Query         037955
Match_columns 733
No_of_seqs    236 out of 1611
Neff          7.8 
Searched_HMMs 29240
Date          Mon Mar 25 09:58:54 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037955hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1y79_1 Peptidyl-dipeptidase DC 100.0  2E-121  8E-126 1072.2  68.2  644   49-724    14-679 (680)
  2 2o3e_A Neurolysin; thermolysin 100.0  2E-117  8E-122 1040.9  70.2  639   50-723    21-678 (678)
  3 2o36_A ThiMet oligopeptidase;  100.0  3E-116  1E-120 1030.0  69.2  642   48-724     3-663 (674)
  4 3sks_A Putative oligoendopepti 100.0 1.5E-69 5.1E-74  623.0  33.7  512   53-701     5-540 (567)
  5 3ahn_A Oligopeptidase, PZ pept 100.0 2.8E-67 9.7E-72  606.8  39.4  495   69-702    15-538 (564)
  6 3ce2_A Putative peptidase; str 100.0 1.3E-67 4.5E-72  614.1  31.4  530   64-720    33-594 (618)
  7 2qr4_A Peptidase M3B, oligoend 100.0 1.4E-64 4.7E-69  586.1  30.4  534   64-723     5-563 (587)
  8 1r42_A Angiotensin I convertin 100.0 6.8E-37 2.3E-41  355.4  45.4  508   87-722    25-589 (615)
  9 1uze_A Angiotensin converting  100.0   2E-37 6.9E-42  357.3  40.5  500   89-722    10-561 (589)
 10 3nxq_A Angiotensin-converting  100.0 2.1E-28 7.3E-33  277.5  34.2  504   92-722    22-575 (629)
 11 2x96_A Angiotensin converting   99.9 1.5E-22 5.2E-27  232.2  46.1  510   89-722    11-571 (598)
 12 1ka2_A M32 carboxypeptidase; h  99.9 6.2E-21 2.1E-25  211.1  41.8  419  125-721    47-494 (499)
 13 3hq2_A Bacillus subtilis M32 c  99.9 1.8E-18 6.1E-23  190.4  42.2  419  125-721    44-491 (501)
 14 3hoa_A Thermostable carboxypep  99.8 1.4E-16 4.7E-21  176.0  42.4  411  125-721    44-501 (509)
 15 3dwc_A TCMCP-1, metallocarboxy  99.8 2.9E-16   1E-20  173.0  43.4  414  125-721    43-496 (505)
 16 2x7m_A Archaemetzincin; metall  75.5     4.2 0.00014   39.2   6.2   56  398-453    36-103 (195)
 17 4axq_A Archaemetzincin; metall  70.0     6.2 0.00021   36.9   5.7  103  399-515    16-127 (163)
 18 1kap_P Alkaline protease; calc  69.8      13 0.00044   41.0   9.2   23  398-420   102-124 (479)
 19 2jsd_A Matrix metalloproteinas  67.7     2.1 7.3E-05   39.7   2.0   22  399-420    28-49  (160)
 20 2xs4_A Karilysin protease; hyd  65.9     2.4 8.3E-05   39.7   2.0   22  399-420    31-52  (167)
 21 1hy7_A Stromelysin-1, MMP-3; m  63.9     2.8 9.6E-05   39.6   2.0   22  399-420    33-54  (173)
 22 2ovx_A Matrix metalloproteinas  63.4     2.5 8.4E-05   39.4   1.5   22  399-420    30-51  (159)
 23 1cge_A Fibroblast collagenase;  61.9     2.7 9.2E-05   39.5   1.5   22  399-420    31-52  (168)
 24 1g9k_A Serralysin; beta jelly   60.4      24 0.00081   38.7   9.0   20  399-418    87-106 (463)
 25 1hv5_A Stromelysin 3; inhibiti  58.3     3.4 0.00012   38.6   1.5   22  399-420    32-53  (165)
 26 3dte_A IRRE protein; radiotole  58.0     5.6 0.00019   41.1   3.2   30  479-517    82-111 (301)
 27 1c7k_A NCNP, zinc endoprotease  56.7     4.4 0.00015   36.4   1.9   15  501-515    76-90  (132)
 28 1i76_A MMP-8;, neutrophil coll  55.8     4.7 0.00016   37.6   2.0   22  399-420    32-53  (163)
 29 3edh_A Bone morphogenetic prot  54.6      19 0.00064   34.8   6.2   17  502-518    87-103 (201)
 30 3lq0_A Proastacin; metallopept  52.1      34  0.0012   33.8   7.7   18  502-519   120-137 (235)
 31 4dv8_A Lethal factor; endopept  50.6     6.3 0.00022   42.4   2.1   19  501-519   429-447 (526)
 32 1slm_A Stromelysin-1; hydrolas  49.2     5.7  0.0002   40.0   1.5   22  399-420   115-136 (255)
 33 3ayu_A 72 kDa type IV collagen  48.2     6.2 0.00021   36.9   1.5   22  399-420    33-54  (167)
 34 1y93_A Macrophage metalloelast  47.9     6.3 0.00022   36.6   1.5   22  399-420    28-49  (159)
 35 1rm8_A MMP-16, matrix metallop  45.7     8.5 0.00029   36.0   2.0   22  399-420    27-48  (169)
 36 2y6d_A Matrilysin; hydrolase;   45.7     8.5 0.00029   36.3   2.0   23  398-420    33-55  (174)
 37 1j7n_A Lethal factor precursor  44.3      10 0.00034   42.6   2.5   18  501-518   679-696 (776)
 38 1sat_A Serratia protease; para  40.7      10 0.00036   41.7   2.0   22  400-421    88-109 (471)
 39 1bud_A Protein (acutolysin A);  40.2     9.7 0.00033   36.5   1.5   14  501-514   132-145 (197)
 40 2w15_A Zinc metalloproteinase   39.8     9.9 0.00034   36.6   1.5   14  501-514   135-148 (202)
 41 1qua_A Acutolysin-C, hemorrhag  39.4      10 0.00035   36.4   1.5   14  501-514   134-147 (197)
 42 3o0y_A Lipoprotein; structural  38.1      80  0.0027   35.8   8.8  167  500-697   430-601 (609)
 43 1k7i_A PROC, secreted protease  37.8      12 0.00042   41.2   2.0   22  400-421   104-125 (479)
 44 1kuf_A Atrolysin E, metallopro  37.3      11 0.00039   36.2   1.5   14  501-514   137-150 (203)
 45 1atl_A Atrolysin C; metalloend  37.0      12  0.0004   36.1   1.5   14  501-514   135-148 (202)
 46 1yp1_A FII; FII hydrolase; 1.9  36.8      12  0.0004   36.1   1.5   14  501-514   134-147 (202)
 47 3b8z_A Protein adamts-5; alpha  36.7      12  0.0004   36.5   1.5   14  501-514   140-153 (217)
 48 830c_A MMP-13, MMP-13; matrix   36.6      12 0.00042   35.0   1.5   23  399-421    33-55  (168)
 49 3ma2_D Matrix metalloproteinas  34.5      14 0.00047   35.1   1.5   24  397-420    29-52  (181)
 50 3iuk_A Uncharacterized protein  34.3   1E+02  0.0034   34.6   8.8  169  499-697   379-560 (562)
 51 2v4b_A Adamts-1; zymogen, prot  33.0      14 0.00049   37.8   1.5   14  501-514   142-155 (300)
 52 3lqb_A Hatching enzyme, LOC792  32.8      16 0.00054   35.2   1.7   17  502-518    93-109 (199)
 53 3cqb_A Probable protease HTPX   32.6      16 0.00055   31.3   1.5   18  499-516    79-97  (107)
 54 2ddf_A ADAM 17; hydrolase; HET  31.7      16 0.00054   36.6   1.5   13  502-514   182-194 (257)
 55 1r55_A ADAM 33; metalloproteas  31.5      16 0.00055   35.5   1.5   14  501-514   135-148 (214)
 56 2rjp_A Adamts-4; metalloprotea  29.9      17 0.00059   37.5   1.5   14  501-514   142-155 (316)
 57 2cki_A Ulilysin; metalloprotea  29.8      17 0.00058   36.7   1.3   15  501-515   161-175 (262)
 58 2rjq_A Adamts-5; metalloprotea  29.0      18 0.00062   38.4   1.5   14  501-514   142-155 (378)
 59 4dd8_A Disintegrin and metallo  27.3      21 0.00072   34.4   1.5   12  503-514   134-145 (208)
 60 2i47_A ADAM 17; TACE-inhibitor  26.5      22 0.00075   36.2   1.5   13  502-514   188-200 (288)
 61 1l6j_A Matrix metalloproteinas  25.8      23 0.00077   38.3   1.5   15  501-515   375-389 (425)
 62 2ero_A VAP-1, vascular apoptos  25.7      23 0.00077   38.4   1.5   14  501-514   145-158 (427)
 63 1eak_A 72 kDa type IV collagen  25.6      23 0.00078   38.2   1.5   15  501-515   365-379 (421)
 64 2dw0_A Catrocollastatin; apopt  24.9      24 0.00081   38.2   1.5   14  501-514   136-149 (419)
 65 3ba0_A Macrophage metalloelast  24.5      27 0.00093   36.9   1.9   23  398-420    26-48  (365)
 66 2vqx_A Metalloproteinase; ther  24.4      32  0.0011   36.0   2.3   27  501-527   155-181 (341)
 67 3b4r_A Putative zinc metallopr  24.1      31  0.0011   33.8   2.0   18  502-519    48-65  (224)
 68 2ejq_A Hypothetical protein TT  23.9      36  0.0012   30.3   2.3   20  503-522    90-109 (130)
 69 2e3x_A Coagulation factor X-ac  23.1      23 0.00079   38.3   1.0   14  501-514   138-151 (427)
 70 2qn0_A Neurotoxin; botulism, s  21.9      42  0.0014   35.4   2.6   22  499-520   220-241 (430)
 71 2wl8_A Peroxisomal biogenesis   21.7 2.4E+02  0.0083   24.8   7.1   26  126-151    13-38  (126)
 72 3k7n_A K-like; SVMP, hydrolase  21.5      31   0.001   37.0   1.5   14  501-514   138-151 (397)
 73 3bon_A Neurotoxin A; metallopr  20.9      46  0.0016   35.1   2.6   21  500-520   215-235 (425)
 74 2fpq_A Botulinum neurotoxin D   20.8      46  0.0016   35.3   2.6   21  500-520   229-249 (444)
 75 2zrr_A Mundticin KS immunity p  20.8 3.7E+02   0.013   23.3   7.8   68  124-193    34-110 (118)
 76 2a97_A BONT/F, botulinum neuro  20.7      46  0.0016   35.2   2.6   22  499-520   218-239 (439)
 77 1e1h_A BONT/A LC, botulinum ne  20.3      50  0.0017   32.8   2.6   21  500-520   252-272 (287)
 78 3p1v_A Metallo-endopeptidase;   20.1      27 0.00091   37.3   0.6   16  503-518   288-303 (407)
 79 1bqb_A Protein (aureolysin); h  20.0      38  0.0013   34.7   1.8   23  502-524   138-160 (301)

No 1  
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli}
Probab=100.00  E-value=2.2e-121  Score=1072.24  Aligned_cols=644  Identities=23%  Similarity=0.361  Sum_probs=595.0

Q ss_pred             CCCCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHcC---CChHHHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHHH
Q 037955           49 TGLYGFDHLKSPNGFQRFVDDAIERSSELVNYISEM---PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEAS  125 (733)
Q Consensus        49 ~gl~~~~~l~~p~~~~~~~~~~i~~~~~~i~~i~~~---~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~  125 (733)
                      .|+|+|+.+ +|++|.++++++++++++.|++|.+.   ++++|+|.+++++++.||++++++++++++++++++|++++
T Consensus        14 ~~~p~f~~i-~~~~~~~a~~~~~~~~~~~i~~i~~~~~~~t~~n~i~~le~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~   92 (680)
T 1y79_1           14 YLAPHFDQI-ANHHYRPAFDEGMQQKRAEIAAIALNPQMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDE   92 (680)
T ss_dssp             GGCCCTTTC-CGGGHHHHHHHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred             CCCCCcCCC-CHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            478889888 79999999999999999999999764   68999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 037955          126 KASMRISEYLHYLNTNHTLYDAVKKAEL--DGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFN  203 (733)
Q Consensus       126 ~~~~~l~~~~~~l~~~~~Ly~~l~~~~~--~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~  203 (733)
                      ++.++++++.+++++|++||++++++..  ....|++|++|+++..+++|+++|++|++++|+++.+|+.++++|+++|+
T Consensus        93 ~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~~~~~L~~e~~r~~~~~l~~f~~~G~~L~~~~~~~~~~l~~~l~~L~~~f~  172 (680)
T 1y79_1           93 QFSAELAELANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFN  172 (680)
T ss_dssp             HHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHhChhhccCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999832  23469999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCC--Cc---ccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCC-EEEecCCCcHHHHhhhCCCHHHH
Q 037955          204 QNIINDPG--HV---DIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKG-FRITTDSRILQSILQWTSDDEVR  277 (733)
Q Consensus       204 ~ni~~~~~--~v---~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~vL~~~~d~~~R  277 (733)
                      +|+.+++.  .+   +..+|+|||+++++.++..+              ...+.+| +.++++.+.+.++|++++|+++|
T Consensus       173 ~n~~~~~~~~~~~~~~~~~L~Glp~~~~~~~~~~a--------------~~~g~~G~~~~~l~~~~~~~~l~~~~dr~~R  238 (680)
T 1y79_1          173 QRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAA--------------REKGLDNKWLIPLLNTTQQPALAEMRDRATR  238 (680)
T ss_dssp             HHHHHHHHTCSEEESCGGGGTTSCHHHHHHHHHHH--------------HHTTCTTCEEECCCSSSSCGGGGTCCCHHHH
T ss_pred             HHHHHhhhcceEEecCHHHhcCCCHHHHHHHHHHH--------------HhcCCCCcEEEecchhhHHHHHhhCcCHHHH
Confidence            99997662  12   33579999999999987642              2223356 99999999999999999999999


Q ss_pred             HHHHHHhccCC-----cchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 037955          278 KMVYIQGHSVP-----QANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVVKSFLLEMSKMIKPKADEEFEAI  352 (733)
Q Consensus       278 k~~~~a~~~~~-----~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L  352 (733)
                      |++|+|+.+..     .+|..+|.+|+++|+++|++|||+||+++++.++|++||++|.+||++|.+.++|.+++|++.|
T Consensus       239 k~~~~a~~~~~~~~~~~~n~~~l~~i~~lR~~~A~llGy~s~a~~~l~~~ma~t~e~V~~fL~~l~~~~~p~a~~e~~~l  318 (680)
T 1y79_1          239 EKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASI  318 (680)
T ss_dssp             HHHHHHHHTTTCSSSTTCCHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998754     5799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHH-HHHHHHHHHhhCceeEeecCCCCCcccccc
Q 037955          353 KNFKRKSCGQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCI-EGLKMLAESLFGVTFHSVPLAPGESWHPDV  431 (733)
Q Consensus       353 ~~~~~~~~g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl-~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV  431 (733)
                      ++++++.+|  .++|+|||+.||.++.++.++++|++++++|||++.|+ +|++.+++++||++|+++..  .++|||||
T Consensus       319 ~~~~~~~~g--~~~l~~wD~~yy~~~~~~~~~~~de~~~~~yF~l~~vl~~gl~~~~~~lfG~~~~~~~~--~~~whpdV  394 (680)
T 1y79_1          319 QAVIDKQQG--GFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFD--IPVYHPDV  394 (680)
T ss_dssp             HHHHHHTTC--CSCCCHHHHHHHHHHHHHHHHSCCGGGTGGGCBHHHHHHHTHHHHHHHHHCCEEEEESS--SCCSSTTC
T ss_pred             HHHHHHhcC--CCCCCHHHHHHHHHHHHHHhcCCCHHHhcccCCHHHHHHHHHHHHHHHhcCCeEEECCC--CccCCCcc
Confidence            999988877  46799999999999999999999999999999999999 99999999999999999874  47999999


Q ss_pred             ceeEEEcCCCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCC-CCCcChhhHHHHHHHH
Q 037955          432 LKLSLQHPEEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNL-SVRLNHHEVETLFHEF  510 (733)
Q Consensus       432 ~~~~v~d~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~-~~lL~~~~v~TLfHEf  510 (733)
                      ++|+|++.+|+++|.+|+|+|+|+||++||||+++++++.. +|  +.|+++|+|||++|.++ |+||+++||.||||||
T Consensus       395 ~~~~v~~~~~~~~g~~ylD~~~R~gKr~Ga~~~~~~~~~~~-~~--~~Pv~~i~~Nf~~p~~~~p~LLt~~dV~TLfHE~  471 (680)
T 1y79_1          395 RVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTL-NK--THPVIYNVCNYQKPAAGEPALLLWDDVITLFHEF  471 (680)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECCTTSCSSCEEEEEECCBTT-TT--BCCEEEEEEEECCCCTTSCCBCCHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCEEeeEEEeecCCCCCCCCeeeccccccccC-CC--cCCeEEEeccCCCCCCCCCCcCCHHHHHHHHHHH
Confidence            99999998899999999999999999999999999887654 33  67999999999999865 4999999999999999


Q ss_pred             HHHHHHhhhcCCCCccCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHH
Q 037955          511 GHALHSLLSRTDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQI  590 (733)
Q Consensus       511 GHalH~lls~~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql  590 (733)
                      |||||++++++.|+.++|+++++||||+|||+||+|||+|++|..+++||+||+++|++++++|.++++++.++.+++|+
T Consensus       472 GHalH~~ls~~~~~~~sgt~~~~d~vE~pS~~~E~~~~~p~~L~~~~~h~~t~e~~p~~l~~~l~~~~~~~~~~~~~rq~  551 (680)
T 1y79_1          472 GHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELL  551 (680)
T ss_dssp             HHHHHHHTCCCSSGGGSTTCSCHHHHHHHHHHHHHGGGSHHHHHHHCBCTTTCCBCCHHHHHHHHHTTTTTHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccccCccccchhhhccchhhhhHhcCHHHHHHHHhhccCCCcCCHHHHHHHHHHHhhchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHhhcC-CCCCCCCHHHHHHHHHhhccCC-CCCCCCcccccccccc--cccccchhHHHHHHHHHHHHHHHHHc
Q 037955          591 FYALVDQTLFGE-RLGQTRDTSSIVADMKRQHTSW-NHVEGTHWHIRFSHFI--NYGAGYYSYLYAKCFAATIWQKLCQE  666 (733)
Q Consensus       591 ~~a~fD~~lh~~-~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~f~Hl~--~Y~a~YYsYl~s~v~A~di~~~~~~~  666 (733)
                      .++.||+.+|.. .+.+..++.++|.++++++..+ +.++..+|+++|+|||  ||+++||+|+||+|+|+++|+.|.++
T Consensus       552 ~~a~fD~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Hif~ggY~a~yYsY~~a~vla~~~~~~f~e~  631 (680)
T 1y79_1          552 SAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQ  631 (680)
T ss_dssp             HHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHTTCCBTTBCCSSCGGGCHHHHTSSCTTTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCcccCHHHHHHHHHHHhCCCCCCCCCCCccCcccceecCCcCCCcHhHHHHHHHHHHHHHHHHHc
Confidence            999999999984 2224568999999999999654 5556677889999999  79999999999999999999999888


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcCCC
Q 037955          667 DPLSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVKLM  724 (733)
Q Consensus       667 ~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g~~  724 (733)
                      |++|+++|++||++||+.|||++|++++++|+||          +|++++|+++.||.
T Consensus       632 g~~~~~~g~~y~~~iL~~GGs~~~~el~~~f~G~----------dp~~~a~l~~~Gl~  679 (680)
T 1y79_1          632 GGLTRENGLRFREAILSRGNSEDLERLYRQWRGK----------APKIMPMLQHRGLN  679 (680)
T ss_dssp             TSSCHHHHHHHHHHTTTTTTSSCHHHHHHHHHSS----------CCCSHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHhhCCCCccHHHHHHHhcCC----------CCChhHHHHHCCCC
Confidence            8899999999998899999999999999999999          59999999999984


No 2  
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P
Probab=100.00  E-value=2.3e-117  Score=1040.93  Aligned_cols=639  Identities=25%  Similarity=0.450  Sum_probs=592.0

Q ss_pred             CCCCCC-CCCCcCChHHHHHHHHHHHHHHHHHHHc-C---CChHHHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHH
Q 037955           50 GLYGFD-HLKSPNGFQRFVDDAIERSSELVNYISE-M---PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEA  124 (733)
Q Consensus        50 gl~~~~-~l~~p~~~~~~~~~~i~~~~~~i~~i~~-~---~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa  124 (733)
                      |+|.|+ .+ +|++|.++++++++++++.|++|.+ .   ++++++|.+++++++.||++++.+.+++++++++++++++
T Consensus        21 ~~p~~~~~~-~~~~~~~a~~~~~~~~~~~i~~i~~~~~~~~t~~~~i~~le~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   99 (678)
T 2o3e_A           21 GRNVLRWDL-SPEQIKTRTEQLIAQTKQVYDTVGTIALKEVTYENCLQVLADIEVTYIVERTMLDFPQHVSSDREVRAAS   99 (678)
T ss_dssp             TTCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHHHHCSCHHHHHHH
T ss_pred             CCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence            566666 55 7999999999999999999999976 3   5899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 037955          125 SKASMRISEYLHYLNTNHTLYDAVKKAELD--GHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREF  202 (733)
Q Consensus       125 ~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~--~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F  202 (733)
                      +++.++++++.+++++|++||++|+++...  ...|++|++|+++..+++|+++|++|+++.|+++.+|+.++++|+.+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~e~~r~~~~~l~~f~~~g~~L~~~~r~~~~~l~~e~~~L~~~f  179 (678)
T 2o3e_A          100 TEADKKLSRFDIEMSMREDVFQRIVHLQETCDLEKIKPEARRYLEKSIKMGKRNGLHLSEHIRNEIKSMKKRMSELCIDF  179 (678)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHCCTTSSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHcccccccCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998322  235999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCCCc--ccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCC-EEEecCCCcHHHHhhhCCCHHHHHH
Q 037955          203 NQNIINDPGHV--DIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKG-FRITTDSRILQSILQWTSDDEVRKM  279 (733)
Q Consensus       203 ~~ni~~~~~~v--~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~vL~~~~d~~~Rk~  279 (733)
                      ++|+.+++..+  ...+|.|+|+++++.++..                   .+| |.++++.+.+.++|++++|+++||+
T Consensus       180 ~~n~~~~~~~~~~~~~~l~glp~~~~~~~~~~-------------------~~g~~~~~l~~~~~~~~l~~~~dr~~Rk~  240 (678)
T 2o3e_A          180 NKNLNEDDTSLVFSKAELGALPDDFIDSLEKT-------------------DEDKYKVTLKYPHYFPVMKKCCVPETRRK  240 (678)
T ss_dssp             HHHHHHCCCEEEEETTTTTTCCHHHHHTSCBC-------------------SSSEEEEESSHHHHHHHHHHCCCHHHHHH
T ss_pred             HHhhhhcccceEEehHhhcCCCHHHHHHHHhc-------------------cCCCEEEEccCccHHHHHhcCCCHHHHHH
Confidence            99999887532  2268999999999988642                   123 5899999999999999999999999


Q ss_pred             HHHHhccCCc-chHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 037955          280 VYIQGHSVPQ-ANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRK  358 (733)
Q Consensus       280 ~~~a~~~~~~-~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~  358 (733)
                      +|+|+.+... +|.++|.+|+++|+++|+++||+||+++++..+|++||++|.+||++|.+.++|.+++|++.|+++++.
T Consensus       241 a~~a~~~~~~~~n~~~l~~i~~lR~~~A~llGy~s~a~~~l~~~ma~~pe~V~~fl~~L~~~~~~~a~~e~~~L~~~~~~  320 (678)
T 2o3e_A          241 MEMAFHTRCKQENTAILQQLLPLRAQVAKLLGYNTHADFVLELNTAKSTSRVAAFLDDLSQKLKPLGEAEREFILSLKKK  320 (678)
T ss_dssp             HHHHHTTTTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccchhhHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998876 699999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             hc---CCC-CCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCcccccccee
Q 037955          359 SC---GQK-YVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKL  434 (733)
Q Consensus       359 ~~---g~~-~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~  434 (733)
                      ..   |.. .++++|||+.||.+++++.++++|++++++|||++.|++|++.+++++||++|+++.  ++++|||||++|
T Consensus       321 ~~~~~~~~~~~~l~~wD~~yy~~~~~~~~~~~de~~l~~YF~l~~v~~gv~~~~~~lfG~~~~~~~--~~~~wh~dV~~f  398 (678)
T 2o3e_A          321 ECEERGFEYDGKINAWDLHYYMTQTEELKYSVDQESLKEYFPIEVVTEGLLSIYQELLGLSFEQVP--DAHVWNKSVSLY  398 (678)
T ss_dssp             HHHHTTCCCCSSCCHHHHHHHHHHHHHHHTCCCHHHHGGGCBHHHHHHHHHHHHHHHHTEEEEECT--TCCCSSTTCEEE
T ss_pred             hcCcccccccCCCCHhhHHHHHHHHHHhhcCCChHHhcccCcHHHHHHHHHHHHHHHcCCeEEECC--CCCCCCCcceEE
Confidence            42   210 126999999999999999999999999999999999999999999999999999986  478999999999


Q ss_pred             EEEc-CCCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCC-CCCcChhhHHHHHHHHHH
Q 037955          435 SLQH-PEEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNL-SVRLNHHEVETLFHEFGH  512 (733)
Q Consensus       435 ~v~d-~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~-~~lL~~~~v~TLfHEfGH  512 (733)
                      +|+| ++|+++|.+|+|+|+|+||++||||+++++++...+|.++.|+++|+|||++|.++ |+||+|+||.||||||||
T Consensus       399 ~v~d~~~g~~~g~~y~D~~~R~gKr~Ga~~~~~~~~~~~~~~~~~~Pv~~i~~Nf~~p~~~~p~Llt~~dV~TLfHE~GH  478 (678)
T 2o3e_A          399 TVKDKATGEVLGQFYLDLYPREGKYNHAACFGLQPGCLLPDGSRMMSVAALVVNFSQPVAGRPSLLRHDEVETYFHEFGH  478 (678)
T ss_dssp             EEEETTTCCEEEEEEEECSCCTTSCCSCEEEEEECCBBCTTSCBCCEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCeEEEEEeeccCCCCCCCCceecccccccccCCCCccCCeEEEEcccCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            9999 68899999999999999999999999999988777888899999999999998865 499999999999999999


Q ss_pred             HHHHhhhcCCCCccCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHH
Q 037955          513 ALHSLLSRTDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFY  592 (733)
Q Consensus       513 alH~lls~~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~  592 (733)
                      |||++++++.|++++|+++++||||+|||+||+|+|+|++|+.|++||+||+++|.+++++++++++++.|+.+++|+.+
T Consensus       479 alH~~ls~~~~~~~~gt~~~~d~vE~pS~~~E~~~~~~~~L~~~~~h~~t~e~~p~~ll~~~~~~~~~~~~~~~~~q~~~  558 (678)
T 2o3e_A          479 VMHQICAQTDFARFSGTNVERDFVEVPSQMLENWVWDVDSLRKLSKHYKDGHPITDELLEKLVASRLVNTGLLTLRQIVL  558 (678)
T ss_dssp             HHHHHHCCBSSGGGSTTCSCTTTTTHHHHHHHGGGGCHHHHHHHCCCSSSCCCCCHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred             HHHHHHhcCCchhcCCCCCcchHHhhhHHHHHHHHcCHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            99999999998889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCCCCcccccccccc-cccccchhHHHHHHHHHHHH-HHHHHcCCCC
Q 037955          593 ALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVEGTHWHIRFSHFI-NYGAGYYSYLYAKCFAATIW-QKLCQEDPLS  670 (733)
Q Consensus       593 a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~f~Hl~-~Y~a~YYsYl~s~v~A~di~-~~~~~~~~~~  670 (733)
                      +.||+.+|+..+   .++.++|.++++++.+.+.++..+||++|+||| ||+++||+|+||+++|+++| +.|.++|++|
T Consensus       559 a~fD~~~h~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~Hif~gY~a~YYsY~~a~vlaa~~~~~~f~~~g~~~  635 (678)
T 2o3e_A          559 SKVDQSLHTNAT---LDAASEYAKYCTEILGVAATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSMDMFHSCFKKEGIMN  635 (678)
T ss_dssp             HHHHHHHTTCTT---SCHHHHHHHHHHHHTSSCCCTTCCGGGGCTTSSSSCTTCTTHHHHHHHHHHHHHHHTHHHHCTTC
T ss_pred             HHHHHHHhcCCC---CCHHHHHHHHHHHhCCCCCCCCCCCccchhhhhcCCcCCcHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999998533   589999999999999987777778889999998 79999999999999999999 7787778899


Q ss_pred             HHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcCC
Q 037955          671 LTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVKL  723 (733)
Q Consensus       671 ~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g~  723 (733)
                      +++|++||++||+.|||++|++++++|+|+          +|++++|+++.||
T Consensus       636 ~~~g~~y~~~iL~~GGs~~~~el~~~f~G~----------d~~~~a~l~~~gl  678 (678)
T 2o3e_A          636 PEVGMKYRNLILKPGGSLDGMDMLQNFLQR----------EPNQKAFLMSRGL  678 (678)
T ss_dssp             HHHHHHHHHHHTTTGGGSCHHHHHHHHHTS----------CCCSHHHHHHHTC
T ss_pred             HHHHHHHHHHHhhcCCCcCHHHHHHHHhCC----------CCChHHHHHHcCC
Confidence            999999998899999999999999999999          5999999999986


No 3  
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Probab=100.00  E-value=3e-116  Score=1029.96  Aligned_cols=642  Identities=25%  Similarity=0.452  Sum_probs=591.9

Q ss_pred             CCCCCCCC-CCCCcCChHHHHHHHHHHHHHHHHHHHc-C---CChHHHHHHHHHhhHHHhhhhchhhhhhccCCchHHHH
Q 037955           48 PTGLYGFD-HLKSPNGFQRFVDDAIERSSELVNYISE-M---PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVE  122 (733)
Q Consensus        48 ~~gl~~~~-~l~~p~~~~~~~~~~i~~~~~~i~~i~~-~---~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~  122 (733)
                      -.++|.|+ .+ +|++|.++++++++++++.|++|.+ .   +++.++|.++|++++.||++++.+.+++++++++++++
T Consensus         3 ~~~~p~f~~~~-~~~~~~~a~~~~~~~~~~~i~~i~~~~~~~~~~~~~l~~le~~~~~l~~~~~~~~~~~~~~~~~~~~~   81 (674)
T 2o36_A            3 CSVVNDLRWDL-SAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVSPSKDIRT   81 (674)
T ss_dssp             ------CCCCC-CHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHHHHCSCHHHHH
T ss_pred             CCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence            35788888 77 7999999999999999999999987 4   68999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCHHHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Q 037955          123 EASKASMRISEYLHYLNTNHTLYDAVKKAELDG--HLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCR  200 (733)
Q Consensus       123 aa~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~--~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~  200 (733)
                      +++++.++++++.+++++|++||++++++....  ..|++|++|+++..+++|+++|++|+++.|+++.+|+.++++|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~e~~~~~~~~l~~f~~~g~~L~~~~r~~~~~l~~el~~L~~  161 (674)
T 2o36_A           82 ASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCI  161 (674)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcccccccCCHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999983222  369999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCc--ccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCC-EEEecCCCcHHHHhhhCCCHHHH
Q 037955          201 EFNQNIINDPGHV--DIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKG-FRITTDSRILQSILQWTSDDEVR  277 (733)
Q Consensus       201 ~F~~ni~~~~~~v--~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~vL~~~~d~~~R  277 (733)
                      +|++|+.+++...  ...+|.|+|+++++.++..               .    +| |.++++.+.+.++|++++|+++|
T Consensus       162 ~f~~n~~~~~~~~~~~~~~l~glp~~~~~~~~~~---------------~----~G~~~~~l~~~~~~~~l~~~~dr~~R  222 (674)
T 2o36_A          162 DFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKM---------------E----DGKLKVTLKYPHYFPLLKKCHVPETR  222 (674)
T ss_dssp             HHHHHHHHCCCEEEECTTTTTTSCHHHHTTSEEC---------------T----TSCEEEESSHHHHHHHHHHCCCHHHH
T ss_pred             HHHHHhhhccccceeehhhhcCCCHHHHHHHHHh---------------c----CCCeEEEecCccHHHHHhhCCCHHHH
Confidence            9999999887422  1268999999999888652               1    23 79999999999999999999999


Q ss_pred             HHHHHHhccCCc-chHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 037955          278 KMVYIQGHSVPQ-ANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFK  356 (733)
Q Consensus       278 k~~~~a~~~~~~-~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~  356 (733)
                      |++|+|+.+... +|..+|.+|+++|+++|+++||+||+++++..+|++||++|.+||.++.+.++|.+++|++.|++++
T Consensus       223 k~~~~a~~~~~~~~n~~~l~~i~~lR~~~A~llGy~s~a~~~l~~~ma~tp~~V~~fL~~l~~~~~p~~~~e~~~L~~~~  302 (674)
T 2o36_A          223 RKVEEAFNSRCKEENSAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELK  302 (674)
T ss_dssp             HHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998876 5999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC----CCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccc
Q 037955          357 RKSCGQK----YVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVL  432 (733)
Q Consensus       357 ~~~~g~~----~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~  432 (733)
                      ++.+|..    .++++|||+.||.+++++.++++|.+++++|||++.|++|++.+++++||++|+++.  ++++|||||+
T Consensus       303 ~~~~g~~~~~~~~~l~~wD~~y~~~~~~~~~~~~d~~~~~~yF~l~~vl~gl~~~~~~lfg~~~~~~~--~~~~wh~dV~  380 (674)
T 2o36_A          303 RAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLGLAFHHEE--GASAWHEDVR  380 (674)
T ss_dssp             HHHHHHHTCCCCSSCCTTTHHHHHHHHHHHHTCCCHHHHGGGCBHHHHHHHHHHHHHHHHTEEEEECT--TCCCSSTTCE
T ss_pred             HHhcCCCcccccCCCCHHHHHHHHHHHHHHhcCCCHHHHhhhCcHHHHHHHHHHHHHHHcCCeEEecC--CCCCcCCcce
Confidence            8876621    127999999999999999999999999999999999999999999999999999876  4789999999


Q ss_pred             eeEEEcC-CCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCC-CCCcChhhHHHHHHHH
Q 037955          433 KLSLQHP-EEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNL-SVRLNHHEVETLFHEF  510 (733)
Q Consensus       433 ~~~v~d~-~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~-~~lL~~~~v~TLfHEf  510 (733)
                      .|+|+++ +|+++|.+|+|+|+|+||++||||+++++++...+|.++.|+++|+|||++|.++ |+||+++||.||||||
T Consensus       381 ~~~v~~~~~~~~lg~~y~D~~~R~gKr~Ga~~~~~~~~~~~~~g~~~~Pv~~i~~Nf~~p~~~~p~Llt~~dV~TLfHE~  460 (674)
T 2o36_A          381 LYTARDAASGEVVGKFYLDLYPREGKYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVRTYFHEF  460 (674)
T ss_dssp             EEEEEETTTCCEEEEEEEECSCCTTSCCSCEEEEEECCEECTTSCEECEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEEeccCCCCCCCCceecccccccccCCCCccCCeeEEEeccCCCCCCCCCcCCHHHHHHHHHHH
Confidence            9999986 6889999999999999999999999999988877787789999999999998865 4999999999999999


Q ss_pred             HHHHHHhhhcCCCCccCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHH
Q 037955          511 GHALHSLLSRTDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQI  590 (733)
Q Consensus       511 GHalH~lls~~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql  590 (733)
                      |||||+++++++|+.++|+++++||||+|||+||+|+|+|++|+.|++||+||+++|.+++++|..+++++.++.+++|+
T Consensus       461 GHalH~~ls~~~~~~~~g~~~~~d~aE~pS~~~E~~~~~~~~L~~~~~h~~t~e~~~~~l~~~l~~~~~~~~~~~~~~q~  540 (674)
T 2o36_A          461 GHVMHQLCSQAEFAMFSGTHVETDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQI  540 (674)
T ss_dssp             HHHHHHHHCCCSSGGGSTTCSCTTTTTHHHHHHHGGGGSHHHHHHTCCCTTTCCCCCHHHHHHHHHGGGTTHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcccccCCCccccHHHHHHHHHHHHHcCHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCCCCcccccccccc-cccccchhHHHHHHHHHHHH-HHHHHcCC
Q 037955          591 FYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVEGTHWHIRFSHFI-NYGAGYYSYLYAKCFAATIW-QKLCQEDP  668 (733)
Q Consensus       591 ~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~f~Hl~-~Y~a~YYsYl~s~v~A~di~-~~~~~~~~  668 (733)
                      .++.||+.+|+..+   .++.++|.++++++.+.+.+++.+|+++|+||| ||+++||+|+||+++|+++| +.|.++|+
T Consensus       541 ~~a~fd~~~h~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~HifggY~a~YY~Y~~a~v~aa~~~~~~f~~~g~  617 (674)
T 2o36_A          541 VLAKVDQALHTQTD---ADPAEEYARLCQEILGVPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGV  617 (674)
T ss_dssp             HHHHHHHHHTTCSS---CCHHHHHHHHHHHTTSSCCCTTCCGGGGCGGGGTTCTTCTTHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHhcCCc---CCHHHHHHHHHHHhcCCCCCCCCCcccccccccCCcCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999998533   589999999999999987767777889999999 79999999999999999999 77777789


Q ss_pred             CCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcCCC
Q 037955          669 LSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVKLM  724 (733)
Q Consensus       669 ~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g~~  724 (733)
                      +|+++|++||++||+.|||++|++++++|+|+          +|++++|++..||.
T Consensus       618 ~~~~~g~~y~~~iL~~Ggs~~~~el~~~f~G~----------d~~~~a~l~~~gl~  663 (674)
T 2o36_A          618 LNSKVGMDYRSCILRPGGSEDASAMLRRFLGR----------DPKQDAFLLSKGLQ  663 (674)
T ss_dssp             TCHHHHHHHHHHTTTTGGGSCHHHHHHHHHSS----------CCCSHHHHHHTTC-
T ss_pred             CCHHHHHHHHHHHhhCCCCcCHHHHHHHHhCC----------CCChHHHHHHCCCC
Confidence            99999999998899999999999999999999          59999999999996


No 4  
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=100.00  E-value=1.5e-69  Score=623.05  Aligned_cols=512  Identities=15%  Similarity=0.192  Sum_probs=405.9

Q ss_pred             CCCCCCCcCChHHHHHHHHHHHHHHHHHHHcC---CChHHHHHHHHHhhHHHhhhhchhhhhhccCCchHH----HHHHH
Q 037955           53 GFDHLKSPNGFQRFVDDAIERSSELVNYISEM---PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREF----VEEAS  125 (733)
Q Consensus        53 ~~~~l~~p~~~~~~~~~~i~~~~~~i~~i~~~---~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~----r~aa~  125 (733)
                      .|..+   .++.|+++++++.+++.|++|.+.   ++++++|.+++++.+.|.++...+.++.++++++++    ++..+
T Consensus         5 ~f~~~---~~~~pa~~~~~~~~~~~i~~i~~~~~~~~~~~~i~~~e~~~~~l~~~~~~~~~~~s~dt~d~~~~~~~~~~~   81 (567)
T 3sks_A            5 SFKDY---EYKRPNIEELKEKFTVALEKFDNAKTVEEQKQVIHSINEIRNDFGTMGNLCYIRHSVDTTDAFYKEEQDFFD   81 (567)
T ss_dssp             SGGGC---CCCCCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             Ccccc---CCcCccHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence            45544   788999999999999999999765   478899999999999999999999999999999999    99999


Q ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-HHHh
Q 037955          126 KASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCR-EFNQ  204 (733)
Q Consensus       126 ~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~-~F~~  204 (733)
                      ++.++++++.+++      ++++..    .     .+++.|                  ++++.++..++.+++. .|++
T Consensus        82 ~~~p~l~~~~~~~------~~~l~~----~-----~~~~~l------------------~~~~~~i~~~l~~l~~~~fs~  128 (567)
T 3sks_A           82 EFSPVVQGYGTKY------YNALIH----S-----PFREEL------------------EAYYGKQLFALAECDLKTYSD  128 (567)
T ss_dssp             HHHHHHHHHHHHH------HHHHHT----C-----TTHHHH------------------HHHHCHHHHHHHHHHHHTCCG
T ss_pred             HhChHHHHHHHHH------HHHHHc----C-----hhHHHH------------------HHHHHHHHHHHHHhhHhhcCH
Confidence            9999999999866      332221    1     123333                  5789999999999999 9999


Q ss_pred             hcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHh
Q 037955          205 NIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQG  284 (733)
Q Consensus       205 ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~  284 (733)
                      |+.+...  ....+.|+|+++++.++.                   +.+|+.+|++  .+.++|+ ++||++||++|+|+
T Consensus       129 ~~~~~~~--~~~~l~~l~~~~~~~~~~-------------------~~~G~~~tl~--~~~~~l~-~~dr~~R~~a~~a~  184 (567)
T 3sks_A          129 EVVKDLQ--LENKLSSQYTQLLASAKI-------------------DFAGEERTLS--QLIPFMQ-GKERSERKAASEAY  184 (567)
T ss_dssp             GGHHHHH--HHHHHHHHHHHHHHTCCE-------------------EETTEEECHH--HHHHHHT-SSCHHHHHHHHHHH
T ss_pred             HHHHHHH--HHHHHHhCHHHHHHhccc-------------------ccCCEEEehh--hhhhhhc-CCCHHHHHHHHHHH
Confidence            9875442  123578889998877643                   2357889997  5999999 99999999999998


Q ss_pred             ccCCc----chHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCC---CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 037955          285 HSVPQ----ANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMAS---SPEVVKSFLLEMSKMIKPKADEEFEAIKNFKR  357 (733)
Q Consensus       285 ~~~~~----~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~---spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~  357 (733)
                      .....    .|.++|.+++++|.++|+++||+||+++++. +|++   +|+.|.+||+.|.+.+.|.+++    +.++++
T Consensus       185 ~~~~~~~~~~~~~~l~~lv~~r~~~A~llGy~s~~~~~l~-rm~~~~~~~e~v~~~l~~l~~~~~p~~~~----~~~~k~  259 (567)
T 3sks_A          185 YGFLAENEEELDRIYDELVKVRTKIAKSLGFKNFVELGYA-RMYRTDYNAEMVANYRQQVLDYIVPVTTE----LRKRQQ  259 (567)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH-HTTCCSCCHHHHHHHHHHHHHHTHHHHHH----HHHHHH
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH-HhhccCCCHHHHHHHHHHHHHHhHHHHHH----HHHHHH
Confidence            76543    3568999999999999999999999999999 9999   9999999999999999999988    556667


Q ss_pred             HhcCCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEE-
Q 037955          358 KSCGQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSL-  436 (733)
Q Consensus       358 ~~~g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v-  436 (733)
                      +.+|  .++++|||+.|+          ++...+++|||++.++++++.+++.+ +..              .++++++ 
T Consensus       260 ~~lg--~~~l~~wD~~~~----------l~~~~~~~~f~~~~~~~~~~~~~~~l-~~~--------------~~~~~~~~  312 (567)
T 3sks_A          260 ARIG--VEKLAYYDENFE----------FPTGNPTPKGDADWIVNHGKTMYKEL-SAE--------------TDEFFNFM  312 (567)
T ss_dssp             HHTT--CSSCCTTTTTCC----------STTCCCCCSSCHHHHHHHHHHHHHHH-CHH--------------HHHHHHHH
T ss_pred             HHcC--CCcCcHHHhhCc----------CCCCccCCcCCHHHHHHHHHHHHHhC-CHH--------------HHHHHHHH
Confidence            7777  568999999876          45566789999999999999887654 321              2333331 


Q ss_pred             EcCCCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHH
Q 037955          437 QHPEEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHS  516 (733)
Q Consensus       437 ~d~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~  516 (733)
                      .+       ..|+|+++|+||++||||+++++        .+.|  +|+|||+++.        +||.|||||||||+|+
T Consensus       313 ~~-------~g~iD~~~r~gKr~GA~~~~~~~--------~~~P--~i~~Nf~~t~--------~dV~TL~HE~GHalH~  367 (567)
T 3sks_A          313 LD-------NDLLDLVAKKGKAGGGYCTYIEN--------YKAP--FIFSNFNGTS--------GDIDVLTHEAGHAFQV  367 (567)
T ss_dssp             HH-------TTCEEEECCTTCCSSCEEEEEGG--------GTEE--EEEEEECSST--------HHHHHHHHHHHHHHHH
T ss_pred             HH-------CCccccCCCCCCCCCccccCCCC--------CCCC--eEEEcCCCCc--------chHHHHHHHccHHHHH
Confidence            22       23999999999999999988754        2458  4599999854        9999999999999999


Q ss_pred             hhhcCCCCccCCC-cccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 037955          517 LLSRTDYQHFSGT-RVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFYALV  595 (733)
Q Consensus       517 lls~~~~~~~sgt-~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~f  595 (733)
                      +++++.+  .+++ .+++|+||+|||+||+|+|++ +++.+.    +++  ++.++.++....   .  .+.+|+.++.|
T Consensus       368 ~ls~~~~--~~~~~~~~~d~aE~~S~~~E~~~~~~-ll~~~~----~~~--~~~~~~~l~~~~---~--~~~~q~~~~~F  433 (567)
T 3sks_A          368 YESRKFE--IPEYNWPTYEACEIHSMSMEFFTWPW-MKLFFE----EDA--DKYYFSHLSSAL---L--FLPYGVSVDEY  433 (567)
T ss_dssp             HHTTTCS--SGGGSSCCHHHHHHHHHHHHHHTGGG-HHHHHG----GGH--HHHHHHHHHHHH---H--HHHHHHHHHHH
T ss_pred             HHHccCc--cccccCCcchHhHHhHHhHHHHHHHH-HHHhcc----Cch--HHHHHHHHHHHH---H--HHHHHHHHHHH
Confidence            9999874  3443 468999999999999999999 455332    222  455665554332   1  36689999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHhhccCCCC-------CCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHcCC
Q 037955          596 DQTLFGERLGQTRDTSSIVADMKRQHTSWNH-------VEGTHWHIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQEDP  668 (733)
Q Consensus       596 D~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~-------~~~~~~~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~~~  668 (733)
                      |+.+|...+.+..+++++|.++.++|.+...       ..+..| ++|+||++|++|||+|+||+++|.++|..+++++ 
T Consensus       434 e~~v~~~~~lt~~~l~~~~~~l~~~y~p~~~~~~~~~~~~~~~W-~~~~Hfy~~~fY~y~Ya~g~~~A~~l~~~~~~~~-  511 (567)
T 3sks_A          434 QHYVYENPEASPEERKTAWRNIEKKYLPHRDYEDNDYLERGGFW-QRQGHIYSSPFYYIDYTLAQICALQFWKRARDNR-  511 (567)
T ss_dssp             HHHHHHSTTCCHHHHHHHHHHHHHHHSCC------------------------CGGGHHHHHHHHHHHHHHHHHHHHCH-
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHhCCccCCCcccccccCceE-EeeCcccCCCCccHHHHHHHHHHHHHHHHHHhCC-
Confidence            9999987677777789999999999853211       122345 7999999999999999999999999999998875 


Q ss_pred             CCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCC
Q 037955          669 LSLTTGTTLRTKILQHGGAKEPADMLNDLVGDG  701 (733)
Q Consensus       669 ~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd  701 (733)
                        +.++++|++ +|+.|||++|.|+++++ |.|
T Consensus       512 --~~~~~~Y~~-~L~~Ggs~~~~ellk~a-Gvd  540 (567)
T 3sks_A          512 --QEAWEDYVN-LCQQGGSKSFLELVEVA-NLT  540 (567)
T ss_dssp             --HHHHHHHHH-HHHTTTSSCHHHHHHHT-TCC
T ss_pred             --HHHHHHHHH-HHhCcCCCCHHHHHHHc-CCC
Confidence              568999985 99999999999999995 997


No 5  
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Probab=100.00  E-value=2.8e-67  Score=606.82  Aligned_cols=495  Identities=17%  Similarity=0.216  Sum_probs=388.0

Q ss_pred             HHHHHHHHHHHHHHcC---CChHHHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHHH----HHHHHHHHHHHHhhCC
Q 037955           69 DAIERSSELVNYISEM---PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEAS----KASMRISEYLHYLNTN  141 (733)
Q Consensus        69 ~~i~~~~~~i~~i~~~---~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~----~~~~~l~~~~~~l~~~  141 (733)
                      +..+.+++++++|...   +++.++|.+++++++.+|++.+.+.++.+++++++++++..    ++.+.+.++...+.  
T Consensus        15 ~~~~~~~~l~~~i~~~~~~~~~~~~l~~~e~~~~~l~~~~~~a~~~~~~dt~d~~~~~~~~~~~~~~~~l~~~~~~~~--   92 (564)
T 3ahn_A           15 KLKASFQQALQSFQKASNAEEQNEAMKEINQLRNDFSTMAQICYIRHTIDTNDEFYKQEQDFFDEVEPIVKGLVNDYY--   92 (564)
T ss_dssp             HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            3344444444444333   46789999999999999999999999999999999999888    77777777666544  


Q ss_pred             HHHHHH--HHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCC
Q 037955          142 HTLYDA--VKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPES  219 (733)
Q Consensus       142 ~~Ly~~--l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~~~~v~~~~l~  219 (733)
                      +.|++.  .+.+.   ..++.+..++       ++.....|+    +++.++..+++.+++.|.+|+.+.+  +.     
T Consensus        93 ~~l~~~~~~~~l~---~~~~~~~~~~-------~~~~~~~l~----~~~e~l~~~~~~l~~~f~~~~~~~~--~~-----  151 (564)
T 3ahn_A           93 RALVSSPFRSQLE---GKWGKQLFAL-------AEAELKTYS----PDIVEDLQLENKLTSEYTKLVASAK--IF-----  151 (564)
T ss_dssp             HHHHTCTTHHHHH---HHHCTHHHHH-------HHHHHTTCC----GGGHHHHHHHHHHHHHHHHHHHTCC--EE-----
T ss_pred             HHHHcCcchHHHH---HHHHHHHHHH-------HHhhhhcCC----HHHHHHHHHHHHHHHHHHHHHhcCe--ec-----
Confidence            344432  11110   0122223333       333334455    5677899999999999999977332  11     


Q ss_pred             CCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHhccCCc----chHHHH
Q 037955          220 RIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQGHSVPQ----ANHEVL  295 (733)
Q Consensus       220 glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~~~~~~----~n~~~l  295 (733)
                                                      .+|+  +++.+.+.++|++ +|+++||++|+|+.....    .|..+|
T Consensus       152 --------------------------------~~G~--~l~~~~~~~~l~~-~dr~~R~~a~~a~~~~~~~~~~~~~~~l  196 (564)
T 3ahn_A          152 --------------------------------FEGE--ERTLAQLQPFVES-PDRDMRKRASEARFTFFQEHEEKFDEIY  196 (564)
T ss_dssp             --------------------------------ETTE--EECTGGGHHHHTC-SSHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             --------------------------------cCCe--eccHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence                                            1244  6677899999996 999999999999876543    477899


Q ss_pred             HHHHHHHHHHHHHcCCCCHHHHHhccCcCCC---HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCCCCCCcCCH
Q 037955          296 HELIAARNELAQIMGYRSYAEFIVMPNMASS---PEVVKSFLLEMSKMIKPKADEEFEAIKNFKRKSCGQKYVHLEPWDE  372 (733)
Q Consensus       296 ~~ll~lR~e~A~llGy~sya~~~l~~~ma~s---pe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~g~~~~~l~pWD~  372 (733)
                      .+++++|+++|+++||+||+++++. +|+++   |++|.+||+.|.+.++|.+++    +.+++++.+|  .++++|||+
T Consensus       197 ~~~v~~r~~~A~l~Gy~s~~~~~l~-~m~~~~~~~e~v~~~l~~l~~~~~p~~~~----~~~~k~~~~g--~~~l~~wD~  269 (564)
T 3ahn_A          197 DQLVKVRTAIAQKLGFKNFVELGYA-RLGRTDYNAEMVAKFRKQVEKHIVPIAVK----LRERQRERIG--VEKLKYYDE  269 (564)
T ss_dssp             HHHHHHHHHHHHHTTCSSHHHHHHH-HTTCCSCCHHHHHHHHHHHHHHTHHHHHH----HHHHHHHHHT--CSSCCTTTT
T ss_pred             HHHHHHHHHHHHHcCCCCHHHHHHH-hhhccCCCHHHHHHHHHHHHHHhHHHHHH----HHHHHHHHcC--CCccCHHhc
Confidence            9999999999999999999999997 89987   799999999999999999987    6777777777  467999998


Q ss_pred             HHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccc-cceeEEEcCCCCcccceeeec
Q 037955          373 AYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPD-VLKLSLQHPEEGEMGYLYLDL  451 (733)
Q Consensus       373 ~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~d-V~~~~v~d~~~~~lg~~ylDl  451 (733)
                      .          ++++...+++|||.+.|+++++.++..+                +|+ |+++.+.+++      .|+|+
T Consensus       270 ~----------~~~~~~~~~~y~~~~~v~~~~~~~~~~l----------------~~~~~~~~~~~~~~------~~iD~  317 (564)
T 3ahn_A          270 A----------FVFPTGNPMPKGDANWIIENGKKMYEEL----------------SPETGEFFRYMIEH------ELMDL  317 (564)
T ss_dssp             T----------CCCTTCCCCCSSCHHHHHHHHHHHHHHH----------------CHHHHHHHHHHHHT------TCEEE
T ss_pred             C----------CcCCCCCCCCcCCHHHHHHHHHHHHHhc----------------CHHHHHHHHHHhhC------Cceec
Confidence            6          4566667899999999999988877655                344 6666664322      29999


Q ss_pred             ccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhcCCCCccCCCcc
Q 037955          452 YSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSRTDYQHFSGTRV  531 (733)
Q Consensus       452 ~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~~~~~~~sgt~~  531 (733)
                      ++|+||++||||++++++        +.|+|  +|||+++.        +||.|||||||||+|+++++ +++ ++|+++
T Consensus       318 ~~r~gK~~Ga~~~~~~~~--------~~P~i--~~Nf~~t~--------~dv~TL~HE~GHa~H~~ls~-~~~-~~~~~~  377 (564)
T 3ahn_A          318 VAKKGKASGGYCTYIENY--------KAPFI--FSNFTGTS--------GDIDVLTHEAGHAFQVYESR-HYE-IPEYNW  377 (564)
T ss_dssp             ECCTTCCSSCEEEEEGGG--------TEEEE--EEEECSST--------HHHHHHHHHHHHHHHHHHTT-TCS-SGGGSS
T ss_pred             CCCCCCCCCCcccCCCCC--------CCCEE--EEeCCCCc--------cchhhHHHHhCHHHHHHHhc-CCC-CcccCc
Confidence            999999999999887653        35854  79999854        99999999999999999999 777 999999


Q ss_pred             -cchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHhhc---CCCCCC
Q 037955          532 -ALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFYALVDQTLFG---ERLGQT  607 (733)
Q Consensus       532 -~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~fD~~lh~---~~~~~~  607 (733)
                       ++||||+|||+||+|+| +.+++.++.|    +    +   ++ ...++..++.++.|+  +++|+..|.   ..+.+.
T Consensus       378 ~~~d~aE~pS~~~E~~~~-~~ll~~~~~~----~----~---~~-~~~~~~~~~~~~~~~--~~~d~f~h~~~~~~~~t~  442 (564)
T 3ahn_A          378 PTLEACEIHSMSMEFFTW-PWMKLFFKED----A----E---KY-QFYHLSDALLFLPYG--VAVDEFQHFVYENPNATP  442 (564)
T ss_dssp             CCHHHHHHHHHHHHHHTG-GGHHHHHGGG----H----H---HH-HHHHHHHHHHHHHHH--HHHHHHHHHHHHCTTCCH
T ss_pred             CchHHHHHHHHHHHHHHH-HHHHHhcCCh----H----H---HH-HHHHHHHHHHHHHHH--HHHHHHHHHHhcCCCCCH
Confidence             99999999999999999 7788776655    1    1   22 245566777777777  788887776   234455


Q ss_pred             CCHHHHHHHHHhhccCC-CCC------CCCcccccccccccccccchhHHHHHHHHHHHHHHHHHcCCCCHHHH-HHHHH
Q 037955          608 RDTSSIVADMKRQHTSW-NHV------EGTHWHIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQEDPLSLTTG-TTLRT  679 (733)
Q Consensus       608 ~~~~~l~~~l~~~~~~~-~~~------~~~~~~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~~~~~~~~G-~~~r~  679 (733)
                      .+++++|.+++++|.+. +..      .+..| ++|+|||+++++||+|+||+++|+++|+.|.+    ++++| ++|+ 
T Consensus       443 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~W-~~~~Hi~~~~~Yyy~Y~~~~v~a~~~~~~~~~----~~~~~~~~y~-  516 (564)
T 3ahn_A          443 AERKQAWRAIERKYMPTKDYDGNDYLERGGFW-QRQSHIYTTAFYYIDYTLAQICAFQFWKRSRE----NYKEAWNDYL-  516 (564)
T ss_dssp             HHHHHHHHHHHHHHSTTCCCTTCHHHHTTCGG-GGCHHHHHSTTTTHHHHHHHHHHHHHHHHHHH----CHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHhcchhhhcCCccccCCcce-eccccccCCCCcchhhHHHHHHHHHHHHHHHH----cchhHHHHHH-
Confidence            68899999999999764 221      23456 79999998777889999999999999999876    57889 9998 


Q ss_pred             HHhcCCCCCCHHHHHHHhcCCCc
Q 037955          680 KILQHGGAKEPADMLNDLVGDGI  702 (733)
Q Consensus       680 ~vL~~Ggs~~~~ell~~flGrd~  702 (733)
                      +||+.|||++|.+++++| |+|+
T Consensus       517 ~~L~~Ggs~~~~el~~~~-G~d~  538 (564)
T 3ahn_A          517 TLCRQGGSKPFTELVRVA-NLIS  538 (564)
T ss_dssp             HHHTTTTSSCHHHHHHHT-TCCC
T ss_pred             HHHhCcCCCCHHHHHHHh-CCCC
Confidence            699999999999999999 9973


No 6  
>3ce2_A Putative peptidase; structural genomics, unknown function, P protein structure initiative; 2.60A {Chlamydophila abortus}
Probab=100.00  E-value=1.3e-67  Score=614.11  Aligned_cols=530  Identities=15%  Similarity=0.144  Sum_probs=425.3

Q ss_pred             HHHHHHHHHHHH------HHHHHHHc---C----CChHHHHHHHHHhhHHHhhhhchhhhhhccCCc-hHHHHHHHHHHH
Q 037955           64 QRFVDDAIERSS------ELVNYISE---M----PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPD-REFVEEASKASM  129 (733)
Q Consensus        64 ~~~~~~~i~~~~------~~i~~i~~---~----~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d-~e~r~aa~~~~~  129 (733)
                      .+++++.+++++      +.+++|..   .    +++.++|.+++++...+.++...+.++.+++++ +++++...++.+
T Consensus        33 ~~a~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~l~~~e~~~~~l~~~~~~~~~~~s~dt~d~~~~~~~~~~~~  112 (618)
T 3ce2_A           33 RKAWKADLDSFGLKTDGSPTWPALQATQYQLDNSESLLSLLTTLFSIERKLNKLYVYAHLTHDQDITNQEGIADLKSITH  112 (618)
T ss_dssp             HHHHHHHHHHTCCC---CCSCSTTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhHhcccCCCHHHHHHHHHHHH
Confidence            567888888888      77777754   1    357899999999999999999999999999996 479999999999


Q ss_pred             HHHHHHHHhh-CCHHHHH----HHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 037955          130 RISEYLHYLN-TNHTLYD----AVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQ  204 (733)
Q Consensus       130 ~l~~~~~~l~-~~~~Ly~----~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~  204 (733)
                      +++++...+. .++.|+.    .+.....+ +.|+ +.+++++..++   +.|..|+++.++.+.+++...+.+...|..
T Consensus       113 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-~~L~-~~~~~l~~~~~---~~~~~Ls~~~e~~l~~~~~~~~~~~~~~~~  187 (618)
T 3ce2_A          113 LHTLFAEETSWVQPALTSLSESLIAQHLSA-PCLA-PYRFYLEKIFR---LSIHTGTPGEEKILASAFTPLEVASKAFSS  187 (618)
T ss_dssp             HHHHHHHHTTTHHHHHHTSCHHHHHHHHHC-STTG-GGHHHHHHHHT---TGGGCCCHHHHHHHHHHTTGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHcC-chHH-HHHHHHHHHHH---hCccCCCHHHHHHHHHhchhhhhHHHHHHH
Confidence            9999999988 6888884    22222222 4577 78888888855   889999999999999999999999999977


Q ss_pred             hcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHh
Q 037955          205 NIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQG  284 (733)
Q Consensus       205 ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~  284 (733)
                      ... ..  +.+      |                         .....+|+.++++.+.+.++|+ ++||++||++|.|+
T Consensus       188 ~~~-~~--~~~------~-------------------------~~~~~~G~~~~l~~~~~~~~l~-~~dr~~Rk~a~~a~  232 (618)
T 3ce2_A          188 LSD-SE--IPF------G-------------------------QATDSEGNSHPLSHALASLYMQ-STDRELRKTSYLAQ  232 (618)
T ss_dssp             HHH-TT--SCC------C-------------------------EEECSSCCEEECCHHHHHHHHT-CSCHHHHHHHHHHH
T ss_pred             Hhh-cC--ccc------c-------------------------eeecCCCcEEecCHHHHHHHHh-CcCHHHHHHHHHHH
Confidence            433 21  111      0                         0001146789999999999998 99999999999998


Q ss_pred             ccCC----cchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Q 037955          285 HSVP----QANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRKSC  360 (733)
Q Consensus       285 ~~~~----~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~  360 (733)
                      ....    ..|.++|.+++++|++.|+++||+||+++++..+++ +++.|..|++.|.+.+ |.+++    +.+++++.+
T Consensus       233 ~~~~~~~~~~~~~~l~~lv~lr~~~A~llGy~s~~~~~l~~~~~-~~~~v~~l~~~v~~~~-p~~~~----~~~~k~~~~  306 (618)
T 3ce2_A          233 CERYHSYRHTFANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNI-PTTVYTNLIDIVKKNS-SLITK----YFSIKQRCL  306 (618)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTTTC-CHHHHHHHHHHHHTTH-HHHHH----HHHHHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcCC-CHHHHHHHHHHHHHhh-HHHHH----HHHHHHHhc
Confidence            7643    356789999999999999999999999999999876 8999999999999886 87763    566666666


Q ss_pred             CCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEcCC
Q 037955          361 GQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQHPE  440 (733)
Q Consensus       361 g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d~~  440 (733)
                      |  .++++|||+  |+++.+         .+++|||++.++++++..+..+            ++.||++|+.+      
T Consensus       307 g--~~~l~~~D~--~~~~~~---------~~~~~f~~~~~~~~v~~~~~~l------------~~~~~~~v~~~------  355 (618)
T 3ce2_A          307 N--LKDFHFYDV--YAPLSQ---------SKEKKYTFQEAVDLIYTSLSPL------------GTEYIDTLKQG------  355 (618)
T ss_dssp             T--CSSCBGGGT--TCCSCC-----------CCCCCHHHHHHHHHHHTGGG------------HHHHHHHHHHH------
T ss_pred             C--CCCCCHHHc--CCCccc---------CCCCcccHHHHHHHHHHHHHhh------------CHHHHHHHHHH------
Confidence            7  467999999  333322         4678999999999998876555            36899999875      


Q ss_pred             CCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhc
Q 037955          441 EGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       441 ~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~  520 (733)
                        ++|.+|+|+++|+||++||||.+. .        .+.|  +|+|||+++        +++|.|||||||||+|+++++
T Consensus       356 --~~~~~~iD~~~R~gKr~Ga~~~~~-~--------~~~p--~i~~N~~~t--------~~dv~TL~HE~GHalH~~ls~  414 (618)
T 3ce2_A          356 --LTTQGWVDKYENLNKRSGAYSSGC-Y--------DSHP--YVLLNYTGT--------LYDVSVIAHEGGHSMHSYFSR  414 (618)
T ss_dssp             --HHTSCCEECSCCTTCCCSCEEECC-T--------TSCC--EEECCCCSS--------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HccCCeEecCCCCCCCCCCccCCC-C--------CCCc--eEEEecCCc--------hhHHHHHHHHhchHHHHHHhc
Confidence              349999999999999999999761 1        2457  459999985        499999999999999999998


Q ss_pred             CCCCccCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHhh
Q 037955          521 TDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFYALVDQTLF  600 (733)
Q Consensus       521 ~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~fD~~lh  600 (733)
                      ..++ +.|+++++||||+|||+||+|+|++. +    +|+.+++ .|..+++++..+   +.+ .+++|+.++.||+.+|
T Consensus       415 ~~~p-~~~~~~~~~~~E~~S~~~E~~~~~~l-l----~~~~~~~-~~~~ll~~~l~~---f~~-~~~~q~~~~~fe~~~h  483 (618)
T 3ce2_A          415 KHQP-FHDAQYPIFLAEIASTLNEMLLMDSM-L----KESDSKE-EKITILTRCLDT---IFS-TLFRQVLFASFEYDIH  483 (618)
T ss_dssp             HHSC-GGGCSCCGGGTTHHHHHHHHHHHHHH-H----HHCCCHH-HHHHHHHHHHHH---HHH-HTHHHHHHHHHHHHHH
T ss_pred             ccCc-ccccCCcHHHHHHHHHHHHHHHHHHH-H----HhcCChH-HHHHHHHHHHHH---HHH-HHHHHHHHHHHHHHHH
Confidence            6544 44899999999999999999999853 4    3565433 477788887764   333 6899999999999999


Q ss_pred             cCC----CCCCCCHHHHHHHHHhhccCCCCC---CCCcccccccccccccccchhHHHH--HHHHHHHHHHHHHcCCCCH
Q 037955          601 GER----LGQTRDTSSIVADMKRQHTSWNHV---EGTHWHIRFSHFINYGAGYYSYLYA--KCFAATIWQKLCQEDPLSL  671 (733)
Q Consensus       601 ~~~----~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~f~Hl~~Y~a~YYsYl~s--~v~A~di~~~~~~~~~~~~  671 (733)
                      ...    +.+..++.++|.+++++|.+.+..   ...++|++|+|+| +  +||+|.|+  .++|+++|+.+.+++   +
T Consensus       484 ~~~~~g~~lt~~~~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~H~~-~--~fY~Y~Ya~g~v~a~~~~~~~~~~~---~  557 (618)
T 3ce2_A          484 HAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFY-Y--NFYVYQYATGIIAALCFLEKILNNE---D  557 (618)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHTTTCBCCTTGGGGGGGSCGGG-C--SSCTHHHHHHHHHHHHHHHHHHTTC---T
T ss_pred             hhhhcCCCCCHHHHHHHHHHHHHHHcCCCcCCCCCCCceeeecCcee-c--CCccHHHHHHHHHHHHHHHHHHHcC---H
Confidence            832    445568999999999999775432   2334447999998 4  46666666  899999999998765   5


Q ss_pred             HHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHH
Q 037955          672 TTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDE  720 (733)
Q Consensus       672 ~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~  720 (733)
                      ++|++|+ .||+.|||++|.+++++| |+|          |+.++|++.
T Consensus       558 ~~~~~y~-~iL~~Ggs~~~~el~k~~-G~d----------~~~~~~l~~  594 (618)
T 3ce2_A          558 NALNSYL-NFLKSGGSDFPLEILKKS-GLD----------MGTVEPIQK  594 (618)
T ss_dssp             THHHHHH-HHHTTTTSSCHHHHHHHT-TCC----------TTSSHHHHH
T ss_pred             HHHHHHH-HHHhCcCCCCHHHHHHHh-CCC----------CCchHHHHH
Confidence            6899999 999999999999999999 995          777777753


No 7  
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein ST initiative; 2.50A {Enterococcus faecium}
Probab=100.00  E-value=1.4e-64  Score=586.11  Aligned_cols=534  Identities=14%  Similarity=0.119  Sum_probs=362.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHc---C-----CChHHHHHHHHHhhHHHhhhhchhhhhhccCCc-hHHHHHHHHHHHHHHHH
Q 037955           64 QRFVDDAIERSSELVNYISE---M-----PSSVEIIRAMDEISDAVCSVVDSAELCRQTHPD-REFVEEASKASMRISEY  134 (733)
Q Consensus        64 ~~~~~~~i~~~~~~i~~i~~---~-----~~~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d-~e~r~aa~~~~~~l~~~  134 (733)
                      .+++++.++++++.|++|..   .     +++.++|.+++++...+.++...+.++.+++++ ++++++.+++.++++++
T Consensus         5 ~~a~~~~l~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~e~~~~~l~~~~~~~~~~~s~dt~d~~~~~~~~~~~~~~~~~   84 (587)
T 2qr4_A            5 DQEFDEKYLELSEELKQSEKHKGTLDQGASQFLNAIEFVLRVYRQTEVIYVYAHLKNDQDTGNTDYQALYARASSLFSKV   84 (587)
T ss_dssp             HHHHHHHHHHHHHHGGGHHHHTTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            46778888888888888865   2     367899999999999999999999999999995 55999999999999999


Q ss_pred             HHHhh-CCHHHHH----HHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 037955          135 LHYLN-TNHTLYD----AVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIIND  209 (733)
Q Consensus       135 ~~~l~-~~~~Ly~----~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~  209 (733)
                      ...+. .++.|+.    .++......+.| .+.+++++.+++   +.|..|+++.++.+.+++...+.+...|..... .
T Consensus        85 ~~~~~~~~~~l~~l~~~~~~~~l~~~~~l-~~~~~~l~~~~~---~~~~~Ls~~~e~~l~~~~~~~~~~~~~~~~~~~-~  159 (587)
T 2qr4_A           85 SEAVSWFEPEILQLSDDQIWQYFKEEPKL-EVYRHYIQQIVD---NRAHVLSAEQESLLAGAGEIFDASSDTFAVLNN-A  159 (587)
T ss_dssp             HHHTTTHHHHHTTSCHHHHHHHHHHCGGG-GGGHHHHHHHHT---TGGGCCCHHHHHHHHHTHHHHHHHHHHHHHHHH-T
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHhcChhH-HHHHHHHHHHHH---hcccCCCHHHHHHHHHhchhhhhHHHHHHHhhc-c
Confidence            99887 5666642    111110000111 145667777644   789999999999999999999999999985433 2


Q ss_pred             CCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHhccCC-
Q 037955          210 PGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQGHSVP-  288 (733)
Q Consensus       210 ~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~~~~~-  288 (733)
                      .  +.+      |                         .....+|+.++++.+.+.++|+ ++||++||++|+|+.... 
T Consensus       160 ~--~~~------~-------------------------~~~~~~G~~~~l~~~~~~~~l~-~~dr~~R~~a~~a~~~~~~  205 (587)
T 2qr4_A          160 D--LVF------P-------------------------TIEGENGEIVQLSHGVYGQLLE-STDRRVREAAFKGLYSVYE  205 (587)
T ss_dssp             T--CCC------C-------------------------EEECTTSCEEECCHHHHHHHHT-CSCHHHHHHHHHHHHHHHH
T ss_pred             c--ccc------c-------------------------eeecCCCeEEecCHHHHHHHHh-CcCHHHHHHHHHHHHHHHH
Confidence            1  111      0                         0001146789999999999998 999999999999987643 


Q ss_pred             ---cchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCCC
Q 037955          289 ---QANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRKSCGQKYV  365 (733)
Q Consensus       289 ---~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~g~~~~  365 (733)
                         ..|.++|.+++++|++.|+++||+||+++++..+|+ +++.|..|++.|.+.+ |.+++    +.+++++.+|  .+
T Consensus       206 ~~~~~~~~~l~~lv~lr~~~A~llGy~s~~~~~l~~~~~-~~~~v~~l~~~l~~~~-p~~~~----~~~~~~~~~g--~~  277 (587)
T 2qr4_A          206 QFRNTFASTLGTHIKGHNFKAKVRNYSSAREASLSNNHI-PESVYDTLVDVVNKHL-PLLHR----YMELRKRLLE--VE  277 (587)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHTTTC-CHHHHHHHHHHHHHTH-HHHHH----HHHHHHHHHT--CS
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCC-CHHHHHHHHHHHHHhh-HHHHH----HHHHHHHHcC--CC
Confidence               257789999999999999999999999999999887 8999999999999987 88873    4445555567  46


Q ss_pred             CCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEcCCCCccc
Q 037955          366 HLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQHPEEGEMG  445 (733)
Q Consensus       366 ~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d~~~~~lg  445 (733)
                      ++++||+.|+...           .....|+++++.+.+.    +.|.            +..++...+     -+.+++
T Consensus       278 ~l~~~D~~~~~~~-----------~~~~~~~~~~~~~~~~----~~~~------------~~~~~~~~~-----~~~~~~  325 (587)
T 2qr4_A          278 KLHMYDLYTPVLG-----------EAPITFTYEEAKEKAL----EALK------------PMGEEYMAI-----VEKAFS  325 (587)
T ss_dssp             SBCGGGSSSCSSC-----------CCCC-----CCHHHHH----HHTG------------GGHHHHHHC-----------
T ss_pred             CCCHHHccCCccc-----------CCCCcccHHHHHHHHH----HHHH------------hhCHHHHHH-----HHHHHH
Confidence            7999999764221           1234677777665443    2332            111111111     012356


Q ss_pred             ceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhcCCCCc
Q 037955          446 YLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSRTDYQH  525 (733)
Q Consensus       446 ~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~~~~~~  525 (733)
                      ..|+|+++|+||++||||.. ..        .+.|+  |+|||+++        +++|.|||||||||+|++++++..+.
T Consensus       326 ~~~iD~~~r~gKr~Ga~~~~-~~--------~~~p~--i~~Nf~~t--------~~dv~TL~HE~GHalH~~ls~~~~~~  386 (587)
T 2qr4_A          326 ERWIDVVENKGKRSGAYSSG-SY--------DTNPY--ILLNWHDT--------LDQLFTLVHEMGHSVHSYFTRSNQPY  386 (587)
T ss_dssp             ---------------------------------------------C--------HHHHHHHHHHHHHHHHHHHC------
T ss_pred             CCCEeCcCCCCCCCCCCCCC-CC--------CCCCe--EEEecCCC--------cchHHHHHHHhchHHHHHHhcCcCCc
Confidence            67999999999999999976 32        13574  58999975        59999999999999999999864333


Q ss_pred             cCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHhhcCC--
Q 037955          526 FSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFYALVDQTLFGER--  603 (733)
Q Consensus       526 ~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~fD~~lh~~~--  603 (733)
                      + ++++++||||+||||||+|+|+ .+++    |+.+++ +|..+++++..  .++  ..+++|+.++.||+.+|...  
T Consensus       387 ~-~~~~~~d~~E~~S~~~E~~~~~-~ll~----~~~~~~-~~~~ll~~~l~--~~~--~~~~~q~~~~~fe~~~h~~~~~  455 (587)
T 2qr4_A          387 V-YGDYSIFLAEIASTTNENILTE-YLLE----TEKDPR-VRAYVLNHYLD--GFK--GTVFRQTQFAEFEHFMHTEDEK  455 (587)
T ss_dssp             -------CHHHHHHHHHHHHHHHH-HHHH----HCCCHH-HHHHHHHHHHH--HHH--HHTHHHHHHHHHHHHHHHHHHT
T ss_pred             c-ccCCchHHHHHHHHHHHHHHHH-HHHH----hCCCHH-HHHHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHhHhc
Confidence            3 4589999999999999999994 4443    566666 67777766555  222  34789999999999999632  


Q ss_pred             --CCCCCCHHHHHHHHHhhccCCCCC---CCCcccccccccccccccchhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 037955          604 --LGQTRDTSSIVADMKRQHTSWNHV---EGTHWHIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQEDPLSLTTGTTLR  678 (733)
Q Consensus       604 --~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~~~~~~~~G~~~r  678 (733)
                        +.+..++.++|++++++|.+++..   ...++|++|+|+| +|.|||.|.+|+++|+++|+.|.+++   +++|++|+
T Consensus       456 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~H~~-~gfY~Y~Ya~g~v~a~~~~~~~~~~~---~~~~~~y~  531 (587)
T 2qr4_A          456 GVPLTSEYLSDSYGKLNAKYYGPAVEEDPEIKFEWSRIPHFY-YNYYVFQYSTGFSAASALAKKILNQE---PEALENYL  531 (587)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHCTTBCCCGGGGGGGGGCGGGG-SSSCTHHHHHHHHHHHHHHHHHHTTC---TTHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCcCCCCCcCceeeecCcee-cCCCcHHHHHHHHHHHHHHHHHHHCC---hhHHHHHH
Confidence              455568999999999999775432   2334446999998 44344444446999999999998765   56899998


Q ss_pred             HHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcCC
Q 037955          679 TKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVKL  723 (733)
Q Consensus       679 ~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g~  723 (733)
                       .||+.|||++|.+++++| |+|          |+.+++++. |+
T Consensus       532 -~iL~~Ggs~~~~el~~~~-G~d----------~~~~~~l~~-~l  563 (587)
T 2qr4_A          532 -AYLKAGNSDYPVEVMKKA-GVD----------MTQAAYIED-AM  563 (587)
T ss_dssp             -HHHHHCSCSCHHHHHHHT-TCC----------TTSSHHHHH-HH
T ss_pred             -HHHhCcCCCCHHHHHHHh-CCC----------CCChHHHHH-HH
Confidence             599999999999999999 995          777777754 44


No 8  
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A
Probab=100.00  E-value=6.8e-37  Score=355.41  Aligned_cols=508  Identities=14%  Similarity=0.158  Sum_probs=347.3

Q ss_pred             hHHHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHH
Q 037955           87 SVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAA  166 (733)
Q Consensus        87 ~~~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l  166 (733)
                      ..+.+..+++....++.....+.+-..++++++.+++..++.+.++.+..++..+...|+ ++      ...+++.++++
T Consensus        25 a~~~l~~~~~~~~~l~~~~~~~~w~~~t~~~~~~~~~~~e~~~~l~~~~~~~~~~~~~f~-~~------~l~~~~~~~~l   97 (615)
T 1r42_A           25 AKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENVQNMNNAGDKWSAFLKEQSTLAQMYP-LQ------EIQNLTVKLQL   97 (615)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTTTTSC-ST------TCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHhcccc-hh------hcCCHHHHHHH
Confidence            457778888888899988888888888888888888888889999999887766544442 11      11355556666


Q ss_pred             HHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhh
Q 037955          167 NHLRIDFEKGGIH-LCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLI  245 (733)
Q Consensus       167 ~~~~~~f~~~G~~-L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~  245 (733)
                      +    .++..|.. |+++.++++.++..++..+   |.++....            |        .              
T Consensus        98 ~----~l~~~g~~~l~~~~~~~~~~l~~~~~~~---~~~~~i~~------------~--------~--------------  136 (615)
T 1r42_A           98 Q----ALQQNGSSVLSEDKSKRLNTILNTMSTI---YSTGKVCN------------P--------D--------------  136 (615)
T ss_dssp             H----HHTCCGGGGSCHHHHHHHHHHHHHHHHH---HHHCEEEE------------T--------T--------------
T ss_pred             H----HHHHhccccCCHHHHHHHHHHHHHHHHH---HhcCeecc------------C--------C--------------
Confidence            5    56778866 8888888888877766665   66543200            0        0              


Q ss_pred             hhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHhccCC-cchHHHHHHHHHHHHHHHHHcCCCCHHHHHhcc-Cc
Q 037955          246 SWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQGHSVP-QANHEVLHELIAARNELAQIMGYRSYAEFIVMP-NM  323 (733)
Q Consensus       246 ~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~~~~~-~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~-~m  323 (733)
                        ++    +..+++ .+.+.++|.+++|+++|+.+|+++.... ..+.+.+.+++++|+++|+++||++|.++.+.. .+
T Consensus       137 --~~----~~~l~~-~p~l~~~~~~s~d~~~R~~aW~~~r~~~~~~~~~~l~~~v~l~~e~A~~~G~~~~~d~~~~~ye~  209 (615)
T 1r42_A          137 --NP----QECLLL-EPGLNEIMANSLDYNERLWAWESWRSEVGKQLRPLYEEYVVLKNEMARANHYEDYGDYWRGDYEV  209 (615)
T ss_dssp             --EE----EEEEET-TTBHHHHHHHCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTTCB
T ss_pred             --Cc----cccccc-chhHHHHHHhCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhcc
Confidence              11    122433 3688899888999999999999976544 458899999999999999999999999999877 45


Q ss_pred             CC------CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHhcCCCCCCCC-----c-----------C-CHHHHHHH-
Q 037955          324 AS------SPEVVKSFLLEMSKMIKPKADEEFEAIKNFK-RKSCGQKYVHLE-----P-----------W-DEAYYTAM-  378 (733)
Q Consensus       324 a~------spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~-~~~~g~~~~~l~-----p-----------W-D~~y~~~~-  378 (733)
                      ..      +++++.++++.|.+.++|...+ +....+.+ ++.+| .  .+.     |           | |+ |-... 
T Consensus       210 ~~~~r~dy~~~~~~~~ld~l~~~l~p~~~~-L~~yvr~kl~~~yg-~--~i~~~~~~p~~llg~m~~~~w~~~-~~l~~~  284 (615)
T 1r42_A          210 NGVDGYDYSRGQLIEDVEHTFEEIKPLYEH-LHAYVRAKLMNAYP-S--YISPIGCLPAHLLGDMWGRFWTNL-YSLTVP  284 (615)
T ss_dssp             CSCTTTCBCSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHST-T--TSCTTBCEEGGGSSSSSCSCCGGG-HHHHCT
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC-c--ccccCCCccHHHhhhhhhccchhh-hccccC
Confidence            44      7899999999999999998643 32222211 11223 1  222     4           3 11 11110 


Q ss_pred             h-hhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEcCCCCccccee-------ee
Q 037955          379 M-KSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQHPEEGEMGYLY-------LD  450 (733)
Q Consensus       379 ~-~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d~~~~~lg~~y-------lD  450 (733)
                      . ....++|...-+..-|+    -..|+.++.++|.                             .+|..+       .|
T Consensus       285 ~~~~~~~dv~~~~~~~~~~----~~~m~~~~~~~f~-----------------------------~lg~~~~~~~~w~~d  331 (615)
T 1r42_A          285 FGQKPNIDVTDAMVDQAWD----AQRIFKEAEKFFV-----------------------------SVGLPNMTQGFWENS  331 (615)
T ss_dssp             TTTSCCCCCTTTTGGGTCC----HHHHHHHHHHHHH-----------------------------TTTCCCCCTTHHHHC
T ss_pred             CCCCCccchhHHHHHhcCc----HHHHHHHHHHHHH-----------------------------HcCccccchhHhhhc
Confidence            0 01111222222223333    2445566666553                             123222       37


Q ss_pred             cccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhh-cCCCCccCCC
Q 037955          451 LYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLS-RTDYQHFSGT  529 (733)
Q Consensus       451 l~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls-~~~~~~~sgt  529 (733)
                      +++||||..|++|.++..+...     ..|.  |++|+...        ++||.|++||+|||+|.+.. .+.+...+|+
T Consensus       332 l~~rpgk~r~~~ch~~~~~~~~-----~d~r--I~~~t~~~--------~~d~~t~~HE~GHa~y~~~~~~~p~~~~~g~  396 (615)
T 1r42_A          332 MLTDPGNVQKAVCHPTAWDLGK-----GDFR--ILMCTKVT--------MDDFLTAHHEMGHIQYDMAYAAQPFLLRNGA  396 (615)
T ss_dssp             BCSCCCTTCCCCCSCEEEEEET-----TEEE--EECCCCSS--------HHHHHHHHHHHHHHHHHHHTTTSCGGGCSCS
T ss_pred             cccCCCCCCCCeeccchhhcCC-----CCce--EEecCCCC--------HHHHHHHHHHHHHHHHHHHHcCCChHhhcCC
Confidence            8899999657777665322211     1344  46676543        48999999999999998776 3333222444


Q ss_pred             cccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCC-ChHHHHHHHHHhhhhhhHHHHHHHHHHHH-hHHHhhc---CCC
Q 037955          530 RVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEI-VPEKLVKSMQGARDMFAATELQRQIFYAL-VDQTLFG---ERL  604 (733)
Q Consensus       530 ~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~-lp~~l~~~l~~~~~~~~~~~~~~ql~~a~-fD~~lh~---~~~  604 (733)
                      +  .+|+|.+|.+++++++.|+.|..+..+ .+..+ +++..++.+.     ..++..+.++-+.. ||+..|.   + .
T Consensus       397 ~--~~fhEa~s~~~~~s~~~~e~L~~~~ll-~~~~~~~~~~~i~~l~-----~~~l~~v~~lp~~~~~D~~r~~v~~g-~  467 (615)
T 1r42_A          397 N--EGFHEAVGEIMSLSAATPKHLKSIGLL-SPDFQEDNETEINFLL-----KQALTIVGTLPFTYMLEKWRWMVFKG-E  467 (615)
T ss_dssp             S--TTHHHHHHHHHHHHHHSHHHHHHTTSS-CTTSCCCHHHHHHHHH-----HHHHHHTTHHHHHHHHHHHHHHHHHT-C
T ss_pred             C--ChHHHHHHHHHHHHhCCHHHHHHcccc-ccccCCChHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence            3  479999999999999999999887665 33343 5666666541     22333444444444 4776443   5 4


Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCC---CCcc-cccccccccccccchhHHHHHHHHHHHHHHHHHc----CC-----C--
Q 037955          605 GQTRDTSSIVADMKRQHTSWNHVE---GTHW-HIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQE----DP-----L--  669 (733)
Q Consensus       605 ~~~~~~~~l~~~l~~~~~~~~~~~---~~~~-~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~----~~-----~--  669 (733)
                      .+..+++++|++++++|.|+.++.   ...| +.++.|+++- ++||+|.||.++|+++|+.+.++    ++     +  
T Consensus       468 ~~~~d~~~~W~el~~~y~Gi~pp~~~~~~~~d~~~~~Hi~~~-~yy~~Y~l~~v~a~Q~~~~~~~~~~~~~~l~~~d~~~  546 (615)
T 1r42_A          468 IPKDQWMKKWWEMKREIVGVVEPVPHDETYCDPASLFHVSND-YSFIRYYTRTLYQFQFQEALCQAAKHEGPLHKCDISN  546 (615)
T ss_dssp             SCGGGHHHHHHHHHHHHTCEECSSCCCTTCCGGGGSHHHHTT-CCCTHHHHHHHHHHHHHHHHHHTTTCCSCGGGCCCTT
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCCCCccccChhhhhhccCC-ccHHHHHHHHHHHHHHHHHHHHhccccCCcccccccC
Confidence            455789999999999999875433   2344 4578998843 68999999999999999999754    23     4  


Q ss_pred             CHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcC
Q 037955          670 SLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVK  722 (733)
Q Consensus       670 ~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g  722 (733)
                      ++++|++|| +|++.|||+++.|++++++|+.         +.|.++|++++.
T Consensus       547 ~~~~~~~l~-~i~~~G~s~~~~ell~~~tG~~---------~~~~~~l~~y~~  589 (615)
T 1r42_A          547 STEAGQKLF-NMLRLGKSEPWTLALENVVGAK---------NMNVRPLLNYFE  589 (615)
T ss_dssp             CHHHHHHHH-HHHTTTTSSCHHHHHHHHHSSS---------SCCSHHHHHHHH
T ss_pred             CHHHHHHHH-HHHhCcCCCCHHHHHHHhcCCC---------CCChHHHHHHHH
Confidence            699999999 9999999999999999999965         799999998763


No 9  
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=100.00  E-value=2e-37  Score=357.31  Aligned_cols=500  Identities=14%  Similarity=0.120  Sum_probs=345.6

Q ss_pred             HHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q 037955           89 EIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANH  168 (733)
Q Consensus        89 ~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~  168 (733)
                      +.+...+.....++.+...+..-..+...++.+++..++...++++...+..+...|+       .....+++.+|+|+.
T Consensus        10 ~~l~~~~~~~~~l~~~~~~a~w~~~t~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~~   82 (589)
T 1uze_A           10 KFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQIANHTLKYGTQARKFD-------VNQLQNTTIKRIIKK   82 (589)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------GGGCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------hhccCCHHHHHHHHH
Confidence            4555566667778888888888888888888888899999999988874443222221       111257888876665


Q ss_pred             HHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhh
Q 037955          169 LRIDFEKGGIH-LCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISW  247 (733)
Q Consensus       169 ~~~~f~~~G~~-L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~  247 (733)
                          ++..|.+ |+++.++++..+..++..+   |.++....                                      
T Consensus        83 ----l~~~g~~~L~~~~~~~~~~~~~~~~~~---~~~~~i~~--------------------------------------  117 (589)
T 1uze_A           83 ----VQDLERAALPAQELEEYNKILLDMETT---YSVATVCH--------------------------------------  117 (589)
T ss_dssp             ----HTCCGGGGSCHHHHHHHHHHHHHHHHH---HHHCEEEC--------------------------------------
T ss_pred             ----HHhcccccCCHHHHHHHHHHHHHHHHH---HHHhcccC--------------------------------------
Confidence                6667855 8988888888888866655   66643200                                      


Q ss_pred             cccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHhccCC-cchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCC
Q 037955          248 DNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQGHSVP-QANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASS  326 (733)
Q Consensus       248 ~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~~~~~-~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~s  326 (733)
                      .    ++..+++ .+.+.++|..++|++.|+.+|+++.... ..+.+.+.+++.+|+++|+++||+++.++.+   +...
T Consensus       118 ~----~~~~l~~-~~~l~~~~~~~~d~~~r~~aw~~~~~~~~~~~~~~~~~lv~l~~e~A~~~G~~~~~d~~r---~~ye  189 (589)
T 1uze_A          118 P----NGSCLQL-EPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPKYVELINQAARLNGYVDAGDSWR---SMYE  189 (589)
T ss_dssp             S----SSCEEET-TTHHHHHHHHCCCHHHHHHHHHHHHHHTHHHHTTTHHHHHHHHHHHHHHTTCSSHHHHHH---GGGC
T ss_pred             C----Ccccccc-chhHHHHHHhCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH---hcCC
Confidence            0    1123433 4689999999999999999999976533 4567899999999999999999999999886   4445


Q ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhcCCCCCCCC-----c-----------CCHHHHHHHhhhhccCCChh
Q 037955          327 PEVVKSFLLEMSKMIKPKADEEFEAIKNFKR-KSCGQKYVHLE-----P-----------WDEAYYTAMMKSSAYNLDAC  389 (733)
Q Consensus       327 pe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~-~~~g~~~~~l~-----p-----------WD~~y~~~~~~~~~~~~d~~  389 (733)
                      ++.+.++++.|.+.++|... .+....+.+. +..|.  +.+.     |           |.-.|-              
T Consensus       190 ~~~~~~~ld~l~~~l~p~~~-~Lh~y~r~kl~~~yg~--~~~~~~~~~p~hllg~~~~~~w~~~~~--------------  252 (589)
T 1uze_A          190 TPSLEQDLERLFQELQPLYL-NLHAYVRRALHRHYGA--QHINLEGPIPAHLLGNMWAQTWSNIYD--------------  252 (589)
T ss_dssp             CTTHHHHHHHHHHHTHHHHH-HHHHHHHHHHHHHHCT--TTCCTTSCEETTSSSSTTSSCCGGGHH--------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCc--cccCCCCCCchhhhcchhhcchhhhhh--------------
Confidence            77889999999999999865 3333233221 12242  1111     3           321111              


Q ss_pred             hccCCCC-----HHHH-------HHHHHHHHHHhhC-ceeEeecCCCCCccccccceeEEEcCCCCcccceeeecccCCC
Q 037955          390 VVASYFP-----LGQC-------IEGLKMLAESLFG-VTFHSVPLAPGESWHPDVLKLSLQHPEEGEMGYLYLDLYSRAG  456 (733)
Q Consensus       390 ~~~~yfp-----l~~v-------l~gl~~l~~~lfg-i~~~~~~~~~~~~wh~dV~~~~v~d~~~~~lg~~ylDl~~R~g  456 (733)
                      ...+|++     +...       .+.++.++.++|+ +.|.+++   .+.|+                    .|+++|||
T Consensus       253 ~~~p~~~~~~~dv~~~~~~~~~~~~~m~~~~~~~f~~lg~~~~~---~~~w~--------------------~d~~~rpg  309 (589)
T 1uze_A          253 LVVPFPSAPSMDTTEAMLKQGWTPRRMFKEADDFFTSLGLLPVP---PEFWN--------------------KSMLEKPT  309 (589)
T ss_dssp             HHCSCTTSCCCCHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCCC---HHHHH--------------------HCBCSCCC
T ss_pred             hhcCCCCccccchHHHHHHhcCCHHHHHHHHHHHHHHCCCCcCc---hhHHH--------------------hhcccCCC
Confidence            0122332     1111       2778888999988 6676643   24553                    57889999


Q ss_pred             CccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhh-cCCCCccCCCcccchh
Q 037955          457 KYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLS-RTDYQHFSGTRVALDF  535 (733)
Q Consensus       457 K~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls-~~~~~~~sgt~~~~D~  535 (733)
                      |..|++|.++..+...    ...|.|  ++|+...        ++||.|++||+||++|.+.. .+.+...+|+  .++|
T Consensus       310 k~r~~~chp~~~~~~~----~~d~rI--~~~t~~~--------~~d~~tl~HE~GHa~y~~~~~~~p~~~~~g~--~~~f  373 (589)
T 1uze_A          310 DGREVVCHASAWDFYN----GKDFRI--KQCTTVN--------LEDLVVAHHEMGHIQYFMQYKDLPVALREGA--NPGF  373 (589)
T ss_dssp             SSCCCCCSCEEEECSS----SSCEEE--ECCCCSS--------HHHHHHHHHHHHHHHHHHHTTTSCGGGCSCS--SHHH
T ss_pred             CCCCCccccchhccCC----CCCceE--EecCCCC--------HHHHHHHHHHHHHHHHHHHHccCChhhhcCC--CChH
Confidence            9557777665422211    123554  6676543        48999999999999998773 3333222333  3599


Q ss_pred             hhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHhhhhhhHHHHHHHHHHHHh-HHHhh---cCCCCCCCCHH
Q 037955          536 AETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGARDMFAATELQRQIFYALV-DQTLF---GERLGQTRDTS  611 (733)
Q Consensus       536 ~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~f-D~~lh---~~~~~~~~~~~  611 (733)
                      +|.+|.+++++++.+..|..++.+ .+..+.++..++.+     +..++..+.++-+..+ |+.-|   .. ..+..++.
T Consensus       374 hEa~s~~~~~s~~~~~~l~~~~ll-~~~~~~~~~~~~~l-----~~~al~~v~~~p~~~~~D~~R~~v~~g-~l~~~d~~  446 (589)
T 1uze_A          374 HEAIGDVLALSVSTPKHLHSLNLL-SSEGGSDEHDINFL-----MKMALDKIAFIPFSYLVDQWRWRVFDG-SITKENYN  446 (589)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHTTSC-CC----HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHTT-SSCTTTHH
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHh-cccCCchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHH
Confidence            999999999999999998886655 44455666666665     1222333344444443 66443   44 44567999


Q ss_pred             HHHHHHHhhccCCCCCC---CCcc-cccccccccccccchhHHHHHHHHHHHHHHHHHcC----CC-------CHHHHHH
Q 037955          612 SIVADMKRQHTSWNHVE---GTHW-HIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQED----PL-------SLTTGTT  676 (733)
Q Consensus       612 ~l~~~l~~~~~~~~~~~---~~~~-~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~~----~~-------~~~~G~~  676 (733)
                      ++|++++++|.|+.++.   ...| +.++.|+++ +++||+|.||.++|+++|..+.++.    |+       +.++|+.
T Consensus       447 ~~W~~~~~~y~Gi~pp~~~~~~~~d~~~~~H~~~-~~~Y~~Y~lg~v~a~Ql~~~~~~~~~~~~pl~~cd~~~~~~~g~~  525 (589)
T 1uze_A          447 QEWWSLRLKYQGLCPPVPRTQGDFDPGAKFHIPS-SVPYIRYFVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQR  525 (589)
T ss_dssp             HHHHHHHHHHHCEECSSCCCTTCCGGGGSTTTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCSCGGGCCCTTCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCCCccccCchhcceecC-CcchHHHHHHHHHHHHHHHHHHhhccccCCccccccccCHHHHHH
Confidence            99999999999975433   2444 457899996 8899999999999999999997652    32       5899999


Q ss_pred             HHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcC
Q 037955          677 LRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVK  722 (733)
Q Consensus       677 ~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g  722 (733)
                      | ++||+.|||+++.|++++++|++         +.|+++|++++.
T Consensus       526 l-~~il~~G~s~~~~ell~~~tG~~---------~~~~~~l~~y~~  561 (589)
T 1uze_A          526 L-ATAMKLGFSRPWPEAMQLITGQP---------NMSASAMLSYFK  561 (589)
T ss_dssp             H-HHHHTTTTSSCHHHHHHHHHSSC---------SCCSHHHHHHHH
T ss_pred             H-HHHHHccCCCCHHHHHHHHcCCC---------CCChHHHHHHHH
Confidence            9 59999999999999999999997         789999998764


No 10 
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A*
Probab=99.97  E-value=2.1e-28  Score=277.50  Aligned_cols=504  Identities=14%  Similarity=0.129  Sum_probs=306.1

Q ss_pred             HHHHHhhHHHhhhhchhhhhhccCCchHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 037955           92 RAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANHLRI  171 (733)
Q Consensus        92 ~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~~~~  171 (733)
                      ..++.-...+|.....++-..++.-.++......++....++|..+......-|..   + .-..-.|+..+|.|+.+..
T Consensus        22 ~~~~~~~~~~~~~~~~a~W~y~tnit~~~~~~~~~~~~~~~~~~~~~~~~a~~f~~---~-~~~~~~d~~~~R~l~~l~~   97 (629)
T 3nxq_A           22 QSYQSSAEQVLFQSVAASWAHDTNITAENARRQEEAALLSQEFAEAWGQKAKELYE---P-IWQQFTDPQLRRIIGAVRT   97 (629)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---T-TGGGCSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c-cccccCCHHHHHHHHHHHh
Confidence            33333333444444444444455556667777778888888887644443322220   0 0012357888988888643


Q ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccC
Q 037955          172 DFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKK  251 (733)
Q Consensus       172 ~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (733)
                      .. .  ..|+++..+++.+|..++..+   |+..-      |-+                               .++  
T Consensus        98 ~g-~--~~l~~~~~~e~n~l~s~m~~i---y~~ak------vc~-------------------------------~~g--  132 (629)
T 3nxq_A           98 LG-S--ANLPLAKRQQYNALLSQMSRI---YSTAK------VCL-------------------------------PQK--  132 (629)
T ss_dssp             CG-G--GGSCHHHHHHHHHHHHHHHHH---HHHCE------EEC------------------------------------
T ss_pred             hC-c--cCCCHHHHHHHHHHHHHHHHH---hhceE------Eec-------------------------------CCC--
Confidence            32 2  357888777777776655544   33311      100                               001  


Q ss_pred             CCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHhccC-CcchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcCCCHHHH
Q 037955          252 EKGFRITTDSRILQSILQWTSDDEVRKMVYIQGHSV-PQANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMASSPEVV  330 (733)
Q Consensus       252 ~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~~~~-~~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma~spe~V  330 (733)
                       .+..++|. |.+.++|+.++|++.|+.+|+++... .....+++.+++++|++.|+++||+||.+|....   .+++++
T Consensus       133 -~~~cl~L~-pdL~~im~~SrD~~er~~aW~~wr~~~g~~l~~~y~~~V~LrneaAk~~Gf~d~~e~wR~~---Ye~~~~  207 (629)
T 3nxq_A          133 -TATCWSLD-PDLTNILASSRSYAMLLFAWEGWHNAAGIPLKPLYEDFTALSNEAYKQDGFTDTGAYWRSW---YNSPTF  207 (629)
T ss_dssp             -CCCEEETT-THHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHT---TCCTTH
T ss_pred             -Ccccccch-hHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHh---cCHHHH
Confidence             01235553 78999999999999999999999643 3567899999999999999999999999996443   347889


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHhc----CC---CCCCCCcCCH----------HHHHHHh-h--hhccCCChhh
Q 037955          331 KSFLLEMSKMIKPKADEEFEAIKNFKRKSC----GQ---KYVHLEPWDE----------AYYTAMM-K--SSAYNLDACV  390 (733)
Q Consensus       331 ~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~----g~---~~~~l~pWD~----------~y~~~~~-~--~~~~~~d~~~  390 (733)
                      .+|+++|++.++|+.++    |+.+.++.+    |.   ..+..-||++          .+|.... -  ...++|+...
T Consensus       208 ~~~~e~l~~~i~PLy~~----Lha~vR~~L~~~Yg~~~i~~~g~iPaHLlgnmw~q~W~~~yd~~~Pf~~~~~~dvt~~m  283 (629)
T 3nxq_A          208 EDDLEHLYQQLEPLYLN----LHAFVRRALHRRYGDRYINLRGPIPAHLLGDMWAQSWENIYDMVVPFPDKPNLDVTSTM  283 (629)
T ss_dssp             HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCTTTCCTTSCEETTSSSSTTSCCCGGGHHHHCSCTTSCCCCCHHHH
T ss_pred             HHHHHHHHHHHhhHHHH----HHHHHHHHHHHhccccccCCCCCcChhhccchhhhchhhhcccccCCCCCCcccchHHH
Confidence            99999999999999877    555554433    31   1234556554          1121110 0  0112222222


Q ss_pred             ccCCCCHHHHHHHHHHHHHHhhC-ceeEeecCCCCCccccccceeEEEcCCCCcccceeeecccCCCCccCcccccccCc
Q 037955          391 VASYFPLGQCIEGLKMLAESLFG-VTFHSVPLAPGESWHPDVLKLSLQHPEEGEMGYLYLDLYSRAGKYTGCANFAIKGG  469 (733)
Q Consensus       391 ~~~yfpl~~vl~gl~~l~~~lfg-i~~~~~~~~~~~~wh~dV~~~~v~d~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~  469 (733)
                      ....+...    .|+..+++.|. +.|.++|   .+.|.                    -|++.|+||.+|.+|....-.
T Consensus       284 ~~qg~t~~----~mf~~ae~ff~sLGl~~~~---~~Fw~--------------------~sl~~kp~d~~~~~Chasawd  336 (629)
T 3nxq_A          284 LQQGWQAT----HMFRVAEEFFTSLELSPMP---PEFWE--------------------GSMLEKPADGREVVCHASAWD  336 (629)
T ss_dssp             HHHTCCHH----HHHHHHHHHHHHTTCCCCC---HHHHH--------------------HCBCSCCSSSCCCCCSCEEEE
T ss_pred             HHcCCCHH----HHHHHHHHHHHHcCCCcCC---hHHHH--------------------HHHHcCCCCCCCCCcCcchhh
Confidence            33333333    35555555442 2222222   23342                    178899999777676542111


Q ss_pred             eecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhcCCCCc---cCCCcccch--hhhhhHHHHH
Q 037955          470 RRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSRTDYQH---FSGTRVALD--FAETPSNLFE  544 (733)
Q Consensus       470 ~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~~~~~~---~sgt~~~~D--~~E~pS~~~E  544 (733)
                      .      +..+-+.|.+|+..+.        +|+.|+.||+||..+.+.. .. ++   ..|.+....  ++|+.|+.| 
T Consensus       337 ~------~~~~d~rIk~C~~~t~--------~D~~t~hHEmGH~qy~~~y-~~-~P~~~r~~anpgfhEAige~~slS~-  399 (629)
T 3nxq_A          337 F------YNRKDFRIKQCTRVTM--------DQLSTVHHEMGHIQYYLQY-KD-LPVSLRRGANPGFHEAIGDVLALSV-  399 (629)
T ss_dssp             C------SSSSCEEEECCCCSSH--------HHHHHHHHHHHHHHHHHHS-TT-SCGGGCSCSSHHHHHHHHHHHHHHH-
T ss_pred             c------ccCcCceEEECCCCCH--------HHHHHHHHHHHHHHHHHHH-hc-CCccccCCCCchHHHHHHHHHHHHc-
Confidence            1      0112233577877655        8999999999996665443 32 33   233333233  667777776 


Q ss_pred             HhhhcHHHHHHHHhcccCCCCC-hHHHHHHHHH-h---hhhh---hHHHHHHHHHHHHhHHHhhcCCCCCCCCHHHHHHH
Q 037955          545 YYAWDYRVLRRFAKHYLTGEIV-PEKLVKSMQG-A---RDMF---AATELQRQIFYALVDQTLFGERLGQTRDTSSIVAD  616 (733)
Q Consensus       545 ~~~~~~~~L~~~s~h~~tge~l-p~~l~~~l~~-~---~~~~---~~~~~~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~  616 (733)
                         ..|..|+++.---  ...- .+..++.+.. +   ..+.   ..++..|..+   |+     + ..+..+.++.|++
T Consensus       400 ---~Tp~hL~~igLl~--~~~~~~e~~in~l~~~aL~~i~fLPf~~~vD~wrw~v---f~-----g-~it~~d~n~~Wwe  465 (629)
T 3nxq_A          400 ---STPEHLHKIGLLD--RVTNDTESDINYLLKMALEKIAFLPFGYLVDQWRWGV---FS-----G-RTPPSRYNFDWWY  465 (629)
T ss_dssp             ---TSHHHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH---HH-----T-SSCGGGHHHHHHH
T ss_pred             ---CCHHHHHHcCCcc--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hc-----C-CCCHHHHHHHHHH
Confidence               6677777654311  0111 1222332221 1   1121   2233333332   22     2 3356789999999


Q ss_pred             HHhhccCC-CCCC--CCcc-cccccccccccccchhHHHHHHHHHHHHHHHHHcC----C-------CCHHHHHHHHHHH
Q 037955          617 MKRQHTSW-NHVE--GTHW-HIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQED----P-------LSLTTGTTLRTKI  681 (733)
Q Consensus       617 l~~~~~~~-~~~~--~~~~-~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~~----~-------~~~~~G~~~r~~v  681 (733)
                      +.++|.|+ |+.+  +..+ +..+-|+++. ++|..|..|.++|.++|+.+.+.-    |       -++++|+.|+ ++
T Consensus       466 L~~~Y~Gi~Pp~dr~~~~fD~gak~Hi~~~-~yYi~Y~La~I~afQf~~alc~~~~~~~pL~~cdi~~~~~Ag~~L~-~~  543 (629)
T 3nxq_A          466 LRTKYQGICPPVTRNETHFDAGAKFHVPNV-TPYIRYFVSFVLQFQFHEALCKEAGYEGPLHQCDIYRSTKAGAKLR-KV  543 (629)
T ss_dssp             HHHHHHCEECSSCCCTTCCGGGGSTTTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCSCGGGCCCTTCHHHHHHHH-HH
T ss_pred             HHHHhCCCCCCCCCCccccCccceEEEecC-ccHHHHHHHHHHHHHHHHHHHHhcCCccccccccccCHHHHHHHHH-HH
Confidence            99999987 3333  2222 2345688854 678999999999999999988721    1       2578999998 99


Q ss_pred             hcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcC
Q 037955          682 LQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVK  722 (733)
Q Consensus       682 L~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g  722 (733)
                      ++.|+|+++.|+++.++|..         +.+.+++++.+.
T Consensus       544 l~~G~S~~w~Elle~~tG~~---------~~sa~~ll~Yf~  575 (629)
T 3nxq_A          544 LRAGSSRPWQEVLKDMVGLD---------ALDAQPLLKYFQ  575 (629)
T ss_dssp             HHHTTSSCHHHHHHHHHSCS---------SCCSHHHHHHHH
T ss_pred             HhCCCCCCHHHHHHHhcCCC---------CCChHHHHHHHH
Confidence            99999999999999999974         578888877653


No 11 
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A
Probab=99.93  E-value=1.5e-22  Score=232.18  Aligned_cols=510  Identities=13%  Similarity=0.123  Sum_probs=299.8

Q ss_pred             HHHHHHHHhhHHHhhhhchhhhhhccCCchHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCC-CHHHHHHHH
Q 037955           89 EIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGHLL-SKEAHRAAN  167 (733)
Q Consensus        89 ~~v~~ld~~~~~l~~~~~~~~~~~~~~~d~e~r~aa~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L-~~e~~r~l~  167 (733)
                      +.+..+++....++.....+..-..+...++..++..++.+.++.+..++.      +..+..  +...+ +++-++.++
T Consensus        11 ~~L~~~~~~~~~l~~~~~~a~wd~~t~~~~~~~~~~~e~~~~l~~~~~~~~------~~~~~f--~~~~l~~~~~~~~l~   82 (598)
T 2x96_A           11 EYLENLNKELAKRTNVETEAAWAYGSNITDENEKKKNEISAELAKFMKEVA------SDTTKF--QWRSYQSEDLKRQFK   82 (598)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHH------HHHTTS--CGGGCSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHHH------Hhhccc--chhhcCCHHHHHHHH
Confidence            344445555556777777777666677666666666677888888876433      221111  01223 444476666


Q ss_pred             HHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhh
Q 037955          168 HLRIDFEKGG-IHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLIS  246 (733)
Q Consensus       168 ~~~~~f~~~G-~~L~~~~r~~~~~l~~~i~~L~~~F~~ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~  246 (733)
                      .+.    ..| ..|+++.++++.++..+   +...|.....      -+.                              
T Consensus        83 ~l~----~~~~~~l~~~~~~~~~~l~~~---~~~~y~~a~v------~~~------------------------------  119 (598)
T 2x96_A           83 ALT----KLGYAALPEDDYAELLDTLSA---MESNFAKVKV------CDY------------------------------  119 (598)
T ss_dssp             HHH----CCGGGGSCHHHHHHHHHHHHH---HHHHHHHCCB------CCS------------------------------
T ss_pred             HHH----hhhhccCCHHHHHHHHHHHHH---HHHHHHhccc------ccc------------------------------
Confidence            653    344 34666666665555554   3344544211      000                              


Q ss_pred             hcccCCCCEEEec-CCCcHHHHhhhCCCHHHHHHHHHHhcc-CCcchHHHHHHHHHHHHHHHHHcCCCCHHHHHhccCcC
Q 037955          247 WDNKKEKGFRITT-DSRILQSILQWTSDDEVRKMVYIQGHS-VPQANHEVLHELIAARNELAQIMGYRSYAEFIVMPNMA  324 (733)
Q Consensus       247 ~~~~~~~g~~i~l-~~~~~~~vL~~~~d~~~Rk~~~~a~~~-~~~~n~~~l~~ll~lR~e~A~llGy~sya~~~l~~~ma  324 (733)
                       .    +|...++ -++.+..+|..+.|++.|+.+|+++.. ....-.+.|.+++++|++.|+.+||+++.++.+..-  
T Consensus       120 -~----~~~~~~l~l~~~l~~~~a~s~d~~~~~~aW~~~r~~~~~~~~~~~~~lV~L~~e~A~~~G~~~~~d~~r~~Y--  192 (598)
T 2x96_A          120 -K----DSTKCDLALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTKAAKLNNFTSGAEAWLDEY--  192 (598)
T ss_dssp             -S----CTTCCCBCTTTHHHHHHHHCCCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHTTCSSHHHHHHGGG--
T ss_pred             -C----CccccccCCCHHHHHHHHHCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHcc--
Confidence             0    0001111 146788899889999999999999753 236678999999999999999999999999996552  


Q ss_pred             CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH----HhcCCCCCCCCcC----------------CHHH-HHHHhh-hh
Q 037955          325 SSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKR----KSCGQKYVHLEPW----------------DEAY-YTAMMK-SS  382 (733)
Q Consensus       325 ~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~----~~~g~~~~~l~pW----------------D~~y-~~~~~~-~~  382 (733)
                       .|+.+.++++.|.+.++|...+    |+.+.+    +..|  .+.+.+|                ...| ...-.. +.
T Consensus       193 -E~~~~~~~ld~i~~~l~pl~~~----Lh~~vr~~l~~~yg--~~~~~~~~~~p~hllg~mw~q~w~~~~dl~~pfp~~~  265 (598)
T 2x96_A          193 -EDDTFEQQLEDIFADIRPLYQQ----IHGYVRFRLRKHYG--DAVVSETGPIPMHLLGNMWAQQWSEIADIVSPFPEKP  265 (598)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHC--TTTSCSSSCEEGGGSSSTTCSCCGGGHHHHCSCTTSC
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcC--ccccCCCCCCchhhhcchhhccccchhhccCCCCCcC
Confidence             3667788999999999987766    433332    2225  3334444                3111 000000 00


Q ss_pred             ccCCChhhccCCCCHHHHHHHHHHHHHHhhC-ceeEeecCCCCCccccccceeEEEcCCCCcccceeeecccCCCCccCc
Q 037955          383 AYNLDACVVASYFPLGQCIEGLKMLAESLFG-VTFHSVPLAPGESWHPDVLKLSLQHPEEGEMGYLYLDLYSRAGKYTGC  461 (733)
Q Consensus       383 ~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfg-i~~~~~~~~~~~~wh~dV~~~~v~d~~~~~lg~~ylDl~~R~gK~~ga  461 (733)
                      .+++++..+..-++.    ..++.++.++|. +.|.+.+   ++.|..                    .++.||||-.+.
T Consensus       266 ~~d~t~~~~~~~~t~----~~m~~~~~~~~~slG~~~~~---~~f~~~--------------------sm~~rp~~~rd~  318 (598)
T 2x96_A          266 LVDVSAEMEKQGYTP----LKMFQMGDDFFTSMNLTKLP---QDFWDK--------------------SIIEKPTDGRDL  318 (598)
T ss_dssp             CCCCHHHHHHTTCCH----HHHHHHHHHHHHHTTCCCCC---HHHHHH--------------------CBCSCCSSSCCC
T ss_pred             cCChhHHHHHccccH----HHHHHHHHHHHHHcCCCccc---hHHHHH--------------------HHHcCccCCCCC
Confidence            112222212222222    244455554443 2222221   223321                    234787775566


Q ss_pred             ccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhcCCCCccCC--Ccccchhhhhh
Q 037955          462 ANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSRTDYQHFSG--TRVALDFAETP  539 (733)
Q Consensus       462 ~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~~~~~~~sg--t~~~~D~~E~p  539 (733)
                      +|.++..+...    ..-|.  |.+|+....        +|+.|+.||+||++|.+ .... +++ +  .....-|.|..
T Consensus       319 ~chp~a~~~~~----~~D~R--I~~~t~~~~--------~d~~~~~HE~GHa~Y~~-~~~~-~P~-~~r~ga~~g~HEs~  381 (598)
T 2x96_A          319 VCHASAWDFYL----TDDVR--IKQCTRVTQ--------DQLFTVHHELGHIQYFL-QYQH-QPF-VYRTGANPGFHEAV  381 (598)
T ss_dssp             CCSCEEEECSS----SSCEE--EECCCCSSH--------HHHHHHHHHHHHHHHHH-HHTT-SCG-GGCSCSSHHHHHHH
T ss_pred             CcCCCccccCC----CCCce--EeeCCCCCh--------hhHhHHHHHHHHHHHHH-HHcC-CCc-hhccCCCCcHHHHH
Confidence            66655322210    12244  467766554        89999999999999964 3322 334 3  22345667877


Q ss_pred             HHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHH-HHhhhhhhHHHHHHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHH
Q 037955          540 SNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSM-QGARDMFAATELQRQIFYALVDQTLFGERLGQTRDTSSIVADMK  618 (733)
Q Consensus       540 S~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l-~~~~~~~~~~~~~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~  618 (733)
                      |..+-.-+.-+..|+.|.. ...-..-.+.-++.+ ..+.+...-+  --.++.-.|...++.. ..+..++++.|+++.
T Consensus       382 s~~i~~S~~~~~~l~~~gl-l~~~~~~~~~~i~~l~~~al~~v~~l--P~~i~lDrf~~~v~~g-~i~~~d~~~~W~~l~  457 (598)
T 2x96_A          382 GDVLSLSVSTPKHLEKIGL-LKDYVRDDEARINQLFLTALDKIVFL--PFAFTMDKYRWSLFRG-EVDKANWNCAFWKLR  457 (598)
T ss_dssp             HHHHHHHHTSHHHHHHTTC-SCSCCCCHHHHHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHTT-CSCGGGHHHHHHHHH
T ss_pred             HHHHHhhHhHHHHHHHcCc-ccccccchhhhHHHHHHHHHhHhhhc--cHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence            6555444444444543321 011000112223333 2222222211  1123444677778876 456688999999999


Q ss_pred             hhccCCCCCC---CCc-ccccccccccccccchhHHHHHHHHHHHHHHHHHc----------CC-----C--CHHHHHHH
Q 037955          619 RQHTSWNHVE---GTH-WHIRFSHFINYGAGYYSYLYAKCFAATIWQKLCQE----------DP-----L--SLTTGTTL  677 (733)
Q Consensus       619 ~~~~~~~~~~---~~~-~~~~f~Hl~~Y~a~YYsYl~s~v~A~di~~~~~~~----------~~-----~--~~~~G~~~  677 (733)
                      ++|.|+.++.   +.. -+..+.|+++ +.+|.+|..|.++|+++|..+.+.          ++     +  ++++|+.|
T Consensus       458 ~~YlGi~pp~~r~~~~~D~gak~H~~~-~~pY~~Y~Lg~i~a~Qf~~a~~~~~~~~~~~~~~~~l~~~d~~~s~~a~~~L  536 (598)
T 2x96_A          458 DEYSGIEPPVVRSEKDFDAPAKYHISA-DVEYLRYLVSFIIQFQFYKSACIKAGQYDPDNVELPLDNCDIYGSAAAGAAF  536 (598)
T ss_dssp             HHHHCEECSSCEETTCCCGGGSHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCTTSCGGGCCCTTCHHHHHHH
T ss_pred             HHhCCCCCCCCCCccccccccceeeeC-CCCchHHHHHHHHHHHHHHHHHHhcccccccccccccccCCccCcHHHHHHH
Confidence            9999975432   111 1234478884 245899999999999999998752          33     1  47899999


Q ss_pred             HHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHcC
Q 037955          678 RTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEVK  722 (733)
Q Consensus       678 r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~g  722 (733)
                       ++|++.|+|+++.|+++.++|..         +.|+++|++++.
T Consensus       537 -~~i~~~G~s~~~~ell~~~tG~~---------~l~~~~ll~Y~~  571 (598)
T 2x96_A          537 -HNMLSMGASKPWPDALEAFNGER---------IMSGKAIAEYFE  571 (598)
T ss_dssp             -HHHHTTTTSSCHHHHHHHHHSCC---------SCCSHHHHHHHH
T ss_pred             -HHHHHccCCCCHHHHHHHHhCCC---------CCChHHHHHHHH
Confidence             69999999999999999999984         588899988764


No 12 
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A
Probab=99.91  E-value=6.2e-21  Score=211.11  Aligned_cols=419  Identities=16%  Similarity=0.143  Sum_probs=285.6

Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 037955          125 SKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQ  204 (733)
Q Consensus       125 ~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~  204 (733)
                      .++...|+....++.+++.+.+.|..+.. ...|++.+++.++.+.++++++ ..+|.+..+++..+..+-...-.+..+
T Consensus        47 ~e~~a~L~~~~h~~~t~~~~~~~l~~~~~-~~~l~~~~~a~lr~~~r~~~~~-~~iP~~l~~~~~~~~s~~~~~W~~ar~  124 (499)
T 1ka2_A           47 SVAQGELSVLSHELLLHPEFVNLVEKAKG-LENLNEYERGIVRVLDRSIRIA-RAFPPEFIREVSETTSLATKAWEEAKA  124 (499)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHT-CSSCCHHHHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45566788888999999999999998854 5679999999999999999974 356777666666665544444333322


Q ss_pred             hcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHh
Q 037955          205 NIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQG  284 (733)
Q Consensus       205 ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~  284 (733)
                      +                                            .                                  
T Consensus       125 ~--------------------------------------------~----------------------------------  126 (499)
T 1ka2_A          125 K--------------------------------------------D----------------------------------  126 (499)
T ss_dssp             T--------------------------------------------T----------------------------------
T ss_pred             h--------------------------------------------C----------------------------------
Confidence            1                                            0                                  


Q ss_pred             ccCCcchHHHHHHHHHHHHHHHHHcCCCC-HHHHHhcc---CcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Q 037955          285 HSVPQANHEVLHELIAARNELAQIMGYRS-YAEFIVMP---NMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRKSC  360 (733)
Q Consensus       285 ~~~~~~n~~~l~~ll~lR~e~A~llGy~s-ya~~~l~~---~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~  360 (733)
                        ....-.+.|++++.++.+.|+.+|+.. -.|..|..   .|  +.+.+..++..|.+.+.|..++    +..   +  
T Consensus       127 --Df~~f~p~L~~vv~l~re~A~~~~~~~~~YDaLLd~yEpg~--t~~~ld~iF~~Lk~~l~~li~~----i~~---~--  193 (499)
T 1ka2_A          127 --DFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGL--RTRDVEKMFEVLEKKLKPLLDK----ILE---E--  193 (499)
T ss_dssp             --CGGGTHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHSTTC--CHHHHHHHHHHHHHHHHHHHHH----HHH---T--
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHhCCCC--CHHHHHHHHHHHHHhHHHHHHH----HHc---C--
Confidence              012346889999999999999999976 46777766   45  7999999999999888776654    111   1  


Q ss_pred             CCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEcCC
Q 037955          361 GQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQHPE  440 (733)
Q Consensus       361 g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d~~  440 (733)
                      +   ....+ +                 ..+...||.+....-...++ +.+|..|                        
T Consensus       194 ~---~~~~~-~-----------------~~l~~~~~~~~Q~~l~~~~~-~~~G~d~------------------------  227 (499)
T 1ka2_A          194 G---KVPRE-H-----------------PLEKEKYEREWMERVNLWIL-QKFGFPL------------------------  227 (499)
T ss_dssp             T---CSCSC-C-----------------GGGTCBCCHHHHHHHHHHHH-HHHTCCB------------------------
T ss_pred             C---CCCCc-c-----------------ccccCCCCHHHHHHHHHHHH-HHcCCCC------------------------
Confidence            1   00111 0                 01245677777654443433 4455322                        


Q ss_pred             CCccc-ceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhh
Q 037955          441 EGEMG-YLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLS  519 (733)
Q Consensus       441 ~~~lg-~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls  519 (733)
                          . ..++|.-+      |.||.++.++           -+-|.+||.+...      .+.+.++.||+|||+|....
T Consensus       228 ----~~~grlD~s~------HPF~~~~~~~-----------DvRITTry~e~d~------~~~l~~~iHE~GHAlYeq~l  280 (499)
T 1ka2_A          228 ----GTRARLDVSA------HPFTTEFGIR-----------DVRITTRYEGYDF------RRTILSTVHEFGHALYELQQ  280 (499)
T ss_dssp             ----TTTEEEEECS------SCCEEEEETT-----------EEEEEECCCSBCT------HHHHHHHHHHHHHHHHHHTC
T ss_pred             ----ccCceecCCC------CCCcCCCCCC-----------CeeEEeeecCccH------HHHHHHHHHHhhHHHHHcCC
Confidence                2 34665544      4577665321           1445789987631      26888999999999998866


Q ss_pred             cCCCC-ccCCCcccchhhhhhHHHHHHhh-hcHHHHHHHH----hccc-CCCCChHHHHHHHHHhhhhh------hHHHH
Q 037955          520 RTDYQ-HFSGTRVALDFAETPSNLFEYYA-WDYRVLRRFA----KHYL-TGEIVPEKLVKSMQGARDMF------AATEL  586 (733)
Q Consensus       520 ~~~~~-~~sgt~~~~D~~E~pS~~~E~~~-~~~~~L~~~s----~h~~-tge~lp~~l~~~l~~~~~~~------~~~~~  586 (733)
                      ...|. ...|..+++-+.|..|.|+||.+ ..+.+++.+.    .++. -+..-++.+...++.....+      .-...
T Consensus       281 ~~~~~~tpl~~~~smgiHESQS~f~En~vgrS~~F~~~~~p~l~~~f~~l~~~~~e~~~~~~n~V~pslIRveADEltY~  360 (499)
T 1ka2_A          281 DERFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPVLKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYN  360 (499)
T ss_dssp             CGGGTTSTTSSCCCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHCGGGGGCCHHHHHHHHTCCCCCSCGGGCCTTTHH
T ss_pred             ChhHccCCccCCCCCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCccCCCCHHHHHHHhCccCccceeeeccccchh
Confidence            54321 23356789999999999999954 4455544442    2221 11222344433333222111      11346


Q ss_pred             HHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCCCCcccccccccc-cccccchhHHHHHHHHHHHHHHHHH
Q 037955          587 QRQIFYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVEGTHWHIRFSHFI-NYGAGYYSYLYAKCFAATIWQKLCQ  665 (733)
Q Consensus       587 ~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~f~Hl~-~Y~a~YYsYl~s~v~A~di~~~~~~  665 (733)
                      ++.++...|+.+++.+ ..+..|+.++|++..++|.|+.+..+.....+-.|-+ |.-+||++|++|.++|+++|+...+
T Consensus       361 lHIilRyeiEk~Li~g-~l~v~DLp~~Wn~~~~eylGi~p~~d~~G~lQDvHWs~G~fGYFPtYtLG~l~AaQl~~~~~~  439 (499)
T 1ka2_A          361 FHILLRFKLERLMVSE-EIKAKDLPEMWNDEMERLLGIRPRKYSEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKK  439 (499)
T ss_dssp             HHHHHHHHHHHHHHHS-CCCGGGHHHHHHHHHHHHHSCCCSSGGGTTTSCSHHHHTCTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC-CCChHHHHHHHHHHHHHHcCCCCCCCCCceeeeccccCcccCcchHHHHHHHHHHHHHHHHHH
Confidence            7888999999999976 4567899999999999999976554332224556665 3323568999999999999998765


Q ss_pred             c----------CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHc
Q 037955          666 E----------DPLSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEV  721 (733)
Q Consensus       666 ~----------~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~  721 (733)
                      +          |.+++ ...++|+.|++.|++.+|.|++++.+|.          ++|++.|+++|
T Consensus       440 ~~p~~~~~i~~Gd~~~-i~~WL~e~I~~~G~~~~~~eLl~~~tGe----------~l~~~~f~~yL  494 (499)
T 1ka2_A          440 DIPDFEEKVAKAEFDP-IKAWLREKIHRWGSIYPPKELLKKAIGE----------DMDAEYFVRWV  494 (499)
T ss_dssp             HCTTHHHHHHHTCCHH-HHHHHHHHTGGGTTSSCHHHHHHHHHSS----------CCCTHHHHHHH
T ss_pred             hcccHHHHHHcCCcHH-HHHHHHHHHHHhhCCCCHHHHHHHHhCC----------CCCHHHHHHHH
Confidence            4          34543 5689999999999999999999999999          69999999987


No 13 
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=99.87  E-value=1.8e-18  Score=190.38  Aligned_cols=419  Identities=15%  Similarity=0.172  Sum_probs=278.9

Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 037955          125 SKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQ  204 (733)
Q Consensus       125 ~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~  204 (733)
                      .++...|+....++.+++.+-+.|..+......|++.+++.|+.+.++++++ ..+|++.-+++..+..+-...-.+..+
T Consensus        44 ~e~~a~Ls~~~h~~~t~~~~~~~l~~~~~~~~~l~~~~~a~lr~~~r~~~~~-~~iP~~lv~~~~~~~s~~~~~W~~Ar~  122 (501)
T 3hq2_A           44 AESIGQLSTDIFNIQTSDRMKELIDVLYERFDDLSEDTKKAVELAKKEYEEN-KKIPEAEYKEYVILCSKAETAWEEAKG  122 (501)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556677888889999999999998885434468899999999999999884 456776555555544433332222222


Q ss_pred             hcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHh
Q 037955          205 NIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQG  284 (733)
Q Consensus       205 ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~  284 (733)
                      +                                                                               
T Consensus       123 ~-------------------------------------------------------------------------------  123 (501)
T 3hq2_A          123 K-------------------------------------------------------------------------------  123 (501)
T ss_dssp             T-------------------------------------------------------------------------------
T ss_pred             h-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccCCcchHHHHHHHHHHHHHHHHHcCCC-CHHHHHhcc---CcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Q 037955          285 HSVPQANHEVLHELIAARNELAQIMGYR-SYAEFIVMP---NMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRKSC  360 (733)
Q Consensus       285 ~~~~~~n~~~l~~ll~lR~e~A~llGy~-sya~~~l~~---~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~~~  360 (733)
                       +....-.+.|++++.+..+.|..+|+. +-.|..|..   .|  +.+.+..++.+|.+.+.|+.++    +..   +  
T Consensus       124 -nDf~~F~P~L~~vv~l~re~A~~~~~~~~pYDaLLd~yEpg~--t~~~ld~iF~~Lk~~l~~Li~~----i~~---~--  191 (501)
T 3hq2_A          124 -SDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEPGV--TVKVLDQLFAELKEAIIPLVKQ----VTA---S--  191 (501)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHHCCSSCTTHHHHHHHSTTC--CHHHHHHHHHHHHHHHHHHHHH----HHS---S--
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHHH----HHh---c--
Confidence             001123588999999999999999985 555766665   45  7999999999999988887655    211   0  


Q ss_pred             CCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEcCC
Q 037955          361 GQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQHPE  440 (733)
Q Consensus       361 g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d~~  440 (733)
                      +  .   .                 .+...+...||.+...+-...++ +.+|..|.                       
T Consensus       192 ~--~---~-----------------~~~~~l~~~~~~~~Q~~l~~~~l-~~lGfD~~-----------------------  225 (501)
T 3hq2_A          192 G--N---K-----------------PDTSFITKAFPKEKQKELSLYFL-QELGYDFD-----------------------  225 (501)
T ss_dssp             T--T---C-----------------CCCTTTSSCCCHHHHHHHHHHHH-HHTTCCTT-----------------------
T ss_pred             C--C---C-----------------CCccccCCCCCHHHHHHHHHHHH-HHcCCCcc-----------------------
Confidence            1  0   0                 01111234677776655444433 45553221                       


Q ss_pred             CCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhhhc
Q 037955          441 EGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       441 ~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~lls~  520 (733)
                           ..      |-++..|.||.++.++           -|-|.++|.....      .+.+.+..||.|||++..-..
T Consensus       226 -----~G------Rld~S~HPF~~~~~~~-----------DvRITTry~e~d~------~~~l~s~iHE~GHAlYEqgl~  277 (501)
T 3hq2_A          226 -----GG------RLDETVHPFATTLNRG-----------DVRVTTRYDEKDF------RTAIFGTIHECGHAIYEQNID  277 (501)
T ss_dssp             -----SC------CEEECSSCCEEEEETT-----------EEEEEECCCTTCT------HHHHHHHHHHHHHHHHHTTSC
T ss_pred             -----cc------eeCCCCCCCCCCCCCC-----------CeEEeeeecCccH------HHHHHHHHHHHhHHHHHcCCC
Confidence                 11      3456788898766332           1445778876531      268899999999999976433


Q ss_pred             CCCC-ccCCCcccchhhhhhHHHHHHhhhcH-HHH----HHHHhccc--CCCCChHHHHHHHHHhhhhh------hHHHH
Q 037955          521 TDYQ-HFSGTRVALDFAETPSNLFEYYAWDY-RVL----RRFAKHYL--TGEIVPEKLVKSMQGARDMF------AATEL  586 (733)
Q Consensus       521 ~~~~-~~sgt~~~~D~~E~pS~~~E~~~~~~-~~L----~~~s~h~~--tge~lp~~l~~~l~~~~~~~------~~~~~  586 (733)
                      ..+. ...|..+++-+.|..|.|+||.+... .++    ..+-.|+.  .+..-++++...++..+..+      .-+..
T Consensus       278 ~~~~~tPlg~~~SmgiHESQSrf~En~vGRS~~F~~~~~p~l~~~f~~~~~~~s~e~~y~~~n~V~pslIRveADElTY~  357 (501)
T 3hq2_A          278 EALSGTNLSDGASMGIHESQSLFYENFIGRNKHFWTPYYKKIQEASPVQFKDISLDDFVRAINESKPSFIRVEADELTYP  357 (501)
T ss_dssp             GGGTTSSSSSCSCHHHHHHHHHHHHTTTTTSGGGGTTTHHHHHHHSTTTTTTCCHHHHHHHHTCCCCCSCGGGCCTTTHH
T ss_pred             hhhccCcccCCccchhHHHHHHHHHHHHccCHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHcccCCCceeehhhhhhHH
Confidence            3222 23456689999999999999986542 211    22233442  12233455555444332211      12346


Q ss_pred             HHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCCCCcccccccccc-cccccchhHHHHHHHHHHHHHHHHH
Q 037955          587 QRQIFYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVEGTHWHIRFSHFI-NYGAGYYSYLYAKCFAATIWQKLCQ  665 (733)
Q Consensus       587 ~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~f~Hl~-~Y~a~YYsYl~s~v~A~di~~~~~~  665 (733)
                      +..++...++..+..+ ..+..|+.++|++..++|.|+.++.+.....+-.|-. |.-+||.+|+.|.++|+++|+...+
T Consensus       358 lHIilRyEiEk~li~g-~l~v~dLp~~Wn~~~~~ylGv~p~~d~~G~LQDiHWs~G~fGYFPsY~LG~~~AaQl~~a~~~  436 (501)
T 3hq2_A          358 LHIIIRYEIEKAIFSN-EVSVEDLPSLWNQKYQDYLGITPQTDAEGILQDVHWAGGDFGYFPSYALGYMYAAQLKQKMLE  436 (501)
T ss_dssp             HHHHHHHHHHHHHHTT-CSCGGGHHHHHHHHHHHHHSCCCSSTTTTTTSCSTTTTTCTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC-CCChHHHHHHHHHHHHHhCCCCCCCCcccccccccccCCCccchHHHHHHHHHHHHHHHHHHH
Confidence            6778888999999976 4456899999999999999985543222222334443 3323478999999999999998765


Q ss_pred             c----------CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHc
Q 037955          666 E----------DPLSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEV  721 (733)
Q Consensus       666 ~----------~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~  721 (733)
                      +          |.+. ....++++.|.+.|++.+|.|++++++|.          ++|++.|+++|
T Consensus       437 ~~p~~~~~i~~Gdf~-~i~~WL~e~i~~~G~~~~~~ell~~aTGe----------~l~~~~~~~yL  491 (501)
T 3hq2_A          437 DLPEFDALLERGEFH-PIKQWLTEKVHIHGKRKKPLDIIKDATGE----------ELNVRYLIDYL  491 (501)
T ss_dssp             HCTTHHHHHHHTCCH-HHHHHHHHHTTTTTTSSCHHHHHHHHHSS----------SCCHHHHHHHH
T ss_pred             HCCCHHHHHHcCChH-HHHHHHHHHHHhhhcCCCHHHHHHHHhCC----------CCCHHHHHHHH
Confidence            3          2333 36689999999999999999999999999          69999999987


No 14 
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A
Probab=99.82  E-value=1.4e-16  Score=176.03  Aligned_cols=411  Identities=17%  Similarity=0.168  Sum_probs=269.8

Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 037955          125 SKASMRISEYLHYLNTNHTLYDAVKKAEL--DGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREF  202 (733)
Q Consensus       125 ~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~--~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F  202 (733)
                      .++...|+....++.+++.+-+.|..+..  ....|++.+++.++.+.++++++ ..+|++.-+++..+..+-..     
T Consensus        44 ~e~~a~L~~~~h~~~t~~~~~~~l~~~~~~~~~~~l~~~~~a~lr~~~r~~~~~-~~iP~~lv~~~~~~~s~~~~-----  117 (509)
T 3hoa_A           44 ARQMAALARLLHQRMTDPRIGEWLEKVEGSPLVQDPLSDAAVNVREWRQAYERA-RAIPERLAVELAQAESEAES-----  117 (509)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHTTSGGGSSTTSHHHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHHHh-hCCCHHHHHHHHHHHHHHHH-----
Confidence            35566788888999999999999998832  23457888888888888888874 23465544444333332221     


Q ss_pred             HhhcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHH
Q 037955          203 NQNIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYI  282 (733)
Q Consensus       203 ~~ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~  282 (733)
                                                                                                   +|+
T Consensus       118 -----------------------------------------------------------------------------~W~  120 (509)
T 3hoa_A          118 -----------------------------------------------------------------------------FWE  120 (509)
T ss_dssp             -----------------------------------------------------------------------------HHH
T ss_pred             -----------------------------------------------------------------------------HHH
Confidence                                                                                         221


Q ss_pred             Hhcc--CCcchHHHHHHHHHHHHHHHHHcCC----------CCHHHHHhcc---CcCCCHHHHHHHHHHHHHhhhHHHHH
Q 037955          283 QGHS--VPQANHEVLHELIAARNELAQIMGY----------RSYAEFIVMP---NMASSPEVVKSFLLEMSKMIKPKADE  347 (733)
Q Consensus       283 a~~~--~~~~n~~~l~~ll~lR~e~A~llGy----------~sya~~~l~~---~ma~spe~V~~fL~~l~~~~~p~~~~  347 (733)
                      ....  ....-.+.|++++.+..+.|..+|+          .+-.|..|..   .|  +.+.+..++.+|.+.+.|+.++
T Consensus       121 ~Ar~~~Df~~F~P~L~~vv~l~re~A~~~~~~~~~~~~~~~~~~YDaLLd~yEpg~--t~~~ld~iF~~Lk~~l~~Ll~~  198 (509)
T 3hoa_A          121 EARPRDDWRGFLPYLKRVYALTKEKAEVLFALPPAPGDPPYGELYDALLDGYEPGM--RARELLPLFAELKEGLKGLLDR  198 (509)
T ss_dssp             HHTTTTCHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTSCCCCSHHHHHHHHHSTTC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHcCcccccccccCCCCHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHHH
Confidence            1111  0112358899999999999999998          2556777766   45  7999999999999888887655


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCcc
Q 037955          348 EFEAIKNFKRKSCGQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESW  427 (733)
Q Consensus       348 e~~~L~~~~~~~~g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~w  427 (733)
                          +.+   +  +  .   .                 .+...+...||.+...+-...++ +.+|..|           
T Consensus       199 ----i~~---~--~--~---~-----------------~~~~~l~~~~~~~~Q~~l~~~~~-~~lGfD~-----------  235 (509)
T 3hoa_A          199 ----ILG---S--G--K---R-----------------PDTSILHRPYPVEAQRRFALELL-SACGYDL-----------  235 (509)
T ss_dssp             ----HHT---C--S--C---C-----------------CCGGGGGSCCCHHHHHHHHHHHH-HHHTCCG-----------
T ss_pred             ----HHh---c--C--C---C-----------------CCccccCCCCCHHHHHHHHHHHH-HHcCCCc-----------
Confidence                211   0  1  0   0                 01112244677776655444444 4455322           


Q ss_pred             ccccceeEEEcCCCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHH
Q 037955          428 HPDVLKLSLQHPEEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLF  507 (733)
Q Consensus       428 h~dV~~~~v~d~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLf  507 (733)
                                       ....+|      +..|.||.++.++.           |-|.++|.....      ...+.+..
T Consensus       236 -----------------~~gRlD------~s~HPF~~~~~~~D-----------vRITTry~e~d~------~~~l~s~i  275 (509)
T 3hoa_A          236 -----------------EAGRLD------PTAHPFEIAIGPGD-----------VRITTRYYEDFF------NAGIFGTL  275 (509)
T ss_dssp             -----------------GGEEEE------ECSSCCEEEEETTE-----------EEEEECCBTTBH------HHHHHHHH
T ss_pred             -----------------ccceec------CCCCCCCCCCCCCC-----------eEEeeecCcccH------HHHHHHHH
Confidence                             123444      46788887663221           445677765421      14577778


Q ss_pred             HHHHHHHHHhhhcCCCC-ccCCCcccchhhhhhHHHHHHh-hhcHHHHHHHH----hcccC-CCCChHHHHHHHHHhhhh
Q 037955          508 HEFGHALHSLLSRTDYQ-HFSGTRVALDFAETPSNLFEYY-AWDYRVLRRFA----KHYLT-GEIVPEKLVKSMQGARDM  580 (733)
Q Consensus       508 HEfGHalH~lls~~~~~-~~sgt~~~~D~~E~pS~~~E~~-~~~~~~L~~~s----~h~~t-ge~lp~~l~~~l~~~~~~  580 (733)
                      ||+|||+...-....+. ...|..+++-+.|..|.|+||. .....+++.+.    .|+.. +..-++++...++.....
T Consensus       276 HE~GHAlYEqgl~~~~~~tPlg~~~SmgiHESQSrf~En~vGRS~~F~~~~~p~l~~~f~~~~~~s~e~~y~~~N~V~ps  355 (509)
T 3hoa_A          276 HEMGHALYEQGLPKEHWGTPRGDAVSLGVHESQSRTWENLVGRSLGFWERFFPRAREVFASLGDVSLEDFHFAVNAVEPS  355 (509)
T ss_dssp             HHHHHHHHHHHSCGGGTTSGGGSCCCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHCGGGTTCCHHHHHHHTTCCCCC
T ss_pred             HHhhHHHHHcCCChhHccCCCccCCccceeHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHhhcCCC
Confidence            99999999665433322 2345567899999999999994 44545444333    23321 233345554444322211


Q ss_pred             h------hHHHHHHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCC-------CCcccccccccccccccch
Q 037955          581 F------AATELQRQIFYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVE-------GTHWHIRFSHFINYGAGYY  647 (733)
Q Consensus       581 ~------~~~~~~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------~~~~~~~f~Hl~~Y~a~YY  647 (733)
                      +      .-+..+..++...++.+|-.+ ..+..|+.++|++..++|.|+.+..       +.||.   .-.||   ||-
T Consensus       356 lIRveADElTY~lHIilRyEiEk~Li~G-~l~v~DLP~~Wn~km~eyLGi~p~~d~~G~LQDiHWs---~G~fG---YFP  428 (509)
T 3hoa_A          356 LIRVEADEVTYNLHILVRLELELALFRG-ELSPEDLPEAWAEKYRDHLGVAPKDYKDGVMQDVHWA---GGLFG---YFP  428 (509)
T ss_dssp             SCGGGCCTTTHHHHHHHHHHHHHHHHTT-SCCGGGHHHHHHHHHHHHHSCCCSSSTTTTTSCSTTT---TTCCS---CTH
T ss_pred             cceeehhhhhhhhHHHHHHHHHHHHHcC-CCChhhHHHHHHHHHHHhcCCCCCCCCCCcccccccc---CCCcc---cch
Confidence            1      113456677777889999876 3456899999999999999975443       24563   11333   378


Q ss_pred             hHHHHHHHHHHHHHHHHHc----------CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHH
Q 037955          648 SYLYAKCFAATIWQKLCQE----------DPLSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSF  717 (733)
Q Consensus       648 sYl~s~v~A~di~~~~~~~----------~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~  717 (733)
                      ||+.|.++|+++|+...++          |.+.+ ...++|+.|.+.|++.+|.|++++.+|.          ++|++.|
T Consensus       429 sY~LG~~yAAQl~~a~~~~~pd~~~~i~~Gd~~~-i~~WL~e~Ih~~G~~~~~~eLl~~aTGe----------~ln~~~f  497 (509)
T 3hoa_A          429 TYTLGNLYAAQFFQKAEAELGPLEPRFARGEFQP-FLDWTRARIHAEGSRFRPRVLVERVTGE----------APSARPF  497 (509)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHTCCHH-HHHHHHHHTGGGTTSSCHHHHHHHHHSS----------CCCSHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCHHHHHHcCChHH-HHHHHHHHHHhhhcCCCHHHHHHHHhCC----------CCCHHHH
Confidence            9999999999999876542          34443 5689999999999999999999999999          6999999


Q ss_pred             HHHc
Q 037955          718 SDEV  721 (733)
Q Consensus       718 l~~~  721 (733)
                      +++|
T Consensus       498 ~~yL  501 (509)
T 3hoa_A          498 LAYL  501 (509)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987


No 15 
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=99.81  E-value=2.9e-16  Score=172.99  Aligned_cols=414  Identities=14%  Similarity=0.116  Sum_probs=275.3

Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 037955          125 SKASMRISEYLHYLNTNHTLYDAVKKAELDGHLLSKEAHRAANHLRIDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQ  204 (733)
Q Consensus       125 ~~~~~~l~~~~~~l~~~~~Ly~~l~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~~i~~L~~~F~~  204 (733)
                      .++...|+....++.+++.+-+.|..+......|++.+++.|+.+.++++++ ..+|++.-+++..+..+-...-.+..+
T Consensus        43 ~e~~a~Ls~~~h~~~t~~~~~~ll~~~~~~~~~l~~~~~a~lr~~~r~~~~~-~~iP~elv~~~~~~~s~~~~~W~~Ar~  121 (505)
T 3dwc_A           43 GAAMAELQLHMHDTITAPKIRALIEEAEKSVGDLEKLQRANLREMRRAWELE-NLLPEEFVERKTVLTTKAHQVWKTCRE  121 (505)
T ss_dssp             HHHHHHHHHHHHHHHHSHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556678888889999999999999885444468898999999988888874 345666545554444433222222111


Q ss_pred             hcccCCCCcccccCCCCCHHHHHhhccccccCCCCCcchhhhhcccCCCCEEEecCCCcHHHHhhhCCCHHHHHHHHHHh
Q 037955          205 NIINDPGHVDIFPESRIPKHIHHLLKPICRLTSGPSRESLISWDNKKEKGFRITTDSRILQSILQWTSDDEVRKMVYIQG  284 (733)
Q Consensus       205 ni~~~~~~v~~~~l~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~vL~~~~d~~~Rk~~~~a~  284 (733)
                      +                                                                               
T Consensus       122 ~-------------------------------------------------------------------------------  122 (505)
T 3dwc_A          122 K-------------------------------------------------------------------------------  122 (505)
T ss_dssp             H-------------------------------------------------------------------------------
T ss_pred             h-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccCCcchHHHHHHHHHHHHHHHHHcCCC---CHHHHHhcc---CcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 037955          285 HSVPQANHEVLHELIAARNELAQIMGYR---SYAEFIVMP---NMASSPEVVKSFLLEMSKMIKPKADEEFEAIKNFKRK  358 (733)
Q Consensus       285 ~~~~~~n~~~l~~ll~lR~e~A~llGy~---sya~~~l~~---~ma~spe~V~~fL~~l~~~~~p~~~~e~~~L~~~~~~  358 (733)
                       +....-.+.|++++.+..+.|..+|+.   +-.|..|..   .|  +.+.+..++.+|.+.+.|+.++    +....+.
T Consensus       123 -nDf~~F~P~L~~vv~l~re~A~~~~~~~~~~pYDaLLd~yEpg~--t~~~ld~iF~~lk~~L~~Ll~~----i~~~~~~  195 (505)
T 3dwc_A          123 -NDFAGFLPTLKELIALFREEGKLRAGNSGKHPYEALVDIYEPGM--TLQRLDEIFGNVRSWLPELLKE----VQEKQKA  195 (505)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHSTTC--CHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHcCcccCCCcHHHHHHhhCCCC--CHHHHHHHHHHHHHHHHHHHHH----HHhcccc
Confidence             011123588999999999999999984   767877766   45  8999999999999999888766    3222110


Q ss_pred             hcCCCCCCCCcCCHHHHHHHhhhhccCCChhhccCCCCHHHHHHHHHHHHHHhhCceeEeecCCCCCccccccceeEEEc
Q 037955          359 SCGQKYVHLEPWDEAYYTAMMKSSAYNLDACVVASYFPLGQCIEGLKMLAESLFGVTFHSVPLAPGESWHPDVLKLSLQH  438 (733)
Q Consensus       359 ~~g~~~~~l~pWD~~y~~~~~~~~~~~~d~~~~~~yfpl~~vl~gl~~l~~~lfgi~~~~~~~~~~~~wh~dV~~~~v~d  438 (733)
                      . .  .+.                      ..+...||.+....-...++ +.+|..|                      
T Consensus       196 ~-~--~~~----------------------~~~~~~~~~~~Q~~l~~~~l-~~lGfD~----------------------  227 (505)
T 3dwc_A          196 L-G--ETV----------------------LEPKGPFPVSKQEALCRFFM-DVWKFDF----------------------  227 (505)
T ss_dssp             H-T--CCC----------------------CCCCCCCCHHHHHHHHHHHH-HHTTCCT----------------------
T ss_pred             C-C--CCc----------------------cccCCCCCHHHHHHHHHHHH-HHcCCCC----------------------
Confidence            0 1  000                      01123566666544433433 4555322                      


Q ss_pred             CCCCcccceeeecccCCCCccCcccccccCceecCCCCccccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHhh
Q 037955          439 PEEGEMGYLYLDLYSRAGKYTGCANFAIKGGRRLSETEYQLPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSLL  518 (733)
Q Consensus       439 ~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~~~~~g~~~~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~ll  518 (733)
                            ....+|      ...|.||.++ ++.           |-|.++|.....      ...+....||.|||+...-
T Consensus       228 ------~~gRld------~S~HPF~~g~-~~D-----------vRITTry~e~d~------~~~l~s~iHE~GHAlYEqg  277 (505)
T 3dwc_A          228 ------DGGRLD------VSAHPFCGNS-KED-----------VRITTKYTETEF------VTSLLGVIHETGHAKYEQN  277 (505)
T ss_dssp             ------TSEEEE------ECSSCCEEEE-TTE-----------EEEEECCBTTBC------HHHHHHHHHHHHHHHHHHT
T ss_pred             ------ccceec------CCCCCCCCCC-CCC-----------eEEecccCcccH------HHHHHHHHHHHhHHHHHcC
Confidence                  123443      3667788766 321           445677765431      2688899999999999654


Q ss_pred             h-cCCC-CccCCCcccchhhhhhHHHHHHh-hhcHHHHHHHH----hcccCCCCC-hHHHHHHHHHhhhhh------hHH
Q 037955          519 S-RTDY-QHFSGTRVALDFAETPSNLFEYY-AWDYRVLRRFA----KHYLTGEIV-PEKLVKSMQGARDMF------AAT  584 (733)
Q Consensus       519 s-~~~~-~~~sgt~~~~D~~E~pS~~~E~~-~~~~~~L~~~s----~h~~tge~l-p~~l~~~l~~~~~~~------~~~  584 (733)
                      . ...+ ....|..+++-+.|..|.|+||. ...+.+++.+.    .|+...... ++++...++..+..+      .-+
T Consensus       278 l~~~~~~~tPlg~~~SmgiHESQSrf~En~vGRS~~F~~~~~p~l~~~f~~~~~~s~e~~y~~~n~V~pslIRveADEvT  357 (505)
T 3dwc_A          278 CGPKGFETQPVCMARSLGVHEGQSLFAEMQIGRSGAFMEFLAPRLVEYFGDQPAFTSSNMKRVIQRVSPGLIRIDADELC  357 (505)
T ss_dssp             CSCTTCTTSTTSSCSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHTCCCCCSCGGGCCTTT
T ss_pred             CCChHHccCcCcCCccccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHhcccCCCceeeehhhhh
Confidence            3 3322 22445668899999999999984 44555444332    344322223 455555444332221      123


Q ss_pred             HHHHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCC-C-------CCcccccccccccccccchhHHHHHHHH
Q 037955          585 ELQRQIFYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHV-E-------GTHWHIRFSHFINYGAGYYSYLYAKCFA  656 (733)
Q Consensus       585 ~~~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-------~~~~~~~f~Hl~~Y~a~YYsYl~s~v~A  656 (733)
                      ..++.++...++.+|-.+ ..+..|+.++|++..++|.|+.+. .       +.||.   .-.||   ||-||+.|.++|
T Consensus       358 Y~lHIilRyEiEk~Li~G-~l~v~DLP~~Wn~km~eyLGi~p~~nd~~G~LQDiHWs---~G~fG---YFPsY~LG~~yA  430 (505)
T 3dwc_A          358 YPLHVMLRYEIERDLMDG-NIEAEEVPRVWNEKMKSYLGLETLGNDKEGCLQDVHWS---GGMFG---YFPTYSLGAMVA  430 (505)
T ss_dssp             HHHHHHHHHHHHHHHHHT-SSCGGGHHHHHHHHHHHHHSCCCTTCCTTTTTSCSTTT---TTCCS---CTHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHcC-CCChhhHHHHHHHHHHHhcCCCCCCCCCCCcccccccc---CCCCc---cchhHHHHHHHH
Confidence            456777778889888876 345689999999999999997544 2       34663   12333   378999999999


Q ss_pred             HHHHHHHHHc------------CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCcccccCCCCCCChHHHHHHc
Q 037955          657 ATIWQKLCQE------------DPLSLTTGTTLRTKILQHGGAKEPADMLNDLVGDGILRYCNGGIVPDITSFSDEV  721 (733)
Q Consensus       657 ~di~~~~~~~------------~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~flGrd~~~~~~~g~~p~~~a~l~~~  721 (733)
                      +++|+...++            |.+.+ .-.++|+.|.+.|+..+|.|++++.+|.          ++|++.|+++|
T Consensus       431 AQl~~a~~~~~pd~~~~~~i~~Gdf~~-i~~WL~e~Ih~~G~~~~~~eLi~~aTGe----------~ln~~~f~~yL  496 (505)
T 3dwc_A          431 AQLMSCVRRELGEEVVDDCIRKGDLGK-ILAKQNEKIWQHGSSLTTDELLRQATGE----------TLNPEHYRRHL  496 (505)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHTTCCHH-HHHHHHHHTGGGTTSSCHHHHHHHHHSS----------SCCTHHHHHHH
T ss_pred             HHHHHHHHHHCCCccHHHHHHcCChHH-HHHHHHHHHHhhhcCCCHHHHHHHHhCC----------CCCHHHHHHHH
Confidence            9999875442            33443 5689999999999999999999999999          69999999987


No 16 
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=75.53  E-value=4.2  Score=39.20  Aligned_cols=56  Identities=13%  Similarity=0.180  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHhhC-ceeEeec-CCCCCccccccceeEEEc----------CCCCcccceeeeccc
Q 037955          398 GQCIEGLKMLAESLFG-VTFHSVP-LAPGESWHPDVLKLSLQH----------PEEGEMGYLYLDLYS  453 (733)
Q Consensus       398 ~~vl~gl~~l~~~lfg-i~~~~~~-~~~~~~wh~dV~~~~v~d----------~~~~~lg~~ylDl~~  453 (733)
                      ..+++.+...+++.|+ +.++..+ ..|...+++.-..|...+          .....++....|++.
T Consensus        36 ~~~l~~l~~~l~~~f~~l~V~~~~~~~p~~a~d~~r~Qy~a~~iL~~l~~~~~~~d~a~llT~~Dl~~  103 (195)
T 2x7m_A           36 SSIVDRFEEHVSEYLGEVKVKKKRAKLPEHAYSKVRGQYLARALLDTLRGMKGEYDRVLGLTSEDLYA  103 (195)
T ss_dssp             HHHHHHHHHHHHHHHCSCEEEEEECCCCGGGEETTTTEEEHHHHHHHHHTCCSCCSEEEEEESSCEEC
T ss_pred             HHHHHHHHHHHHHHhCCceEEEecCCCCccccCCCCccCcHHHHHHHHHhcCCCCcEEEEEEeccCCC
Confidence            4677788888889998 7766644 234455666666664321          012355666777765


No 17 
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=70.04  E-value=6.2  Score=36.86  Aligned_cols=103  Identities=17%  Similarity=0.192  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHhhCceeEeecCCCC--CccccccceeEEEc------CCCCcccceeeecccCCCCccCcccccccCce
Q 037955          399 QCIEGLKMLAESLFGVTFHSVPLAPG--ESWHPDVLKLSLQH------PEEGEMGYLYLDLYSRAGKYTGCANFAIKGGR  470 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~~~~~--~~wh~dV~~~~v~d------~~~~~lg~~ylDl~~R~gK~~ga~~~~i~~~~  470 (733)
                      ..++.+..-+.+.||++.+-.+..+.  ..++++=..|...+      .....+|....|+|. +|   -+|.+++... 
T Consensus        16 ~~l~~l~~~l~~~~gl~v~~~~~~~~~~~~~d~~r~Q~~a~~il~~l~~~d~~~~lt~~Dly~-~g---~~fvfG~a~~-   90 (163)
T 4axq_A           16 HTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLPPIKVTLGVTGKDIYA-KG---MNFVFGEAEL-   90 (163)
T ss_dssp             HHHHHHHHHHHHHHTEEEEECCCBCCCGGGEETTTTEEEHHHHHHHSCCCSSEEEEESSCEEC-TT---CSCBSEEECT-
T ss_pred             HHHHHHHHHHHHHhCCeeEecCCCCCchhccCCCcceeeHHHHHHHHHhcCeEEEEEecccCc-CC---CccceEEeec-
Confidence            45666767778889988776543222  24444333342110      113456777889987 44   3444443211 


Q ss_pred             ecCCCCccccEEEE-EccCCCCCCCCCCcChhhHHHHHHHHHHHHH
Q 037955          471 RLSETEYQLPVVAL-ICNFPGSHNLSVRLNHHEVETLFHEFGHALH  515 (733)
Q Consensus       471 ~~~~g~~~~P~v~l-~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH  515 (733)
                             ..-+.++ +..+.++  ...++...=..++.||+||.+-
T Consensus        91 -------~~~~aVvS~~Rl~~~--~~~~~~~r~~k~~~HElGH~lG  127 (163)
T 4axq_A           91 -------GGARAVLSVFRLTTA--DSELYRERVVKEAVHEIGHVLG  127 (163)
T ss_dssp             -------TSSEEEEECGGGCCS--CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -------CCceEEEEecccCCc--cHHHHHHHHHHHHHHHHHHHcC
Confidence                   0111211 1222221  1123344567789999999863


No 18 
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=69.78  E-value=13  Score=41.01  Aligned_cols=23  Identities=4%  Similarity=-0.156  Sum_probs=16.8

Q ss_pred             HHHHHHHHHHHHHhhCceeEeec
Q 037955          398 GQCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       398 ~~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      ..++...+...+++-+|+|++++
T Consensus       102 ~~~i~~Af~~Ws~vt~L~F~ev~  124 (479)
T 1kap_P          102 QAQAKLSLQSWSDVTNIHFVDAG  124 (479)
T ss_dssp             HHHHHHHHHHHHTTBSEEEEEEE
T ss_pred             HHHHHHHHHHHhcccCeeEEEcC
Confidence            34456666777788889999985


No 19 
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=67.67  E-value=2.1  Score=39.71  Aligned_cols=22  Identities=14%  Similarity=0.095  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+...+..-.|+|+++.
T Consensus        28 ~~i~~A~~~W~~~t~l~F~~~~   49 (160)
T 2jsd_A           28 KAVEMALQAWSSAVPLSFVRIN   49 (160)
T ss_dssp             HHHHHHHHHHHHHSSCEEEECS
T ss_pred             HHHHHHHHHHHccCCeeEEEec
Confidence            3455556667778899999875


No 20 
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=65.95  E-value=2.4  Score=39.72  Aligned_cols=22  Identities=18%  Similarity=0.070  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-+..-+|+|++++
T Consensus        31 ~~i~~A~~~W~~~~~l~F~~v~   52 (167)
T 2xs4_A           31 NAIRSAFALWSDKSTLSFIQVY   52 (167)
T ss_dssp             HHHHHHHHHHHHTSSCEEEECS
T ss_pred             HHHHHHHHHHhccCCceEEEeC
Confidence            4455566667788899999884


No 21 
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=63.87  E-value=2.8  Score=39.57  Aligned_cols=22  Identities=18%  Similarity=0.172  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+...+++-+|+|+++.
T Consensus        33 ~~i~~A~~~W~~~t~l~F~~~~   54 (173)
T 1hy7_A           33 SAVEKALKVWEEVTPLTFSRLY   54 (173)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHHhCCCcceEEec
Confidence            3455566667788889999875


No 22 
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=63.42  E-value=2.5  Score=39.40  Aligned_cols=22  Identities=18%  Similarity=0.108  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-+++-.|+|++++
T Consensus        30 ~~i~~A~~~W~~~~~l~F~e~~   51 (159)
T 2ovx_A           30 DAFARAFALWSAVTPLTFTRVY   51 (159)
T ss_dssp             HHHHHHHHHHHTSSSCEEEECS
T ss_pred             HHHHHHHHHHHccCCeeEEEec
Confidence            4455556667778889999875


No 23 
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=61.92  E-value=2.7  Score=39.49  Aligned_cols=22  Identities=27%  Similarity=0.261  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+...+++-.|+|+++.
T Consensus        31 ~~i~~A~~~W~~~t~l~F~~~~   52 (168)
T 1cge_A           31 HAIEKAFQLWSNVTPLTFTKVS   52 (168)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHhhccCceeEEec
Confidence            4455566667788889999875


No 24 
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=60.43  E-value=24  Score=38.71  Aligned_cols=20  Identities=15%  Similarity=-0.079  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHhhCceeEe
Q 037955          399 QCIEGLKMLAESLFGVTFHS  418 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~  418 (733)
                      .++...+...+++-+|+|++
T Consensus        87 ~~i~~A~~~Ws~vt~L~F~e  106 (463)
T 1g9k_A           87 EQAKLSLESWADVAKVTFTE  106 (463)
T ss_dssp             HHHHHHHHHHHTTBSEEEEE
T ss_pred             HHHHHHHHHHhcccCceEEE
Confidence            44566677778888999999


No 25 
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=58.31  E-value=3.4  Score=38.63  Aligned_cols=22  Identities=18%  Similarity=0.158  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-++.-+|+|+++.
T Consensus        32 ~~i~~A~~~W~~~t~l~F~e~~   53 (165)
T 1hv5_A           32 QTVAEALQVWSEVTPLTFTEVH   53 (165)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHHcccCeeEEEec
Confidence            3455566667788889999885


No 26 
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=57.99  E-value=5.6  Score=41.07  Aligned_cols=30  Identities=27%  Similarity=0.201  Sum_probs=20.6

Q ss_pred             ccEEEEEccCCCCCCCCCCcChhhHHHHHHHHHHHHHHh
Q 037955          479 LPVVALICNFPGSHNLSVRLNHHEVETLFHEFGHALHSL  517 (733)
Q Consensus       479 ~P~v~l~~Nf~~~~~~~~lL~~~~v~TLfHEfGHalH~l  517 (733)
                      .|+|++..+.  +.       ...-.||+||+||.+.+-
T Consensus        82 ~~~I~LN~~~--~~-------~rqrFTLAHELGHllLh~  111 (301)
T 3dte_A           82 HHVILINSQV--RP-------ERQRFTLAHEISHALLLG  111 (301)
T ss_dssp             TTEEEEETTS--CH-------HHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCC--Ch-------hhHHHHHHHHHHHHHhcc
Confidence            3677654443  22       168899999999997543


No 27 
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=56.66  E-value=4.4  Score=36.44  Aligned_cols=15  Identities=33%  Similarity=0.448  Sum_probs=12.8

Q ss_pred             hhHHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHALH  515 (733)
Q Consensus       501 ~~v~TLfHEfGHalH  515 (733)
                      +.+.+..|||||+|-
T Consensus        76 ~~~~v~aHE~GH~LG   90 (132)
T 1c7k_A           76 DSTRVTAHETGHVLG   90 (132)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CCceEEeeeehhccC
Confidence            467899999999984


No 28 
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=55.81  E-value=4.7  Score=37.60  Aligned_cols=22  Identities=14%  Similarity=0.093  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+...++.-.|+|+++.
T Consensus        32 ~~i~~A~~~W~~~t~l~F~e~~   53 (163)
T 1i76_A           32 RAIKDAFELWSVASPLIFTRIS   53 (163)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHhcCCCcceEEec
Confidence            3455556667778889999875


No 29 
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=54.56  E-value=19  Score=34.77  Aligned_cols=17  Identities=24%  Similarity=0.415  Sum_probs=13.5

Q ss_pred             hHHHHHHHHHHHHHHhh
Q 037955          502 EVETLFHEFGHALHSLL  518 (733)
Q Consensus       502 ~v~TLfHEfGHalH~ll  518 (733)
                      ..-|..|||||||=.+-
T Consensus        87 ~~g~i~HEl~HalGf~H  103 (201)
T 3edh_A           87 KFGIVVHELGHVVGFWH  103 (201)
T ss_dssp             SHHHHHHHHHHHHTBCC
T ss_pred             ccchhHHHHHHHhcchh
Confidence            56899999999985443


No 30 
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=52.13  E-value=34  Score=33.81  Aligned_cols=18  Identities=22%  Similarity=0.217  Sum_probs=14.0

Q ss_pred             hHHHHHHHHHHHHHHhhh
Q 037955          502 EVETLFHEFGHALHSLLS  519 (733)
Q Consensus       502 ~v~TLfHEfGHalH~lls  519 (733)
                      ..-|+.|||||||=..--
T Consensus       120 ~~g~i~HEl~HaLGf~HE  137 (235)
T 3lq0_A          120 YHGTILHALMHAIGFYHE  137 (235)
T ss_dssp             SHHHHHHHHHHHHHBCCG
T ss_pred             ccchHHHHHHHHhcccee
Confidence            468999999999964433


No 31 
>4dv8_A Lethal factor; endopeptidase, zinc dependent, hydrolase; HET: 0LX; 1.63A {Bacillus anthracis} PDB: 1yqy_A* 2l0r_A
Probab=50.59  E-value=6.3  Score=42.37  Aligned_cols=19  Identities=37%  Similarity=0.735  Sum_probs=16.5

Q ss_pred             hhHHHHHHHHHHHHHHhhh
Q 037955          501 HEVETLFHEFGHALHSLLS  519 (733)
Q Consensus       501 ~~v~TLfHEfGHalH~lls  519 (733)
                      .+..|+.|||||++-.+..
T Consensus       429 ~ds~tlLHEfGHaVD~~vg  447 (526)
T 4dv8_A          429 NDSEGFIHEFGHAVDDYAG  447 (526)
T ss_dssp             SHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHh
Confidence            5889999999999987664


No 32 
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=49.17  E-value=5.7  Score=40.01  Aligned_cols=22  Identities=18%  Similarity=0.172  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+...+.+-.|+|+++.
T Consensus       115 ~~i~~A~~~W~~vt~l~F~e~~  136 (255)
T 1slm_A          115 SAVEKALKVWEEVTPLTFSRLY  136 (255)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHHhcCCeeEEEec
Confidence            3455566667778889999875


No 33 
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=48.18  E-value=6.2  Score=36.95  Aligned_cols=22  Identities=5%  Similarity=0.048  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-+++-+|+|++++
T Consensus        33 ~~i~~A~~~W~~vt~l~F~ev~   54 (167)
T 3ayu_A           33 DAFARAFQVWSDVTPLRFSRIH   54 (167)
T ss_dssp             HHHHHHHHHHHTSSSCEEEECS
T ss_pred             HHHHHHHHHHhcCCCeeEEEec
Confidence            4455566667778889999885


No 34 
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=47.94  E-value=6.3  Score=36.56  Aligned_cols=22  Identities=9%  Similarity=0.076  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-+++-.|+|++++
T Consensus        28 ~~i~~A~~~W~~~t~l~F~e~~   49 (159)
T 1y93_A           28 YAIRKAFQVWSNVTPLKFSKIN   49 (159)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECS
T ss_pred             HHHHHHHHHHhccCCceEEEec
Confidence            3455556667777889999885


No 35 
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=45.75  E-value=8.5  Score=36.00  Aligned_cols=22  Identities=23%  Similarity=0.298  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHHhhCceeEeec
Q 037955          399 QCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      .++...+..-+++-+|+|++++
T Consensus        27 ~~i~~A~~~W~~v~~l~F~ev~   48 (169)
T 1rm8_A           27 KAIRRAFDVWQNVTPLTFEEVP   48 (169)
T ss_dssp             HHHHHHHHHHHTTSSCEEEECC
T ss_pred             HHHHHHHHHHHhcCCceeEEec
Confidence            3445556666778889999885


No 36 
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=45.72  E-value=8.5  Score=36.28  Aligned_cols=23  Identities=9%  Similarity=0.042  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHHHhhCceeEeec
Q 037955          398 GQCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       398 ~~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      ..++...+..-+++-+|+|+++.
T Consensus        33 ~~~i~~A~~~W~~vt~l~F~ev~   55 (174)
T 2y6d_A           33 DRLVSKALNMWGKEIPLHFRKVV   55 (174)
T ss_dssp             HHHHHHHHHHHHTTSSCEEEECC
T ss_pred             HHHHHHHHHHHHhccCeeEEEec
Confidence            34455666677778889999875


No 37 
>1j7n_A Lethal factor precursor; anthrax, lethal toxin, zinc metalloprotease, mapkk, MEK; 2.30A {Bacillus anthracis} SCOP: d.92.1.14 d.92.1.14 d.166.1.1 PDB: 1jky_A 1pwp_A* 1pwq_A* 1pwv_A 1zxv_A* 1pwu_A* 1pww_A 3kwv_C
Probab=44.27  E-value=10  Score=42.56  Aligned_cols=18  Identities=39%  Similarity=0.768  Sum_probs=15.9

Q ss_pred             hhHHHHHHHHHHHHHHhh
Q 037955          501 HEVETLFHEFGHALHSLL  518 (733)
Q Consensus       501 ~~v~TLfHEfGHalH~ll  518 (733)
                      .++.+++|||||++-.+.
T Consensus       679 ~dsn~lLHEfGHaVD~lv  696 (776)
T 1j7n_A          679 NDSEGFIHEFGHAVDDYA  696 (776)
T ss_dssp             SHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHH
Confidence            478999999999999873


No 38 
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=40.66  E-value=10  Score=41.71  Aligned_cols=22  Identities=14%  Similarity=-0.026  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHhhCceeEeecC
Q 037955          400 CIEGLKMLAESLFGVTFHSVPL  421 (733)
Q Consensus       400 vl~gl~~l~~~lfgi~~~~~~~  421 (733)
                      ++...+...+++-+|+|++++.
T Consensus        88 ~i~~Af~~Ws~vt~L~F~ev~~  109 (471)
T 1sat_A           88 QAKLSLQSWADVANITFTEVAA  109 (471)
T ss_dssp             HHHHHHHHHHHHBSEEEEECCT
T ss_pred             HHHHHHHHhhccCCeeEEEcCC
Confidence            4556667778888999999863


No 39 
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=40.22  E-value=9.7  Score=36.51  Aligned_cols=14  Identities=43%  Similarity=0.458  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       132 ~~a~~~AHElGH~l  145 (197)
T 1bud_A          132 LVAITLAHEMAHNL  145 (197)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhc
Confidence            45789999999987


No 40 
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=39.75  E-value=9.9  Score=36.60  Aligned_cols=14  Identities=43%  Similarity=0.629  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       135 ~~a~~~AHElGH~l  148 (202)
T 2w15_A          135 WVAVTMAHELGHNL  148 (202)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhc
Confidence            46789999999986


No 41 
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=39.36  E-value=10  Score=36.36  Aligned_cols=14  Identities=43%  Similarity=0.601  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       134 ~~a~~~AHElGH~l  147 (197)
T 1qua_A          134 LMAVTMAHELGHNL  147 (197)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            46789999999986


No 42 
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=38.08  E-value=80  Score=35.78  Aligned_cols=167  Identities=14%  Similarity=0.132  Sum_probs=83.7

Q ss_pred             hhhHHHHHHHH--HHHHHHhhhcCCCCccCCCcccchhhhhhHHHHHHhhhcHHHHHHHHhcccCCCCChHHHHHHHHHh
Q 037955          500 HHEVETLFHEF--GHALHSLLSRTDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLRRFAKHYLTGEIVPEKLVKSMQGA  577 (733)
Q Consensus       500 ~~~v~TLfHEf--GHalH~lls~~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~~~s~h~~tge~lp~~l~~~l~~~  577 (733)
                      +.-..|++||-  ||-++..+.... ..++-.+   -+. ..+-+-|=|+.-.+.|..=..-|. +  -|...+-.|.. 
T Consensus       430 ~~l~tl~~HEg~PGHhlQ~~~~~~~-~~~~~~R---~~~-~~~a~~EGWAlYaE~l~~e~G~~~-~--dp~~~lg~L~~-  500 (609)
T 3o0y_A          430 FGLKTLTYHEANPGHHWQIALNLDQ-AELPFLR---RIA-PYNAYTEGWALYSEQVAYELGMYE-N--DPFGDLGRLQA-  500 (609)
T ss_dssp             GGHHHHHHHHSTTTHHHHHHHHHTC-TTSCHHH---HTC-CCHHHHHHHHHHHHHHHHHTTTTT-T--CHHHHHHHHHH-
T ss_pred             hhHHHHHHhhccccHHHHHHHHHhc-CCCCHHH---Hhc-ccccccChHHHHHHHHHHHhCCCC-C--CHHHHHHHHHH-
Confidence            44556789997  999998886431 1111000   000 113344555543332211001121 1  24433333311 


Q ss_pred             hhhhhHHHHHHHHHHHHhHHHhhcCCCCCCCCHHHHHHHHHhhccCCCCCCC-CcccccccccccccccchhHHHHHHHH
Q 037955          578 RDMFAATELQRQIFYALVDQTLFGERLGQTRDTSSIVADMKRQHTSWNHVEG-THWHIRFSHFINYGAGYYSYLYAKCFA  656 (733)
Q Consensus       578 ~~~~~~~~~~~ql~~a~fD~~lh~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~f~Hl~~Y~a~YYsYl~s~v~A  656 (733)
                              .+...+...+|.-+|....    +..+...= ..+..++....- .-+    .-.+..++++-+|.+|+..=
T Consensus       501 --------~l~Ra~R~vvD~giH~~gw----t~eqa~~~-l~~~~~~~~~~a~~Ev----~Ry~~~Pgqa~sY~~G~~~i  563 (609)
T 3o0y_A          501 --------ELFRAVRLVVDTGLHDKRW----TREQAISY-MSEQTGTAESDVVAEI----ERYMAWPGQALGYKLGMLKI  563 (609)
T ss_dssp             --------HHHHHHHHHHHHHHHTSCC----CHHHHHHH-HHHHHCCCHHHHHHHH----HHHHHSTTGGGHHHHHHHHH
T ss_pred             --------HHHHHHHHHhhHHhhhcCC----CHHHHHHH-HHHhcCCChHHHHHHH----HHHHhCchHHHhHHHHHHHH
Confidence                    2233556679999998632    23333222 233333221110 001    11123566666999998777


Q ss_pred             HHHHHHHHH--cCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHh
Q 037955          657 ATIWQKLCQ--EDPLSLTTGTTLRTKILQHGGAKEPADMLNDL  697 (733)
Q Consensus       657 ~di~~~~~~--~~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~f  697 (733)
                      .++-....+  ++.|+.   +.|-+.||+.|+.  |.++|++.
T Consensus       564 ~~LR~~a~~~lG~~Fdl---k~FHd~vL~~G~~--Pl~vL~~~  601 (609)
T 3o0y_A          564 LSLREQAKARLGDKFDL---AEFHDVVLLNGAV--PMAVLSRN  601 (609)
T ss_dssp             HHHHHHHHHHHGGGCCH---HHHHHHHHTTCSC--CHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCH---HHHHHHHHhCCCC--CHHHHHHH
Confidence            777666544  445774   7888889998743  56777764


No 43 
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=37.83  E-value=12  Score=41.23  Aligned_cols=22  Identities=14%  Similarity=-0.094  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHhhCceeEeecC
Q 037955          400 CIEGLKMLAESLFGVTFHSVPL  421 (733)
Q Consensus       400 vl~gl~~l~~~lfgi~~~~~~~  421 (733)
                      ++...+...+++=+|+|++++.
T Consensus       104 ~i~~Af~~Ws~vt~L~F~ev~~  125 (479)
T 1k7i_A          104 QAKLSLQSWSDVANLTFTEVTG  125 (479)
T ss_dssp             HHHHHHHHHHTTBSEEEEECCT
T ss_pred             HHHHHHHHHhcccceeEEEeCC
Confidence            3455666777888899999863


No 44 
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=37.26  E-value=11  Score=36.22  Aligned_cols=14  Identities=43%  Similarity=0.619  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       137 ~~a~~~AHElGH~l  150 (203)
T 1kuf_A          137 MVAVTMTHELGHNL  150 (203)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHhhhhc
Confidence            46789999999986


No 45 
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=37.00  E-value=12  Score=36.11  Aligned_cols=14  Identities=43%  Similarity=0.520  Sum_probs=11.9

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       135 ~~a~~~AHElGHnl  148 (202)
T 1atl_A          135 LMGVTMAHELGHNL  148 (202)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             eeEEEehhhhcccc
Confidence            45689999999986


No 46 
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=36.82  E-value=12  Score=36.08  Aligned_cols=14  Identities=36%  Similarity=0.541  Sum_probs=12.0

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       134 ~~a~~~AHElGH~l  147 (202)
T 1yp1_A          134 LMAVVMAHELGHNL  147 (202)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            35789999999987


No 47 
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=36.71  E-value=12  Score=36.48  Aligned_cols=14  Identities=50%  Similarity=0.719  Sum_probs=12.0

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       140 ~~a~~~AHElGHnl  153 (217)
T 3b8z_A          140 HAAFTVAHEIGHLL  153 (217)
T ss_dssp             SHHHHHHHHHHHHT
T ss_pred             chhhhhHhhhhhhc
Confidence            35789999999986


No 48 
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=36.56  E-value=12  Score=35.01  Aligned_cols=23  Identities=4%  Similarity=-0.003  Sum_probs=16.8

Q ss_pred             HHHHHHHHHHHHhhCceeEeecC
Q 037955          399 QCIEGLKMLAESLFGVTFHSVPL  421 (733)
Q Consensus       399 ~vl~gl~~l~~~lfgi~~~~~~~  421 (733)
                      .++...+..-+++-+|+|+++..
T Consensus        33 ~ai~~A~~~Ws~vt~L~F~ev~~   55 (168)
T 830c_A           33 KAFKKAFKVWSDVTPLNFTRLHD   55 (168)
T ss_dssp             HHHHHHHHHHHTTSSCEEEEESS
T ss_pred             HHHHHHHHHHHhccCcceeeccC
Confidence            34556667777888899999863


No 49 
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=34.54  E-value=14  Score=35.14  Aligned_cols=24  Identities=25%  Similarity=0.188  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHHHHHhhCceeEeec
Q 037955          397 LGQCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       397 l~~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      +..++...|.+-+++=+++|++++
T Consensus        29 v~~ai~~Af~~Ws~vt~L~F~ev~   52 (181)
T 3ma2_D           29 TYEAIRKAFRVWESATPLRFREVP   52 (181)
T ss_dssp             HHHHHHHHHHHHHHHSSCEEEECC
T ss_pred             HHHHHHHHHHHHHhcCCcceEEcc
Confidence            344566667777788899999985


No 50 
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=34.28  E-value=1e+02  Score=34.58  Aligned_cols=169  Identities=18%  Similarity=0.157  Sum_probs=85.8

Q ss_pred             ChhhHHHHHHHH--HHHHHHhhhc---CCCCccCCCcccchhhhhhHHHHHHhhhcHHHHH-HHHhcccCCCCChHHHHH
Q 037955          499 NHHEVETLFHEF--GHALHSLLSR---TDYQHFSGTRVALDFAETPSNLFEYYAWDYRVLR-RFAKHYLTGEIVPEKLVK  572 (733)
Q Consensus       499 ~~~~v~TLfHEf--GHalH~lls~---~~~~~~sgt~~~~D~~E~pS~~~E~~~~~~~~L~-~~s~h~~tge~lp~~l~~  572 (733)
                      ++....|++||-  ||-++..++.   ...+.+-  +.    .=..|-+.|=|+.-.+.|- .+ ..+    .-|...+-
T Consensus       379 ~~~~~~~~~HE~~PGHhlQ~~~~~~~~~~~~~~r--r~----~~~~~~~~EGWAlYaE~l~~e~-G~~----~dp~~~~g  447 (562)
T 3iuk_A          379 TWSETTTVFHEGVPGHHLQVATATYRRELLNNWR--RN----VCWVSGHGEGWALYAEQLMLEL-GYL----KDPGDHMG  447 (562)
T ss_dssp             CTTTHHHHHHHSTTTHHHHHHHHHHTGGGSCHHH--HH----TCCCHHHHHHHHHHHHHHHHHT-TTT----CSHHHHHH
T ss_pred             chhHHHHHHHhcCCcHHHHHHHHHHhccCCCHHH--Hh----ccccCcccChHHHHHHHHHHHc-CCC----CChHHHHH
Confidence            345678999994  9988876542   1111110  00    0012444555554433221 11 111    12555444


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHHhHHHhhcCCCC------CCCCHHHHHHHHHhhccCCCCCCCCcccccccccccccccc
Q 037955          573 SMQGARDMFAATELQRQIFYALVDQTLFGERLG------QTRDTSSIVADMKRQHTSWNHVEGTHWHIRFSHFINYGAGY  646 (733)
Q Consensus       573 ~l~~~~~~~~~~~~~~ql~~a~fD~~lh~~~~~------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~f~Hl~~Y~a~Y  646 (733)
                      .|..         .+...+...+|.-+|...+.      ..-+..+.. +...+..++....-.   .-..-++++++.+
T Consensus       448 ~L~~---------~l~ra~R~vvD~glH~~~~~p~~~~~~~wt~e~a~-~~l~~~~~~~~~~a~---~ev~Ry~~~Pgqa  514 (562)
T 3iuk_A          448 MLDG---------QRMRAARVVFDIGVHLELPVPERWGTGTWTPEKGF-DFLKANLDISEGQLQ---FEFTRYLGWPGQA  514 (562)
T ss_dssp             HHHH---------HHHHHHHHHHHHHHHHTCBCCTTTCSSBCCHHHHH-HHHHHHCCCCHHHHH---HHHHHHHHSTTST
T ss_pred             HHHH---------HHHHHHHHHHHhhccccCCCcccccCCCCCHHHHH-HHHHHhcCCChHHHH---HHHHHHHcCCcHH
Confidence            4421         12234567889999974210      122233333 333343332211100   0011123567777


Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHhcCCCCCCHHHHHHHh
Q 037955          647 YSYLYAKCFAATIWQKLCQE-DPLSLTTGTTLRTKILQHGGAKEPADMLNDL  697 (733)
Q Consensus       647 YsYl~s~v~A~di~~~~~~~-~~~~~~~G~~~r~~vL~~Ggs~~~~ell~~f  697 (733)
                      -+|.+|+..=.++-....+. | |+.   +.|-+.||+.|+.  |.+++++.
T Consensus       515 ~sY~~G~~~i~~lR~~a~~~lG-fdl---k~FHd~vL~~G~~--Pl~~l~~~  560 (562)
T 3iuk_A          515 PSYKVGQRLWEQIRAELESREG-FDL---KSFHSKALNIGSV--GLDVLRRA  560 (562)
T ss_dssp             THHHHHHHHHHHHHHHHHTSTT-CCH---HHHHHHHHTTCSC--CHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHcC-CCH---HHHHHHHHhCCCC--CHHHHHHH
Confidence            79999998877777666554 5 874   7888889998743  56666653


No 51 
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=32.97  E-value=14  Score=37.85  Aligned_cols=14  Identities=36%  Similarity=0.539  Sum_probs=12.3

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       142 ~~a~t~AHElGHnl  155 (300)
T 2v4b_A          142 QAAFTTAHELGHVF  155 (300)
T ss_dssp             THHHHHHHHHHHHT
T ss_pred             cceehhhhhhhhhc
Confidence            46799999999987


No 52 
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=32.81  E-value=16  Score=35.25  Aligned_cols=17  Identities=29%  Similarity=0.186  Sum_probs=13.5

Q ss_pred             hHHHHHHHHHHHHHHhh
Q 037955          502 EVETLFHEFGHALHSLL  518 (733)
Q Consensus       502 ~v~TLfHEfGHalH~ll  518 (733)
                      ..-|+.|||||||=..-
T Consensus        93 ~~g~i~HEl~HaLGf~H  109 (199)
T 3lqb_A           93 YSGIAQHELNHALGFYH  109 (199)
T ss_dssp             SHHHHHHHHHHHHTCCC
T ss_pred             ccchHHHHHHHHhccce
Confidence            46899999999985443


No 53 
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.61  E-value=16  Score=31.31  Aligned_cols=18  Identities=33%  Similarity=0.486  Sum_probs=13.3

Q ss_pred             ChhhHH-HHHHHHHHHHHH
Q 037955          499 NHHEVE-TLFHEFGHALHS  516 (733)
Q Consensus       499 ~~~~v~-TLfHEfGHalH~  516 (733)
                      +.+++. .|.||+||..|.
T Consensus        79 ~~~El~aVlaHElgH~~~~   97 (107)
T 3cqb_A           79 TRDEAEAVLAHEVSHIANG   97 (107)
T ss_dssp             CHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHCC
Confidence            345654 679999999874


No 54 
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=31.69  E-value=16  Score=36.57  Aligned_cols=13  Identities=31%  Similarity=0.429  Sum_probs=11.4

Q ss_pred             hHHHHHHHHHHHH
Q 037955          502 EVETLFHEFGHAL  514 (733)
Q Consensus       502 ~v~TLfHEfGHal  514 (733)
                      ...|++||+||.+
T Consensus       182 ~a~~~AHElGHnl  194 (257)
T 2ddf_A          182 ADLVTTHELGHNF  194 (257)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             eeeeeeeehhhhc
Confidence            5689999999986


No 55 
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=31.47  E-value=16  Score=35.46  Aligned_cols=14  Identities=43%  Similarity=0.714  Sum_probs=12.0

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.+
T Consensus       135 ~~a~~~AHElGHnl  148 (214)
T 1r55_A          135 GAAATMAHEIGHSL  148 (214)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            35799999999987


No 56 
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=29.89  E-value=17  Score=37.55  Aligned_cols=14  Identities=29%  Similarity=0.501  Sum_probs=12.4

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       142 ~~a~t~AHElGHnl  155 (316)
T 2rjp_A          142 QSAFTAAHQLGHVF  155 (316)
T ss_dssp             THHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHhhc
Confidence            46889999999987


No 57 
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=29.78  E-value=17  Score=36.68  Aligned_cols=15  Identities=40%  Similarity=0.503  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHALH  515 (733)
Q Consensus       501 ~~v~TLfHEfGHalH  515 (733)
                      +.-.||.||+||-|-
T Consensus       161 n~g~TltHEvGH~LG  175 (262)
T 2cki_A          161 DKGRTATHEIGHWLN  175 (262)
T ss_dssp             CSSHHHHHHHHHHTT
T ss_pred             cccchhhhhhhhhhc
Confidence            446899999999763


No 58 
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=28.96  E-value=18  Score=38.41  Aligned_cols=14  Identities=50%  Similarity=0.719  Sum_probs=12.2

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       142 ~~a~~~AHElGHnl  155 (378)
T 2rjq_A          142 HAAFTVAHEIGHLL  155 (378)
T ss_dssp             THHHHHHHHHHHHT
T ss_pred             chhhhhhhhhhhhc
Confidence            36789999999987


No 59 
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=27.28  E-value=21  Score=34.43  Aligned_cols=12  Identities=50%  Similarity=0.767  Sum_probs=10.1

Q ss_pred             HHHHHHHHHHHH
Q 037955          503 VETLFHEFGHAL  514 (733)
Q Consensus       503 v~TLfHEfGHal  514 (733)
                      ..|++||+||.+
T Consensus       134 a~~~AHElGH~l  145 (208)
T 4dd8_A          134 ACTMAHEMGHNL  145 (208)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc
Confidence            379999999964


No 60 
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=26.46  E-value=22  Score=36.21  Aligned_cols=13  Identities=31%  Similarity=0.429  Sum_probs=11.6

Q ss_pred             hHHHHHHHHHHHH
Q 037955          502 EVETLFHEFGHAL  514 (733)
Q Consensus       502 ~v~TLfHEfGHal  514 (733)
                      ...|++||+||.+
T Consensus       188 ~a~~~AHElGHnl  200 (288)
T 2i47_A          188 ADLVTTHELGHNF  200 (288)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhc
Confidence            5789999999986


No 61 
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=25.81  E-value=23  Score=38.30  Aligned_cols=15  Identities=47%  Similarity=0.556  Sum_probs=12.6

Q ss_pred             hhHHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHALH  515 (733)
Q Consensus       501 ~~v~TLfHEfGHalH  515 (733)
                      +-+.+..|||||+|=
T Consensus       375 ~l~~Va~HE~GHaLG  389 (425)
T 1l6j_A          375 SLFLVAAHEFGHALG  389 (425)
T ss_dssp             EHHHHHHHHHHHHTT
T ss_pred             cchhhhhhhhhhhcc
Confidence            557899999999984


No 62 
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=25.66  E-value=23  Score=38.45  Aligned_cols=14  Identities=36%  Similarity=0.529  Sum_probs=12.0

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       145 ~~a~t~AHElGHnl  158 (427)
T 2ero_A          145 LVAIAMAHEMGHNL  158 (427)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            45689999999986


No 63 
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=25.59  E-value=23  Score=38.17  Aligned_cols=15  Identities=33%  Similarity=0.487  Sum_probs=12.5

Q ss_pred             hhHHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHALH  515 (733)
Q Consensus       501 ~~v~TLfHEfGHalH  515 (733)
                      +-..+..|||||+|=
T Consensus       365 ~l~~va~HE~GHaLG  379 (421)
T 1eak_A          365 SLFLVAAHQFGHAMG  379 (421)
T ss_dssp             EHHHHHHHHHHHHTT
T ss_pred             cchhhhhhhhhhccC
Confidence            446799999999985


No 64 
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=24.94  E-value=24  Score=38.17  Aligned_cols=14  Identities=36%  Similarity=0.517  Sum_probs=12.1

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       136 ~~a~t~AHElGHnl  149 (419)
T 2dw0_A          136 VVAVIMAHEMGHNL  149 (419)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             hhhhhHHHHHHHHc
Confidence            45789999999987


No 65 
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=24.49  E-value=27  Score=36.92  Aligned_cols=23  Identities=9%  Similarity=0.075  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHHHhhCceeEeec
Q 037955          398 GQCIEGLKMLAESLFGVTFHSVP  420 (733)
Q Consensus       398 ~~vl~gl~~l~~~lfgi~~~~~~  420 (733)
                      ..++...+..-+++-+|+|+++.
T Consensus        26 ~~~i~~A~~~W~~vt~l~F~ev~   48 (365)
T 3ba0_A           26 DYAIRKAFQVWSNVTPLKFSKIN   48 (365)
T ss_dssp             HHHHHHHHHHHHTTSSCCEEECS
T ss_pred             HHHHHHHHHHHhcccCeeEEEec
Confidence            34455566667778889999885


No 66 
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=24.45  E-value=32  Score=36.01  Aligned_cols=27  Identities=11%  Similarity=0.149  Sum_probs=20.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhcCCCCccC
Q 037955          501 HEVETLFHEFGHALHSLLSRTDYQHFS  527 (733)
Q Consensus       501 ~~v~TLfHEfGHalH~lls~~~~~~~s  527 (733)
                      .++....||++|++..-.+.-.|+.-+
T Consensus       155 ~~lDVv~HEltHGVt~~~agL~Y~~eS  181 (341)
T 2vqx_A          155 IAIDVVGHALAHGVTESEAGLIYFQQA  181 (341)
T ss_dssp             SCHHHHHHHHHHHHHHHTTCCCSSHHH
T ss_pred             cchhhhhhhcccceecccCCccccCCC
Confidence            367888999999999888765554333


No 67 
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=24.12  E-value=31  Score=33.83  Aligned_cols=18  Identities=28%  Similarity=0.405  Sum_probs=13.2

Q ss_pred             hHHHHHHHHHHHHHHhhh
Q 037955          502 EVETLFHEFGHALHSLLS  519 (733)
Q Consensus       502 ~v~TLfHEfGHalH~lls  519 (733)
                      =+..++||+||++=....
T Consensus        48 ~~~v~~HElgH~~~A~~~   65 (224)
T 3b4r_A           48 FVSVVLHELGHSYVAKKY   65 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc
Confidence            345678999999875544


No 68 
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=23.94  E-value=36  Score=30.33  Aligned_cols=20  Identities=50%  Similarity=0.722  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHhhhcCC
Q 037955          503 VETLFHEFGHALHSLLSRTD  522 (733)
Q Consensus       503 v~TLfHEfGHalH~lls~~~  522 (733)
                      -.|+.||+||-+.++-....
T Consensus        90 ~~tvvHEiaHhfe~lag~~g  109 (130)
T 2ejq_A           90 WETMLHELRHHLESLAGRDD  109 (130)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-
T ss_pred             HHHHHHHhHHHHHhhcccCC
Confidence            36899999999988766543


No 69 
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=23.12  E-value=23  Score=38.35  Aligned_cols=14  Identities=29%  Similarity=0.484  Sum_probs=11.8

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       138 ~~a~t~AHElGHnl  151 (427)
T 2e3x_A          138 KTAVIMAHELSHNL  151 (427)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             eeeeehHHHHHHhh
Confidence            44689999999986


No 70 
>2qn0_A Neurotoxin; botulism, snares, protease; 1.75A {Clostridium botulinum} PDB: 3deb_A
Probab=21.95  E-value=42  Score=35.41  Aligned_cols=22  Identities=32%  Similarity=0.519  Sum_probs=18.7

Q ss_pred             ChhhHHHHHHHHHHHHHHhhhc
Q 037955          499 NHHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       499 ~~~~v~TLfHEfGHalH~lls~  520 (733)
                      --|=..+|+||+=|+||.|.+-
T Consensus       220 ~~DPAl~LmHELIHsLH~LYGi  241 (430)
T 2qn0_A          220 CMDPILILMHELNHAMHNLYGI  241 (430)
T ss_dssp             ECCHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCHHHHHHHHHHHHHHhhccc
Confidence            3467899999999999999763


No 71 
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=21.70  E-value=2.4e+02  Score=24.79  Aligned_cols=26  Identities=15%  Similarity=0.248  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHH
Q 037955          126 KASMRISEYLHYLNTNHTLYDAVKKA  151 (733)
Q Consensus       126 ~~~~~l~~~~~~l~~~~~Ly~~l~~~  151 (733)
                      ...+.+...+..+.+-+-||.-+|.+
T Consensus        13 ~~~~~~~~mMqqL~SKevLYepmKel   38 (126)
T 2wl8_A           13 NILPIMQSIMQNLLSKDVLYPSLKEI   38 (126)
T ss_dssp             -CHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhHHhhhccHHHH
Confidence            34566777888888889999999987


No 72 
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=21.46  E-value=31  Score=37.00  Aligned_cols=14  Identities=43%  Similarity=0.655  Sum_probs=11.8

Q ss_pred             hhHHHHHHHHHHHH
Q 037955          501 HEVETLFHEFGHAL  514 (733)
Q Consensus       501 ~~v~TLfHEfGHal  514 (733)
                      .-..|++||+||.|
T Consensus       138 ~~a~t~AHElGHnl  151 (397)
T 3k7n_A          138 LVASTITHELGHNL  151 (397)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             hhhhhHHHHHHHHc
Confidence            46789999999975


No 73 
>3bon_A Neurotoxin A; metalloprotease; 1.20A {Clostridium botulinum} SCOP: d.92.1.7 PDB: 3bok_A 3boo_A 2ilp_A* 2ima_A* 2imb_A* 2imc_A 2w2d_A 3c8b_A 3bwi_A 3c88_A 3c89_A 3c8a_A 3qiz_A* 3qix_A* 3qiy_A* 3qj0_A* 3dda_A 3ddb_A 3qw5_A* 3qw6_A ...
Probab=20.90  E-value=46  Score=35.10  Aligned_cols=21  Identities=38%  Similarity=0.333  Sum_probs=18.3

Q ss_pred             hhhHHHHHHHHHHHHHHhhhc
Q 037955          500 HHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       500 ~~~v~TLfHEfGHalH~lls~  520 (733)
                      -|=+.+|+||+=|+||.|.+-
T Consensus       215 ~DPAl~LmHELIH~LH~LYGi  235 (425)
T 3bon_A          215 TDPAVTLAHELIHAGHRLYGI  235 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC
T ss_pred             cCHHHHHHHHHHHHHHhhccc
Confidence            467899999999999999763


No 74 
>2fpq_A Botulinum neurotoxin D light chain; hexxh metalloprotease; 1.65A {Clostridium botulinum}
Probab=20.84  E-value=46  Score=35.29  Aligned_cols=21  Identities=38%  Similarity=0.561  Sum_probs=18.4

Q ss_pred             hhhHHHHHHHHHHHHHHhhhc
Q 037955          500 HHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       500 ~~~v~TLfHEfGHalH~lls~  520 (733)
                      -|=+.+|+||+=|+||.|..-
T Consensus       229 ~DPAl~LmHELIHsLH~LYGi  249 (444)
T 2fpq_A          229 MDPVIALMHELTHSLHQLYGI  249 (444)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC
T ss_pred             cCHHHHHHHHHHHHHHhhccc
Confidence            467899999999999999874


No 75 
>2zrr_A Mundticin KS immunity protein; antiparallel four-helix bundle, antimicrobial protein; 1.80A {Enterococcus mundtii}
Probab=20.77  E-value=3.7e+02  Score=23.28  Aligned_cols=68  Identities=19%  Similarity=0.257  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHhhC---CHHHHHHHHHHh----hcCCCCCHH--HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 037955          124 ASKASMRISEYLHYLNT---NHTLYDAVKKAE----LDGHLLSKE--AHRAANHLRIDFEKGGIHLCADKLDRVNQLNM  193 (733)
Q Consensus       124 a~~~~~~l~~~~~~l~~---~~~Ly~~l~~~~----~~~~~L~~e--~~r~l~~~~~~f~~~G~~L~~~~r~~~~~l~~  193 (733)
                      .++|...|.+....++.   +.+|.+.+....    +.+... |=  .+=-++ +-+-++.+++.|++++-+.+++|.+
T Consensus        34 ~~~Ai~II~~Ll~~l~~~~~~~~Lk~vL~~Y~~ELk~~~tSv-PfILSRMNld-IS~vL~~n~I~LS~~qs~~LK~Lr~  110 (118)
T 2zrr_A           34 RKKAEVIITELLDDLEIDLGNESLRKVLGSYLKKLKNEGTSV-PLVLSRMNIE-ISNAIKKDGVSLNENQSKKLKELMS  110 (118)
T ss_dssp             HHHHHHHHHHHHHHHCSCSSSHHHHHHHHHHHHHHHHCCSCH-HHHHHHHHHH-HHHHHTTTTCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHhcCCCCc-hhHHHHhhHH-HHHHHHHCCcccCHHHHHHHHHHHH
Confidence            45667777777777764   677888777652    122110 10  111111 2245677999999998888887764


No 76 
>2a97_A BONT/F, botulinum neurotoxin type F, bontoxilysin F; clostridium botulinum neurotoxin serotype F, light chain, catalytic domain, X-RAY,; 1.80A {Clostridium botulinum} PDB: 2a8a_A 3fie_A 3fii_A
Probab=20.68  E-value=46  Score=35.20  Aligned_cols=22  Identities=36%  Similarity=0.404  Sum_probs=18.8

Q ss_pred             ChhhHHHHHHHHHHHHHHhhhc
Q 037955          499 NHHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       499 ~~~~v~TLfHEfGHalH~lls~  520 (733)
                      =-|=+.+|+||+=|+||.|.+-
T Consensus       218 ~~DPAl~LmheLIh~Lh~LYGi  239 (439)
T 2a97_A          218 IADPAISLAHELIHALHGLYGA  239 (439)
T ss_dssp             ECCHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCHHHHHHHHHHHHHHHhccc
Confidence            3467899999999999999764


No 77 
>1e1h_A BONT/A LC, botulinum neurotoxin type A light chain; Zn-endopeptidase, complex, substrate bound, inhibitor bound, hydrolase; 1.80A {Clostridium botulinum} SCOP: d.92.1.7
Probab=20.30  E-value=50  Score=32.82  Aligned_cols=21  Identities=38%  Similarity=0.358  Sum_probs=18.2

Q ss_pred             hhhHHHHHHHHHHHHHHhhhc
Q 037955          500 HHEVETLFHEFGHALHSLLSR  520 (733)
Q Consensus       500 ~~~v~TLfHEfGHalH~lls~  520 (733)
                      -|=..+|+||+=|+||.|..-
T Consensus       252 ~DPAL~LmHELIH~LH~LYGI  272 (287)
T 1e1h_A          252 TDPAVTLAHELIHAEHRLYGI  272 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC
T ss_pred             cCHHHHHHHHHHHHHHhhcCc
Confidence            367899999999999999763


No 78 
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=20.05  E-value=27  Score=37.34  Aligned_cols=16  Identities=38%  Similarity=0.704  Sum_probs=13.6

Q ss_pred             HHHHHHHHHHHHHHhh
Q 037955          503 VETLFHEFGHALHSLL  518 (733)
Q Consensus       503 v~TLfHEfGHalH~ll  518 (733)
                      ..++.|||||++-.|-
T Consensus       288 ~~V~vHE~GHsfggLa  303 (407)
T 3p1v_A          288 KPVVVHEFGHSFGGLA  303 (407)
T ss_dssp             HHHHHHHHHHHTTCCC
T ss_pred             cceeeeeccccccccc
Confidence            5799999999997764


No 79 
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=20.02  E-value=38  Score=34.73  Aligned_cols=23  Identities=17%  Similarity=0.391  Sum_probs=18.3

Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCC
Q 037955          502 EVETLFHEFGHALHSLLSRTDYQ  524 (733)
Q Consensus       502 ~v~TLfHEfGHalH~lls~~~~~  524 (733)
                      ++....||++|++..-.+.-.|+
T Consensus       138 ~lDVv~HE~tHGVt~~~agl~y~  160 (301)
T 1bqb_A          138 ANDVVAHEITHGVTQQTANLEYK  160 (301)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             ccceeeeecccceecccCCCccc
Confidence            67788999999999887654443


Done!