Score=66.40 Aligned_cols=84 Identities=15% Similarity=0.102 Sum_probs=55.9
Q ss_pred cEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhh-----------cCC-------------cccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALT-----------EGI-------------PVLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~-----------~G~-------------~~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+. ..|.+|+++|++++.+..+.. .|. ...+.-+.+++
T Consensus 305 ~~v~ViGaG~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 384 (699)
T TIGR02440 305 KKVGILGGGLMGGGIASVTATKAGIPVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITGTTDYRGFKD 384 (699)
T ss_pred cEEEEECCcHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEEeCChHHhcc
Confidence 68999999999999999987 489999999999876544321 111 00011134679
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vvn 149 (243)
||+|+||..-. .++ .+.-+.+++++++..
T Consensus 385 adlViEav~E~l~~K~~v~-~~l~~~~~~~~ilas 418 (699)
T TIGR02440 385 VDIVIEAVFEDLALKHQMV-KDIEQECAAHTIFAS 418 (699)
T ss_pred CCEEEEeccccHHHHHHHH-HHHHhhCCCCcEEEe
Confidence 99999996421 222 222344577777763
No 444
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.29 E-value=0.0011 Score=56.99 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=33.1
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
.++||+++|+|+. .||..+++.+...|++|+++++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~ 44 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE 44 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc
Confidence 3679999999987 899999999999999999887754
No 445
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.28 E-value=0.0015 Score=55.66 Aligned_cols=40 Identities=30% Similarity=0.405 Sum_probs=35.3
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++++++|+|+ |.||+.+++.+...|++|+++++++.+..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~ 42 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA 42 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 46799999996 59999999999999999999999877653
No 446
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.28 E-value=0.00062 Score=66.81 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=55.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--CH--Hh-----hhcCCcEEEEccCChh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--TR--ED-----VVSEAGLFVTTTENAD 131 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~~--~~-----~~~~aDvvi~a~G~~~ 131 (243)
.++|+|+|+|.+|+.+++.|+..|.+++++|.|+.+.+.+++.|+++. |. .+ -++++|.++.++.+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHH
Confidence 468999999999999999999999999999999999888887787542 11 11 2458999999987754
No 447
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0013 Score=55.54 Aligned_cols=40 Identities=33% Similarity=0.268 Sum_probs=35.1
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+.+++++|+|+ |.||+.+++.|...|++|+++++++.++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~ 44 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE 44 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH
Confidence 46899999997 59999999999999999999999887643
No 448
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=97.28 E-value=0.00076 Score=67.45 Aligned_cols=84 Identities=12% Similarity=0.085 Sum_probs=57.9
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c-------------ccCHHhhhcC
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P-------------VLTREDVVSE 119 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~-------------~~~~~~~~~~ 119 (243)
++|.|+|+|.+|..+|..+...|.+|+++|++++.++.+.. .|. . +.+. +.+.+
T Consensus 336 ~~v~ViGaG~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 414 (737)
T TIGR02441 336 KTLAVLGAGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLDY-SGFKN 414 (737)
T ss_pred cEEEEECCCHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhcc
Confidence 68999999999999999999999999999999987654321 110 0 0011 24578
Q ss_pred CcEEEEccCC----hhcccHHHHccCCCCeEEEE
Q 037949 120 AGLFVTTTEN----ADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 120 aDvvi~a~G~----~~~i~~~~l~~l~~g~~vvn 149 (243)
+|+||||.-- +..+-.+.-..+++++++..
T Consensus 415 aDlViEAv~E~l~~K~~vf~~l~~~~~~~~ilas 448 (737)
T TIGR02441 415 ADMVIEAVFEDLSLKHKVIKEVEAVVPPHCIIAS 448 (737)
T ss_pred CCeehhhccccHHHHHHHHHHHHhhCCCCcEEEE
Confidence 9999999632 21122222345688888873
No 449
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0003 Score=59.98 Aligned_cols=36 Identities=31% Similarity=0.383 Sum_probs=32.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 65 KIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 65 ~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++++|+|+ |.||+.+++.+...|++|+++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~ 38 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERL 38 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 68999996 5999999999999999999999988754
No 450
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.27 E-value=0.0025 Score=59.01 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=84.3
Q ss_pred Hhhhccccchhhhhhh---hccccccCcEEEEEcCChHHHHHHHHHHhCCC---EEEEEeCCch----h---------HH
Q 037949 41 DNLYGFRHSLPDGLMR---ATDITIAGKIAVDCGHGDVGRGCAAALKAVGA---RVMGTEIDLI----C---------AL 101 (243)
Q Consensus 41 ~~~~~~~~~~~~av~~---~~~~~l~g~~vlViG~G~IG~~~A~~l~~~Ga---~V~v~d~~~~----r---------~~ 101 (243)
|..+|++.....++.. ..+..++..++++.|+|.-|.+++..+++.|+ +|+++|+... | ..
T Consensus 173 DDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~G~l~~~r~~~~~~~~k~~ 252 (432)
T COG0281 173 DDQQGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRKGLLYDGREDLTMNQKKYA 252 (432)
T ss_pred ccccHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecCCcccCCCcccccchHHHH
Confidence 3445666555444432 23456788999999999999999999999999 5999887522 1 11
Q ss_pred HHh-hcCCcccCHHhhhcCCcEEEEccCChhcccHHHHccCCCCeEEEEecCCCCCCChhHHHHh
Q 037949 102 QAL-TEGIPVLTREDVVSEAGLFVTTTENADIIMVRHMKQMKNAAIVCNIGHFDNEIDMLDLEAY 165 (243)
Q Consensus 102 ~a~-~~G~~~~~~~~~~~~aDvvi~a~G~~~~i~~~~l~~l~~g~~vvnvg~~~~~id~~~l~~~ 165 (243)
.+. ..+.. .. ++.+.++|+++-|++. ++++.+.++.|.+..+|.-.+-...|+..+....|
T Consensus 253 ~a~~~~~~~-~~-~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfalaNP~pEi~Pe~a~~~ 314 (432)
T COG0281 253 KAIEDTGER-TL-DLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALANPTPEITPEDAKEW 314 (432)
T ss_pred HHHhhhccc-cc-cccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecCCCCccCCHHHHhhc
Confidence 111 11100 10 3466799999999988 88999999999888777766655566777766654
No 451
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0015 Score=55.93 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=32.7
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++|+|++ .||+.+++.|...|++|+++++++...
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~ 39 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV 39 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5789999985 899999999999999999998887644
No 452
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=97.25 E-value=0.0011 Score=59.42 Aligned_cols=87 Identities=24% Similarity=0.287 Sum_probs=57.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-----------cCC-c------c---cC-HHh--hhcC
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-----------EGI-P------V---LT-RED--VVSE 119 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------~---~~-~~~--~~~~ 119 (243)
-++|.|+|+|.+|.++|..+...|.+|++.|++++.+..+.. .|. . . +. ..+ .+++
T Consensus 3 i~kv~ViGaG~MG~gIA~~~A~~G~~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~~~l~~ 82 (307)
T COG1250 3 IKKVAVIGAGVMGAGIAAVFALAGYDVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDLAALKD 82 (307)
T ss_pred ccEEEEEcccchhHHHHHHHhhcCCceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCchhHhcc
Confidence 478999999999999999999977999999999775543321 121 0 0 00 111 4678
Q ss_pred CcEEEEccCCh-----hcccHHHHccCCCCeEEE-Eec
Q 037949 120 AGLFVTTTENA-----DIIMVRHMKQMKNAAIVC-NIG 151 (243)
Q Consensus 120 aDvvi~a~G~~-----~~i~~~~l~~l~~g~~vv-nvg 151 (243)
||+|+|+.--. .++. +.=..+++++++. |++
T Consensus 83 ~DlVIEAv~E~levK~~vf~-~l~~~~~~~aIlASNTS 119 (307)
T COG1250 83 ADLVIEAVVEDLELKKQVFA-ELEALAKPDAILASNTS 119 (307)
T ss_pred CCEEEEeccccHHHHHHHHH-HHHhhcCCCcEEeeccC
Confidence 99999996432 2232 2234447888887 443
No 453
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.25 E-value=0.0012 Score=61.83 Aligned_cols=68 Identities=22% Similarity=0.267 Sum_probs=48.3
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhH----HHHhhcCCccc---CHHhhhc-CCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICA----LQALTEGIPVL---TREDVVS-EAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~----~~a~~~G~~~~---~~~~~~~-~aDvvi~a~G~ 129 (243)
+.|++++|+|.|++|+++|+.|+..|++|+++|.++... ......|.++. ...+... +.|+||..+|.
T Consensus 3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi 78 (447)
T PRK02472 3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGI 78 (447)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCC
Confidence 468999999999999999999999999999999765321 11223465432 1223333 38999887654
No 454
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.25 E-value=0.0015 Score=55.59 Aligned_cols=86 Identities=17% Similarity=0.210 Sum_probs=56.9
Q ss_pred EEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh--------cCCc----ccCHHhhhcCCcEEEEccCChhc
Q 037949 66 IAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALT--------EGIP----VLTREDVVSEAGLFVTTTENADI 132 (243)
Q Consensus 66 ~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~--------~G~~----~~~~~~~~~~aDvvi~a~G~~~~ 132 (243)
++.|+| +|.+|..++..+...|.+|+++++++++...... .|+. ..+..+.+..+|+|+.|+.....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~~ 81 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDHV 81 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHHH
Confidence 589997 8999999999999999999999999876533222 1221 12445667899999999765432
Q ss_pred ccH-HHHccCCCCeEEEEec
Q 037949 133 IMV-RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 133 i~~-~~l~~l~~g~~vvnvg 151 (243)
-.. +.+.....+.+|+++.
T Consensus 82 ~~~l~~l~~~l~~~vvI~~~ 101 (219)
T TIGR01915 82 LKTLESLRDELSGKLVISPV 101 (219)
T ss_pred HHHHHHHHHhccCCEEEEec
Confidence 110 1132112345677653
No 455
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.25 E-value=0.0007 Score=66.19 Aligned_cols=86 Identities=17% Similarity=0.104 Sum_probs=62.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc--C---H---Hhh-hcCCcEEEEccCChhcc-
Q 037949 64 GKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL--T---R---EDV-VSEAGLFVTTTENADII- 133 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~--~---~---~~~-~~~aDvvi~a~G~~~~i- 133 (243)
..+++|+|+|++|+.+++.|...|.+++++|.|+++.+.+.+.|..+. | . +++ +++||.++.+++++..-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~ 479 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTM 479 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHH
Confidence 368999999999999999999999999999999999888887786542 1 1 111 46899999998775421
Q ss_pred -cHHHHccCCCCeEEEE
Q 037949 134 -MVRHMKQMKNAAIVCN 149 (243)
Q Consensus 134 -~~~~l~~l~~g~~vvn 149 (243)
-....+...|...++.
T Consensus 480 ~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 480 KIVELCQQHFPHLHILA 496 (601)
T ss_pred HHHHHHHHHCCCCeEEE
Confidence 0122344455655554
No 456
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.25 E-value=0.0015 Score=58.97 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=57.3
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----------------cCHHhhhcCCcEEEEcc
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----------------LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----------------~~~~~~~~~aDvvi~a~ 127 (243)
.++.|+|+|.||..+|..+...|.+|+++|+++.. +.....|..+ .+..+....+|+|+.|+
T Consensus 3 mkI~IiG~G~mG~~~A~~L~~~G~~V~~~~r~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil~v 81 (341)
T PRK08229 3 ARICVLGAGSIGCYLGGRLAAAGADVTLIGRARIG-DELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLVLVTV 81 (341)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCcEEEEecHHHH-HHHHhcCceeecCCCcceecccceeEeccChhhccCCCEEEEEe
Confidence 46999999999999999999999999999987542 2333344321 11123456899999997
Q ss_pred CChhc---ccHHHHccCCCCeEEEEe
Q 037949 128 ENADI---IMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 128 G~~~~---i~~~~l~~l~~g~~vvnv 150 (243)
..... +. +....++++.+++..
T Consensus 82 k~~~~~~~~~-~l~~~~~~~~iii~~ 106 (341)
T PRK08229 82 KSAATADAAA-ALAGHARPGAVVVSF 106 (341)
T ss_pred cCcchHHHHH-HHHhhCCCCCEEEEe
Confidence 65432 32 233445777777765
No 457
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.25 E-value=0.0017 Score=57.47 Aligned_cols=83 Identities=14% Similarity=0.114 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc--------------cCHHhhhcCCcEEEEccCChh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV--------------LTREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~--------------~~~~~~~~~aDvvi~a~G~~~ 131 (243)
+++|+|+|.||..+|..|...|.+|+++++ +++.+.....|..+ .+.++....+|+++.|+.+..
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~~ 80 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAYQ 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecccC
Confidence 589999999999999999999999999998 66554444444321 112333468999999976533
Q ss_pred ---cccHHHHccCCCCeEEEEe
Q 037949 132 ---IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnv 150 (243)
++. ..-..++++..++++
T Consensus 81 ~~~~~~-~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 81 LDAAIP-DLKPLVGEDTVIIPL 101 (305)
T ss_pred HHHHHH-HHHhhcCCCCEEEEe
Confidence 221 222334566667654
No 458
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0011 Score=56.23 Aligned_cols=39 Identities=33% Similarity=0.281 Sum_probs=34.8
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++++|+|+ |.||+.+++.+...|++|+++++++.++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~ 44 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA 44 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 57899999997 5999999999999999999998887654
No 459
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0017 Score=54.99 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=31.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 66 IAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 66 ~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
+++|+|+ |.||+.+++.+...|++|+++++++.++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~ 38 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE 38 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5899998 49999999999999999999999877653
No 460
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.23 E-value=0.0033 Score=57.51 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=54.5
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhhh-----cCCcEEEEccC
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDVV-----SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~~-----~~aDvvi~a~G 128 (243)
..+|+.|+|+|++ .+|..+.+.++..|+.++++..+.+..+..+++|++ +++ ..+.+ .+.|+|++|.|
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg 234 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVG 234 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence 4689999999987 999999999999997666666677777788888975 333 22222 25999999998
Q ss_pred Chh
Q 037949 129 NAD 131 (243)
Q Consensus 129 ~~~ 131 (243)
...
T Consensus 235 ~~~ 237 (347)
T KOG1198|consen 235 GST 237 (347)
T ss_pred CCc
Confidence 753
No 461
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0015 Score=56.18 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
+.+++++|+|+. .||+.+++.|...|++|+++++++.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 578999999976 8999999999999999999988764
No 462
>PRK05599 hypothetical protein; Provisional
Probab=97.23 E-value=0.0004 Score=59.69 Aligned_cols=36 Identities=19% Similarity=0.040 Sum_probs=31.3
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICAL 101 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~ 101 (243)
++++|+|++ +||+.+|+.+. .|++|+++++++.++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~ 37 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ 37 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH
Confidence 478999987 89999999998 5999999999877653
No 463
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=97.23 E-value=0.0019 Score=58.59 Aligned_cols=83 Identities=22% Similarity=0.183 Sum_probs=56.8
Q ss_pred EEEEcCChHHHHHHHHHHhC-CCEEE-EEeCCchhHHH-HhhcCCcc-------------------cCHHhhhcCCcEEE
Q 037949 67 AVDCGHGDVGRGCAAALKAV-GARVM-GTEIDLICALQ-ALTEGIPV-------------------LTREDVVSEAGLFV 124 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~-Ga~V~-v~d~~~~r~~~-a~~~G~~~-------------------~~~~~~~~~aDvvi 124 (243)
|+|+|+|.||+.+++.+... +++|+ +.|.++.+... +...|++. -++++++.++|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 58999999999999997754 46654 46877765322 22334432 12456677899999
Q ss_pred EccCC-hhcccHHHHccCCCCeEEEE
Q 037949 125 TTTEN-ADIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 125 ~a~G~-~~~i~~~~l~~l~~g~~vvn 149 (243)
+|+|. .+..+.+.+..++.+.+++.
T Consensus 81 e~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred ECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 99975 35566677777777776654
No 464
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.23 E-value=0.0028 Score=55.42 Aligned_cols=90 Identities=21% Similarity=0.149 Sum_probs=68.3
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC----HHhh----h--cCCcEEEEccC
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT----REDV----V--SEAGLFVTTTE 128 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~----~~~~----~--~~aDvvi~a~G 128 (243)
..+|++++|.| .|++|+.+++.++.+|++|++++.+ .+...+...|.+ +.+ ..+. . .+.|++++|+|
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~ 220 (326)
T cd08272 142 VQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVG 220 (326)
T ss_pred CCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCC
Confidence 35799999999 5899999999999999999988877 666666556653 221 1111 1 25899999988
Q ss_pred ChhcccHHHHccCCCCeEEEEecCC
Q 037949 129 NADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 129 ~~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
... +. ..++.+++++.++..|..
T Consensus 221 ~~~-~~-~~~~~l~~~g~~v~~~~~ 243 (326)
T cd08272 221 GET-LD-ASFEAVALYGRVVSILGG 243 (326)
T ss_pred hHH-HH-HHHHHhccCCEEEEEecC
Confidence 754 43 478899999999988765
No 465
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.23 E-value=0.0012 Score=55.68 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=33.4
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
.+..++|+|+|+|++|..+++.|...|. +++++|.|
T Consensus 18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3678999999999999999999999998 89999887
No 466
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.23 E-value=0.0012 Score=62.00 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=32.6
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCc
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDL 97 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~ 97 (243)
++|++++|+|+ |.||+.+++.+...|++|+++++.+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~ 244 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA 244 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999998 6999999999999999999998743
No 467
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.00039 Score=60.49 Aligned_cols=36 Identities=31% Similarity=0.294 Sum_probs=31.9
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++++|+|++ .||+.+++.+...|++|+++++++..+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~ 37 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGL 37 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 479999976 999999999999999999999887654
No 468
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0017 Score=56.54 Aligned_cols=38 Identities=26% Similarity=0.260 Sum_probs=33.6
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+++++|+|+. .||+.+++.+...|++|++.++++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 40 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL 40 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 36899999975 999999999999999999999987654
No 469
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0016 Score=55.47 Aligned_cols=39 Identities=36% Similarity=0.569 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
++|++++|+|+. .||..+++.+...|++|+++++++...
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~ 42 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA 42 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH
Confidence 578999999985 999999999999999999998887654
No 470
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=97.20 E-value=0.0027 Score=55.50 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=74.9
Q ss_pred cccccCcEEEEEcCChHHHHHHHHHHhC----CC-------EEEEEeCCc-----------hhHHHHhhcCC--cccCHH
Q 037949 59 DITIAGKIAVDCGHGDVGRGCAAALKAV----GA-------RVMGTEIDL-----------ICALQALTEGI--PVLTRE 114 (243)
Q Consensus 59 ~~~l~g~~vlViG~G~IG~~~A~~l~~~----Ga-------~V~v~d~~~-----------~r~~~a~~~G~--~~~~~~ 114 (243)
+..+.+.+++++|+|.-|.+++..+... |. +++++|.+. .+...+....- ...++.
T Consensus 20 g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~ 99 (255)
T PF03949_consen 20 GKKLSDQRIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWGSLL 99 (255)
T ss_dssp TS-GGG-EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--SSHH
T ss_pred CCCHHHcEEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccccCHH
Confidence 4468999999999999999999988888 98 488888752 12222322211 124688
Q ss_pred hhhcCC--cEEEEccCChhcccHHHHccCCC---CeEEEEecCCCC--CCChhHHHHh
Q 037949 115 DVVSEA--GLFVTTTENADIIMVRHMKQMKN---AAIVCNIGHFDN--EIDMLDLEAY 165 (243)
Q Consensus 115 ~~~~~a--Dvvi~a~G~~~~i~~~~l~~l~~---g~~vvnvg~~~~--~id~~~l~~~ 165 (243)
++++++ |+++-++|.+++++.+.++.|.+ .-+|.-.+-... |+...+...|
T Consensus 100 eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~peda~~~ 157 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLSNPTPKAECTPEDAYEW 157 (255)
T ss_dssp HHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred HHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECCCCCCcccCCHHHHHhh
Confidence 888877 99999999999999999999976 777777666653 7777777666
No 471
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.19 E-value=0.0016 Score=58.35 Aligned_cols=88 Identities=19% Similarity=0.152 Sum_probs=59.8
Q ss_pred cEEEEEcCChHHHHHHHHHHhCCC--EEEEEeCCchhHHHHhh-c-------CCc--cc-CHHhhhcCCcEEEEccCChh
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVGA--RVMGTEIDLICALQALT-E-------GIP--VL-TREDVVSEAGLFVTTTENAD 131 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~Ga--~V~v~d~~~~r~~~a~~-~-------G~~--~~-~~~~~~~~aDvvi~a~G~~~ 131 (243)
++|+|+|+|.+|..+|..+...|. +|+++|+++.++..... . +.. +. ...+.+.++|+|+.|+|.+.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~~ 80 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAPQ 80 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCCC
Confidence 479999999999999999999995 79999998876432211 1 111 11 12234689999999988631
Q ss_pred ---------------cccH--HHHccCCCCeEEEEecC
Q 037949 132 ---------------IIMV--RHMKQMKNAAIVCNIGH 152 (243)
Q Consensus 132 ---------------~i~~--~~l~~l~~g~~vvnvg~ 152 (243)
++.. +.+....+.+++++++-
T Consensus 81 ~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 81 KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 1110 12445577899998873
No 472
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.19 E-value=0.0013 Score=55.96 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=29.7
Q ss_pred cCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCc
Q 037949 63 AGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDL 97 (243)
Q Consensus 63 ~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~ 97 (243)
++|+++|+|+. .||+.+|+.|...|++|++. +.++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~ 38 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS 38 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh
Confidence 57999999975 99999999999999998874 4343
No 473
>PRK12742 oxidoreductase; Provisional
Probab=97.18 E-value=0.002 Score=54.45 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=30.4
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeC
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEI 95 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~ 95 (243)
++|++++|+|+ |.||+.+++.+...|++|+++.+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 57899999997 59999999999999999988754
No 474
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.18 E-value=0.00034 Score=62.47 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=32.3
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCch
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLI 98 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~ 98 (243)
..++|.|+|+|+= +-|+.+|+.+...|.+|.+.=.+++
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ 64 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEE 64 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCc
Confidence 4678999999998 9999999999999999988534443
No 475
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.18 E-value=0.00047 Score=59.10 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=32.9
Q ss_pred ccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.||+|+|+| +|+||+.+.+.|...|+.+.++|-+.+..
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~ 42 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP 42 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH
Confidence 5699999998 67999999999999999888876665543
No 476
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0017 Score=55.90 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=32.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 64 GKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 64 g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+++++|+|+ |.||+.+++.+...|++|+++++++...
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~ 38 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL 38 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 468999998 5999999999999999999999987654
No 477
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.17 E-value=0.004 Score=54.97 Aligned_cols=97 Identities=9% Similarity=-0.023 Sum_probs=61.0
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC----CEEEEEeCCchh-HHHHhh-c-CCc-ccCHHhhhcCCcEEEEccCChhccc--
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG----ARVMGTEIDLIC-ALQALT-E-GIP-VLTREDVVSEAGLFVTTTENADIIM-- 134 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G----a~V~v~d~~~~r-~~~a~~-~-G~~-~~~~~~~~~~aDvvi~a~G~~~~i~-- 134 (243)
.++.|+|+|.+|..++..+...| .+|+++++++.. ...... . +.. ..+..+.+.++|+||.|+.......
T Consensus 2 ~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~~~~vl 81 (277)
T PRK06928 2 EKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLAVLPLL 81 (277)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHHHHHHH
Confidence 36999999999999999999888 579988886532 222222 2 222 2345667789999999976433211
Q ss_pred HHHHccCCCCeEEEEecCCCCCCChhHHHH
Q 037949 135 VRHMKQMKNAAIVCNIGHFDNEIDMLDLEA 164 (243)
Q Consensus 135 ~~~l~~l~~g~~vvnvg~~~~~id~~~l~~ 164 (243)
.+....++++..++++.-+ ++.+.+..
T Consensus 82 ~~l~~~l~~~~~ivS~~aG---i~~~~l~~ 108 (277)
T PRK06928 82 KDCAPVLTPDRHVVSIAAG---VSLDDLLE 108 (277)
T ss_pred HHHHhhcCCCCEEEEECCC---CCHHHHHH
Confidence 1112334567677765433 45555544
No 478
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.17 E-value=0.0026 Score=57.56 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=48.6
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCC-EEEEEeCCchhHH-HHhh-------cCC--ccc--CHHhhhcCCcEEEEccC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGA-RVMGTEIDLICAL-QALT-------EGI--PVL--TREDVVSEAGLFVTTTE 128 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga-~V~v~d~~~~r~~-~a~~-------~G~--~~~--~~~~~~~~aDvvi~a~G 128 (243)
.+.++|.|+|+|.+|..+|..+...|. +|+++|+++.++. .+.+ .+. .+. +-.+.+++||+|+.+.|
T Consensus 4 ~~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~tag 83 (321)
T PTZ00082 4 IKRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVTAG 83 (321)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEECCC
Confidence 345799999999999999999999995 9999999988531 1111 111 111 11246789999999876
Q ss_pred C
Q 037949 129 N 129 (243)
Q Consensus 129 ~ 129 (243)
.
T Consensus 84 ~ 84 (321)
T PTZ00082 84 L 84 (321)
T ss_pred C
Confidence 4
No 479
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=97.16 E-value=0.0016 Score=64.86 Aligned_cols=83 Identities=14% Similarity=0.076 Sum_probs=57.5
Q ss_pred cEEEEEcCChHHHHHHHHHH-hCCCEEEEEeCCchhHHHHhh-----------cCC-c------------c-cCHHhhhc
Q 037949 65 KIAVDCGHGDVGRGCAAALK-AVGARVMGTEIDLICALQALT-----------EGI-P------------V-LTREDVVS 118 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~-~~Ga~V~v~d~~~~r~~~a~~-----------~G~-~------------~-~~~~~~~~ 118 (243)
++|.|+|+|.+|..+|..+. ..|.+|+++|++++.+..+.. .|. . . .+. +.++
T Consensus 310 ~~v~ViGaG~mG~giA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 388 (708)
T PRK11154 310 NKVGVLGGGLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISGTTDY-RGFK 388 (708)
T ss_pred cEEEEECCchhhHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEEeCCh-HHhc
Confidence 78999999999999999988 789999999999886544321 121 0 0 011 3457
Q ss_pred CCcEEEEccCC----h-hcccHHHHccCCCCeEEEE
Q 037949 119 EAGLFVTTTEN----A-DIIMVRHMKQMKNAAIVCN 149 (243)
Q Consensus 119 ~aDvvi~a~G~----~-~~i~~~~l~~l~~g~~vvn 149 (243)
++|+||||..- + .++ .+.=+.+++++++..
T Consensus 389 ~aDlViEav~E~~~~K~~v~-~~le~~~~~~~ilas 423 (708)
T PRK11154 389 HADVVIEAVFEDLALKQQMV-AEVEQNCAPHTIFAS 423 (708)
T ss_pred cCCEEeecccccHHHHHHHH-HHHHhhCCCCcEEEE
Confidence 99999999642 1 223 222345688888874
No 480
>PRK06199 ornithine cyclodeaminase; Validated
Probab=97.16 E-value=0.0022 Score=59.28 Aligned_cols=92 Identities=20% Similarity=0.101 Sum_probs=66.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHh-C-CC-EEEEEeCCchhHHHHh-----hc-CC-c---ccCHHhhhcCCcEEEEccCCh
Q 037949 64 GKIAVDCGHGDVGRGCAAALKA-V-GA-RVMGTEIDLICALQAL-----TE-GI-P---VLTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 64 g~~vlViG~G~IG~~~A~~l~~-~-Ga-~V~v~d~~~~r~~~a~-----~~-G~-~---~~~~~~~~~~aDvvi~a~G~~ 130 (243)
-++++|+|+|..++..++.+.. + .. +|.++++++.+..... .. +. + +.+.++++.+||+|+.||.+.
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~ 234 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGE 234 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCC
Confidence 4899999999999999888876 4 35 8999999998754322 11 22 2 235788899999999987532
Q ss_pred -------hcccHHHHccCCCCeEEEEecCCCCCCChh
Q 037949 131 -------DIIMVRHMKQMKNAAIVCNIGHFDNEIDML 160 (243)
Q Consensus 131 -------~~i~~~~l~~l~~g~~vvnvg~~~~~id~~ 160 (243)
+++.. +.+++|..|+.+|.. ++|..
T Consensus 235 ~~~~s~~Pv~~~---~~lkpG~hv~~ig~~--eld~~ 266 (379)
T PRK06199 235 TGDPSTYPYVKR---EWVKPGAFLLMPAAC--RIDEG 266 (379)
T ss_pred CCCCCcCcEecH---HHcCCCcEEecCCcc--cCCHH
Confidence 45543 467899999887764 45533
No 481
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.15 E-value=0.00048 Score=55.00 Aligned_cols=32 Identities=34% Similarity=0.360 Sum_probs=28.4
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCC-EEEEEeCC
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGA-RVMGTEID 96 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga-~V~v~d~~ 96 (243)
|+++|+|++ +||+.+++.+...|+ +|+++.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 689999977 999999999999988 67778887
No 482
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.15 E-value=0.0015 Score=64.72 Aligned_cols=40 Identities=35% Similarity=0.488 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 61 TIAGKIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 61 ~l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
.+.||+++|+|++ .||+.+++.|...|++|+++++++.++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~ 451 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA 451 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 4679999999985 899999999999999999999987654
No 483
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=97.14 E-value=0.0019 Score=56.79 Aligned_cols=87 Identities=11% Similarity=-0.040 Sum_probs=55.6
Q ss_pred cEEEEEcCChHHHHHHHHHHhCC---CE-EEEEeCCchhHHHHhhcCCcc-cCHHhh-hcCCcEEEEccCChhcccHHHH
Q 037949 65 KIAVDCGHGDVGRGCAAALKAVG---AR-VMGTEIDLICALQALTEGIPV-LTREDV-VSEAGLFVTTTENADIIMVRHM 138 (243)
Q Consensus 65 ~~vlViG~G~IG~~~A~~l~~~G---a~-V~v~d~~~~r~~~a~~~G~~~-~~~~~~-~~~aDvvi~a~G~~~~i~~~~l 138 (243)
.+|+|+|||.||..+++.+...+ ++ +.++++++.+.... .....+ .++++. ....|+|+||.+...+- +-..
T Consensus 3 ~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~-~~~~~~~~~l~~ll~~~~DlVVE~A~~~av~-e~~~ 80 (267)
T PRK13301 3 HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPAL-AGRVALLDGLPGLLAWRPDLVVEAAGQQAIA-EHAE 80 (267)
T ss_pred eEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHh-hccCcccCCHHHHhhcCCCEEEECCCHHHHH-HHHH
Confidence 57999999999999999987543 44 45577777554222 222333 357775 46899999998765432 2344
Q ss_pred ccCCCCeEEEEecCC
Q 037949 139 KQMKNAAIVCNIGHF 153 (243)
Q Consensus 139 ~~l~~g~~vvnvg~~ 153 (243)
..++.|.-++..+.+
T Consensus 81 ~iL~~g~dlvv~SvG 95 (267)
T PRK13301 81 GCLTAGLDMIICSAG 95 (267)
T ss_pred HHHhcCCCEEEEChh
Confidence 555555555544443
No 484
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=97.13 E-value=0.0036 Score=54.15 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=69.0
Q ss_pred cccCcEEEEEc-CChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCc-ccC-----HHhh----h--cCCcEEEEcc
Q 037949 61 TIAGKIAVDCG-HGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIP-VLT-----REDV----V--SEAGLFVTTT 127 (243)
Q Consensus 61 ~l~g~~vlViG-~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~-~~~-----~~~~----~--~~aDvvi~a~ 127 (243)
..+|++++|.| .|.+|+.+++.++++|++|++++.++.+...+...|.+ +++ ..+. . .++|++++++
T Consensus 118 ~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~ 197 (303)
T cd08251 118 LAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTL 197 (303)
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECC
Confidence 45799999976 56999999999999999999998888777666666753 221 1111 1 3689999998
Q ss_pred CChhcccHHHHccCCCCeEEEEecCCC
Q 037949 128 ENADIIMVRHMKQMKNAAIVCNIGHFD 154 (243)
Q Consensus 128 G~~~~i~~~~l~~l~~g~~vvnvg~~~ 154 (243)
+.. .+. ..++.++++|.+++.|..+
T Consensus 198 ~~~-~~~-~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 198 SGE-AIQ-KGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred cHH-HHH-HHHHHhccCcEEEEEeccC
Confidence 653 343 4688899999999987653
No 485
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.12 E-value=0.0011 Score=47.18 Aligned_cols=34 Identities=29% Similarity=0.176 Sum_probs=31.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC 99 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r 99 (243)
+++|+|+|.+|..+|..++.+|.+|+++++++.-
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5899999999999999999999999999988763
No 486
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.12 E-value=0.0036 Score=53.77 Aligned_cols=68 Identities=9% Similarity=0.043 Sum_probs=49.0
Q ss_pred cCcEEEEEcCChHHHHHHHHHHhCC---CE-EEEEeC-CchhHHHHhh-cCCcc-cCHHhhhcCCcEEEEccCCh
Q 037949 63 AGKIAVDCGHGDVGRGCAAALKAVG---AR-VMGTEI-DLICALQALT-EGIPV-LTREDVVSEAGLFVTTTENA 130 (243)
Q Consensus 63 ~g~~vlViG~G~IG~~~A~~l~~~G---a~-V~v~d~-~~~r~~~a~~-~G~~~-~~~~~~~~~aDvvi~a~G~~ 130 (243)
+..+++|+|+|.+|..++..+...| .+ ++++++ ++.+...... .+... .+.++.++++|+|+.|+...
T Consensus 3 ~~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~~ 77 (245)
T PRK07634 3 KKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPPS 77 (245)
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCHH
Confidence 4578999999999999999998776 23 667776 4555444333 45543 35667788999999997653
No 487
>PRK12743 oxidoreductase; Provisional
Probab=97.10 E-value=0.0022 Score=55.14 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=29.4
Q ss_pred CcEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCC
Q 037949 64 GKIAVDCGHG-DVGRGCAAALKAVGARVMGTEID 96 (243)
Q Consensus 64 g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~ 96 (243)
+|+++|+|+. .||+.+++.+...|++|+++..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999987 89999999999999999887543
No 488
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.10 E-value=0.0018 Score=52.65 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=48.3
Q ss_pred EEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcc-----cCH---HhhhcCCcEEEEccCC
Q 037949 67 AVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPV-----LTR---EDVVSEAGLFVTTTEN 129 (243)
Q Consensus 67 vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~-----~~~---~~~~~~aDvvi~a~G~ 129 (243)
|+|+|+ |.+|..+++.|...|.+|++.-+++.+... ..++++ .+. .+++.++|+|+.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689997 899999999999999999999999887654 334332 222 4457799999999873
No 489
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0022 Score=55.11 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=33.4
Q ss_pred cEEEEEcCC-hHHHHHHHHHHhCCCEEEEEeCCchhHHH
Q 037949 65 KIAVDCGHG-DVGRGCAAALKAVGARVMGTEIDLICALQ 102 (243)
Q Consensus 65 ~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~ 102 (243)
|+++|+|++ .||+.+++.+...|++|+++++++..+..
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~ 40 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA 40 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 689999975 89999999999999999999998876533
No 490
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.10 E-value=0.00086 Score=60.56 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=60.0
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCC-CEEEEEeCCchhHHH-Hhh-------cCC--cc---cCHHhhhcCCcEEEEcc
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVG-ARVMGTEIDLICALQ-ALT-------EGI--PV---LTREDVVSEAGLFVTTT 127 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~G-a~V~v~d~~~~r~~~-a~~-------~G~--~~---~~~~~~~~~aDvvi~a~ 127 (243)
.+.++|.|+|+|.+|..++..+...| ++++++|+++.++.. +.+ .+. .+ .+. +.+++||+|+.+.
T Consensus 3 ~~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVita 81 (319)
T PTZ00117 3 VKRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVITA 81 (319)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEECC
Confidence 35679999999999999999999989 699999998865321 111 111 11 122 3678999999998
Q ss_pred CChh---------------cccH--HHHccCCCCeEEEEec
Q 037949 128 ENAD---------------IIMV--RHMKQMKNAAIVCNIG 151 (243)
Q Consensus 128 G~~~---------------~i~~--~~l~~l~~g~~vvnvg 151 (243)
|.+. ++.. +.+....|.+++++++
T Consensus 82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 5421 1111 2345557888888864
No 491
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=97.08 E-value=0.0046 Score=56.47 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCcc-cCHHhhhcCCcEEEEccCChh----cccHHHHccCCCC
Q 037949 75 VGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPV-LTREDVVSEAGLFVTTTENAD----IIMVRHMKQMKNA 144 (243)
Q Consensus 75 IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~-~~~~~~~~~aDvvi~a~G~~~----~i~~~~l~~l~~g 144 (243)
=|..+|..|...|.+|+++|+++.+ .......|+.+ .+..+++.++|+||.|+.... ++. .....++++
T Consensus 31 gG~~MA~~La~aG~~V~v~Dr~~~~l~~~~~~~l~~~Gi~~asd~~eaa~~ADvVIlaVP~~~~v~~Vl~-~L~~~L~~g 109 (342)
T PRK12557 31 GGSRMAIEFAEAGHDVVLAEPNRSILSEELWKKVEDAGVKVVSDDAEAAKHGEIHILFTPFGKKTVEIAK-NILPHLPEN 109 (342)
T ss_pred CHHHHHHHHHhCCCeEEEEECCHHHhhHHHHHHHHHCCCEEeCCHHHHHhCCCEEEEECCCcHHHHHHHH-HHHhhCCCC
Confidence 3788999999999999999998863 33344567653 356677889999999976544 222 345667888
Q ss_pred eEEEEecCCC
Q 037949 145 AIVCNIGHFD 154 (243)
Q Consensus 145 ~~vvnvg~~~ 154 (243)
.++++++...
T Consensus 110 ~IVId~ST~~ 119 (342)
T PRK12557 110 AVICNTCTVS 119 (342)
T ss_pred CEEEEecCCC
Confidence 8999887654
No 492
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.08 E-value=0.0017 Score=60.79 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=50.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhh-cCCccc-----C---HHhh-hcCCcEEEEccCCh
Q 037949 66 IAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALT-EGIPVL-----T---REDV-VSEAGLFVTTTENA 130 (243)
Q Consensus 66 ~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~-~G~~~~-----~---~~~~-~~~aDvvi~a~G~~ 130 (243)
+++|+|+|.+|+.+++.|...|.+|+++|.++.+...... .|.++. + +.++ +.++|.++.+++..
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCCh
Confidence 6899999999999999999999999999999988755544 444321 1 2233 56899999887654
No 493
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.03 E-value=0.0024 Score=60.64 Aligned_cols=69 Identities=22% Similarity=0.255 Sum_probs=51.2
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHH-HhhcCCcccC---HHhhhcCCcEEEEccCC
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQ-ALTEGIPVLT---REDVVSEAGLFVTTTEN 129 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~-a~~~G~~~~~---~~~~~~~aDvvi~a~G~ 129 (243)
.+.+++|+|+|+|..|+++|+.|+..|++|+++|.++..... ....|+.+.. ..+.+.++|+||-..|.
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi 84 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGW 84 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCC
Confidence 367899999999999999999999999999999986654322 2234665421 23345678999887664
No 494
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.03 E-value=0.0016 Score=51.74 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=54.1
Q ss_pred EEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccC--------------HH-hhhcCCcEEEEccCChh
Q 037949 67 AVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLT--------------RE-DVVSEAGLFVTTTENAD 131 (243)
Q Consensus 67 vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~--------------~~-~~~~~aDvvi~a~G~~~ 131 (243)
++|+|+|.||...|..|+..|.+|.++.+.+ +.+.-.+.|..+.. .. .....+|++|.|+-+..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~~ 79 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAYQ 79 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecccc
Confidence 6899999999999999999999999999988 55444444542211 01 23457999999975533
Q ss_pred ---cccHHHHccCCCCeEEEEe
Q 037949 132 ---IIMVRHMKQMKNAAIVCNI 150 (243)
Q Consensus 132 ---~i~~~~l~~l~~g~~vvnv 150 (243)
+++ ..-..+.++..++..
T Consensus 80 ~~~~l~-~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 80 LEQALQ-SLKPYLDPNTTIVSL 100 (151)
T ss_dssp HHHHHH-HHCTGEETTEEEEEE
T ss_pred hHHHHH-HHhhccCCCcEEEEE
Confidence 232 223444566566543
No 495
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.02 E-value=0.0014 Score=58.41 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=71.9
Q ss_pred cccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCccc---------------C----------HHh
Q 037949 61 TIAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVL---------------T----------RED 115 (243)
Q Consensus 61 ~l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~---------------~----------~~~ 115 (243)
..++.+++++|.|-+|+..+...+..|+-|.-.|..+++.++-...|.+.. + ..+
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998887655554443211 1 012
Q ss_pred hhcCCcEEEEcc---CC--hhcccHHHHccCCCCeEEEEecCC
Q 037949 116 VVSEAGLFVTTT---EN--ADIIMVRHMKQMKNAAIVCNIGHF 153 (243)
Q Consensus 116 ~~~~aDvvi~a~---G~--~~~i~~~~l~~l~~g~~vvnvg~~ 153 (243)
.+++.|+||++. |. |.+++.++.+.||||.++|.....
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~ 283 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE 283 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence 346899999874 43 567888999999999999987643
No 496
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.99 E-value=0.0028 Score=59.81 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=50.2
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchh-----HHHHhhcCCccc---CHHhhhcCCcEEEEccCC
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLIC-----ALQALTEGIPVL---TREDVVSEAGLFVTTTEN 129 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r-----~~~a~~~G~~~~---~~~~~~~~aDvvi~a~G~ 129 (243)
+.+++|+|+|+|..|+++|+.|+..|++|.++|.++.. .......|+.+. ...+.+.++|+|+..+|-
T Consensus 12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi 87 (458)
T PRK01710 12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM 87 (458)
T ss_pred hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence 46899999999999999999999999999999987531 112334565432 123445678999888764
No 497
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0026 Score=54.55 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=34.4
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCE-EEEEeCCchhH
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGAR-VMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~-V~v~d~~~~r~ 100 (243)
+.+++++|+|+. .||..+++.+...|++ |+++++++...
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~ 44 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG 44 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 578999999975 8999999999999998 99999886543
No 498
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.99 E-value=0.0026 Score=54.12 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCC-hHHHHHHHHHHhCCCEEEEE-eCCchh
Q 037949 62 IAGKIAVDCGHG-DVGRGCAAALKAVGARVMGT-EIDLIC 99 (243)
Q Consensus 62 l~g~~vlViG~G-~IG~~~A~~l~~~Ga~V~v~-d~~~~r 99 (243)
++|++++|+|++ .||+.+++.+...|++|++. ++++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~ 41 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA 41 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 468999999986 89999999999999998764 555544
No 499
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.98 E-value=0.0026 Score=53.91 Aligned_cols=39 Identities=33% Similarity=0.396 Sum_probs=34.4
Q ss_pred ccCcEEEEEcC-ChHHHHHHHHHHhCCCEEEEEeCCchhH
Q 037949 62 IAGKIAVDCGH-GDVGRGCAAALKAVGARVMGTEIDLICA 100 (243)
Q Consensus 62 l~g~~vlViG~-G~IG~~~A~~l~~~Ga~V~v~d~~~~r~ 100 (243)
+.+++++|+|+ |.||+.+++.+...|++|+++++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~ 43 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA 43 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46899999996 5999999999999999999999986643
No 500
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.98 E-value=0.0027 Score=59.83 Aligned_cols=69 Identities=26% Similarity=0.215 Sum_probs=50.4
Q ss_pred ccCcEEEEEcCChHHHHHHHHHHhCCCEEEEEeCCchhHHHHhhcCCcccCH-HhhhcCCcEEEEccCCh
Q 037949 62 IAGKIAVDCGHGDVGRGCAAALKAVGARVMGTEIDLICALQALTEGIPVLTR-EDVVSEAGLFVTTTENA 130 (243)
Q Consensus 62 l~g~~vlViG~G~IG~~~A~~l~~~Ga~V~v~d~~~~r~~~a~~~G~~~~~~-~~~~~~aDvvi~a~G~~ 130 (243)
+.|+++.|+|.|..|+.+|..|+..|++|.++|..+.........|+..... .+.+.++|+||-..|-+
T Consensus 7 ~~~~~i~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 7 FAGKTVAVFGLGGSGLATARALVAGGAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 5689999999999999999999999999999997654332223456543221 22346789998776543
Done!