BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037957
(841 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XVJ4|FAN1_ARATH Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana
GN=At1g48360 PE=2 SV=2
Length = 891
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/872 (55%), Positives = 597/872 (68%), Gaps = 66/872 (7%)
Query: 1 MLTGRDSLNRLIGKRRRYLPNRESLLSAPIQVTL---------LNELLLDAC-------- 43
MLTGR+SL RLIGKRRR+LPNR LLSA +L L L D C
Sbjct: 1 MLTGRESLLRLIGKRRRFLPNRHLLLSAHTPNSLNLEFNDYGNLVSLAGDDCRLSEDPTS 60
Query: 44 ------------LARGTKRKLTQRTLLQLNFSAQTQDQNHSNETKLSTTNVFSEGPVESL 91
L+ KR+LTQ TLLQ +F LS +G V
Sbjct: 61 SDDPSKFSDDLSLSTRKKRRLTQTTLLQSSF--------------LSVPKQLEDGLVICT 106
Query: 92 EQNSICGLANYVAVEDYNSNHWRSTENTTSHQRINCDEKTPLSSPHINGPEHDVNVTVDG 151
+Q SI D + + + + + I C + SP + E VT+D
Sbjct: 107 QQKSIL---------DSETFEFSLVQRSEPSESICCKVEDGSCSP--SREESLKTVTLDE 155
Query: 152 MSEATLRTFIVGRRYSDEKEIKIGAHISLSRDPNNVKDPNAIKVFSADSGCCKVLGYLPK 211
+ + TFIVGR++SD ++++IG I L R P NVKD NAIKV S DS ++LGYLPK
Sbjct: 156 DNGEAIETFIVGRKFSDVQDLEIGGDIFLLRHPENVKDRNAIKVISGDS---EMLGYLPK 212
Query: 212 ELSEYLSPLMEKYSLSFEGFVISAPKHSLDVVQIKITYHKIESDNENDDDIEVS-TCLWK 270
++S+ LSPL++ Y L FEG + S PK S + V IK+ HK+ SD + ++ LW+
Sbjct: 213 DISQCLSPLIDDYDLKFEGTITSVPKKSSEAVLIKVVCHKMRSDGWKECELYGDFKPLWE 272
Query: 271 RALHVARSAKGYPSSMIKYQCNFNLLIQEVLGNSRHLFKADEIDFLESFSMLSEDSQRLF 330
+ L V +P +YQ NFN+L+QEVL + HLF ADE FLESF LSEDSQRLF
Sbjct: 273 KVLQVVEHQMQFPPKTTRYQLNFNVLLQEVLRSCSHLFTADEKAFLESFPTLSEDSQRLF 332
Query: 331 VRLYMRKGPWFRLSNISYPEVSNSREAVRELIDNGYICSSEDTNEL-HDAIKDICNLLTV 389
+RLY RKGPWFRLSNISYPEV++S +A+++L G++ S +D NEL + +K+I LL V
Sbjct: 333 IRLYTRKGPWFRLSNISYPEVTDSLQALKDLTVRGFMSSVKDANELDNQKMKEITELLNV 392
Query: 390 SELREISCVLQNCHRGSRKQKVIASLLCFYEDGICPFLPKMILDRTGLCIRVASKAEHLI 449
+ELR+I + + R SRK+ +I SL Y DG L +IL+RTGLC +V+S AE LI
Sbjct: 393 TELRDILSMNKVFSRTSRKRDLINSLCSCYNDGTRINLATVILERTGLCAKVSSTAESLI 452
Query: 450 WRAERLFFLNGEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAYEEAIELAQIMD 509
WR ERLFFLNGEQDLS+F+L+DLGI+KYPTY CI +EQIFS LLAYEEAIE+AQ+MD
Sbjct: 453 WRVERLFFLNGEQDLSSFVLLDLGIIKYPTYKCIDSEQIFSNRTKLLAYEEAIEVAQLMD 512
Query: 510 QSLDENNIELVLRCIMIAESRMSSSSCKAVQSITSELANTFHSCFSASWVYSKVVLLGIS 569
+SLD + + VL+CI+IAE+R+SSS S+ S A F+ F+A WV SKVVLLG+S
Sbjct: 513 ESLDNEDPQTVLKCIIIAETRISSS------SLDSAHAAAFNR-FTAPWVNSKVVLLGVS 565
Query: 570 FLEREQRFNDAINLLRRLLSCFTCDSRRGYWTLRLSIDLEHMGCPSESLSVAEGGLLDSW 629
F E ++R+N A+ LLRRLLSCF CD RRGYWT+RLS DLEHMG P+ESL+VAE GLLD W
Sbjct: 566 FFENQKRYNRAVYLLRRLLSCFNCDGRRGYWTVRLSTDLEHMGRPNESLTVAEQGLLDPW 625
Query: 630 VRAGSRVALQRRVLRLGKPPRRWKIPSFSESIKRKITEIHVQGRPLNCEIGMKSWFYGED 689
VRAGSRVALQRR+LRL KPPRRWK P+FS + KI E+ +QGR LNCE+G+K+ FYGED
Sbjct: 626 VRAGSRVALQRRILRLAKPPRRWKTPTFSNLVDNKIPEVTIQGRSLNCEVGIKNRFYGED 685
Query: 690 GEKCGVEQLALQYYAGEGGGWHGVHTESGIWLTIFGLLMWDILFSDVPDVFRSRFQNAPL 749
GE+CGVEQLALQYY+GEGGGW G+HTES IWLTIFGLLMWDILFSDVP VF++RFQ APL
Sbjct: 686 GEQCGVEQLALQYYSGEGGGWQGIHTESSIWLTIFGLLMWDILFSDVPGVFQTRFQTAPL 745
Query: 750 DLATDSFYIVRKNLIESQLQKIYDGMAEEILITSWESHVGTVCRGVNWDRHSLSELRAAV 809
DL T+SFY+ RK IESQL+K+ +GMAEEILI S+E+ GT CRGV W+R SL ELRAAV
Sbjct: 746 DLETESFYLTRKETIESQLEKVANGMAEEILIISYETQRGTACRGVAWERFSLEELRAAV 805
Query: 810 TCIGGPCLAHLCRHLAQDYGSWSSGMPDLLIW 841
C+GG C+A LCRHLAQDY SW SGMPDLL+W
Sbjct: 806 ACVGGMCIASLCRHLAQDYRSWCSGMPDLLVW 837
>sp|Q5SNL7|FAN1_ORYSJ Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp.
japonica GN=Os06g0171800 PE=3 SV=1
Length = 964
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/915 (47%), Positives = 585/915 (63%), Gaps = 78/915 (8%)
Query: 1 MLTGRDSLNRLIGKRRRY-LPNRESLLSAP------------------------------ 29
MLTGR+SL RLIG+RRR LP +L P
Sbjct: 1 MLTGRESLVRLIGRRRRSPLPAALALAVPPSRSLQDDAADAEREAAAGGSSSGGGDAAGA 60
Query: 30 ---IQVTLLNELL----------LDACLARGTKRKLTQRTLLQLNFSAQTQDQ------N 70
+ + E + LD CL RGTKRKLTQ TLL +FS + D N
Sbjct: 61 AGWVACPVCGESIRGTDYCVNTHLDICLTRGTKRKLTQSTLLDFSFSRKATDDYALNNLN 120
Query: 71 HSNETK---LSTTNVFSEGPVESLEQNSIC--GLANYVAVEDYNSNHWRS---------- 115
S+E + + NV S+G SL + + G AN + + + S
Sbjct: 121 TSDEAEHMEPTDGNVSSDGAFFSLNNDKVNSKGSANASSPGCLHGSPDISETCDTCLPPN 180
Query: 116 -----TENTTSHQRINCDEKTPLSSPHINGPEHDVNV--TVDGMSEATLRTFIVGRRYSD 168
TENT ++ + +K P + + + D + + T IVGRR+ +
Sbjct: 181 VLLPYTENTANNGVV---KKCLSHMPSTDATSSTIGLLSVTDSSNSVVVDTVIVGRRFHE 237
Query: 169 EKEIKIGAHISLSRDPNNVKDPNAIKVFSADSGCCKVLGYLPKELSEYLSPLMEKYSLSF 228
E++ GA I+L RDP N KDP+AIKV A C ++LGYLP+EL++ L+PL++++ +
Sbjct: 238 NIELQEGASITLLRDPQNAKDPDAIKVLYAGYECEQMLGYLPRELAKVLAPLLDRHYIEC 297
Query: 229 EGFVISAPKHSLDVVQIKITYHKIESDNENDDDIEVSTCLWKRALHVARSAKGYPSSMIK 288
EG V+ P+ LD V I++ K +NE DD++ LW+ + + S +
Sbjct: 298 EGCVVGVPEQQLDHVPIQLKCQKYTDENETYDDLKHPQFLWENFICAVGNGNLLQPSSTR 357
Query: 289 YQCNFNLLIQEVLGNSRHLFKADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNISY 348
YQ NF+ +I +V+ N HLF E FL+SF +L +D QRLFVR+Y RKGPWFR+S+ISY
Sbjct: 358 YQTNFSSMITDVMANHSHLFSDKEKSFLDSFQLLPDDGQRLFVRIYTRKGPWFRMSSISY 417
Query: 349 PEVSNSREAVRELIDNGYICSSEDTNELHD-AIKDICNLLTVSELREISCVLQ-NCHRGS 406
E+S+ +A EL GYI ++L + +K++ ++L+V E++EI LQ N +
Sbjct: 418 REISDLGQAAMELKLAGYIDMISCMDDLSNYDLKEVIDVLSVPEMKEILKELQKNNVSCT 477
Query: 407 RKQKVIASLLCFYEDGICPFLPKMILDRTGLCIRVASKAEHLIWRAERLFFLNGEQDLSA 466
R+ +++++LL Y +G C LPK IL TG CIR + A+ L+WR +RLFFLNG+QDLS
Sbjct: 478 RRHELLSTLLYLYRNGTCTILPKRILKWTGTCIRTSDVADELLWRVQRLFFLNGDQDLSF 537
Query: 467 FLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAYEEAIELAQIMDQSLDENNIELVLRCIMI 526
FLLVDLG+V++P Y C I+ ++F + DLL YEEAI++AQ+MDQSLD +N+E+V RCI +
Sbjct: 538 FLLVDLGLVRFPVYACTISHRVFQEISDLLQYEEAIQVAQVMDQSLDNSNMEMVTRCIEL 597
Query: 527 AESRMSSSSCKAVQSITSELANTFHSCFSASWVYSKVVLLGISFLEREQRFNDAINLLRR 586
+E+R+S++ K + +E +F S FSAS VYSK++ LG+S ER++R+ DAI +L+R
Sbjct: 598 SENRLSTAP-KEENATRAEPPPSFFSRFSASSVYSKILTLGVSVYERDRRYTDAIRVLKR 656
Query: 587 LLSCFTCDSRRGYWTLRLSIDLEHMGCPSESLSVAEGGLLDSWVRAGSRVALQRRVLRLG 646
LLS D +RGYW LRLS+DLEHM +ESLS+AE G++D WVRAGS++ALQRRV+RL
Sbjct: 657 LLSTVASDRKRGYWALRLSVDLEHMNRSNESLSIAEAGVIDPWVRAGSKIALQRRVVRLS 716
Query: 647 KPPRRWKIPSFSESIKRKITEIHVQGRPLNCEIGMKSWFYGEDGEKCGVEQLALQYYAGE 706
KPPRRWK+PS++ ++ I E++++GRPLNCE G K+ FYG DGE CGVEQLALQYYA E
Sbjct: 717 KPPRRWKVPSYANAVTTNIKEVNIEGRPLNCETGAKNVFYGYDGELCGVEQLALQYYADE 776
Query: 707 GGGWHGVHTESGIWLTIFGLLMWDILFSDVPDVFRSRFQNAPLDLATDSFYIVRKNLIES 766
GGGW G H+E GIW+TIFGLLMWD +FSDVPDVF+++FQ APLDL TD FY RK+LIES
Sbjct: 777 GGGWRGTHSEGGIWMTIFGLLMWDAIFSDVPDVFQTKFQTAPLDLETDEFYRSRKDLIES 836
Query: 767 QLQKIYDGMAEEILITSWESHVGTVCRGVNWDRHSLSELRAAVTCIGGPCLAHLCRHLAQ 826
QL+KI DG+AEEILI+SWE H GT CRGVNWDRHSL++LRAAV C GG LA L RHLA
Sbjct: 837 QLKKIQDGIAEEILISSWELHQGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLAL 896
Query: 827 DYGSWSSGMPDLLIW 841
DY SWSSGMPDLL+W
Sbjct: 897 DYRSWSSGMPDLLLW 911
>sp|Q69ZT1|FAN1_MOUSE Fanconi-associated nuclease 1 OS=Mus musculus GN=Fan1 PE=2 SV=2
Length = 1020
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 299/601 (49%), Gaps = 59/601 (9%)
Query: 289 YQCNFNLLIQEVLGNSR--HLFKADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNI 346
Y +F +++Q +LGN LF E + F LS Q+L+VRL+ RK W ++S +
Sbjct: 378 YLRSFLVVLQALLGNEEDMKLFDEQEKAIITRFYQLSASGQKLYVRLFQRKLTWIKMSKL 437
Query: 347 SYPEV-SNSREAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSELREISCVLQNCHRG 405
Y E+ S+ V EL D+G++ + + EL D+ LL+ EL+ ++ G
Sbjct: 438 EYEEIASDLTPVVEELKDSGFLQTESELQEL----SDVLELLSAPELKALAKTFHLVSPG 493
Query: 406 SRKQKVIASL--------LCFY---EDGICPFLPKMILDRTGLCIRVASKAEHLIWRAER 454
+KQ+++ + +C + + GI + K D G +RV + R
Sbjct: 494 GQKQQLVDAFHKLAKQRSVCTWGKTQPGIRAVILKRAKDLAGRSLRVCKGPRAVFARILL 553
Query: 455 LFFLN-----------GEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAYEEAIE 503
LF L G+ LS LLV+LG +++P Y QIF DL+ Y A
Sbjct: 554 LFSLTDSMEDEEAACGGQGQLSTVLLVNLGRMEFPQYTICRKTQIFRDREDLIRYAAAAH 613
Query: 504 LAQIMDQSLDENNIELVLRCIMIAESRMSSSSCKAVQSITS----ELANTFHSCFSASWV 559
+ + ++ N E +R + + ++S S E F CF+ W+
Sbjct: 614 MLSDISAAMASGNWEDAKEL-----ARSAKRDWEQLKSHPSLRYHEALPPFLRCFTVGWI 668
Query: 560 YSKVVLLGISFLEREQRFNDAINLLRRLLSC-FTCDSRRGYWTLRLSIDL-EHMGCPSES 617
Y+++ + LER + +A+ L LLS C RG W RL+++L +H+ E+
Sbjct: 669 YTRISSRAVEVLERLHMYEEAVKELENLLSQKIYCPDSRGRWWDRLALNLHQHLKRLEEA 728
Query: 618 LSVAEGGLLDSWVRAGSRVALQRRVLRLGKPP--RRWK--IPSFSESIKRKITEIHVQGR 673
+ GL D VR G R++L +R +RL + P R++K E + + + GR
Sbjct: 729 IRCIREGLADPHVRTGHRLSLYQRAVRLRESPSCRKYKHLFSRLPEVAVGDVKHVTITGR 788
Query: 674 PLNCEIGM-KSWFYGEDGEK-------CGVEQLALQYYAGEGGGWHGVHTESGIWLTIFG 725
L + GM KS F E G+ C VE+LAL YY + G G+H E + T+ G
Sbjct: 789 -LCPQHGMGKSVFVMESGDGANPTTVLCSVEELALGYYR-QSGFDQGIHGEGSTFSTLCG 846
Query: 726 LLMWDILFSD-VPDVFRSRFQNAPLDLATDSFYIVRKNLIESQLQKIYDGMAEEI---LI 781
LL+WDI+F D +PDVFR+ +Q +PLDL TDSF+ R+ +E++LQ I+ AE + +
Sbjct: 847 LLLWDIIFMDGIPDVFRNAYQASPLDLLTDSFFASREQALEARLQLIHSAPAESLRAWVG 906
Query: 782 TSWESHVGTVCRGVNWDRH-SLSELRAAVTCIGGPCLAHLCRHLAQDYGSWSSGMPDLLI 840
+W++ G V V+WDR SL + + V+C+GGP L+ +CR LA D+ G+PDL++
Sbjct: 907 EAWQAQQGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRRLAADFRHCRGGLPDLVV 966
Query: 841 W 841
W
Sbjct: 967 W 967
>sp|Q1LWH4|FAN1_DANRE Fanconi-associated nuclease 1 OS=Danio rerio GN=fan1 PE=2 SV=2
Length = 988
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 295/615 (47%), Gaps = 56/615 (9%)
Query: 275 VARSAKGYPSSMIKYQCNFNLLIQEVLGN--SRHLFKADEIDFLESFSMLSEDSQRLFVR 332
V ++ P+ + Y NF +++ VL N R LF D+ ++SF LS Q L+VR
Sbjct: 329 VGEGSEQQPTRLPYYLRNFRTVLEAVLENEDDRRLFNEDDFSTIQSFQQLSVPGQMLYVR 388
Query: 333 LYMRKGPWFRLSNISYPEVSNS-REAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSE 391
L+ RK W ++ + Y E+S R V+EL+ G++ + +ELHD + ++ +LL E
Sbjct: 389 LFQRKLKWLQVCKVEYTEISTDLRPVVQELVACGFL---QTESELHD-LHEVLDLLPAPE 444
Query: 392 LREISCVLQNCHRGSRKQKVIASLLCF--------YEDGICPFLPKMILDRTGLCIRVAS 443
LR ++ GS+KQ+++ LL ++ + K G C+R+
Sbjct: 445 LRNLAKTFHLGRGGSQKQQLVEGLLQLGKQRSLFAGQNNTAAVILKRAKQAAGSCVRLCR 504
Query: 444 KAEHLIWRA-----------ERLFFLNGEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGL 492
+ + R E G+ L LLV+ G + +P Y + ++F
Sbjct: 505 SSRVVFSRVLLLFTLTDTLEEEDLASGGQGQLYTILLVNSGRLAFPEYTVHRSARLFKDR 564
Query: 493 CDLLAYEEAIELAQIMDQSLDENNIELV--LRCIMIAESRMSSSSCKAVQSITSELANTF 550
DL+ YE A+ Q + ++ + E L +A + SC E F
Sbjct: 565 DDLIRYETAMRALQEVIAAMQSGSWEDAYDLYTTAMAAWQEIKDSCDLSH---QEQLPVF 621
Query: 551 HSCFSASWVYSKVVLLGISFLEREQRFNDAINLLRRLLS-CFTCDSRRGYWTLRLSIDL- 608
CF+ W Y++++ G+ L+R +R+ DA+ LR LLS C RG W RL+++L
Sbjct: 622 LRCFTVGWTYTRILSRGVEILQRLKRYEDAVEQLRNLLSQSVYCVDSRGRWWDRLALNLQ 681
Query: 609 EHMGCPSESLSVAEGGLLDSWVRAGSRVALQRRVLRLGKPPR----RWKIPSFSESIKRK 664
+H+ +++ GL D R G +++L +R R+ + R + +
Sbjct: 682 QHLKQHEQAIGAIRDGLNDPLARTGHKLSLYQRASRMKESASLKKYRLLLRDLPTVHVQD 741
Query: 665 ITEIHVQGRPLNCEIGM-KSWFY-------GEDGEK-----CGVEQLALQYYAGEGGGWH 711
+T + ++G+ E GM KS F G G + C VE LAL++Y G
Sbjct: 742 VTHVTIRGQLFPHEGGMGKSVFLRAASEDEGSGGGQGTVLMCSVEDLALEHYRTLGFD-Q 800
Query: 712 GVHTESGIWLTIFGLLMWDILFSD-VPDVFRSRFQNAPLDLATDSFYIVRKNLIESQLQK 770
G+H E + T+FGLLMWDI+F D VPDVF + +Q PLDL TD FY R+ IE++ +
Sbjct: 801 GIHGEGSTFSTLFGLLMWDIIFMDGVPDVFLNPYQTCPLDLHTDCFYGSRREAIEARAEM 860
Query: 771 IYDGMAE---EILITSWESHVGTVCRGVNWDRHSL-SELRAAVTCIGGPCLAHLCRHLAQ 826
+ + E +++ W + G VC +NW+R S + ++ V C+GG L+ + +A+
Sbjct: 861 LREASVETLQDLIADVWSTQEGRVCALINWERFSTPQQAQSLVACLGGHFLSGVFLRMAK 920
Query: 827 DYGSWSSGMPDLLIW 841
DY G+PDL++W
Sbjct: 921 DYRHCRGGLPDLVVW 935
>sp|Q9Y2M0|FAN1_HUMAN Fanconi-associated nuclease 1 OS=Homo sapiens GN=FAN1 PE=1 SV=4
Length = 1017
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 293/597 (49%), Gaps = 51/597 (8%)
Query: 289 YQCNFNLLIQEVLGNSRH--LFKADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNI 346
Y +F ++++ VL N LF E + F LS Q+L+VRL+ RK W +++ +
Sbjct: 375 YLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKL 434
Query: 347 SYPEVS-NSREAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSELREISCVLQNCHRG 405
Y E++ + + EL + G++ + + EL + ++ LL+ EL+ ++ +
Sbjct: 435 EYEEIALDLTPVIEELTNAGFLQTESELQELSEVLE----LLSAPELKSLAKTFHLVNPN 490
Query: 406 SRKQKVIASLLCFYED-GIC------PFLPKMILDRT----GLCIRVASKAEHLIWRAER 454
+KQ+++ + L + +C P + +IL R G +R+ + R
Sbjct: 491 GQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRAKALAGQSVRICKGPRAVFSRILL 550
Query: 455 LFFLN-----------GEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAYEEAIE 503
LF L G+ LS LLV+LG +++P+Y IF DL+ Y A
Sbjct: 551 LFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDRDDLIRYAAATH 610
Query: 504 LAQIMDQSLDENNIELVLRCIMIAESRMSSSSCKAVQSITSELANTFHSCFSASWVYSKV 563
+ + ++ N E A+ + +L F CF+ W+Y+++
Sbjct: 611 MLSDISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLP-LFLRCFTVGWIYTRI 669
Query: 564 VLLGISFLEREQRFNDAINLLRRLLSC-FTCDSRRGYWTLRLSIDL-EHMGCPSESLSVA 621
+ + L+R + +A+ L LLS C RG W RL+++L +H+ ++
Sbjct: 670 LSRFVEILQRLHMYEEAVRELESLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCI 729
Query: 622 EGGLLDSWVRAGSRVALQRRVLRLGKPP--RRWK--IPSFSESIKRKITEIHVQGRPLNC 677
GL D VR G R++L +R +RL + P +++K E + + + + GR L
Sbjct: 730 TEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFKHLFQQLPEMAVQDVKHVTITGR-LCP 788
Query: 678 EIGM-KSWFYGEDGEK-------CGVEQLALQYYAGEGGGWHGVHTESGIWLTIFGLLMW 729
+ GM KS F E GE C VE+LAL +Y G G+H E + T++GLL+W
Sbjct: 789 QRGMCKSVFVMEAGEAADPTTVLCSVEELALAHYRRSGFD-QGIHGEGSTFSTLYGLLLW 847
Query: 730 DILFSD-VPDVFRSRFQNAPLDLATDSFYIVRKNLIESQLQKIYDGMAEEI---LITSWE 785
DI+F D +PDVFR+ Q PLDL TDSF+ R+ +E++LQ I+D E + + +W
Sbjct: 848 DIIFMDGIPDVFRNACQAFPLDLCTDSFFTSRRPALEARLQLIHDAPEESLRAWVAATWH 907
Query: 786 SHVGTVCRGVNWDRH-SLSELRAAVTCIGGPCLAHLCRHLAQDYGSWSSGMPDLLIW 841
G V V+WDR SL + + V+C+GGP L+ +CRHLA D+ G+PDL++W
Sbjct: 908 EQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVW 964
>sp|D2HNY3|FAN1_AILME Fanconi-associated nuclease 1 OS=Ailuropoda melanoleuca GN=FAN1
PE=3 SV=2
Length = 1025
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 290/603 (48%), Gaps = 51/603 (8%)
Query: 283 PSSMIKYQCNFNLLIQEVLGN--SRHLFKADEIDFLESFSMLSEDSQRLFVRLYMRKGPW 340
P S Y +F ++++ V N R LF E + + F LS +Q+L+VRL+ RK W
Sbjct: 377 PPSHPYYLRSFLVVLKAVFENEEDRMLFDEHEKEIVTKFYQLSASAQKLYVRLFQRKFSW 436
Query: 341 FRLSNISYPEVS-NSREAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSELREISCVL 399
+++ + Y E++ + + EL G++ + + EL + ++ LL+ EL+ ++
Sbjct: 437 LKMNKLEYEEIAPDLTPVIGELQQAGFLQTESELQELSEVLE----LLSAPELKTLAKTF 492
Query: 400 QNCHRGSRKQKVIASLLCFY-EDGIC------PFLPKMILDRT----GLCIRVASKAEHL 448
+ +KQ+++ + L + +C P + +IL R G +RV +
Sbjct: 493 HLVNPNGQKQQLVDTFLKLAKQPSVCTWGKNQPGIGAVILKRAKGLAGQALRVCKGPRAV 552
Query: 449 IWRAERLFFLN-----------GEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLA 497
R LF L G+ LS LLV+LG +++P Y QIF DL+
Sbjct: 553 FSRVLLLFSLTDSLEDEEAACGGQGQLSTVLLVNLGRMEFPRYTINRKTQIFQDRDDLIR 612
Query: 498 YEEAIELAQIMDQSLDENNIELVLRCIMIAESRMSSSSCKAVQSITSELANTFHSCFSAS 557
Y A + + ++ N + A+S + L F CF+
Sbjct: 613 YAAAAHMLSDISTAMANGNWKEANELSQCAKSDWNKLKSHPSLRYHENLP-LFLRCFTVG 671
Query: 558 WVYSKVVLLGISFLEREQRFNDAINLLRRLLSC-FTCDSRRGYWTLRLSIDL-EHMGCPS 615
W+Y++++ + L+R + +A+ L LLS C RG W RL+++L +H+
Sbjct: 672 WIYTRILSRTVEILQRLHMYEEAVKELESLLSQRVYCPDSRGRWWDRLALNLHQHLKRLE 731
Query: 616 ESLSVAEGGLLDSWVRAGSRVALQRRVLRLGKPPR----RWKIPSFSESIKRKITEIHVQ 671
++ GL D VR G R++L +R LRL + P R E + + +
Sbjct: 732 PAIKCITEGLADPEVRTGHRLSLYQRALRLRESPSCQKYRHLFHQLPEVTVGDVKHVTIT 791
Query: 672 GRPLNCEIGM-KSWFYGEDGEK-------CGVEQLALQYYAGEGGGWHGVHTESGIWLTI 723
GR L + GM KS F E G C VE++AL YY G G+H E + T+
Sbjct: 792 GR-LCPQRGMGKSVFVMEAGGPTAPATVLCSVEEVALAYYRRSGFD-QGIHGEGSTFSTL 849
Query: 724 FGLLMWDILFSD-VPDVFRSRFQNAPLDLATDSFYIVRKNLIESQLQKIYDGMAEEILIT 782
+GLL+WDI+F D +PDVFR+ +Q +PLDL TDSF+ R IE++LQ+I+ AE +
Sbjct: 850 YGLLLWDIIFMDGIPDVFRNAYQASPLDLCTDSFFASRGPAIEARLQRIHSAPAESLRAW 909
Query: 783 SWESHV---GTVCRGVNWDRH-SLSELRAAVTCIGGPCLAHLCRHLAQDYGSWSSGMPDL 838
+ G V V+WDR SL + + V+C+GGP L+ +CR LA D+ G+PDL
Sbjct: 910 VAAAWQAQEGRVASIVSWDRFASLQQAQDLVSCLGGPVLSGVCRRLAADFRHCRGGLPDL 969
Query: 839 LIW 841
++W
Sbjct: 970 VVW 972
>sp|Q9Y804|FAN1_SCHPO Fanconi-associated nuclease 1 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC146.06c PE=3 SV=1
Length = 703
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 174/615 (28%), Positives = 288/615 (46%), Gaps = 67/615 (10%)
Query: 282 YPSSMIKYQCNFNLLIQEVLGNSRHLFKADEIDFLESFSMLSEDSQRLFVRLYMRK-GPW 340
Y + Y F ++ VL H+F DE+ +E+F L D + LFVRL+MRK W
Sbjct: 53 YSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLFVRLFMRKRNKW 112
Query: 341 FRLSNISYPEVSNSREAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSELREISCVLQ 400
FR+ +++YP+ + ++L+ + ED + + + ++I +L++ ELR ++ +
Sbjct: 113 FRVGHLTYPDCKDVIACCKQLVLKNFF---EDESLM--STEEIIEILSLDELRSLARQTK 167
Query: 401 NCHRG-----------SRKQKVI----ASLLCFYEDGIC----PFLPKMILDRTGLCIRV 441
C + S++Q V+ L F G+ FL K +L + C++
Sbjct: 168 VCGKSRSEISKEIIFLSKRQSVLHCNGQQFLSFDAFGVMHKQESFLRKQLLYQCKSCVKP 227
Query: 442 ASKAEHLIWRAERLFF---LNGEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAY 498
L R ++F + EQ L++ +L L YP Y +F+ L Y
Sbjct: 228 KKILVDLFHRINIVYFRSSIYDEQSLTSLILARLNKFSYPNYVLSRTSNVFNCRAQCLEY 287
Query: 499 EEAIELAQ----IMDQSL--DENNIELVLRCIMIAESRMSSSSCKAVQSITSELANT--- 549
E +EL++ I + + D+ +E L S+ + ++ E
Sbjct: 288 VEVLELSKNLVPIFENTAASDKEALEQALNSFFEIYPIWSTYLNEDIREFWVEENRKVDT 347
Query: 550 ----FHSCFSASWVYSKVVLLGISFLEREQRFNDAINLLRRLLS-CFTCDSRRGYWTLRL 604
F F VY+ ++ ++ L + + +L LLS +RG+W R
Sbjct: 348 RLVRFSFSFRPGAVYTYLIHKSLNILAKSRLVEVEHEILDTLLSQNIYLVGKRGHWYNRK 407
Query: 605 SIDLEHMGCPSES----------LSVAEGGLLDSWVRAGSRVALQRRVLRLGKPPRRWKI 654
++ LE+ ++ LS E G+ D + +LQRR++RL K K+
Sbjct: 408 AL-LEYNFKTEDTNVLRYWKTLALSTCENGIEDKYTHLRYYFSLQRRLVRLRKC---LKV 463
Query: 655 PSFSESIKRKI-----TEIHVQG-RPLNCEIGMKSWFYGEDGEKCGVEQLALQYYAGEGG 708
+ +E K+ + + + G R N ++ ++ + + VE+LALQ+Y +
Sbjct: 464 SNTTELKSMKLINNNPSRLFLHGERIHNGDLSNRTVWRSKTNNAITVEELALQHY--QSI 521
Query: 709 GWHGVHTESGIWLTIFGLLMWDILFSDVPDVFRSRFQNAPLDLATDSFYIVRKNLIESQL 768
GW G+H ES I LT+F L WDILF DVP VF+S FQ+APLDL TDSFYI R++ I +L
Sbjct: 522 GWEGIHAESSILLTLFALTFWDILFEDVPGVFQSPFQSAPLDLHTDSFYISRESTIMKRL 581
Query: 769 QKIYDGMAEEILITSW--ESHVGTVCRGVNWDRHSLSELRAAVTCIGGPCLAHLCRHLAQ 826
++I +G A I+ ++ E T C G+NW ++ L V CI LA + L Q
Sbjct: 582 EEIRNGKAGLIIKDNYIREHQRKTFCVGLNWS-YTCEMLLEIVDCINDNGLAQIFLALTQ 640
Query: 827 DYGSWSSGMPDLLIW 841
DY + SSG+PDL +W
Sbjct: 641 DYKNSSSGIPDLCLW 655
>sp|Q55FW8|FAN1_DICDI Fanconi-associated nuclease 1 homolog OS=Dictyostelium discoideum
GN=mtmr15 PE=3 SV=1
Length = 1087
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Query: 695 VEQLALQYYAGEGGGWHGVHTESGIWLTIFGLLMWDILF-SDVPDVFRSRFQNAPLDLAT 753
VE+++L++Y+ + GGW G+H E+ I++T++ L WDI+F S+VP VF+S FQN+PLD +
Sbjct: 879 VEEVSLEHYS-QNGGWEGIHCETSIFITLYVLYFWDIIFDSNVPHVFQSPFQNSPLDFGS 937
Query: 754 DSFYIVRKNLIESQLQKIYDGMAEEILI---TSWESHVGTVCRGVNWDRHSLSELRAAVT 810
D FY RK I+++++++ +++LI SW H G RGVNW SL +L
Sbjct: 938 DEFYFTRKEAIDNRIKRLEHSNYDDLLILLNQSW-LHNGCEARGVNWKSTSLEQLSIISK 996
Query: 811 CIGGPCLAHLCRHLAQDYGSWSSGMPD 837
C+GG +A + R L +D+ S+S GMPD
Sbjct: 997 CLGGKLIAFISRLLTEDFKSFSHGMPD 1023
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 486 EQIFSGLCDLLAYEEAIELAQIMDQSLDENNIELVLRC--IMIAESRMSSSSCKAVQSIT 543
E IF LL YE A + L+E +I L ++ ES + + +S++
Sbjct: 497 ESIFPNRESLLKYENA--------RKLEEKSINLYESGGDLVALESILQVCLDELGRSVS 548
Query: 544 SELANTFHSCFSASWVYSKVVLLGISFLEREQRFNDAINLLRRLLSCFTCDSRRGYWTLR 603
++ +F F+ WVY++++ I E+ +++ I+ L L+ C +RGYW R
Sbjct: 549 KKVKYSFALKFTVGWVYTRILSWSIDIFEKLRKYQQCIDFLMLLIESPYCRGKRGYWWQR 608
Query: 604 LSIDLEHMGCPSESLSVAEGGLL-DSWVRAGSRVALQRRVLRLGKPPRRWKIPS----FS 658
+ I+ +H+ ++L +AE L D ++R+G R+A+++ +++L PPRRW+IP+ FS
Sbjct: 609 MIINHKHLHRSDDALLIAERSLKEDPFLRSGDRLAIEKHLIQLSSPPRRWRIPAGLIQFS 668
Query: 659 ESIKRKITEIHVQGRPLNCEIGMKSWF 685
+K I+ + + N + G KS +
Sbjct: 669 YKLKEPISTTIYREKVSNNQQGYKSKY 695
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 289 YQCNFNLLIQEVLGNSRHLFKADEIDFLESF-SMLSEDSQRLFVRLYMRKGPWFRLSNIS 347
Y +F ++ + V +HLF DE D++E L DSQ LFVRLY RKGPWF+++ +
Sbjct: 217 YLNDFLIVTETVYKRDKHLFINDEKDYIEGMIETLDRDSQHLFVRLYNRKGPWFQINELK 276
Query: 348 YP----EVSNSREAVRELIDNGYICSSEDTNELHDAIKDICNLLTVSELREISCVLQNCH 403
E+ N A+ L++ G++ +++ HD +I NLL + +L+ I+ +
Sbjct: 277 SSNYQNEIKNIGAAIESLVEYGFL--EYYSSDKHDY-NEIANLLKIDQLKSIASSFSIPN 333
Query: 404 RGSRKQ--KVIASLLCFYEDGIC---PFLPKMILDRTGLCIRVASKAEHLIWRA-ERLFF 457
++ KVI+ + + P K + + G I++ ++ L WR L+F
Sbjct: 334 SSGKETFLKVISGEPFKGQSTLFSPKPIYKKKVENLVGESIKIVTEVVEL-WRMIHHLYF 392
Query: 458 LN-GEQDLSAFLLVDLGIVKYPTYNC 482
+ D + ++ ++ +KYP Y
Sbjct: 393 YSWSTHDSKSMIVNNIMGIKYPEYTV 418
>sp|P90740|FAN1_CAEEL Fanconi-associated nuclease 1 homolog OS=Caenorhabditis elegans
GN=fan-1 PE=1 SV=1
Length = 865
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 247/584 (42%), Gaps = 67/584 (11%)
Query: 310 ADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNI--SYPEVSNSREAVRELIDNGYI 367
+D I F +LSE ++ L VRL++RK W+ L + YPE+ N +EAV EL +I
Sbjct: 246 SDIITFYRFVELLSEGAKCLLVRLFIRKPAWYNLEKLEQKYPEIPNIKEAVSELAKGHFI 305
Query: 368 CSSEDTNELHDA--IKDICNLLTVSELREISC------VLQNCHRGSRKQKVIASLLCFY 419
L +A I D+ L V++ ++ ++Q+ + ++ Q+ I
Sbjct: 306 DDDSSMKTLDEALQISDVVALKNVTKKFKLDGTKNRQELIQSLRKFAQSQQSIFGGTGNV 365
Query: 420 EDGICPFLPKMILDRTGLCIRVASKAEHLIWRAERLFFL------------------NGE 461
E I K + G C+RV L + LF + N
Sbjct: 366 EKSIL----KSLKQELGPCVRVRGGFVDLF---KCLFTIYCPVTTNSANVIDNPSTTNVY 418
Query: 462 QDLSAFLL-VDLGIVKYPTYN-CIIAEQIFSGLCDLLAYEEAIELAQIMDQSLDENNIEL 519
QDL +L V G V++P N C I + L Y + L + + N++
Sbjct: 419 QDLLYLMLSVANGTVQFPAPNPCPIIASFYKNRNMLQDYMISKSLEIAIVSQMSNGNLDA 478
Query: 520 VLRCIMIAES---RMSSSSCKAVQSITSELANTFHSCFSASWVYSKVVLLGISFLEREQR 576
L + A+ +MS + +S+ F++ WV+++ S LER+++
Sbjct: 479 ALDLAIDAKEFIEQMSDDDKRYYESL-----EIHERKFTSIWVFTRCCGHASSILERQKK 533
Query: 577 FNDAINLLRRLLSCFT-----CDSRRGYWTLRLSIDLE-HMGCPSESLSVAEGGLLDSWV 630
+ A+ + LL C RG W R+ ++L+ H+ E + + L D +
Sbjct: 534 YGMAVEWQKDLLITNKDIQSYCIDSRGIWWDRMLLNLDSHLKEKKECAKMIQIALQDPSI 593
Query: 631 RAGSRVALQRRVLRLGKPPRRWKIPSFSESIKRKITEIHVQGRPLNCEIGMKSWFYGEDG 690
+ +Q R L+L + P + P + ++K +V + L G + F D
Sbjct: 594 LEKELLMIQDRALKLKEMPADFVTPINIGNPEKKTITANVITKSLGD--GRINRFMIRDH 651
Query: 691 E-----KCGVEQLALQYYAGEGGGWHGVHTESGIWLTIFGLLMWDILFS---DVPDVFRS 742
E +C VE++ ++Y G GVH E W T+FGL +D++F+ V + S
Sbjct: 652 ETDDDVECSVEEVTRRHYLENEGFSTGVHDEGSTWHTLFGLFFYDVIFATDESVESTWLS 711
Query: 743 RFQNAPLDLATDSFYIVRKNLIESQ---LQKIYDGMAEEILITSWESHVGTVCRGVNWDR 799
Q+ P DL +++ Y RK E + L++ + EE + W+ R +W +
Sbjct: 712 ELQDCPSDL-SNTLYSKRKEKFEDRFVWLEEAEQELIEENIRKIWDLKHNETNRECSWKQ 770
Query: 800 HSL--SELRAAVTCIGGPCLAHLCRHLAQDYGSWSSGMPDLLIW 841
+ + + CI P L + R LA++Y + SG PDL +W
Sbjct: 771 FPMGAEDCVSFFQCIPRPALILILRRLAENYRNSRSGFPDLTLW 814
>sp|A8WZU5|FAN1_CAEBR Fanconi-associated nuclease 1 homolog OS=Caenorhabditis briggsae
GN=fan-1 PE=3 SV=2
Length = 878
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 152/605 (25%), Positives = 258/605 (42%), Gaps = 93/605 (15%)
Query: 310 ADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNI--SYPEVSNSREAVRELIDNGYI 367
+D I F LS+ ++ L VRL++RK W+ L + Y E+ N R A EL+ +I
Sbjct: 243 SDIITFYRFVECLSDGAKCLLVRLFVRKPNWYHLEKLEQKYTEILNIRGAAVELMKWEFI 302
Query: 368 CSSEDTNELHDA--IKDICNLLTVSELREISC------VLQNCHRGSRKQKVIASLLCFY 419
L++A I DI L V++ +I ++Q+ + + Q+ I
Sbjct: 303 SDDSTLKTLNEALRISDITVLKNVAKKFKIDGNKNRQDLVQSLRKFALSQQSIFGGTGSV 362
Query: 420 EDGICPFLPKMILDRTGLCIRVASKAEHLIWRAERLFFL------------------NGE 461
E + K + G CI++ + L + LF L N
Sbjct: 363 ELAVL----KSLKTELGTCIKIKDEMVDLF---KCLFTLYCPVTTNSANVIDNPASTNVY 415
Query: 462 QDLSAFLL-VDLGIVKYPTYN-CIIAEQIFSGLCDLLAY--EEAIELAQIMDQSLDENNI 517
QDL +L V+ G V++P N C + L+ Y +A+E + ++ S +++I
Sbjct: 416 QDLLYMMLSVENGSVEFPAPNPCPNIASFYKNRAMLMEYVTAKALESSLVLQMSNGDHDI 475
Query: 518 ELVLRCIMIAESRMSSSSCKAVQSITSELANTFHSCFSASWVYSKVVLLGISFLEREQRF 577
L L +++ Q E F++ WV+++ S LE+++++
Sbjct: 476 ALDL----AIDAKEFLDQMPLEQKKYYESLEIHERKFTSIWVHTRCCGHATSVLEKQKKY 531
Query: 578 NDAINLLRRLL-------SCFTCDSRRGYWTLRLSIDLE-HMGC---PS----------- 615
A+ + LL SC C RG W R+ ++L+ H+ PS
Sbjct: 532 GMAVEWQKDLLITNKDVQSC--CLDSRGMWWDRMLLNLDSHLKVSVFPSYSQTKKRFFQE 589
Query: 616 --ESLSVAEGGLLDSWVRAGSRVALQRRVLRLGKPPRRWKIP-SFSESIKRKITEIHVQG 672
E + + L DS + +++Q R L+L + P ++ P + +KR IT
Sbjct: 590 KTECAKMIQIALTDSSILEKELLSIQDRALKLKEMPPDFRPPLNIGTPMKRVIT-----A 644
Query: 673 RPLNCEIG--MKSWFYGEDGEK-----CGVEQLALQYYAGEGGGWHGVHTESGIWLTIFG 725
R ++ +G + F D EK C VE+ A ++Y GVH E W T+FG
Sbjct: 645 RTISKSLGDGRVNRFVFRDEEKEEDVECSVEEAARRWYIENDEFTTGVHDEGATWHTLFG 704
Query: 726 LLMWDILF---SDVPDVFRSRFQNAPLDLATDSFYIVRKNLIESQLQKIYDGMAEEI--- 779
LL +DI+F + + V+ S Q+ P DL +++ Y+ RK E + + + D E I
Sbjct: 705 LLFYDIIFCTDAVMASVWHSEVQDCPSDL-SNTLYLKRKEKFEERFEWLKDADQETIEDN 763
Query: 780 LITSWESHVGTVCRGVNWDRHSLSELRAAVT---CIGGPCLAHLCRHLAQDYGSWSSGMP 836
+ W R +W +H S + V+ CI P + + R LA++Y + SG P
Sbjct: 764 IRRIWGMKQNETNRECSW-KHFQSGIEDCVSIFQCIPRPAMLSIFRRLAENYRNSRSGFP 822
Query: 837 DLLIW 841
DL +W
Sbjct: 823 DLTLW 827
>sp|Q95216|HLTF_RABIT Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF
PE=1 SV=1
Length = 1005
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 149 VDGMSEATLRTFIVGRRYSDEKEIKIGAHISLSRDPNNVKDPNAIKVFSADSGCCKVLGY 208
+D + TLR +VG RY + ++L R+PNN D NAIKV + + +GY
Sbjct: 55 LDSVLFGTLRGHVVGLRYYT-GVVNNNEMVALQREPNNPYDKNAIKVNNVNGN---QVGY 110
Query: 209 LPKELSEYLSPLMEKYSLSFEGFV 232
L KEL+ L+ +M+ EG V
Sbjct: 111 LKKELAAALAYIMDNKLAQIEGVV 134
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1
SV=2
Length = 1009
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 149 VDGMSEATLRTFIVGRRYSDEKEIKIGAHISLSRDPNNVKDPNAIKVFSADSGCCKVLGY 208
VD + +LR +VG RY + ++L RDPNN D NAIKV + + +G+
Sbjct: 55 VDSVLFGSLRGHVVGLRYY-TGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGN---QVGH 110
Query: 209 LPKELSEYLSPLMEKYSLSFEGFV 232
L KEL+ L+ +M+ EG V
Sbjct: 111 LKKELAGALAYIMDNKLAQIEGVV 134
>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM4 PE=1 SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 763 LIESQLQKIYDGMAEEILITSWESHVGTVCRGVNWDRHSLSELRAAVTCIGGPCLAHLCR 822
L+ + Q Y ++E I + + + R V++ R+ + E + + CIG P AH+CR
Sbjct: 77 LMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIG-PWGAHICR 135
Query: 823 HLAQDYGS 830
DYG+
Sbjct: 136 EFTGDYGA 143
>sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
OS=Arabidopsis thaliana GN=At5g05130 PE=2 SV=1
Length = 881
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 134 SSPHINGPEHDVNV------TVDGMSEATLRTF----IVGRRYSDEKEIKIGAHISLSRD 183
SSP N E V + D +SE+ L F IVG +Y + I + L R+
Sbjct: 29 SSPMANEDEFQSPVEPSQQQSQDCVSESYLIGFVIANIVGLKYYSGR-INGREMVGLVRE 87
Query: 184 PNNVKDPNAIKVFSADSGCCKVLGYLPKELSEYLSPLMEKYSLSFEGFV 232
P NV D NAI+V + S + +G++ + ++ L+P+++ +++ EG V
Sbjct: 88 PLNVYDNNAIRVLNTRS---EQVGHIERTVAAVLAPMIDSHTIVVEGIV 133
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1
SV=1
Length = 1003
Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 155 ATLRTFIVGRRYSDEKEIKIGAHISLSRDPNNVKDPNAIKVFSADSGCCKVLGYLPKELS 214
T+R +VG RY + ++L R+PNN D NAIKV + + +G++ +E++
Sbjct: 61 GTMRGQVVGLRYYT-GVVNNNEMVALQREPNNPYDKNAIKVNNVNGN---QVGHIKREIA 116
Query: 215 EYLSPLMEKYSLSFEGFV 232
++ +M+ EG V
Sbjct: 117 AAVAYIMDNKLAQVEGVV 134
>sp|Q8UEH1|GLMS_AGRT5 Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=glmS PE=3 SV=3
Length = 608
Score = 36.6 bits (83), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 440 RVASKAEHLIWRAERLFFLNGEQDLSAFLLVDLGIVKYPTYNCIIAEQIFSGLCDLLAYE 499
+ S + + R R+ F+ E+ +A L + + P + +IA +FS LLAY
Sbjct: 527 KTVSNMQEVAARGGRIIFITDEKGAAASKLETMATITLPNVDELIAPMVFSLPIQLLAYH 586
Query: 500 EAIELAQIMDQ 510
A+ + +DQ
Sbjct: 587 TAVFMGTDVDQ 597
>sp|A5G0K5|ACCA_ACICJ Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Acidiphilium cryptum (strain JF-5) GN=accA PE=3 SV=1
Length = 318
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 305 RHLFKADEIDFLESFSMLSEDSQRLFVRLYMRKGPWFRLSNISYPEVSNSREAVRELI 362
R + E++ E ++LS+ ++R LY R PW + +PE +R+ + LI
Sbjct: 22 RRMTDPGELNIAEEVTLLSDKAERQLRTLYGRLSPWQKTQVARHPERPKARDVIAGLI 79
>sp|P32494|NGG1_YEAST Chromatin-remodeling complexes subunit NGG1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NGG1 PE=1
SV=1
Length = 702
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 11 LIGKRRRYLPNRESLLSAPIQVTLLNELLLDACLARGTK------RKL-TQRTLLQLNFS 63
L GK R +PN+++LL Q+ LNE+L +ARG + RK+ + Q N
Sbjct: 48 LNGKSVRSIPNKKTLLELQSQLDSLNEIL--GTIARGDQETIEALRKIRDSKNEKQANDE 105
Query: 64 AQ---TQDQNHSNETKLSTTNVFSEG---PVESLEQNSICG 98
Q D H + T TN+ +G P + N I G
Sbjct: 106 KQETSNADGQHESSTATEETNIIDKGVQSPPKPPPSNEISG 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 305,287,561
Number of Sequences: 539616
Number of extensions: 12786592
Number of successful extensions: 29068
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 28984
Number of HSP's gapped (non-prelim): 34
length of query: 841
length of database: 191,569,459
effective HSP length: 126
effective length of query: 715
effective length of database: 123,577,843
effective search space: 88358157745
effective search space used: 88358157745
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)