Query 037961
Match_columns 262
No_of_seqs 212 out of 2308
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:08:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 100.0 4.5E-49 1.5E-53 331.7 23.9 245 3-262 9-253 (257)
2 3g5t_A Trans-aconitate 3-methy 100.0 4.4E-35 1.5E-39 251.7 20.4 246 8-260 10-298 (299)
3 2yqz_A Hypothetical protein TT 100.0 4.7E-28 1.6E-32 203.4 15.7 242 1-261 1-263 (263)
4 3ccf_A Cyclopropane-fatty-acyl 99.9 6.4E-24 2.2E-28 180.3 12.6 232 9-261 32-278 (279)
5 2p35_A Trans-aconitate 2-methy 99.9 1E-22 3.5E-27 170.5 15.3 232 9-261 8-259 (259)
6 1vl5_A Unknown conserved prote 99.9 1.6E-22 5.5E-27 169.7 15.3 229 10-262 12-253 (260)
7 1xxl_A YCGJ protein; structura 99.9 2.2E-21 7.4E-26 161.1 16.4 209 31-261 19-237 (239)
8 3ege_A Putative methyltransfer 99.8 1.5E-20 5.1E-25 158.1 11.7 126 4-138 4-132 (261)
9 3l8d_A Methyltransferase; stru 99.8 1.7E-19 6E-24 149.3 13.1 129 3-138 18-155 (242)
10 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.5E-19 8.6E-24 150.7 13.1 122 7-137 37-179 (261)
11 3e23_A Uncharacterized protein 99.8 3.9E-19 1.3E-23 144.4 11.1 124 3-136 15-141 (211)
12 2aot_A HMT, histamine N-methyl 99.8 6.4E-19 2.2E-23 150.5 12.4 101 33-138 52-174 (292)
13 4htf_A S-adenosylmethionine-de 99.8 8.7E-19 3E-23 148.9 13.0 129 3-138 28-175 (285)
14 3bus_A REBM, methyltransferase 99.8 1.6E-18 5.3E-23 146.2 14.4 109 22-137 48-167 (273)
15 3h2b_A SAM-dependent methyltra 99.8 1E-18 3.4E-23 141.0 11.8 127 3-138 7-143 (203)
16 1pjz_A Thiopurine S-methyltran 99.8 8.4E-19 2.9E-23 142.0 9.4 107 21-134 9-138 (203)
17 2o57_A Putative sarcosine dime 99.8 3.9E-18 1.3E-22 145.6 13.8 99 32-137 81-188 (297)
18 3hnr_A Probable methyltransfer 99.8 3.2E-18 1.1E-22 139.7 12.0 125 3-137 7-146 (220)
19 3dlc_A Putative S-adenosyl-L-m 99.8 1.8E-18 6.2E-23 140.6 10.5 115 15-137 25-149 (219)
20 2gs9_A Hypothetical protein TT 99.8 1.2E-18 4.2E-23 141.3 9.2 126 4-139 2-135 (211)
21 3kkz_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 143.6 12.3 123 6-136 14-150 (267)
22 3dtn_A Putative methyltransfer 99.8 5.3E-18 1.8E-22 139.8 12.6 128 2-138 7-150 (234)
23 3pfg_A N-methyltransferase; N, 99.8 2.2E-18 7.5E-23 144.7 9.8 124 4-135 13-150 (263)
24 3ou2_A SAM-dependent methyltra 99.8 2E-18 6.9E-23 140.4 9.2 101 31-139 44-149 (218)
25 2avn_A Ubiquinone/menaquinone 99.8 1E-17 3.5E-22 140.5 13.6 129 3-138 19-154 (260)
26 1nkv_A Hypothetical protein YJ 99.7 3.3E-18 1.1E-22 142.8 10.0 118 10-136 12-140 (256)
27 3f4k_A Putative methyltransfer 99.7 8.8E-18 3E-22 140.3 12.2 121 8-136 16-150 (257)
28 2p7i_A Hypothetical protein; p 99.7 9.6E-18 3.3E-22 138.9 12.1 108 24-140 34-145 (250)
29 3dli_A Methyltransferase; PSI- 99.7 6.7E-18 2.3E-22 139.9 11.1 115 15-139 21-143 (240)
30 3g5l_A Putative S-adenosylmeth 99.7 8E-18 2.7E-22 140.4 11.5 105 25-136 34-145 (253)
31 3dh0_A SAM dependent methyltra 99.7 1E-18 3.5E-23 142.6 5.8 127 3-138 5-145 (219)
32 3bkw_A MLL3908 protein, S-aden 99.7 9.8E-18 3.3E-22 138.7 11.8 97 33-136 43-144 (243)
33 3e8s_A Putative SAM dependent 99.7 2.6E-17 8.8E-22 134.4 13.7 130 3-138 15-154 (227)
34 3mgg_A Methyltransferase; NYSG 99.7 6.9E-17 2.4E-21 136.4 16.7 99 32-137 36-143 (276)
35 3d2l_A SAM-dependent methyltra 99.7 2E-17 7E-22 136.7 12.1 124 4-136 3-137 (243)
36 2gb4_A Thiopurine S-methyltran 99.7 1.3E-17 4.3E-22 139.5 10.8 107 21-134 54-189 (252)
37 1ve3_A Hypothetical protein PH 99.7 3.2E-17 1.1E-21 134.2 12.1 110 21-137 26-143 (227)
38 1y8c_A S-adenosylmethionine-de 99.7 2.1E-17 7.1E-22 136.7 11.1 125 4-136 2-142 (246)
39 3ujc_A Phosphoethanolamine N-m 99.7 5.1E-17 1.8E-21 136.0 13.2 110 21-137 41-160 (266)
40 1p91_A Ribosomal RNA large sub 99.7 6.6E-17 2.3E-21 136.1 13.9 192 22-261 73-268 (269)
41 3sm3_A SAM-dependent methyltra 99.7 7.4E-17 2.5E-21 132.5 13.6 111 23-140 20-145 (235)
42 3vc1_A Geranyl diphosphate 2-C 99.7 5E-17 1.7E-21 140.0 13.1 106 25-137 106-222 (312)
43 1vlm_A SAM-dependent methyltra 99.7 5E-17 1.7E-21 132.8 12.4 124 1-138 13-141 (219)
44 3jwh_A HEN1; methyltransferase 99.7 2.5E-17 8.6E-22 134.3 10.3 112 18-136 12-141 (217)
45 3ofk_A Nodulation protein S; N 99.7 3.4E-17 1.2E-21 133.2 10.7 98 32-137 50-155 (216)
46 3g2m_A PCZA361.24; SAM-depende 99.7 2.6E-17 8.8E-22 140.8 10.3 128 4-139 50-193 (299)
47 4fsd_A Arsenic methyltransfera 99.7 7.3E-17 2.5E-21 142.9 13.2 104 32-136 82-203 (383)
48 3thr_A Glycine N-methyltransfe 99.7 7.8E-17 2.7E-21 137.2 12.5 111 21-138 43-177 (293)
49 2pxx_A Uncharacterized protein 99.7 6.4E-17 2.2E-21 131.1 10.6 114 20-140 29-163 (215)
50 1ri5_A MRNA capping enzyme; me 99.7 4.1E-17 1.4E-21 138.9 9.8 129 3-138 25-176 (298)
51 3gu3_A Methyltransferase; alph 99.7 1.2E-16 4E-21 135.9 12.1 112 19-138 5-128 (284)
52 3i9f_A Putative type 11 methyl 99.7 7.1E-17 2.4E-21 126.5 9.9 105 22-138 8-114 (170)
53 3hem_A Cyclopropane-fatty-acyl 99.7 2.2E-16 7.4E-21 135.3 13.6 105 24-138 61-185 (302)
54 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.6E-16 5.4E-21 132.3 11.8 126 4-136 49-197 (254)
55 3bxo_A N,N-dimethyltransferase 99.7 8.8E-17 3E-21 132.6 10.1 125 4-136 3-141 (239)
56 2ex4_A Adrenal gland protein A 99.7 1.2E-16 4.1E-21 132.4 10.8 98 33-137 79-186 (241)
57 3bgv_A MRNA CAP guanine-N7 met 99.7 5.6E-17 1.9E-21 139.7 8.8 110 22-138 23-157 (313)
58 3g07_A 7SK snRNA methylphospha 99.7 3.1E-17 1.1E-21 140.1 6.9 101 33-135 46-219 (292)
59 3mti_A RRNA methylase; SAM-dep 99.7 2.1E-16 7.3E-21 125.5 11.3 106 26-138 15-137 (185)
60 3jwg_A HEN1, methyltransferase 99.7 1.4E-16 4.7E-21 130.0 10.4 107 22-135 16-140 (219)
61 3cc8_A Putative methyltransfer 99.7 1.5E-16 5.1E-21 130.1 10.6 122 10-139 8-133 (230)
62 3lcc_A Putative methyl chlorid 99.7 2.1E-16 7.1E-21 130.4 11.3 110 21-138 54-173 (235)
63 3iv6_A Putative Zn-dependent a 99.7 9.5E-17 3.3E-21 134.5 9.1 125 3-135 12-147 (261)
64 3orh_A Guanidinoacetate N-meth 99.7 8.5E-17 2.9E-21 133.2 8.1 109 21-136 47-170 (236)
65 2p8j_A S-adenosylmethionine-de 99.7 2.6E-16 9E-21 127.2 10.7 109 22-138 13-130 (209)
66 2kw5_A SLR1183 protein; struct 99.7 1.5E-16 5E-21 128.2 9.1 111 20-139 17-134 (202)
67 4e2x_A TCAB9; kijanose, tetron 99.7 2.3E-16 7.8E-21 141.1 10.9 112 22-136 94-208 (416)
68 2xvm_A Tellurite resistance pr 99.7 6.9E-16 2.4E-20 123.5 12.6 96 33-136 32-136 (199)
69 3m33_A Uncharacterized protein 99.7 3E-16 1E-20 128.9 10.5 101 21-133 35-139 (226)
70 3ggd_A SAM-dependent methyltra 99.7 4.8E-16 1.6E-20 128.9 11.2 115 23-139 46-166 (245)
71 3cgg_A SAM-dependent methyltra 99.7 4E-15 1.4E-19 118.4 15.9 120 26-152 39-164 (195)
72 1kpg_A CFA synthase;, cyclopro 99.7 1.3E-15 4.3E-20 129.4 13.7 105 23-137 52-169 (287)
73 2zfu_A Nucleomethylin, cerebra 99.6 7E-16 2.4E-20 125.4 10.7 111 22-152 57-168 (215)
74 1wzn_A SAM-dependent methyltra 99.6 5.6E-16 1.9E-20 129.0 10.2 126 1-134 1-143 (252)
75 1zx0_A Guanidinoacetate N-meth 99.6 2.5E-16 8.6E-21 130.1 8.0 110 21-137 47-171 (236)
76 2fk8_A Methoxy mycolic acid sy 99.6 2E-15 6.7E-20 130.2 13.5 106 23-138 78-196 (318)
77 2vdw_A Vaccinia virus capping 99.6 5.7E-16 1.9E-20 132.8 10.0 103 33-138 48-171 (302)
78 3dmg_A Probable ribosomal RNA 99.6 1.3E-15 4.6E-20 134.4 12.6 124 22-152 218-356 (381)
79 3m70_A Tellurite resistance pr 99.6 1.4E-15 4.8E-20 129.1 12.1 107 20-136 109-223 (286)
80 3dxy_A TRNA (guanine-N(7)-)-me 99.6 6.4E-16 2.2E-20 126.5 9.5 100 32-138 33-152 (218)
81 2g72_A Phenylethanolamine N-me 99.6 2.8E-16 9.6E-21 133.7 7.6 97 33-136 71-215 (289)
82 3p9n_A Possible methyltransfer 99.6 1.4E-15 4.9E-20 121.3 11.2 107 24-137 34-154 (189)
83 3fzg_A 16S rRNA methylase; met 99.6 6.8E-16 2.3E-20 122.0 8.3 108 21-136 37-152 (200)
84 3bkx_A SAM-dependent methyltra 99.6 1.5E-15 5.2E-20 127.9 11.1 130 5-138 2-161 (275)
85 3e05_A Precorrin-6Y C5,15-meth 99.6 5.4E-15 1.8E-19 119.3 13.8 111 19-138 24-144 (204)
86 3njr_A Precorrin-6Y methylase; 99.6 3.7E-15 1.3E-19 120.6 12.0 113 16-139 36-157 (204)
87 3ocj_A Putative exported prote 99.6 1.6E-15 5.6E-20 130.0 10.0 106 25-138 110-229 (305)
88 2fca_A TRNA (guanine-N(7)-)-me 99.6 4.2E-15 1.4E-19 121.1 11.6 98 32-136 37-153 (213)
89 3htx_A HEN1; HEN1, small RNA m 99.6 3E-15 1E-19 140.8 12.0 114 16-137 702-835 (950)
90 1dus_A MJ0882; hypothetical pr 99.6 5.3E-15 1.8E-19 117.6 11.4 110 22-139 39-160 (194)
91 2a14_A Indolethylamine N-methy 99.6 3.2E-16 1.1E-20 131.8 4.5 98 32-136 54-197 (263)
92 2qe6_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 122.6 14.6 130 8-138 43-198 (274)
93 3q87_B N6 adenine specific DNA 99.6 9.2E-15 3.1E-19 114.8 12.6 117 22-152 12-138 (170)
94 3sso_A Methyltransferase; macr 99.6 1.3E-15 4.4E-20 133.5 7.6 120 3-134 182-322 (419)
95 3hm2_A Precorrin-6Y C5,15-meth 99.6 9E-15 3.1E-19 115.0 11.2 109 21-139 11-130 (178)
96 2ift_A Putative methylase HI07 99.6 2.3E-15 7.8E-20 121.5 7.9 99 33-138 53-165 (201)
97 1xdz_A Methyltransferase GIDB; 99.6 6.3E-15 2.1E-19 122.1 10.7 95 32-136 69-174 (240)
98 1ws6_A Methyltransferase; stru 99.6 1E-14 3.5E-19 113.8 11.2 119 15-139 20-150 (171)
99 3evz_A Methyltransferase; NYSG 99.6 1.4E-14 5E-19 118.8 12.3 105 28-138 50-181 (230)
100 3fpf_A Mtnas, putative unchara 99.6 1.3E-14 4.3E-19 123.0 11.9 96 30-136 119-222 (298)
101 3hp7_A Hemolysin, putative; st 99.6 6.8E-15 2.3E-19 124.7 10.3 109 22-135 72-184 (291)
102 1nt2_A Fibrillarin-like PRE-rR 99.6 9.5E-15 3.2E-19 118.8 10.7 98 32-135 56-160 (210)
103 2i62_A Nicotinamide N-methyltr 99.6 2.5E-15 8.6E-20 125.7 7.5 98 32-136 55-198 (265)
104 2fhp_A Methylase, putative; al 99.6 6.6E-15 2.3E-19 116.7 9.4 120 15-138 24-156 (187)
105 4df3_A Fibrillarin-like rRNA/T 99.6 1.4E-14 4.7E-19 119.1 11.3 118 12-135 52-181 (233)
106 3lbf_A Protein-L-isoaspartate 99.6 1.7E-14 5.8E-19 116.7 11.7 106 21-138 63-176 (210)
107 2fpo_A Methylase YHHF; structu 99.6 8.4E-15 2.9E-19 118.3 9.8 115 15-137 34-161 (202)
108 1af7_A Chemotaxis receptor met 99.6 1.3E-14 4.6E-19 122.3 11.1 95 33-134 105-250 (274)
109 3grz_A L11 mtase, ribosomal pr 99.6 9.5E-15 3.2E-19 117.9 9.8 107 21-138 48-161 (205)
110 3uwp_A Histone-lysine N-methyl 99.6 4.1E-15 1.4E-19 130.7 8.1 106 23-135 161-287 (438)
111 3eey_A Putative rRNA methylase 99.6 2.3E-14 7.7E-19 114.9 11.4 104 28-138 17-141 (197)
112 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.4E-14 8.3E-19 116.4 11.5 98 32-136 40-156 (214)
113 3gdh_A Trimethylguanosine synt 99.6 3.6E-16 1.2E-20 129.4 0.3 94 33-134 78-179 (241)
114 2esr_A Methyltransferase; stru 99.6 5.9E-15 2E-19 116.2 7.3 100 32-138 30-140 (177)
115 1ej0_A FTSJ; methyltransferase 99.5 6.4E-15 2.2E-19 115.2 6.9 105 31-141 20-141 (180)
116 3mq2_A 16S rRNA methyltransfer 99.5 1.6E-14 5.6E-19 117.6 9.6 106 19-134 15-138 (218)
117 2plw_A Ribosomal RNA methyltra 99.5 3E-14 1E-18 114.4 10.9 111 16-138 3-156 (201)
118 3ckk_A TRNA (guanine-N(7)-)-me 99.5 3E-14 1E-18 117.8 10.8 99 32-137 45-169 (235)
119 2fyt_A Protein arginine N-meth 99.5 2.6E-14 8.9E-19 124.5 10.7 94 32-133 63-168 (340)
120 4dzr_A Protein-(glutamine-N5) 99.5 8.9E-15 3.1E-19 118.2 6.8 122 21-151 15-178 (215)
121 1vbf_A 231AA long hypothetical 99.5 5.5E-14 1.9E-18 115.4 11.5 106 21-138 56-167 (231)
122 4dcm_A Ribosomal RNA large sub 99.5 6.5E-14 2.2E-18 123.4 12.2 121 24-152 211-350 (375)
123 1l3i_A Precorrin-6Y methyltran 99.5 7.1E-14 2.4E-18 110.8 11.3 109 20-138 18-136 (192)
124 1fbn_A MJ fibrillarin homologu 99.5 7.5E-14 2.6E-18 114.8 11.4 102 21-135 57-177 (230)
125 3p2e_A 16S rRNA methylase; met 99.5 2.3E-14 8E-19 117.7 8.0 98 31-135 22-138 (225)
126 3q7e_A Protein arginine N-meth 99.5 4.7E-14 1.6E-18 123.3 10.2 95 32-134 65-171 (349)
127 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.7E-13 5.7E-18 114.2 13.2 111 16-138 78-200 (258)
128 3adn_A Spermidine synthase; am 99.5 1E-13 3.5E-18 118.2 11.8 112 19-136 69-198 (294)
129 3lpm_A Putative methyltransfer 99.5 5.9E-14 2E-18 117.6 10.2 97 33-136 49-176 (259)
130 3r0q_C Probable protein argini 99.5 9.2E-14 3.1E-18 122.6 11.6 103 23-134 51-167 (376)
131 2nxc_A L11 mtase, ribosomal pr 99.5 9.6E-14 3.3E-18 116.0 11.0 107 22-138 109-220 (254)
132 2yxd_A Probable cobalt-precorr 99.5 1.9E-13 6.5E-18 107.6 11.5 109 18-139 18-134 (183)
133 1dl5_A Protein-L-isoaspartate 99.5 9.9E-14 3.4E-18 119.7 10.7 103 22-136 62-175 (317)
134 3reo_A (ISO)eugenol O-methyltr 99.5 1.4E-13 4.7E-18 121.2 11.8 105 23-138 190-302 (368)
135 2yxe_A Protein-L-isoaspartate 99.5 1.6E-13 5.6E-18 111.3 11.3 105 21-137 63-178 (215)
136 1fp1_D Isoliquiritigenin 2'-O- 99.5 8.6E-14 2.9E-18 122.6 10.3 94 32-136 208-306 (372)
137 2frn_A Hypothetical protein PH 99.5 1.3E-13 4.4E-18 116.8 11.0 104 24-138 116-227 (278)
138 3mb5_A SAM-dependent methyltra 99.5 3.6E-13 1.2E-17 112.2 13.4 110 16-138 75-196 (255)
139 3gwz_A MMCR; methyltransferase 99.5 2.5E-13 8.4E-18 119.6 12.5 104 24-137 191-308 (369)
140 2r3s_A Uncharacterized protein 99.5 2.3E-13 8E-18 117.8 12.2 98 32-138 164-273 (335)
141 3u81_A Catechol O-methyltransf 99.5 1.7E-13 5.8E-18 112.0 10.7 98 33-138 58-172 (221)
142 1i9g_A Hypothetical protein RV 99.5 3.6E-13 1.2E-17 113.8 12.9 112 16-139 81-206 (280)
143 3i53_A O-methyltransferase; CO 99.5 1.2E-13 4.2E-18 119.7 10.2 96 33-138 169-276 (332)
144 3ntv_A MW1564 protein; rossman 99.5 2.1E-13 7.3E-18 112.3 11.1 111 15-134 51-174 (232)
145 4azs_A Methyltransferase WBDD; 99.5 4.5E-14 1.5E-18 131.0 7.7 104 27-137 60-174 (569)
146 3dou_A Ribosomal RNA large sub 99.5 1.7E-13 5.8E-18 109.7 10.1 118 16-140 6-143 (191)
147 2pjd_A Ribosomal RNA small sub 99.5 8.2E-14 2.8E-18 121.5 8.9 120 23-151 184-318 (343)
148 1o9g_A RRNA methyltransferase; 99.5 2.1E-13 7.3E-18 113.5 11.0 108 22-136 38-214 (250)
149 1fp2_A Isoflavone O-methyltran 99.5 1.6E-13 5.5E-18 120.0 10.6 95 32-137 187-289 (352)
150 3g89_A Ribosomal RNA small sub 99.5 1.6E-13 5.3E-18 114.5 9.9 95 33-137 80-185 (249)
151 2wa2_A Non-structural protein 99.5 5.9E-14 2E-18 118.6 7.3 95 32-138 81-195 (276)
152 2b3t_A Protein methyltransfera 99.5 2.7E-13 9.3E-18 114.6 11.4 108 20-135 95-237 (276)
153 2nyu_A Putative ribosomal RNA 99.5 1.4E-13 4.7E-18 110.0 9.0 104 31-140 20-149 (196)
154 2ip2_A Probable phenazine-spec 99.5 3.2E-13 1.1E-17 117.1 12.0 116 10-137 144-273 (334)
155 3opn_A Putative hemolysin; str 99.5 6.9E-14 2.4E-18 115.4 7.3 96 33-136 37-137 (232)
156 2pbf_A Protein-L-isoaspartate 99.5 1.2E-13 4.1E-18 113.1 8.5 101 24-136 71-193 (227)
157 2gpy_A O-methyltransferase; st 99.5 2.7E-13 9.3E-18 111.5 10.7 113 15-136 34-160 (233)
158 2bm8_A Cephalosporin hydroxyla 99.5 1.1E-13 3.6E-18 114.6 8.2 98 33-136 81-187 (236)
159 3p9c_A Caffeic acid O-methyltr 99.5 3.3E-13 1.1E-17 118.6 11.8 96 32-138 200-300 (364)
160 3bwc_A Spermidine synthase; SA 99.5 3.3E-13 1.1E-17 115.7 11.4 100 31-137 93-211 (304)
161 2oxt_A Nucleoside-2'-O-methylt 99.5 8.6E-14 2.9E-18 117.0 7.5 96 31-138 72-187 (265)
162 3id6_C Fibrillarin-like rRNA/T 99.5 4.1E-13 1.4E-17 110.4 11.1 118 12-136 51-181 (232)
163 3dr5_A Putative O-methyltransf 99.5 4.1E-13 1.4E-17 109.9 10.8 103 23-134 44-161 (221)
164 1iy9_A Spermidine synthase; ro 99.4 7.1E-13 2.4E-17 112.0 12.5 100 31-137 73-190 (275)
165 1inl_A Spermidine synthase; be 99.4 5.3E-13 1.8E-17 114.0 11.9 101 31-138 88-207 (296)
166 2ipx_A RRNA 2'-O-methyltransfe 99.4 3.4E-13 1.2E-17 111.0 10.2 98 32-135 76-181 (233)
167 1yb2_A Hypothetical protein TA 99.4 3.9E-13 1.3E-17 113.6 10.6 95 32-138 109-213 (275)
168 3dp7_A SAM-dependent methyltra 99.4 4.8E-13 1.6E-17 117.5 11.5 97 32-137 178-288 (363)
169 1g6q_1 HnRNP arginine N-methyl 99.4 3.2E-13 1.1E-17 117.1 10.2 95 32-134 37-143 (328)
170 1r18_A Protein-L-isoaspartate( 99.4 1.5E-13 5.2E-18 112.7 7.7 100 24-136 75-194 (227)
171 1qzz_A RDMB, aclacinomycin-10- 99.4 4.1E-13 1.4E-17 118.1 11.0 96 32-137 181-288 (374)
172 1i1n_A Protein-L-isoaspartate 99.4 3.6E-13 1.2E-17 110.2 9.6 102 24-137 68-183 (226)
173 1u2z_A Histone-lysine N-methyl 99.4 2.5E-13 8.7E-18 121.1 9.2 111 22-135 229-358 (433)
174 3gjy_A Spermidine synthase; AP 99.4 5.8E-13 2E-17 114.1 10.7 114 18-138 69-202 (317)
175 1x19_A CRTF-related protein; m 99.4 9.5E-13 3.3E-17 115.3 12.4 104 24-137 179-296 (359)
176 1uir_A Polyamine aminopropyltr 99.4 6.2E-13 2.1E-17 114.5 11.0 99 31-136 75-195 (314)
177 1jsx_A Glucose-inhibited divis 99.4 3.4E-13 1.2E-17 108.7 8.7 93 33-136 65-165 (207)
178 3c3p_A Methyltransferase; NP_9 99.4 8.8E-13 3E-17 106.7 11.0 93 33-135 56-159 (210)
179 3tfw_A Putative O-methyltransf 99.4 8.5E-13 2.9E-17 109.9 11.0 96 32-136 62-170 (248)
180 3giw_A Protein of unknown func 99.4 5.7E-13 2E-17 111.6 9.8 106 33-139 78-203 (277)
181 1g8a_A Fibrillarin-like PRE-rR 99.4 9.9E-13 3.4E-17 107.7 11.0 114 15-135 51-177 (227)
182 2yvl_A TRMI protein, hypotheti 99.4 2.8E-12 9.5E-17 106.1 13.8 109 18-138 75-192 (248)
183 3tma_A Methyltransferase; thum 99.4 1.5E-12 5E-17 114.0 12.6 112 20-138 188-319 (354)
184 2y1w_A Histone-arginine methyl 99.4 6.3E-13 2.1E-17 116.1 10.2 94 32-134 49-153 (348)
185 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.1E-12 3.9E-17 108.9 11.2 97 33-136 49-173 (246)
186 2pt6_A Spermidine synthase; tr 99.4 1.1E-12 3.9E-17 113.1 11.5 100 31-137 114-231 (321)
187 2ozv_A Hypothetical protein AT 99.4 6.2E-13 2.1E-17 111.5 9.3 104 32-136 35-170 (260)
188 1xj5_A Spermidine synthase 1; 99.4 1.2E-12 4.1E-17 113.5 11.2 98 31-135 118-234 (334)
189 1jg1_A PIMT;, protein-L-isoasp 99.4 9.6E-13 3.3E-17 108.5 10.2 105 21-138 77-191 (235)
190 3bzb_A Uncharacterized protein 99.4 1.1E-12 3.8E-17 111.1 10.6 111 21-134 65-203 (281)
191 1o54_A SAM-dependent O-methylt 99.4 2.6E-12 9E-17 108.5 12.7 109 17-138 95-215 (277)
192 2igt_A SAM dependent methyltra 99.4 9.9E-13 3.4E-17 114.1 10.3 115 32-153 152-290 (332)
193 3a27_A TYW2, uncharacterized p 99.4 1.8E-12 6E-17 109.4 11.5 101 27-138 113-221 (272)
194 2b25_A Hypothetical protein; s 99.4 1.2E-12 4.1E-17 113.7 10.5 112 17-139 88-222 (336)
195 2ld4_A Anamorsin; methyltransf 99.4 1.6E-13 5.4E-18 108.0 4.4 84 31-135 10-100 (176)
196 3tr6_A O-methyltransferase; ce 99.4 1.2E-12 4E-17 107.0 9.8 98 33-136 64-174 (225)
197 2i7c_A Spermidine synthase; tr 99.4 2.1E-12 7.3E-17 109.6 11.2 100 31-137 76-193 (283)
198 2cmg_A Spermidine synthase; tr 99.4 2.2E-12 7.6E-17 108.2 11.2 92 31-136 70-171 (262)
199 3duw_A OMT, O-methyltransferas 99.4 1.3E-12 4.4E-17 106.6 9.3 99 32-135 57-166 (223)
200 2o07_A Spermidine synthase; st 99.4 2.2E-12 7.5E-17 110.5 10.8 99 31-136 93-209 (304)
201 1mjf_A Spermidine synthase; sp 99.4 3.3E-12 1.1E-16 108.3 11.7 98 31-136 73-193 (281)
202 3lst_A CALO1 methyltransferase 99.4 1.6E-12 5.6E-17 113.4 10.0 95 32-137 183-287 (348)
203 1sui_A Caffeoyl-COA O-methyltr 99.4 1.8E-12 6.3E-17 107.8 9.6 101 24-134 71-188 (247)
204 1zg3_A Isoflavanone 4'-O-methy 99.4 1.5E-12 5.3E-17 114.0 9.5 95 32-137 192-294 (358)
205 3mcz_A O-methyltransferase; ad 99.4 1.6E-12 5.6E-17 113.4 9.5 96 34-137 180-288 (352)
206 1tw3_A COMT, carminomycin 4-O- 99.4 2.9E-12 1E-16 112.1 11.1 97 32-138 182-290 (360)
207 4dmg_A Putative uncharacterize 99.4 4.5E-12 1.5E-16 112.2 12.3 110 24-140 205-330 (393)
208 2p41_A Type II methyltransfera 99.4 2.6E-13 8.8E-18 116.4 4.1 97 31-137 80-192 (305)
209 4hc4_A Protein arginine N-meth 99.4 1.7E-12 5.8E-17 113.9 9.4 93 33-134 83-187 (376)
210 2b2c_A Spermidine synthase; be 99.4 2.9E-12 9.9E-17 110.2 10.3 99 31-136 106-222 (314)
211 3r3h_A O-methyltransferase, SA 99.4 3.8E-13 1.3E-17 111.6 4.7 93 33-134 60-168 (242)
212 2avd_A Catechol-O-methyltransf 99.4 2.9E-12 1E-16 104.9 9.9 100 32-136 68-179 (229)
213 1ne2_A Hypothetical protein TA 99.3 2.3E-12 8E-17 103.4 8.4 85 32-125 50-139 (200)
214 3c3y_A Pfomt, O-methyltransfer 99.3 4.6E-12 1.6E-16 104.7 10.3 108 23-135 61-180 (237)
215 1zq9_A Probable dimethyladenos 99.3 4.1E-12 1.4E-16 107.9 10.1 104 21-133 14-144 (285)
216 3cbg_A O-methyltransferase; cy 99.3 4.7E-12 1.6E-16 104.3 9.9 99 33-136 72-182 (232)
217 2h00_A Methyltransferase 10 do 99.3 9.9E-13 3.4E-17 109.6 5.8 106 23-135 51-191 (254)
218 2hnk_A SAM-dependent O-methylt 99.3 4E-12 1.4E-16 105.0 9.2 100 32-136 59-181 (239)
219 2b78_A Hypothetical protein SM 99.3 4.7E-12 1.6E-16 112.0 10.0 124 26-152 205-347 (385)
220 3b3j_A Histone-arginine methyl 99.3 3E-12 1E-16 116.2 8.5 102 24-134 147-261 (480)
221 1nv8_A HEMK protein; class I a 99.3 5.9E-12 2E-16 106.9 9.7 106 21-135 109-248 (284)
222 1ixk_A Methyltransferase; open 99.3 1.8E-11 6.1E-16 105.4 12.2 100 32-138 117-248 (315)
223 3ajd_A Putative methyltransfer 99.3 9.8E-12 3.4E-16 104.9 9.7 100 32-138 82-213 (274)
224 2qm3_A Predicted methyltransfe 99.3 2.2E-11 7.5E-16 107.3 11.1 96 33-136 172-277 (373)
225 3lcv_B Sisomicin-gentamicin re 99.3 1.3E-11 4.3E-16 102.0 8.7 108 21-137 120-237 (281)
226 2as0_A Hypothetical protein PH 99.3 1.2E-11 4.2E-16 109.7 9.1 109 24-139 208-338 (396)
227 3frh_A 16S rRNA methylase; met 99.2 2.2E-11 7.4E-16 99.6 9.3 106 21-136 94-206 (253)
228 2yx1_A Hypothetical protein MJ 99.2 3.4E-11 1.2E-15 104.6 10.6 101 26-140 188-295 (336)
229 1wxx_A TT1595, hypothetical pr 99.2 1.1E-11 3.7E-16 109.6 7.5 100 33-139 209-328 (382)
230 3c0k_A UPF0064 protein YCCW; P 99.2 3.7E-11 1.3E-15 106.7 10.4 110 26-139 214-342 (396)
231 3kr9_A SAM-dependent methyltra 99.2 3.9E-11 1.3E-15 98.0 9.5 117 24-152 6-132 (225)
232 3lec_A NADB-rossmann superfami 99.2 3.7E-11 1.3E-15 98.3 9.3 118 24-152 12-138 (230)
233 2h1r_A Dimethyladenosine trans 99.2 2.4E-11 8.2E-16 103.9 8.3 85 21-113 28-120 (299)
234 3k6r_A Putative transferase PH 99.2 5.1E-11 1.7E-15 100.4 10.1 102 25-137 117-226 (278)
235 3gnl_A Uncharacterized protein 99.2 4.1E-11 1.4E-15 98.9 9.3 118 24-152 12-138 (244)
236 1yub_A Ermam, rRNA methyltrans 99.2 3E-13 1E-17 112.4 -4.0 107 21-135 15-144 (245)
237 1qam_A ERMC' methyltransferase 99.2 3.6E-11 1.2E-15 99.8 8.5 85 20-111 15-106 (244)
238 4a6d_A Hydroxyindole O-methylt 99.2 1.9E-10 6.4E-15 100.6 13.2 96 32-137 178-284 (353)
239 3gru_A Dimethyladenosine trans 99.2 5.2E-11 1.8E-15 101.3 8.9 86 21-112 36-127 (295)
240 3v97_A Ribosomal RNA large sub 99.2 5.2E-11 1.8E-15 112.8 9.6 100 32-138 538-659 (703)
241 1wy7_A Hypothetical protein PH 99.2 1.3E-10 4.4E-15 93.5 10.4 84 33-125 49-141 (207)
242 3tm4_A TRNA (guanine N2-)-meth 99.2 8.3E-11 2.8E-15 103.6 9.1 101 20-126 203-322 (373)
243 2ih2_A Modification methylase 99.1 1.1E-10 3.7E-15 104.2 9.6 107 20-137 24-165 (421)
244 2yxl_A PH0851 protein, 450AA l 99.1 2.3E-10 8E-15 103.1 11.6 100 32-138 258-391 (450)
245 2frx_A Hypothetical protein YE 99.1 1.9E-10 6.4E-15 104.3 10.3 99 33-138 117-248 (479)
246 2jjq_A Uncharacterized RNA met 99.1 3.9E-10 1.3E-14 100.8 12.1 103 22-136 280-387 (425)
247 2xyq_A Putative 2'-O-methyl tr 99.1 2.3E-10 8E-15 96.9 10.0 105 31-153 61-187 (290)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3.8E-10 1.3E-14 101.3 10.9 108 22-135 273-388 (433)
249 2f8l_A Hypothetical protein LM 99.1 3.1E-10 1.1E-14 98.8 9.9 96 33-136 130-256 (344)
250 1sqg_A SUN protein, FMU protei 99.1 2.7E-10 9.2E-15 102.1 9.1 100 32-138 245-376 (429)
251 3bt7_A TRNA (uracil-5-)-methyl 99.1 7.5E-10 2.6E-14 97.3 10.6 121 21-149 200-339 (369)
252 3m6w_A RRNA methylase; rRNA me 99.0 3.4E-10 1.2E-14 101.9 8.4 100 32-138 100-231 (464)
253 3m4x_A NOL1/NOP2/SUN family pr 99.0 4.7E-10 1.6E-14 100.8 8.9 100 32-138 104-236 (456)
254 3tqs_A Ribosomal RNA small sub 99.0 6E-10 2E-14 92.9 7.6 83 21-110 15-107 (255)
255 2qfm_A Spermine synthase; sper 99.0 7E-10 2.4E-14 96.2 8.1 100 32-138 187-316 (364)
256 3fut_A Dimethyladenosine trans 99.0 7.5E-10 2.6E-14 93.0 8.0 85 21-112 33-123 (271)
257 2okc_A Type I restriction enzy 99.0 2.2E-09 7.6E-14 96.6 10.0 110 20-137 156-308 (445)
258 3evf_A RNA-directed RNA polyme 98.9 1.8E-09 6.3E-14 89.6 7.2 111 21-138 61-186 (277)
259 3k0b_A Predicted N6-adenine-sp 98.9 8.3E-09 2.8E-13 91.3 11.5 111 20-138 186-352 (393)
260 3ldu_A Putative methylase; str 98.9 6.5E-09 2.2E-13 91.8 10.6 111 20-138 180-346 (385)
261 2r6z_A UPF0341 protein in RSP 98.9 1.4E-09 4.7E-14 90.9 5.5 75 32-112 82-174 (258)
262 1m6e_X S-adenosyl-L-methionnin 98.9 7.5E-09 2.6E-13 90.0 9.6 102 32-137 50-210 (359)
263 3o4f_A Spermidine synthase; am 98.9 2.2E-08 7.6E-13 84.6 12.2 114 19-138 69-200 (294)
264 2efj_A 3,7-dimethylxanthine me 98.9 6.4E-09 2.2E-13 91.2 9.0 101 34-138 53-227 (384)
265 3ldg_A Putative uncharacterize 98.9 1.7E-08 5.8E-13 88.9 11.7 111 20-138 179-345 (384)
266 3ua3_A Protein arginine N-meth 98.8 4.3E-09 1.5E-13 97.8 7.8 120 3-133 380-531 (745)
267 1qyr_A KSGA, high level kasuga 98.8 4.2E-09 1.4E-13 87.6 6.6 83 21-108 7-99 (252)
268 3uzu_A Ribosomal RNA small sub 98.8 4.7E-09 1.6E-13 88.6 6.8 63 21-83 28-98 (279)
269 3ftd_A Dimethyladenosine trans 98.8 3.6E-08 1.2E-12 81.8 11.4 83 21-110 17-106 (249)
270 2ar0_A M.ecoki, type I restric 98.8 1.5E-08 5E-13 93.3 8.9 112 20-137 154-313 (541)
271 2oyr_A UPF0341 protein YHIQ; a 98.7 1E-08 3.5E-13 85.5 6.0 89 35-130 90-194 (258)
272 1m6y_A S-adenosyl-methyltransf 98.7 2.5E-08 8.5E-13 85.0 7.6 87 15-109 10-108 (301)
273 4gqb_A Protein arginine N-meth 98.7 7.8E-09 2.7E-13 96.0 4.6 118 3-133 325-464 (637)
274 4auk_A Ribosomal RNA large sub 98.7 1E-07 3.5E-12 82.7 10.8 88 31-129 209-296 (375)
275 3b5i_A S-adenosyl-L-methionine 98.7 3.1E-08 1.1E-12 86.7 7.6 101 34-138 53-227 (374)
276 3axs_A Probable N(2),N(2)-dime 98.7 4.3E-08 1.5E-12 86.4 8.4 94 33-136 52-158 (392)
277 2dul_A N(2),N(2)-dimethylguano 98.7 1.2E-07 3.9E-12 83.5 10.6 94 33-136 47-164 (378)
278 3cvo_A Methyltransferase-like 98.7 1.5E-07 5E-12 75.3 10.3 110 18-134 15-152 (202)
279 3gcz_A Polyprotein; flavivirus 98.6 2.3E-08 7.9E-13 83.2 5.3 111 21-138 77-203 (282)
280 3khk_A Type I restriction-modi 98.6 9.3E-08 3.2E-12 87.9 7.8 112 20-137 230-396 (544)
281 3ll7_A Putative methyltransfer 98.6 4.5E-08 1.6E-12 86.6 5.4 73 31-109 91-173 (410)
282 2k4m_A TR8_protein, UPF0146 pr 98.5 2.4E-07 8.1E-12 69.5 7.7 99 21-138 23-123 (153)
283 2b9e_A NOL1/NOP2/SUN domain fa 98.5 5.5E-07 1.9E-11 77.0 10.7 69 32-106 101-181 (309)
284 3s1s_A Restriction endonucleas 98.5 8E-07 2.7E-11 84.0 11.8 112 20-138 300-467 (878)
285 3v97_A Ribosomal RNA large sub 98.5 6.7E-07 2.3E-11 84.7 11.0 111 21-138 176-349 (703)
286 3lkd_A Type I restriction-modi 98.4 6.1E-07 2.1E-11 82.3 9.3 115 20-138 202-360 (542)
287 3eld_A Methyltransferase; flav 98.4 4.6E-07 1.6E-11 75.8 6.8 110 22-138 69-193 (300)
288 1wg8_A Predicted S-adenosylmet 98.3 5.8E-06 2E-10 69.1 10.2 91 15-109 6-99 (285)
289 2qy6_A UPF0209 protein YFCK; s 98.2 2E-06 7E-11 71.5 7.1 99 32-137 59-214 (257)
290 2zig_A TTHA0409, putative modi 98.2 2.1E-06 7.2E-11 73.0 6.4 59 15-73 216-275 (297)
291 3c6k_A Spermine synthase; sper 98.1 6.5E-06 2.2E-10 71.7 8.3 101 32-135 204-330 (381)
292 2px2_A Genome polyprotein [con 98.1 4E-06 1.4E-10 68.7 6.4 99 30-136 70-183 (269)
293 3lkz_A Non-structural protein 97.8 0.00011 3.7E-09 61.4 9.7 115 31-153 92-223 (321)
294 2wk1_A NOVP; transferase, O-me 97.7 0.00011 3.8E-09 61.7 8.5 99 32-137 105-245 (282)
295 3ufb_A Type I restriction-modi 97.7 0.00024 8.2E-09 65.1 11.4 116 20-137 202-363 (530)
296 4fzv_A Putative methyltransfer 97.7 0.00031 1.1E-08 61.0 11.3 100 32-138 147-286 (359)
297 2oo3_A Protein involved in cat 97.6 0.00015 5.2E-09 60.5 7.9 113 21-138 81-200 (283)
298 1g60_A Adenine-specific methyl 97.6 8.5E-05 2.9E-09 61.7 6.5 57 17-73 195-252 (260)
299 3p8z_A Mtase, non-structural p 97.6 0.00014 4.8E-09 58.8 7.2 114 31-153 76-205 (267)
300 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00049 1.7E-08 57.4 10.1 117 22-153 95-233 (344)
301 3tka_A Ribosomal RNA small sub 97.5 0.00051 1.7E-08 58.7 9.9 94 14-110 40-139 (347)
302 2dph_A Formaldehyde dismutase; 97.4 0.0011 3.7E-08 58.3 10.8 104 31-137 183-300 (398)
303 1i4w_A Mitochondrial replicati 97.4 0.00051 1.7E-08 59.5 8.2 54 34-87 59-117 (353)
304 2vz8_A Fatty acid synthase; tr 97.3 0.00012 4.2E-09 78.0 4.0 106 23-135 1229-1347(2512)
305 1kol_A Formaldehyde dehydrogen 97.2 0.0019 6.5E-08 56.8 10.5 104 31-137 183-301 (398)
306 1pqw_A Polyketide synthase; ro 97.1 0.0027 9.4E-08 49.9 9.6 98 31-136 36-137 (198)
307 3g7u_A Cytosine-specific methy 97.1 0.0022 7.4E-08 56.1 9.7 78 35-112 3-84 (376)
308 1f8f_A Benzyl alcohol dehydrog 97.1 0.0027 9.3E-08 55.2 9.7 99 31-137 188-290 (371)
309 3s2e_A Zinc-containing alcohol 97.0 0.0046 1.6E-07 53.0 10.1 99 31-138 164-265 (340)
310 3fpc_A NADP-dependent alcohol 96.8 0.0063 2.2E-07 52.4 9.7 100 31-137 164-267 (352)
311 3uog_A Alcohol dehydrogenase; 96.8 0.0055 1.9E-07 53.1 9.1 100 31-138 187-289 (363)
312 1pl8_A Human sorbitol dehydrog 96.8 0.008 2.7E-07 51.9 9.9 99 31-137 169-274 (356)
313 4ej6_A Putative zinc-binding d 96.7 0.011 3.7E-07 51.4 10.2 102 30-137 179-285 (370)
314 4b7c_A Probable oxidoreductase 96.7 0.0094 3.2E-07 50.9 9.6 98 31-137 147-249 (336)
315 3qwb_A Probable quinone oxidor 96.6 0.01 3.5E-07 50.7 9.8 99 31-137 146-248 (334)
316 1boo_A Protein (N-4 cytosine-s 96.6 0.0028 9.6E-08 54.2 5.9 57 18-74 236-293 (323)
317 1v3u_A Leukotriene B4 12- hydr 96.6 0.012 4.2E-07 50.1 9.9 98 31-137 143-245 (333)
318 3gms_A Putative NADPH:quinone 96.6 0.0082 2.8E-07 51.5 8.7 99 32-138 143-245 (340)
319 4dvj_A Putative zinc-dependent 96.6 0.017 5.9E-07 50.0 10.7 95 33-135 171-269 (363)
320 3jyn_A Quinone oxidoreductase; 96.6 0.01 3.6E-07 50.4 9.2 100 31-138 138-241 (325)
321 1e3j_A NADP(H)-dependent ketos 96.5 0.016 5.6E-07 49.8 10.4 100 31-137 166-272 (352)
322 2dq4_A L-threonine 3-dehydroge 96.5 0.0095 3.2E-07 51.1 8.5 96 33-137 164-263 (343)
323 1uuf_A YAHK, zinc-type alcohol 96.5 0.0062 2.1E-07 53.0 7.3 96 30-137 191-289 (369)
324 1rjw_A ADH-HT, alcohol dehydro 96.5 0.019 6.4E-07 49.2 10.3 100 30-138 161-263 (339)
325 3jv7_A ADH-A; dehydrogenase, n 96.5 0.018 6.2E-07 49.4 10.2 102 30-138 168-272 (345)
326 3ip1_A Alcohol dehydrogenase, 96.5 0.027 9.3E-07 49.4 11.5 102 31-138 211-320 (404)
327 1vj0_A Alcohol dehydrogenase, 96.4 0.011 3.7E-07 51.6 8.7 100 31-137 193-299 (380)
328 2d8a_A PH0655, probable L-thre 96.4 0.014 4.7E-07 50.2 9.3 98 33-137 167-268 (348)
329 3two_A Mannitol dehydrogenase; 96.4 0.0084 2.9E-07 51.5 7.8 93 30-138 173-267 (348)
330 1yb5_A Quinone oxidoreductase; 96.4 0.018 6.2E-07 49.6 9.7 99 31-137 168-270 (351)
331 3uko_A Alcohol dehydrogenase c 96.3 0.028 9.6E-07 48.8 10.6 98 32-137 192-296 (378)
332 1p0f_A NADP-dependent alcohol 96.3 0.029 9.8E-07 48.7 10.3 99 31-137 189-294 (373)
333 2j3h_A NADP-dependent oxidored 96.3 0.023 7.9E-07 48.6 9.6 98 31-137 153-256 (345)
334 1eg2_A Modification methylase 96.2 0.0064 2.2E-07 51.9 6.0 57 18-74 226-286 (319)
335 3fbg_A Putative arginate lyase 96.2 0.027 9.2E-07 48.3 9.9 96 33-136 150-248 (346)
336 1cdo_A Alcohol dehydrogenase; 96.2 0.03 1E-06 48.5 10.1 100 31-138 190-296 (374)
337 2hcy_A Alcohol dehydrogenase 1 96.2 0.015 5E-07 50.0 7.9 99 31-137 167-270 (347)
338 2jhf_A Alcohol dehydrogenase E 96.1 0.037 1.3E-06 48.0 10.4 99 31-137 189-294 (374)
339 1qor_A Quinone oxidoreductase; 96.1 0.018 6.3E-07 48.9 8.3 99 31-137 138-240 (327)
340 2eih_A Alcohol dehydrogenase; 96.1 0.023 7.8E-07 48.7 8.9 99 31-137 164-266 (343)
341 4dup_A Quinone oxidoreductase; 96.1 0.018 6.1E-07 49.6 8.2 97 32-137 166-266 (353)
342 1e3i_A Alcohol dehydrogenase, 96.1 0.032 1.1E-06 48.4 9.8 99 31-137 193-298 (376)
343 4a2c_A Galactitol-1-phosphate 96.1 0.091 3.1E-06 44.8 12.5 101 31-138 158-262 (346)
344 2fzw_A Alcohol dehydrogenase c 96.0 0.034 1.2E-06 48.1 9.5 99 31-137 188-293 (373)
345 2h6e_A ADH-4, D-arabinose 1-de 96.0 0.018 6.2E-07 49.3 7.6 99 30-137 168-270 (344)
346 2c0c_A Zinc binding alcohol de 96.0 0.042 1.4E-06 47.5 9.8 98 31-137 161-262 (362)
347 4eye_A Probable oxidoreductase 95.9 0.019 6.5E-07 49.2 7.4 97 32-137 158-258 (342)
348 1g55_A DNA cytosine methyltran 95.8 0.017 5.9E-07 49.7 6.8 87 35-126 3-106 (343)
349 2j8z_A Quinone oxidoreductase; 95.8 0.035 1.2E-06 47.8 8.7 99 31-137 160-262 (354)
350 1jvb_A NAD(H)-dependent alcoho 95.8 0.029 1E-06 48.1 8.1 101 30-137 167-272 (347)
351 1wly_A CAAR, 2-haloacrylate re 95.7 0.034 1.2E-06 47.4 8.2 99 31-137 143-245 (333)
352 3m6i_A L-arabinitol 4-dehydrog 95.7 0.058 2E-06 46.5 9.8 100 31-138 177-285 (363)
353 4eez_A Alcohol dehydrogenase 1 95.7 0.071 2.4E-06 45.5 10.3 101 31-138 161-265 (348)
354 2b5w_A Glucose dehydrogenase; 95.7 0.051 1.7E-06 46.8 9.3 93 35-137 174-274 (357)
355 1rjd_A PPM1P, carboxy methyl t 95.7 0.16 5.5E-06 43.5 12.3 103 32-138 96-234 (334)
356 2zb4_A Prostaglandin reductase 95.5 0.074 2.5E-06 45.7 9.7 98 31-137 156-261 (357)
357 1piw_A Hypothetical zinc-type 95.4 0.014 4.6E-07 50.5 4.5 98 31-137 177-277 (360)
358 3goh_A Alcohol dehydrogenase, 95.3 0.019 6.5E-07 48.5 5.2 87 32-136 141-229 (315)
359 1iz0_A Quinone oxidoreductase; 95.3 0.038 1.3E-06 46.3 6.8 94 31-137 123-219 (302)
360 3krt_A Crotonyl COA reductase; 95.2 0.085 2.9E-06 47.1 9.3 99 31-137 226-345 (456)
361 3nx4_A Putative oxidoreductase 95.2 0.063 2.1E-06 45.4 8.0 92 36-138 149-243 (324)
362 3gaz_A Alcohol dehydrogenase s 95.2 0.078 2.7E-06 45.3 8.6 96 32-137 149-247 (343)
363 2qrv_A DNA (cytosine-5)-methyl 95.1 0.073 2.5E-06 44.8 8.1 74 33-110 15-94 (295)
364 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.033 1.1E-06 48.0 6.1 94 33-137 180-276 (357)
365 3qv2_A 5-cytosine DNA methyltr 94.9 0.098 3.4E-06 44.6 8.5 88 33-126 9-117 (327)
366 3tos_A CALS11; methyltransfera 94.9 0.2 6.9E-06 41.1 10.0 118 32-155 68-235 (257)
367 1xa0_A Putative NADPH dependen 94.8 0.071 2.4E-06 45.2 7.3 98 31-137 146-247 (328)
368 2c7p_A Modification methylase 94.8 0.11 3.6E-06 44.4 8.3 69 34-110 11-82 (327)
369 1yqd_A Sinapyl alcohol dehydro 94.7 0.066 2.2E-06 46.3 7.0 95 33-138 187-284 (366)
370 2py6_A Methyltransferase FKBM; 94.7 0.048 1.6E-06 48.1 6.1 42 32-73 225-270 (409)
371 3gqv_A Enoyl reductase; medium 94.6 0.28 9.6E-06 42.3 10.7 96 32-136 163-263 (371)
372 4a0s_A Octenoyl-COA reductase/ 94.6 0.11 3.8E-06 46.1 8.3 98 31-137 218-337 (447)
373 4h0n_A DNMT2; SAH binding, tra 94.4 0.071 2.4E-06 45.7 6.3 87 35-126 4-107 (333)
374 3pi7_A NADH oxidoreductase; gr 94.2 0.098 3.4E-06 44.8 6.8 95 35-137 166-264 (349)
375 3tqh_A Quinone oxidoreductase; 94.2 0.25 8.4E-06 41.7 9.2 92 31-136 150-245 (321)
376 2vn8_A Reticulon-4-interacting 94.0 0.2 6.8E-06 43.3 8.5 98 31-137 181-281 (375)
377 2cdc_A Glucose dehydrogenase g 93.9 0.12 4.2E-06 44.5 6.9 93 34-137 181-279 (366)
378 1tt7_A YHFP; alcohol dehydroge 93.7 0.091 3.1E-06 44.5 5.7 98 31-137 147-248 (330)
379 3vyw_A MNMC2; tRNA wobble urid 93.6 0.053 1.8E-06 45.8 3.9 42 95-137 182-227 (308)
380 3ubt_Y Modification methylase 93.6 0.2 6.8E-06 42.5 7.6 69 36-110 2-72 (331)
381 3ps9_A TRNA 5-methylaminomethy 93.4 0.24 8.1E-06 46.5 8.5 105 33-138 66-221 (676)
382 3fwz_A Inner membrane protein 93.4 0.91 3.1E-05 33.1 10.0 95 34-134 7-103 (140)
383 2zig_A TTHA0409, putative modi 93.3 0.047 1.6E-06 45.8 3.2 55 75-136 20-97 (297)
384 2uyo_A Hypothetical protein ML 92.8 0.83 2.8E-05 38.5 10.1 100 35-136 104-218 (310)
385 3pvc_A TRNA 5-methylaminomethy 92.0 0.43 1.5E-05 44.8 8.1 104 33-137 58-212 (689)
386 1lss_A TRK system potassium up 91.9 2.2 7.4E-05 30.4 10.4 94 35-134 5-100 (140)
387 3ggo_A Prephenate dehydrogenas 91.9 1.9 6.4E-05 36.3 11.3 89 35-134 34-126 (314)
388 3me5_A Cytosine-specific methy 91.7 0.59 2E-05 42.0 8.3 78 35-112 89-182 (482)
389 3llv_A Exopolyphosphatase-rela 91.4 1.2 4.2E-05 32.2 8.5 72 34-108 6-79 (141)
390 3c85_A Putative glutathione-re 90.9 3 0.0001 31.6 10.8 96 34-135 39-138 (183)
391 1boo_A Protein (N-4 cytosine-s 90.6 0.2 6.7E-06 42.6 3.8 42 95-137 29-85 (323)
392 2g1u_A Hypothetical protein TM 90.2 2.2 7.6E-05 31.5 9.1 75 32-108 17-93 (155)
393 1zsy_A Mitochondrial 2-enoyl t 89.9 0.88 3E-05 38.9 7.5 99 31-136 165-270 (357)
394 3ce6_A Adenosylhomocysteinase; 89.3 1.8 6E-05 39.0 9.1 92 31-139 271-364 (494)
395 4e21_A 6-phosphogluconate dehy 89.1 1.3 4.4E-05 38.1 7.9 90 34-134 22-113 (358)
396 4a27_A Synaptic vesicle membra 88.9 0.82 2.8E-05 38.9 6.5 96 31-137 140-239 (349)
397 2vhw_A Alanine dehydrogenase; 88.8 0.24 8.1E-06 43.1 3.0 97 33-136 167-268 (377)
398 3l9w_A Glutathione-regulated p 88.7 4.4 0.00015 35.5 11.2 95 34-134 4-100 (413)
399 4dio_A NAD(P) transhydrogenase 88.6 0.85 2.9E-05 40.0 6.4 98 33-135 189-311 (405)
400 3iup_A Putative NADPH:quinone 88.6 0.59 2E-05 40.4 5.4 74 32-106 169-247 (379)
401 2eez_A Alanine dehydrogenase; 88.0 0.33 1.1E-05 42.0 3.4 97 33-136 165-266 (369)
402 1h2b_A Alcohol dehydrogenase; 88.0 2.2 7.7E-05 36.3 8.7 99 30-137 183-286 (359)
403 4e12_A Diketoreductase; oxidor 88.0 1.3 4.3E-05 36.6 6.9 88 35-133 5-118 (283)
404 1gu7_A Enoyl-[acyl-carrier-pro 87.8 0.91 3.1E-05 38.8 6.1 100 31-137 164-276 (364)
405 3slk_A Polyketide synthase ext 87.7 0.83 2.8E-05 43.7 6.2 97 32-138 344-444 (795)
406 2g5c_A Prephenate dehydrogenas 87.7 4 0.00014 33.3 9.8 87 36-134 3-94 (281)
407 3p2y_A Alanine dehydrogenase/p 87.6 0.54 1.9E-05 40.9 4.5 100 33-134 183-300 (381)
408 3gg2_A Sugar dehydrogenase, UD 87.2 3.6 0.00012 36.5 9.8 39 35-73 3-43 (450)
409 3ojo_A CAP5O; rossmann fold, c 87.0 6.1 0.00021 34.8 11.0 101 32-134 9-127 (431)
410 1pjc_A Protein (L-alanine dehy 86.8 0.63 2.2E-05 40.1 4.5 98 34-138 167-269 (361)
411 1g60_A Adenine-specific methyl 86.6 0.52 1.8E-05 38.5 3.7 41 95-136 19-74 (260)
412 1x13_A NAD(P) transhydrogenase 86.4 1 3.6E-05 39.4 5.7 99 33-136 171-292 (401)
413 3l4b_C TRKA K+ channel protien 86.4 5.7 0.0002 31.0 9.7 92 36-134 2-97 (218)
414 3d4o_A Dipicolinate synthase s 86.2 6.3 0.00022 32.5 10.3 90 33-137 154-245 (293)
415 2f1k_A Prephenate dehydrogenas 85.9 5 0.00017 32.6 9.5 85 36-133 2-88 (279)
416 1eg2_A Modification methylase 85.9 0.64 2.2E-05 39.4 3.9 42 95-137 54-107 (319)
417 4g65_A TRK system potassium up 85.7 1.3 4.3E-05 39.6 6.0 69 34-106 3-75 (461)
418 1zkd_A DUF185; NESG, RPR58, st 85.6 3.1 0.0001 36.2 8.1 40 33-72 80-128 (387)
419 2rir_A Dipicolinate synthase, 85.5 5.7 0.0002 32.9 9.7 90 33-137 156-247 (300)
420 1id1_A Putative potassium chan 85.3 8.9 0.00031 27.9 10.3 93 35-134 4-103 (153)
421 3ic5_A Putative saccharopine d 85.2 3.7 0.00013 28.1 7.2 71 34-108 5-78 (118)
422 1mv8_A GMD, GDP-mannose 6-dehy 85.1 5.8 0.0002 34.8 10.0 38 36-73 2-41 (436)
423 3dmg_A Probable ribosomal RNA 84.4 3.9 0.00013 35.4 8.4 113 16-139 27-142 (381)
424 3swr_A DNA (cytosine-5)-methyl 84.2 2.8 9.5E-05 41.1 7.9 80 33-112 539-631 (1002)
425 2vz8_A Fatty acid synthase; tr 83.9 3.3 0.00011 44.7 9.0 98 31-136 1665-1770(2512)
426 2aef_A Calcium-gated potassium 83.3 5.2 0.00018 31.6 8.2 92 33-134 8-103 (234)
427 3grk_A Enoyl-(acyl-carrier-pro 83.0 8.2 0.00028 31.7 9.6 103 33-136 30-169 (293)
428 4eso_A Putative oxidoreductase 82.9 4.7 0.00016 32.4 7.8 103 33-136 7-138 (255)
429 1l7d_A Nicotinamide nucleotide 82.8 1 3.6E-05 39.0 4.1 99 33-136 171-294 (384)
430 2y0c_A BCEC, UDP-glucose dehyd 82.8 7.9 0.00027 34.6 9.9 43 32-74 6-50 (478)
431 3pid_A UDP-glucose 6-dehydroge 82.6 12 0.00039 33.1 10.7 105 34-151 36-168 (432)
432 1zcj_A Peroxisomal bifunctiona 82.2 5.4 0.00018 35.4 8.6 89 35-134 38-148 (463)
433 2dpo_A L-gulonate 3-dehydrogen 82.2 3.6 0.00012 34.7 7.1 38 35-72 7-46 (319)
434 1f0y_A HCDH, L-3-hydroxyacyl-C 82.0 3.1 0.00011 34.5 6.6 37 35-71 16-54 (302)
435 4a7p_A UDP-glucose dehydrogena 81.8 7.8 0.00027 34.3 9.4 115 33-151 7-144 (446)
436 3d1l_A Putative NADP oxidoredu 81.6 5 0.00017 32.4 7.6 87 35-134 11-100 (266)
437 3c24_A Putative oxidoreductase 81.5 4.4 0.00015 33.2 7.3 84 35-133 12-98 (286)
438 2hwk_A Helicase NSP2; rossman 81.4 0.88 3E-05 37.7 2.8 91 41-138 149-256 (320)
439 3f9i_A 3-oxoacyl-[acyl-carrier 81.3 5.2 0.00018 31.7 7.6 78 32-109 12-94 (249)
440 2ew2_A 2-dehydropantoate 2-red 81.1 8 0.00027 31.7 8.9 97 35-135 4-107 (316)
441 3hwr_A 2-dehydropantoate 2-red 80.3 7.9 0.00027 32.3 8.6 108 33-150 18-133 (318)
442 3oig_A Enoyl-[acyl-carrier-pro 80.2 12 0.0004 30.0 9.4 103 33-136 6-147 (266)
443 2ag5_A DHRS6, dehydrogenase/re 79.8 4.1 0.00014 32.4 6.4 76 34-109 6-84 (246)
444 1cyd_A Carbonyl reductase; sho 79.7 12 0.0004 29.4 9.2 77 33-109 6-86 (244)
445 3h2s_A Putative NADH-flavin re 79.1 18 0.00063 27.7 10.0 93 36-135 2-103 (224)
446 1bg6_A N-(1-D-carboxylethyl)-L 79.1 7.5 0.00026 32.7 8.2 94 35-134 5-107 (359)
447 3rd5_A Mypaa.01249.C; ssgcid, 79.0 9.1 0.00031 31.3 8.5 77 33-109 15-96 (291)
448 2hmt_A YUAA protein; RCK, KTN, 76.8 8.3 0.00028 27.3 6.8 95 34-134 6-102 (144)
449 3g79_A NDP-N-acetyl-D-galactos 76.7 20 0.00068 32.0 10.4 97 32-134 16-145 (478)
450 2km1_A Protein DRE2; yeast, an 76.6 2.2 7.5E-05 31.2 3.4 56 93-154 53-111 (136)
451 3d3w_A L-xylulose reductase; u 76.5 17 0.00058 28.5 9.2 77 33-109 6-86 (244)
452 3mog_A Probable 3-hydroxybutyr 76.3 7.2 0.00025 34.9 7.5 88 35-134 6-118 (483)
453 3k31_A Enoyl-(acyl-carrier-pro 76.3 12 0.0004 30.8 8.4 103 33-136 29-168 (296)
454 3tri_A Pyrroline-5-carboxylate 76.3 13 0.00046 30.3 8.7 86 35-133 4-95 (280)
455 3ruf_A WBGU; rossmann fold, UD 76.3 8 0.00027 32.3 7.5 88 18-109 9-110 (351)
456 4ft4_B DNA (cytosine-5)-methyl 75.8 5.8 0.0002 37.7 7.1 51 33-83 211-269 (784)
457 1hxh_A 3BETA/17BETA-hydroxyste 75.5 16 0.00053 29.1 8.8 76 34-109 6-90 (253)
458 2o3j_A UDP-glucose 6-dehydroge 75.1 26 0.00089 31.1 10.8 39 35-73 10-52 (481)
459 3b1f_A Putative prephenate deh 74.8 16 0.00055 29.7 8.8 87 35-133 7-98 (290)
460 4b79_A PA4098, probable short- 74.6 4.1 0.00014 32.9 4.9 102 33-135 10-132 (242)
461 4dll_A 2-hydroxy-3-oxopropiona 74.1 13 0.00044 31.0 8.2 91 33-136 30-124 (320)
462 1xhl_A Short-chain dehydrogena 74.1 9.1 0.00031 31.5 7.2 77 33-109 25-116 (297)
463 3gvp_A Adenosylhomocysteinase 73.9 7.7 0.00026 34.2 6.8 90 33-139 219-310 (435)
464 2h78_A Hibadh, 3-hydroxyisobut 73.6 7.1 0.00024 32.1 6.4 87 35-134 4-95 (302)
465 3trk_A Nonstructural polyprote 73.5 1 3.6E-05 36.9 1.1 40 98-138 210-261 (324)
466 3gt0_A Pyrroline-5-carboxylate 73.5 2.7 9.1E-05 33.8 3.6 85 36-133 4-94 (247)
467 3nyw_A Putative oxidoreductase 73.3 14 0.00047 29.5 7.9 77 33-109 6-97 (250)
468 3ioy_A Short-chain dehydrogena 73.0 15 0.0005 30.6 8.3 77 33-109 7-97 (319)
469 3ado_A Lambda-crystallin; L-gu 72.8 4.7 0.00016 34.0 5.0 41 33-73 5-47 (319)
470 4imr_A 3-oxoacyl-(acyl-carrier 72.7 11 0.00036 30.7 7.2 77 33-109 32-119 (275)
471 3guy_A Short-chain dehydrogena 72.7 31 0.0011 26.7 12.0 74 36-109 3-82 (230)
472 3qha_A Putative oxidoreductase 72.7 7.7 0.00026 32.0 6.3 88 35-136 16-105 (296)
473 1lnq_A MTHK channels, potassiu 72.3 15 0.00052 30.7 8.2 89 34-134 115-209 (336)
474 3k6j_A Protein F01G10.3, confi 72.2 18 0.00062 32.1 8.9 88 35-134 55-164 (460)
475 3pxx_A Carveol dehydrogenase; 72.1 24 0.00083 28.4 9.3 103 33-136 9-153 (287)
476 3gem_A Short chain dehydrogena 72.0 3.8 0.00013 33.2 4.2 78 33-110 26-110 (260)
477 3g0o_A 3-hydroxyisobutyrate de 71.8 40 0.0014 27.6 10.9 89 34-134 7-100 (303)
478 3ged_A Short-chain dehydrogena 71.3 16 0.00055 29.4 7.8 75 35-109 3-85 (247)
479 2gdz_A NAD+-dependent 15-hydro 71.1 27 0.00094 27.8 9.3 77 34-110 7-97 (267)
480 4hp8_A 2-deoxy-D-gluconate 3-d 70.9 36 0.0012 27.3 9.8 77 33-110 8-90 (247)
481 3av4_A DNA (cytosine-5)-methyl 70.7 11 0.00038 38.1 7.8 80 33-112 850-942 (1330)
482 1txg_A Glycerol-3-phosphate de 70.5 20 0.00068 29.7 8.6 89 36-134 2-102 (335)
483 1dlj_A UDP-glucose dehydrogena 70.2 19 0.00064 31.2 8.5 37 36-73 2-40 (402)
484 4f3n_A Uncharacterized ACR, CO 70.1 3.1 0.0001 36.7 3.4 37 34-70 138-181 (432)
485 3r6d_A NAD-dependent epimerase 69.8 8.6 0.00029 29.8 5.7 93 35-134 6-105 (221)
486 4gx0_A TRKA domain protein; me 69.4 9.2 0.00032 34.7 6.6 68 34-105 127-198 (565)
487 3v2g_A 3-oxoacyl-[acyl-carrier 69.2 25 0.00087 28.3 8.7 118 18-136 14-165 (271)
488 3e9n_A Putative short-chain de 69.0 14 0.00048 29.1 7.0 76 34-110 5-86 (245)
489 4fgs_A Probable dehydrogenase 69.0 20 0.00069 29.3 8.0 101 33-134 28-157 (273)
490 4gbj_A 6-phosphogluconate dehy 68.8 4.2 0.00014 33.8 3.9 99 36-150 7-111 (297)
491 1vpd_A Tartronate semialdehyde 68.7 11 0.00038 30.8 6.5 87 35-134 6-97 (299)
492 3ek2_A Enoyl-(acyl-carrier-pro 68.7 17 0.00059 28.9 7.6 77 33-109 13-102 (271)
493 3ond_A Adenosylhomocysteinase; 68.5 24 0.00083 31.5 8.8 87 33-136 264-352 (488)
494 3zwc_A Peroxisomal bifunctiona 68.4 16 0.00055 34.6 8.1 87 35-134 317-427 (742)
495 4e2x_A TCAB9; kijanose, tetron 68.3 18 0.0006 31.2 8.0 97 22-134 307-408 (416)
496 3e8x_A Putative NAD-dependent 68.2 29 0.001 26.9 8.7 70 33-110 20-95 (236)
497 3mag_A VP39; methylated adenin 67.9 18 0.00063 30.0 7.3 77 33-140 60-142 (307)
498 3abi_A Putative uncharacterize 67.4 8.7 0.0003 32.7 5.7 70 33-107 15-85 (365)
499 1zk4_A R-specific alcohol dehy 66.9 39 0.0013 26.3 9.3 76 34-109 6-92 (251)
500 4g81_D Putative hexonate dehyd 66.8 17 0.00057 29.5 7.0 78 33-110 8-97 (255)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=100.00 E-value=4.5e-49 Score=331.71 Aligned_cols=245 Identities=27% Similarity=0.516 Sum_probs=212.6
Q ss_pred hhhHHHHHHHHhhCCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeC
Q 037961 3 ELFIKQANLYAVARPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLT 82 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 82 (262)
++|++.|+.|+++||.||++++++|....+...+|||||||+|.++..|++++.+|+|+|+|+.|++.|++.+++.+.++
T Consensus 9 d~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~ 88 (257)
T 4hg2_A 9 DHFTPVADAYRAFRPRYPRALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVA 88 (257)
T ss_dssp -----------CCCCCCCHHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEEC
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehh
Confidence 67999999999999999999999999999888899999999999999999999999999999999999999999999986
Q ss_pred CCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcccccCCCCCCc
Q 037961 83 PTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKPFDTIDCNPFW 162 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (262)
+ ++++++++++||+|++++++||+|++++++++.|+|| |||+|++|.+......+.++.++.+++...+.++|
T Consensus 89 ~------~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T 4hg2_A 89 P------AEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVAR-PGAVFAAVTYGLTRVDPEVDAVVDRLYHGLLARDW 161 (257)
T ss_dssp C------TTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEE-EEEEEEEEEECCCBCCHHHHHHHHHHHHTTTGGGC
T ss_pred h------hhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcC-CCCEEEEEECCCCCCCHHHHHHHHHHHhccccccc
Confidence 5 7788899999999999999999999999999999999 99999999988777778888888888777788999
Q ss_pred cccchhHHhcCCCCCCCCCCCCCCCCCCCCcceeEeEeecHHHHHHHHhhhhHHHHHHHhCCccchHHHHHHHHHHhccC
Q 037961 163 APQRKLVDKKYMSIDFPFEPVDGYENTGPFDQFVVEKMMDLDDYFKFIRSCSAYQKAKDKGVELLTENVMEKFKAAWNED 242 (262)
Q Consensus 163 ~~~~~~~~~~~~~~~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 242 (262)
.+.+.++++.|+++.+||.+++.. .+.++..+|++++++|++|+|+|+.+.++....+.+++.+.|.+.|+..
T Consensus 162 ~~~~~~~~~~y~~l~~pf~~~~~~-------~~~~~~~~tl~~~~~~l~T~S~~~~~~~~~~~d~l~~~~~~l~~~~g~~ 234 (257)
T 4hg2_A 162 PPERVHVESGYRTLPFPFPELEAP-------PLEIEERWPMDAFLGYLGTWSAVTAHRRRTGADPLAEIAPALRAAWGTP 234 (257)
T ss_dssp CSCCHHHHTTTTTSCCCSCEECCC-------CCEEEEEECHHHHHHHHTTSHHHHHHHHHHSSCHHHHHHHHHHHHHSST
T ss_pred chhhhHHHhhhhhCCCCCccceee-------EEEEEEEecHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHhcCCC
Confidence 999999999999999999877532 6788899999999999999999999988765556666999999999875
Q ss_pred CCCeEEEEEeEEEEEEEeCC
Q 037961 243 GQSQKIARFRVYLRIGKVGN 262 (262)
Q Consensus 243 ~~~~~~~~~~~~~~~~rk~~ 262 (262)
. ..+++.|++++.+||++|
T Consensus 235 ~-~~~~v~~pi~l~~Grv~p 253 (257)
T 4hg2_A 235 E-RPLRVTWPIAIRAGRILP 253 (257)
T ss_dssp T-SCEEEEEEEEEEEEESSC
T ss_pred C-cEEEEEEEEEEEEEEECc
Confidence 4 478999999999999875
No 2
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-35 Score=251.72 Aligned_cols=246 Identities=20% Similarity=0.415 Sum_probs=195.0
Q ss_pred HHHHHHhhCCCChHHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHH---hhCCeEEEEcCCHHHHHHHhc--------CC
Q 037961 8 QANLYAVARPNYPKELFKLIASKT-PKRNLAWDVGTRSGQAAASLA---QIYQHVIATDTSPKQLKFAIK--------LP 75 (262)
Q Consensus 8 ~a~~Y~~~rp~yp~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~---~~~~~v~~vD~s~~~~~~a~~--------~~ 75 (262)
.++.|+++||.||+++++.|.... +++.+|||+|||+|..+..++ ..+.+|+|+|+|+.|++.|++ ..
T Consensus 10 ~~~~y~~~rp~y~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 89 (299)
T 3g5t_A 10 NSERYSSSRPSYPSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYK 89 (299)
T ss_dssp CHHHHHHHSCCCCHHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCT
T ss_pred ChHHHhhcCCCCCHHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCC
Confidence 578999999999999999999886 478899999999999999999 457899999999999999975 35
Q ss_pred CceEEeCCCCchhhhhhccCCC------CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcc--cHHHH
Q 037961 76 NIRYQLTPTMSITELEQNVATQ------SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEI--NESVG 147 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~------~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~--~~~~~ 147 (262)
++.+.+++ ++++++++ ++||+|+++.++||+|+..+++++.++|| |||.|+++.+..+.+ .+.+.
T Consensus 90 ~v~~~~~d------~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~ 162 (299)
T 3g5t_A 90 NVSFKISS------SDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLR-KDGTIAIWGYADPIFPDYPEFD 162 (299)
T ss_dssp TEEEEECC------TTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEE-EEEEEEEEEEEEEECTTCGGGT
T ss_pred ceEEEEcC------HHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcC-CCcEEEEEecCCccccCcHHHH
Confidence 78888876 44444445 89999999999999999999999999999 999999977765433 23555
Q ss_pred HhhcccccC--CCCCCcc-ccchhHHhcCCCCCCC---CCCCCCCCCC------------CCCcceeEeEeecHHHHHHH
Q 037961 148 AVFKPFDTI--DCNPFWA-PQRKLVDKKYMSIDFP---FEPVDGYENT------------GPFDQFVVEKMMDLDDYFKF 209 (262)
Q Consensus 148 ~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~---f~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 209 (262)
.++.++... .+.++|. +.+..+.+.+++++|| |+++...... .....+.....++++++++|
T Consensus 163 ~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 3g5t_A 163 DLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADY 242 (299)
T ss_dssp THHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHH
T ss_pred HHHHHhccCcccccchhhchhhHHHHHhhhccCCChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHHH
Confidence 566665432 5678998 8888889999999988 3555311000 00113556888999999999
Q ss_pred HhhhhHHHHHHH--hCCc--cchHHHHHH-HHHHhccCCCCeEEEEEeEEEEEEEe
Q 037961 210 IRSCSAYQKAKD--KGVE--LLTENVMEK-FKAAWNEDGQSQKIARFRVYLRIGKV 260 (262)
Q Consensus 210 l~s~s~~~~~~~--~~~~--~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~rk 260 (262)
++|+|.|..+.+ ++.+ .+.+.++++ |.+..+-.....+.+.|++++++|||
T Consensus 243 l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~rk 298 (299)
T 3g5t_A 243 VRTWSAYHQWKQDPKNKDKEDVADWFIKESLRRRPELSTNTKIEVVWNTFYKLGKR 298 (299)
T ss_dssp HTTSHHHHHHHHCGGGTTSCCHHHHHHHHHHHHCTTCCTTCCEEEEEEEEEEEEEE
T ss_pred HHHhHHHHHHHhcccCCchhhHHHHHHHHHHHhccCCCCCCEEEEEecceeeeEec
Confidence 999999999988 6554 566668888 77744433223789999999999998
No 3
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.96 E-value=4.7e-28 Score=203.41 Aligned_cols=242 Identities=17% Similarity=0.142 Sum_probs=170.1
Q ss_pred ChhhhHHHHHHHHhhCCCChHHHHHHHHhh-------CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 1 MAELFIKQANLYAVARPNYPKELFKLIASK-------TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 1 ~~~~F~~~a~~Y~~~rp~yp~~~~~~l~~~-------~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
|+..|++.++.|++.+. ++....+.+... .+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++
T Consensus 1 m~~~~~~~a~~y~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 79 (263)
T 2yqz_A 1 MSSALLRAAYAYDRLRA-HPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQ 79 (263)
T ss_dssp -CHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHH
T ss_pred CCCchHHHHHHHhhhcc-cChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 78999999999999874 556555554433 3577899999999999999999999999999999999999875
Q ss_pred C-----CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEE-ecCC-Cc---c
Q 037961 74 L-----PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAW-TYTM-PE---I 142 (262)
Q Consensus 74 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~-~~~~-~~---~ 142 (262)
. +++.+..++ ++++++++++||+|++..++||+ |+..+++++.++|| |||.+++. .... .. +
T Consensus 80 ~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~ 152 (263)
T 2yqz_A 80 KIAGVDRKVQVVQAD------ARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLK-PGGALLEGWDQAEASPEWTL 152 (263)
T ss_dssp HTTTSCTTEEEEESC------TTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEEEEECCCHHHHH
T ss_pred HhhccCCceEEEEcc------cccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCC-CCcEEEEEecCCCccHHHHH
Confidence 3 578888765 56677788899999999999999 99999999999999 99999985 2221 11 1
Q ss_pred cHHHHHhhcccccCCCCCCcc-ccchhHHhcCCCCCCCCCCCCCCCCCCCCcceeEeEeecHHHHHHHHhhh--hHHHHH
Q 037961 143 NESVGAVFKPFDTIDCNPFWA-PQRKLVDKKYMSIDFPFEPVDGYENTGPFDQFVVEKMMDLDDYFKFIRSC--SAYQKA 219 (262)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~--s~~~~~ 219 (262)
...+.+++..+.. .....+. .....+.+.+.+.+ |+.+.. ....+....+.+++++++.+. +.+..+
T Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~G--f~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (263)
T 2yqz_A 153 QERWRAFAAEEGF-PVERGLHAKRLKEVEEALRRLG--LKPRTR-------EVARWREERTPREALEALSERLYSFTQGL 222 (263)
T ss_dssp HHHHHHHHHHHTC-CCCCCHHHHHHHHHHHHHHHTT--CCCEEE-------EEEEEEEEECHHHHHHHHHTTCSGGGSSS
T ss_pred HHHHHHHHHHhCC-CcccccccCCHHHHHHHHHHcC--CCcceE-------EEeeeecCCCHHHHHHHHHHhhcccccCC
Confidence 2334444433221 1000111 11223445555556 432221 144566778999999998743 433333
Q ss_pred HHhCCccchHHHHHHHHHHhccCCCCeEEEEEeEEEEEEEeC
Q 037961 220 KDKGVELLTENVMEKFKAAWNEDGQSQKIARFRVYLRIGKVG 261 (262)
Q Consensus 220 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~rk~ 261 (262)
.++..+.+.+++++.+.+.++... ..+.+.|.+++.+||||
T Consensus 223 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~rkp 263 (263)
T 2yqz_A 223 PEPVHARVMERLWAWAEAELGDLD-RPFPVEKRFLLRVSRLG 263 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSCTT-SCEEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcC-ccccccceeEEEeeecC
Confidence 344445556667777877776532 46899999999999997
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=6.4e-24 Score=180.27 Aligned_cols=232 Identities=16% Similarity=0.185 Sum_probs=144.0
Q ss_pred HHHHHhh---CCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-CCceEEeCCC
Q 037961 9 ANLYAVA---RPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-PNIRYQLTPT 84 (262)
Q Consensus 9 a~~Y~~~---rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~ 84 (262)
+..|++. .+.+.+.+++.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+..++
T Consensus 32 a~~y~~~~~~~~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d- 108 (279)
T 3ccf_A 32 ATLYQDKHSFVWQYGEDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVAD- 108 (279)
T ss_dssp ---------CCSSSCCHHHHHHC--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECC-
T ss_pred HHHHhhcchHHHHHHHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECC-
Confidence 4566552 2333344444442 24678999999999999999999899999999999999999864 678888765
Q ss_pred CchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCCCcc---cHHHHHhhccccc---CC
Q 037961 85 MSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTMPEI---NESVGAVFKPFDT---ID 157 (262)
Q Consensus 85 ~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~---~~~~~~~~~~~~~---~~ 157 (262)
++.+++ +++||+|++..++||+ |+..+++++.++|| |||.|++........ ...+...+..... ..
T Consensus 109 -----~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (279)
T 3ccf_A 109 -----ARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALK-SGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQA 181 (279)
T ss_dssp -----TTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGG
T ss_pred -----hhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcC-CCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccC
Confidence 555665 5789999999999999 99999999999999 999999855443222 1222222222211 00
Q ss_pred CCCCccccchhHHhcCCCCCCCCCCCCCCCCCCCCcceeEeEee--cHHHHHHHHhhhh--HHHHHHHhCCccchHHHHH
Q 037961 158 CNPFWAPQRKLVDKKYMSIDFPFEPVDGYENTGPFDQFVVEKMM--DLDDYFKFIRSCS--AYQKAKDKGVELLTENVME 233 (262)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~f~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~s~s--~~~~~~~~~~~~l~~~~~~ 233 (262)
..+........+.+.+.+.+ |+.+... .+.....+ +.+++..+++++. .+..+.++..+.+.+.+++
T Consensus 182 ~~~~~~~~~~~~~~~l~~aG--f~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (279)
T 3ccf_A 182 LNPWYFPSIGEYVNILEKQG--FDVTYAA-------LFNRPTTLAEGEFGMANWIQMFASAFLVGLTPDQQVQLIRKVEA 252 (279)
T ss_dssp GCCCCCCCHHHHHHHHHHHT--EEEEEEE-------EEECCEECSSGGGHHHHHHHHHCHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCceeCCCHHHHHHHHHHcC--CEEEEEE-------EecccccccCCHHHHHHHHHHhhHHHhccCCHHHHHHHHHHHHH
Confidence 01111111222334444444 3322210 11112222 4567788887763 2222223333455555666
Q ss_pred HHHHHhccCCCCeEEEEEeEEEEEEEeC
Q 037961 234 KFKAAWNEDGQSQKIARFRVYLRIGKVG 261 (262)
Q Consensus 234 ~l~~~~~~~~~~~~~~~~~~~~~~~rk~ 261 (262)
.+.+.+..++ .+..+|..++++|+||
T Consensus 253 ~~~~~~~~~g--~~~~~~~~~~v~a~Kp 278 (279)
T 3ccf_A 253 TLQDKLYHQE--SWTADYRRIRIVSIKA 278 (279)
T ss_dssp HHHHHHEETT--EEEECCEEEEEEEEEC
T ss_pred HHHhhccCCC--cEEEEEEEEEEEEecC
Confidence 6766655555 7899999999999997
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1e-22 Score=170.48 Aligned_cols=232 Identities=16% Similarity=0.183 Sum_probs=149.8
Q ss_pred HHHHHhhCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc-CCCceEEeCC
Q 037961 9 ANLYAVARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK-LPNIRYQLTP 83 (262)
Q Consensus 9 a~~Y~~~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~ 83 (262)
+..|++........ ...+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++ .+++.+..++
T Consensus 8 ~~~y~~~~~~~~~~-~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d 86 (259)
T 2p35_A 8 AQQYLKFEDERTRP-ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKAD 86 (259)
T ss_dssp CGGGBCCCCGGGHH-HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECC
T ss_pred HHHHHHHHHHHHHH-HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECC
Confidence 55676655444333 34455544 36688999999999999999987 8899999999999999986 4788888765
Q ss_pred CCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCCCc--ccHHHHHhhc-----cccc
Q 037961 84 TMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTMPE--INESVGAVFK-----PFDT 155 (262)
Q Consensus 84 ~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~--~~~~~~~~~~-----~~~~ 155 (262)
+++++ ++++||+|+++.++||+ |+..+++++.++|| |||.|++....... ....+.++.. ....
T Consensus 87 ------~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (259)
T 2p35_A 87 ------LATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLE-SGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFS 158 (259)
T ss_dssp ------TTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEE-EEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-
T ss_pred ------hhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcC-CCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhc
Confidence 55566 67899999999999999 99999999999999 99999985543211 1122222221 1111
Q ss_pred CC---CCCCccccchhHHhcCCCCCCCCCCCCCCCCCCCCcceeE-eEeecHHHHHHHHhhhhH--H-HHHHHhCCccch
Q 037961 156 ID---CNPFWAPQRKLVDKKYMSIDFPFEPVDGYENTGPFDQFVV-EKMMDLDDYFKFIRSCSA--Y-QKAKDKGVELLT 228 (262)
Q Consensus 156 ~~---~~~~~~~~~~~~~~~~~~~~~~f~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~s~--~-~~~~~~~~~~l~ 228 (262)
+. ..+++ ....+.+.+.+.+ |+ ++.. .... ....+.++++.++++.+. + ..+.++..+.+.
T Consensus 159 ~~~~~~~~~~--~~~~~~~~l~~aG--f~-v~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T 2p35_A 159 GGGLRRKPLP--PPSDYFNALSPKS--SR-VDVW-------HTVYNHPMKDADSIVEWVKGTGLRPYLAAAGEENREAFL 226 (259)
T ss_dssp ------CCCC--CHHHHHHHHGGGE--EE-EEEE-------EEEEEEEESCHHHHHHHHTTTTTTHHHHTTCGGGHHHHH
T ss_pred cccccccCCC--CHHHHHHHHHhcC--Cc-eEEE-------EEEeeeccCCchHHhhhhhcCcchHHHHhCCHHHHHHHH
Confidence 00 01111 1222344455545 32 1100 1111 122368889999987652 1 223333334455
Q ss_pred HHHHHHHHHHhccCCCCeEEEEEeEEEEEEEeC
Q 037961 229 ENVMEKFKAAWNEDGQSQKIARFRVYLRIGKVG 261 (262)
Q Consensus 229 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~rk~ 261 (262)
+++.+.+.+.+.....+.+.++|.+.+++|+||
T Consensus 227 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp 259 (259)
T 2p35_A 227 ADYTRRIAAAYPPMADGRLLLRFPRLFVVAVKK 259 (259)
T ss_dssp HHHHHHHHHHSCCCTTSCEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCCCCeEEEEeeeEEEEEecC
Confidence 556666766655322236899999999999996
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.89 E-value=1.6e-22 Score=169.74 Aligned_cols=229 Identities=16% Similarity=0.147 Sum_probs=136.4
Q ss_pred HHHHhhCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEe
Q 037961 10 NLYAVARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQL 81 (262)
Q Consensus 10 ~~Y~~~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~ 81 (262)
.-|...-..++..-++.+...+ .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+..
T Consensus 12 ~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~ 91 (260)
T 1vl5_A 12 HMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQ 91 (260)
T ss_dssp -----------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred eeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEE
Confidence 3444433333333344444433 4678999999999999999999989999999999999998753 5688887
Q ss_pred CCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCCCc--ccHHHHHhhcccccCCC
Q 037961 82 TPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTMPE--INESVGAVFKPFDTIDC 158 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~ 158 (262)
+| ++++++++++||+|+++.++||+ |+..+++++.++|| |||.|++.....+. ....+...+..+.....
T Consensus 92 ~d------~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
T 1vl5_A 92 GD------AEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLK-KGGQLLLVDNSAPENDAFDVFYNYVEKERDYSH 164 (260)
T ss_dssp CC------C-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTC
T ss_pred ec------HHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcC-CCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccc
Confidence 65 66677888999999999999999 99999999999999 99999985432221 11111111111111011
Q ss_pred CCCccccchhHHhcCCCCCCCCCCCCCCCCCCCCcceeEeEeecHHHHHHHHhhhhHHHHHHHhCCccchHHHHHHHHHH
Q 037961 159 NPFWAPQRKLVDKKYMSIDFPFEPVDGYENTGPFDQFVVEKMMDLDDYFKFIRSCSAYQKAKDKGVELLTENVMEKFKAA 238 (262)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~~~~~~l~~~~~~~l~~~ 238 (262)
.+.+.. ..+.+.+...+ |+.+. .......+++.++...+...+.......+. +.+ ..+.+.+.
T Consensus 165 ~~~~~~--~~~~~~l~~aG--f~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~ 227 (260)
T 1vl5_A 165 HRAWKK--SDWLKMLEEAG--FELEE---------LHCFHKTFIFEDWCDRMNVTTEKKQELSDF---IKS-KPTEYYQK 227 (260)
T ss_dssp CCCCBH--HHHHHHHHHHT--CEEEE---------EEEEEEEEEHHHHHHHTTCCHHHHHHHHHH---HHT-SCHHHHHH
T ss_pred cCCCCH--HHHHHHHHHCC--CeEEE---------EEEeeccCCHHHHHHhcCCCHHHHHHHHHH---HHh-CcHHHHHH
Confidence 122221 12233444444 33222 223344566777776665544322221111 111 12334444
Q ss_pred hcc-C-CCCeEEEEEeEEEEEEEeCC
Q 037961 239 WNE-D-GQSQKIARFRVYLRIGKVGN 262 (262)
Q Consensus 239 ~~~-~-~~~~~~~~~~~~~~~~rk~~ 262 (262)
+.. . .+..+.+++...+++|+||.
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~a~k~~ 253 (260)
T 1vl5_A 228 FKIVVEDGRVYSFRGESILMKARKPT 253 (260)
T ss_dssp TTCEEETTEEEEEEEEEEEEEEECCC
T ss_pred cceeccCCCcceEEeeEEEEEEEccc
Confidence 543 1 21137899999999999973
No 7
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.87 E-value=2.2e-21 Score=161.06 Aligned_cols=209 Identities=16% Similarity=0.150 Sum_probs=137.0
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
.+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+..++ ++.+++++++||+|+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~~~~~~fD~v~ 92 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGT------AESLPFPDDSFDIIT 92 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB------TTBCCSCTTCEEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecc------cccCCCCCCcEEEEE
Confidence 45778999999999999999999999999999999999988753 568888764 666777889999999
Q ss_pred EccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc---cccCCCCCCccccchhHHhcCCCCCCCC
Q 037961 105 IASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP---FDTIDCNPFWAPQRKLVDKKYMSIDFPF 180 (262)
Q Consensus 105 ~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~f 180 (262)
+..++||+ |+..+++++.++|| |||.+++.....+.. ......+.. .........+. ...+.+.+.+.+ |
T Consensus 93 ~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~aG--f 166 (239)
T 1xxl_A 93 CRYAAHHFSDVRKAVREVARVLK-QDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESS--LSEWQAMFSANQ--L 166 (239)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCB--HHHHHHHHHHTT--E
T ss_pred ECCchhhccCHHHHHHHHHHHcC-CCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCC--HHHHHHHHHHCC--C
Confidence 99999999 99999999999999 999999855433221 222222211 11101111221 122334444444 3
Q ss_pred CCCCCCCCCCCCcceeEeEeecHHHHHHHHhhhhHHHHHHHhCCccchHHHHHHHHHHhccCCCCeEEEEEeEEEEEEEe
Q 037961 181 EPVDGYENTGPFDQFVVEKMMDLDDYFKFIRSCSAYQKAKDKGVELLTENVMEKFKAAWNEDGQSQKIARFRVYLRIGKV 260 (262)
Q Consensus 181 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~rk 260 (262)
+.+. ...+...++..++++.+++.+............+.++.++.+...+. .++..+.+++...++.|.|
T Consensus 167 ~~~~---------~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~t~~~~~~~~~k 236 (239)
T 1xxl_A 167 AYQD---------IQKWNLPIQYDSWIKRGGTPADREKQIITHLNHASDEARDTFCITLN-QNGQPISFCLKAILIQGIK 236 (239)
T ss_dssp EEEE---------EEEEEEEEEHHHHHHHHTCCHHHHHHHHHHHHTCCHHHHHHTTCEEC-TTSCEEEEEEEEEEEEEEE
T ss_pred cEEE---------EEeecCccCHHHHHHHcCCCHHHHHHHHHHHHhCCHHHHHHhCeeec-CCCCceeEEeeeeehehhc
Confidence 3222 33445667788888888776654443333222233323333332111 2322368999999998887
Q ss_pred C
Q 037961 261 G 261 (262)
Q Consensus 261 ~ 261 (262)
.
T Consensus 237 ~ 237 (239)
T 1xxl_A 237 R 237 (239)
T ss_dssp C
T ss_pred c
Confidence 4
No 8
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=1.5e-20 Score=158.05 Aligned_cols=126 Identities=21% Similarity=0.294 Sum_probs=102.6
Q ss_pred hhHHHHHHHHhhCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEe
Q 037961 4 LFIKQANLYAVARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQL 81 (262)
Q Consensus 4 ~F~~~a~~Y~~~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 81 (262)
.|+..++.|++.++.++ .+.+.+.... +++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++..++.+..
T Consensus 4 ~y~~~a~~y~~~~~~~~-~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~ 82 (261)
T 3ege_A 4 IYNSIGKQYSQTRVPDI-RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFT 82 (261)
T ss_dssp ---------CCSBCCCH-HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEEC
T ss_pred HHHHHHHHHhhcccccH-HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEE
Confidence 68999999999999886 4666676665 57789999999999999999999999999999999999998877888887
Q ss_pred CCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 82 TPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++ ++++++++++||+|++..++||+ |+..+++++.++|| ||.+++..+.
T Consensus 83 ~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk--gG~~~~~~~~ 132 (261)
T 3ege_A 83 GY------AENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR--DGTIVLLTFD 132 (261)
T ss_dssp CC------TTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC--SSCEEEEEEC
T ss_pred Cc------hhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC--CcEEEEEEcC
Confidence 65 66677888999999999999999 99999999999998 8987775554
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=1.7e-19 Score=149.25 Aligned_cols=129 Identities=14% Similarity=0.202 Sum_probs=100.3
Q ss_pred hhhHHHHHHHHhhC-----CCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---
Q 037961 3 ELFIKQANLYAVAR-----PNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--- 74 (262)
Q Consensus 3 ~~F~~~a~~Y~~~r-----p~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--- 74 (262)
..|+..++.|++.. ......+.+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++.
T Consensus 18 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 97 (242)
T 3l8d_A 18 KKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG 97 (242)
T ss_dssp --------------CHHHHTSTTTTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB
T ss_pred HHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc
Confidence 45566666665422 2334567888888888899999999999999999999999999999999999999875
Q ss_pred CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 75 PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.++.+..++ +.++++++++||+|++..++||+ ++..+++++.++|+ |||.+++....
T Consensus 98 ~~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~ 155 (242)
T 3l8d_A 98 PDLSFIKGD------LSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK-SDGYACIAILG 155 (242)
T ss_dssp TTEEEEECB------TTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred CCceEEEcc------hhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC-CCeEEEEEEcC
Confidence 577887764 56667788999999999999999 89999999999999 99999986544
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.81 E-value=2.5e-19 Score=150.67 Aligned_cols=122 Identities=15% Similarity=0.268 Sum_probs=94.7
Q ss_pred HHHHHHH----hhCCCChHH--HHHHH-HhhCCCCCeEEEEcCcccHhHHHHHhh----CCeEEEEcCCHHHHHHHhcC-
Q 037961 7 KQANLYA----VARPNYPKE--LFKLI-ASKTPKRNLAWDVGTRSGQAAASLAQI----YQHVIATDTSPKQLKFAIKL- 74 (262)
Q Consensus 7 ~~a~~Y~----~~rp~yp~~--~~~~l-~~~~~~~~~vlDvGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~- 74 (262)
+.|+.|+ +.-|.|... ++..+ ..+++++.+|||+|||+|..+..+++. +++|+|+|+|+.|++.|+++
T Consensus 37 ~va~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~ 116 (261)
T 4gek_A 37 RVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI 116 (261)
T ss_dssp HHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHH
T ss_pred chhhhhhhhHhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHH
Confidence 4567775 345888532 22223 345688999999999999999999875 56899999999999999852
Q ss_pred ------CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCCh---hHHHHHHHHhhcCCCeEEEEEec
Q 037961 75 ------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFDL---PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 75 ------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~---~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+++++++| +.++++ ++||+|+++.++||+++ ..++++++|+|| |||+|++...
T Consensus 117 ~~~~~~~~v~~~~~D------~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~Lk-pGG~lii~e~ 179 (261)
T 4gek_A 117 DAYKAPTPVDVIEGD------IRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLN-PGGALVLSEK 179 (261)
T ss_dssp HTSCCSSCEEEEESC------TTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred HhhccCceEEEeecc------cccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcC-CCcEEEEEec
Confidence 367888765 555554 56999999999999943 358999999999 9999998544
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.79 E-value=3.9e-19 Score=144.42 Aligned_cols=124 Identities=21% Similarity=0.197 Sum_probs=104.9
Q ss_pred hhhHHHHHHHHhhCCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeC
Q 037961 3 ELFIKQANLYAVARPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLT 82 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 82 (262)
..|+..+..|...... ...+..+...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++..++.+..+
T Consensus 15 ~~~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 92 (211)
T 3e23_A 15 RFYRGNATAYAERQPR--SATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTM 92 (211)
T ss_dssp HHHHHSHHHHTTCCCC--CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEC
T ss_pred HHHHHHHHHHhhccch--hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEe
Confidence 5688888899886555 55566666777888899999999999999999999999999999999999987656777765
Q ss_pred CCCchhhhhhccCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 83 PTMSITELEQNVATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+ +..++ ++++||+|++..++|++ ++..+++++.++|| |||.+++..
T Consensus 93 d------~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 141 (211)
T 3e23_A 93 L------FHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALK-PGGLFYASY 141 (211)
T ss_dssp C------GGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred e------eccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 4 55666 68899999999999999 45679999999999 999999844
No 12
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.79 E-value=6.4e-19 Score=150.46 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCCeEEEEcCcccHhHHHHH----hh--CCe--EEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc----
Q 037961 33 KRNLAWDVGTRSGQAAASLA----QI--YQH--VIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN---- 93 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~----~~--~~~--v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~---- 93 (262)
++.+|||||||+|.++..++ .. ... ++|+|+|+.|++.|++. .++.+...+ ++++++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~ 127 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHK----ETSSEYQSRM 127 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEEC----SCHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEe----cchhhhhhhh
Confidence 45689999999998776443 33 233 39999999999988752 234443222 233333
Q ss_pred --cCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 94 --VATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 94 --~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++++++||+|++..++||+ |+.+++++++|+|| |||+|++....
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~ 174 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLG-TNAKMLIIVVS 174 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred ccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcC-CCcEEEEEEec
Confidence 2568899999999999999 99999999999999 99999985433
No 13
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.79 E-value=8.7e-19 Score=148.89 Aligned_cols=129 Identities=22% Similarity=0.317 Sum_probs=101.6
Q ss_pred hhhHHHHHHHHhhCCCChHHH---------HHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHh
Q 037961 3 ELFIKQANLYAVARPNYPKEL---------FKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp~~~---------~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (262)
+.|+..+..|++....++... +..++... +++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+
T Consensus 28 ~~fd~~a~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~ 107 (285)
T 4htf_A 28 RNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAK 107 (285)
T ss_dssp ----CHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred cchhhHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 578889999987766655422 22233333 45679999999999999999999999999999999999998
Q ss_pred cC-------CCceEEeCCCCchhhhhhcc-CCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 73 KL-------PNIRYQLTPTMSITELEQNV-ATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 73 ~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+. +++.+..++ +.+++ +++++||+|++..++||+ |+..+++++.++|| |||.+++....
T Consensus 108 ~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 175 (285)
T 4htf_A 108 QAAEAKGVSDNMQFIHCA------AQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLR-PGGVLSLMFYN 175 (285)
T ss_dssp HHHHC-CCGGGEEEEESC------GGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEB
T ss_pred HHHHhcCCCcceEEEEcC------HHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcC-CCeEEEEEEeC
Confidence 63 567788765 44444 567899999999999999 99999999999999 99999985544
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=1.6e-18 Score=146.21 Aligned_cols=109 Identities=21% Similarity=0.230 Sum_probs=92.2
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhh
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELE 91 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~ 91 (262)
.+.+.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++. .++.+..++ +.
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~~ 121 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYAD------AM 121 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC------TT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECc------cc
Confidence 3455566655 37789999999999999999885 78999999999999988753 357888765 56
Q ss_pred hccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 92 QNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++++++++||+|++..++||+ |+..+++++.++|| |||.+++...
T Consensus 122 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~ 167 (273)
T 3bus_A 122 DLPFEDASFDAVWALESLHHMPDRGRALREMARVLR-PGGTVAIADF 167 (273)
T ss_dssp SCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred cCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcC-CCeEEEEEEe
Confidence 667788899999999999999 89999999999999 9999998544
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=1e-18 Score=141.02 Aligned_cols=127 Identities=11% Similarity=0.161 Sum_probs=101.4
Q ss_pred hhhHHHHHHHHhhCCCC------hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc-CC
Q 037961 3 ELFIKQANLYAVARPNY------PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK-LP 75 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~y------p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~ 75 (262)
+.|+..+..|+...+.. ...++..+... .+.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++ .+
T Consensus 7 ~~y~~~a~~y~~~~~~~~~~~~~~~~~l~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~ 84 (203)
T 3h2b_A 7 KAYSSPTFDAEALLGTVISAEDPDRVLIEPWATG--VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHP 84 (203)
T ss_dssp HHHHCTTTCHHHHTCSSCCTTCTTHHHHHHHHHH--CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCT
T ss_pred HHHhhHHHHHHHHhhhhccccHHHHHHHHHHhcc--CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC
Confidence 56777777776543221 12334444333 26789999999999999999999999999999999999986 47
Q ss_pred CceEEeCCCCchhhhhhccCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 76 NIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++.+..++ +.++++++++||+|++..++|++ ++..+++++.++|| |||.+++....
T Consensus 85 ~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~ 143 (203)
T 3h2b_A 85 SVTFHHGT------ITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVE-DGGGLLMSFFS 143 (203)
T ss_dssp TSEEECCC------GGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred CCeEEeCc------ccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEcc
Confidence 88888765 56667778999999999999999 67889999999999 99999985544
No 16
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.77 E-value=8.4e-19 Score=142.05 Aligned_cols=107 Identities=11% Similarity=-0.002 Sum_probs=84.9
Q ss_pred HHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------------------CCceEEe
Q 037961 21 KELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------------------PNIRYQL 81 (262)
Q Consensus 21 ~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------------------~~~~~~~ 81 (262)
+.+.+++... .+++.+|||+|||+|..+..|++.|.+|+|+|+|+.|++.|++. .++++.+
T Consensus 9 ~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 9 KDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 3444554433 35778999999999999999999999999999999999998753 3567776
Q ss_pred CCCCchhhhhhccCCC-CceeeEEEccccccCCh---hHHHHHHHHhhcCCCeEEEE
Q 037961 82 TPTMSITELEQNVATQ-SSVDLVTIASALHWFDL---PQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~~D~V~~~~~~~~~d~---~~~l~~~~r~Lk~pgG~l~i 134 (262)
+| +.++++++ ++||+|++..++|+++. .++++++.|+|| |||++++
T Consensus 89 ~d------~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lk-pgG~~~l 138 (203)
T 1pjz_A 89 GD------FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMP-QACSGLL 138 (203)
T ss_dssp EC------CSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC-SEEEEEE
T ss_pred Cc------cccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcC-CCcEEEE
Confidence 55 55555444 78999999999999843 458999999999 9998544
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.77 E-value=3.9e-18 Score=145.64 Aligned_cols=99 Identities=22% Similarity=0.223 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.+++. .++.+..++ +.++++++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS------FLEIPCEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC------TTSCSSCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC------cccCCCCCCCEeEE
Confidence 57789999999999999999987 88999999999999988753 468888765 56677788999999
Q ss_pred EEccccccC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++..++||+ ++..+++++.++|| |||.|++...
T Consensus 155 ~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 188 (297)
T 2o57_A 155 WSQDAFLHSPDKLKVFQECARVLK-PRGVMAITDP 188 (297)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred EecchhhhcCCHHHHHHHHHHHcC-CCeEEEEEEe
Confidence 999999999 99999999999999 9999998543
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=3.2e-18 Score=139.69 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=89.5
Q ss_pred hhhHHHHHHHHhhC----CCChH------HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHh
Q 037961 3 ELFIKQANLYAVAR----PNYPK------ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 3 ~~F~~~a~~Y~~~r----p~yp~------~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (262)
+.|+..++.|+... +.|.. .+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++
T Consensus 7 ~~f~~~a~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 7 GLFDEWAHTYDSFVQGEDIQYKEVFAHYEDILEDVVN--KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp -----------------CCTTTTTTTTHHHHHHHHHH--TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHhHHHHHHHHHHHHHHhhc--cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 45788888887643 22322 34444432 36778999999999999999999999999999999999998
Q ss_pred cC-C-CceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhH--HHHHHHHhhcCCCeEEEEEec
Q 037961 73 KL-P-NIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQ--FYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 73 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~--~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+. + ++.+..++ +.+++++ ++||+|++..++|++ ++.. +++++.++|| |||.+++...
T Consensus 85 ~~~~~~~~~~~~d------~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 146 (220)
T 3hnr_A 85 EKLPKEFSITEGD------FLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLN-KGGKIVFADT 146 (220)
T ss_dssp HHSCTTCCEESCC------SSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSC-TTCEEEEEEE
T ss_pred HhCCCceEEEeCC------hhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcC-CCCEEEEEec
Confidence 64 3 67888765 5556656 899999999999999 6665 9999999999 9999998653
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=1.8e-18 Score=140.56 Aligned_cols=115 Identities=18% Similarity=0.232 Sum_probs=93.8
Q ss_pred hCCCChHHHHHHHHhhCC-CCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCC
Q 037961 15 ARPNYPKELFKLIASKTP-KRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTM 85 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~ 85 (262)
++|.|+ .+.+.+....+ +..+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++. .++.+..++
T Consensus 25 ~~~~~~-~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d-- 101 (219)
T 3dlc_A 25 FAPIYP-IIAENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD-- 101 (219)
T ss_dssp TTTHHH-HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB--
T ss_pred hccccH-HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC--
Confidence 345443 44555555432 3349999999999999999987 67999999999999998863 467888765
Q ss_pred chhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 86 SITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 86 ~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+.++++++++||+|+++.++||+ ++..+++++.++|| |||.+++...
T Consensus 102 ----~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 149 (219)
T 3dlc_A 102 ----VHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILK-SGGKTYIGGG 149 (219)
T ss_dssp ----TTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred ----HHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCC-CCCEEEEEec
Confidence 56667788999999999999999 99999999999999 9999998653
No 20
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=1.2e-18 Score=141.35 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=99.5
Q ss_pred hhHHHHHHHHhhCCCChHH-----HHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-CC
Q 037961 4 LFIKQANLYAVARPNYPKE-----LFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-PN 76 (262)
Q Consensus 4 ~F~~~a~~Y~~~rp~yp~~-----~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~ 76 (262)
.|++.|+.|+......... ..+.+....+++.+|||+|||+|..+..+ +. +++|+|+|+.|++.+++. ++
T Consensus 2 ~fd~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~ 78 (211)
T 2gs9_A 2 PFASLAEAYEAWYGTPLGAYVIAEEERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPE 78 (211)
T ss_dssp TTTTTTTTTTGGGGSHHHHHHHHHHHHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTT
T ss_pred chhhHHHHHHHHhcccchhhhHHHHHHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCC
Confidence 3666677777653332221 23345555567889999999999999888 66 999999999999999864 67
Q ss_pred ceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 77 IRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+.+..++ +.++++++++||+|++..++||+ ++.++++++.++|| |||.+++.....
T Consensus 79 ~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~ 135 (211)
T 2gs9_A 79 ATWVRAW------GEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLR-PGGALVVGVLEA 135 (211)
T ss_dssp SEEECCC------TTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEE-EEEEEEEEEECT
T ss_pred cEEEEcc------cccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcC-CCCEEEEEecCC
Confidence 8887764 55667788899999999999999 89999999999999 999999865543
No 21
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.76 E-value=3.8e-18 Score=143.60 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=98.7
Q ss_pred HHHHHHHHhh---CCCChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC----
Q 037961 6 IKQANLYAVA---RPNYPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL---- 74 (262)
Q Consensus 6 ~~~a~~Y~~~---rp~yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---- 74 (262)
+..++.|+.. +|.++.. ...++..+ +++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~ 92 (267)
T 3kkz_A 14 NLICDFFSNMERQGPGSPEV-TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS 92 (267)
T ss_dssp HHHHHHHHTSSCSSSCCHHH-HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhccccCCCCHHH-HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 3455666553 3555444 44444443 5778999999999999999998854 999999999999998753
Q ss_pred ---CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 75 ---PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++++..++ ++++++++++||+|++..++|++++..+++++.++|| |||.+++..
T Consensus 93 ~~~~~v~~~~~d------~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 150 (267)
T 3kkz_A 93 GLQNRVTGIVGS------MDDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLK-KGGYLAVSE 150 (267)
T ss_dssp TCTTTEEEEECC------TTSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred CCCcCcEEEEcC------hhhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcC-CCCEEEEEE
Confidence 458888765 5666777899999999999999999999999999999 999999844
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=5.3e-18 Score=139.77 Aligned_cols=128 Identities=20% Similarity=0.271 Sum_probs=102.1
Q ss_pred hhhhHHHHHHHHhhC----CCChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHh
Q 037961 2 AELFIKQANLYAVAR----PNYPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 2 ~~~F~~~a~~Y~~~r----p~yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 72 (262)
.+.|+..++.|+..+ |.| ..+.+.+...+ +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++
T Consensus 7 ~~~f~~~a~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 85 (234)
T 3dtn_A 7 KRKFDAVSGKYDEQRRKFIPCF-DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAK 85 (234)
T ss_dssp CCCCCHHHHHHHHHHHHHCTTH-HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHhCcCH-HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 457888888998743 334 44455555554 46789999999999999999998 779999999999999998
Q ss_pred cC----CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCC-hh--HHHHHHHHhhcCCCeEEEEEecC
Q 037961 73 KL----PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFD-LP--QFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 73 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d-~~--~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+. .++.+..++ +.+++++ ++||+|++..++|+++ +. .+++++.++|| |||.+++....
T Consensus 86 ~~~~~~~~~~~~~~d------~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 150 (234)
T 3dtn_A 86 NRFRGNLKVKYIEAD------YSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILK-ESGIFINADLV 150 (234)
T ss_dssp HHTCSCTTEEEEESC------TTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred HhhccCCCEEEEeCc------hhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcC-CCcEEEEEEec
Confidence 63 367888765 5556655 8999999999999994 44 39999999999 99999986544
No 23
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=2.2e-18 Score=144.69 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=99.9
Q ss_pred hhH-HHHHHHHhhC----CCCh---HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc-C
Q 037961 4 LFI-KQANLYAVAR----PNYP---KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK-L 74 (262)
Q Consensus 4 ~F~-~~a~~Y~~~r----p~yp---~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~ 74 (262)
.|+ ..+..|+... +.|. ..+.+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++ .
T Consensus 13 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 92 (263)
T 3pfg_A 13 DYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN 92 (263)
T ss_dssp SCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC
T ss_pred ccchhHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC
Confidence 355 6677776633 3332 34456666666778899999999999999999999999999999999999986 4
Q ss_pred CCceEEeCCCCchhhhhhccCCCCceeeEEEcc-ccccC----ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 75 PNIRYQLTPTMSITELEQNVATQSSVDLVTIAS-ALHWF----DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~-~~~~~----d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+++.+..++ +.++++ +++||+|++.. ++||+ +...+++++.++|| |||.|++-
T Consensus 93 ~~~~~~~~d------~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~i~ 150 (263)
T 3pfg_A 93 PDAVLHHGD------MRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVL-PDGVVVVE 150 (263)
T ss_dssp TTSEEEECC------TTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEE-EEEEEEEC
T ss_pred CCCEEEECC------hHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 688888875 555554 68899999998 99998 34468999999999 99999994
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.75 E-value=2e-18 Score=140.40 Aligned_cols=101 Identities=20% Similarity=0.194 Sum_probs=87.0
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
.+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+..++ +.++ +++++||+|+++.+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d------~~~~-~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQD------LFDW-TPDRQWDAVFFAHW 116 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECC------TTSC-CCSSCEEEEEEESC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEecc------cccC-CCCCceeEEEEech
Confidence 45667999999999999999999999999999999999999863 578888775 4444 57889999999999
Q ss_pred cccCCh---hHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 109 LHWFDL---PQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 109 ~~~~d~---~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+|+++. ..+++++.++|| |||.+++.....
T Consensus 117 l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 149 (218)
T 3ou2_A 117 LAHVPDDRFEAFWESVRSAVA-PGGVVEFVDVTD 149 (218)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECC
T ss_pred hhcCCHHHHHHHHHHHHHHcC-CCeEEEEEeCCC
Confidence 999943 779999999999 999999866544
No 25
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.75 E-value=1e-17 Score=140.53 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=102.0
Q ss_pred hhhHHHHHHHHhhCCCC-----hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCc
Q 037961 3 ELFIKQANLYAVARPNY-----PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNI 77 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~y-----p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 77 (262)
..|+..++.|++.-... .+.+.+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++....
T Consensus 19 ~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~ 98 (260)
T 2avn_A 19 EFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK 98 (260)
T ss_dssp HHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred chhhHHHHHHHHhccccchhHHHHHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC
Confidence 56888999998864221 1234555666667788999999999999999999999999999999999999864322
Q ss_pred eEEeCCCCchhhhhhccCCCCceeeEEEcc-ccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 78 RYQLTPTMSITELEQNVATQSSVDLVTIAS-ALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~-~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.+..+ |+.++++++++||+|++.. ..|+. ++..+++++.++|| |||.+++...+
T Consensus 99 ~~~~~------d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 99 NVVEA------KAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp CEEEC------CTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEE-EEEEEEEEEEB
T ss_pred CEEEC------cHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 35554 4666777788999999976 56676 88999999999999 99999985543
No 26
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.75 E-value=3.3e-18 Score=142.77 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=96.4
Q ss_pred HHHHhhCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceE
Q 037961 10 NLYAVARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRY 79 (262)
Q Consensus 10 ~~Y~~~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~ 79 (262)
..+...+|.++. ..+.+.... +++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.+++. .++.+
T Consensus 12 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~ 90 (256)
T 1nkv_A 12 SEHRIHNPFTEE-KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHF 90 (256)
T ss_dssp SSCSSSSSCCHH-HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred CCccccCCCCHH-HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEE
Confidence 344456777754 455555544 57789999999999999999986 77999999999999998752 36888
Q ss_pred EeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 80 QLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
..++ ++++++ +++||+|++..++|++ |+.++++++.++|| |||+|++..
T Consensus 91 ~~~d------~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~ 140 (256)
T 1nkv_A 91 IHND------AAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLK-PGGIMLIGE 140 (256)
T ss_dssp EESC------CTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEE-EEEEEEEEE
T ss_pred EECC------hHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcC-CCeEEEEec
Confidence 8765 555555 7899999999999999 89999999999999 999999843
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=8.8e-18 Score=140.27 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=97.5
Q ss_pred HHHHHHh---hCCCChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------
Q 037961 8 QANLYAV---ARPNYPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------ 74 (262)
Q Consensus 8 ~a~~Y~~---~rp~yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------ 74 (262)
..+.|.. .+|.++ .....++..+ +++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 94 (257)
T 3f4k_A 16 ICNYFKLLKRQGPGSP-EATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC 94 (257)
T ss_dssp HHHHHTTSSCSSSCCH-HHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCccccCCCCH-HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 4555554 335554 4444455443 4678999999999999999999865 999999999999998753
Q ss_pred -CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 75 -PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.++.+..++ +..+++++++||+|++..++|++++..+++++.++|| |||++++..
T Consensus 95 ~~~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-pgG~l~~~~ 150 (257)
T 3f4k_A 95 ADRVKGITGS------MDNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLK-KGGFIAVSE 150 (257)
T ss_dssp TTTEEEEECC------TTSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred CCceEEEECC------hhhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcC-CCcEEEEEE
Confidence 237888765 5667778899999999999999999999999999999 999999854
No 28
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.74 E-value=9.6e-18 Score=138.88 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=90.1
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-C-CceEEeCCCCchhhhhhccCCCCcee
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-P-NIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
.+.+... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++. . ++.+..++ ++++ .++++||
T Consensus 34 ~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d------~~~~-~~~~~fD 105 (250)
T 2p7i_A 34 VRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSR------FEDA-QLPRRYD 105 (250)
T ss_dssp HHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESC------GGGC-CCSSCEE
T ss_pred HHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEcc------HHHc-CcCCccc
Confidence 3344333 3566799999999999999999999999999999999999864 2 78888765 4444 3678999
Q ss_pred eEEEccccccC-ChhHHHHHHH-HhhcCCCeEEEEEecCCC
Q 037961 102 LVTIASALHWF-DLPQFYKQVK-WVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 102 ~V~~~~~~~~~-d~~~~l~~~~-r~Lk~pgG~l~i~~~~~~ 140 (262)
+|++..++||+ |+..+++++. ++|| |||.+++......
T Consensus 106 ~v~~~~~l~~~~~~~~~l~~~~~~~Lk-pgG~l~i~~~~~~ 145 (250)
T 2p7i_A 106 NIVLTHVLEHIDDPVALLKRINDDWLA-EGGRLFLVCPNAN 145 (250)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTTEE-EEEEEEEEEECTT
T ss_pred EEEEhhHHHhhcCHHHHHHHHHHHhcC-CCCEEEEEcCChH
Confidence 99999999999 9999999999 9999 9999999665443
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=6.7e-18 Score=139.87 Aligned_cols=115 Identities=12% Similarity=-0.006 Sum_probs=93.6
Q ss_pred hCCCChHHHHHHHHhh---CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhh
Q 037961 15 ARPNYPKELFKLIASK---TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELE 91 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~---~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 91 (262)
+|+.. +.+.+.+... .+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +.+..++ +.
T Consensus 21 ~~~~~-~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~d------~~ 91 (240)
T 3dli_A 21 FRGSR-ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--FNVVKSD------AI 91 (240)
T ss_dssp HTCCH-HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--SEEECSC------HH
T ss_pred hCCCH-HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cceeecc------HH
Confidence 34433 4555555444 35778999999999999999999999999999999999999976 7777665 44
Q ss_pred hc--cCCCCceeeEEEccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 92 QN--VATQSSVDLVTIASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 92 ~~--~~~~~~~D~V~~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+. ++++++||+|++..++||+ ++ ..+++++.++|| |||.+++.....
T Consensus 92 ~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 143 (240)
T 3dli_A 92 EYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMK-YSSYIVIESPNP 143 (240)
T ss_dssp HHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBC-TTCCEEEEEECT
T ss_pred HHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcC-CCcEEEEEeCCc
Confidence 43 6678999999999999999 44 689999999999 999999865543
No 30
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.74 E-value=8e-18 Score=140.37 Aligned_cols=105 Identities=22% Similarity=0.261 Sum_probs=91.3
Q ss_pred HHHHhhCC--CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC---CCceEEeCCCCchhhhhhccCCCC
Q 037961 25 KLIASKTP--KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL---PNIRYQLTPTMSITELEQNVATQS 98 (262)
Q Consensus 25 ~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 98 (262)
..+....+ ++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .++.+..++ +.+++++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d------~~~~~~~~~ 107 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKA------IEDIAIEPD 107 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECC------GGGCCCCTT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcc------hhhCCCCCC
Confidence 34555554 678999999999999999999887 999999999999999864 577888764 666777889
Q ss_pred ceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 99 SVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 99 ~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+||+|++..++|++ ++..+++++.++|| |||.|++..
T Consensus 108 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 145 (253)
T 3g5l_A 108 AYNVVLSSLALHYIASFDDICKKVYINLK-SSGSFIFSV 145 (253)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CeEEEEEchhhhhhhhHHHHHHHHHHHcC-CCcEEEEEe
Confidence 99999999999999 99999999999999 999999844
No 31
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.74 E-value=1e-18 Score=142.56 Aligned_cols=127 Identities=19% Similarity=0.213 Sum_probs=98.0
Q ss_pred hhhHHHHHHHHhhCC----CChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhC---CeEEEEcCCHHHHHHHhcC-
Q 037961 3 ELFIKQANLYAVARP----NYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIY---QHVIATDTSPKQLKFAIKL- 74 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp----~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~- 74 (262)
..|+..+..|..... ..+..+++.+ ..+++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++.
T Consensus 5 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 82 (219)
T 3dh0_A 5 HKFDPSKIKKLDDPSRLELFDPEKVLKEF--GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKV 82 (219)
T ss_dssp -CCCGGGGGGTSCGGGGGTCCHHHHHHHH--TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH
T ss_pred ccCCHHHHhhhcCHhhccccCHHHHHHHh--CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence 456555544433211 1133444443 23567899999999999999999876 7999999999999998753
Q ss_pred -----CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 75 -----PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 75 -----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+++.+..++ +.++++++++||+|+++.++|++ ++..+++++.++|| |||.+++..+.
T Consensus 83 ~~~~~~~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 145 (219)
T 3dh0_A 83 NKLGLKNVEVLKSE------ENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAK-PFAYLAIIDWK 145 (219)
T ss_dssp HHHTCTTEEEEECB------TTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred HHcCCCcEEEEecc------cccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhC-CCeEEEEEEec
Confidence 468888765 56666788999999999999999 89999999999999 99999985543
No 32
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=9.8e-18 Score=138.67 Aligned_cols=97 Identities=26% Similarity=0.252 Sum_probs=85.9
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC---CCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL---PNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .++.+..++ +..+++++++||+|++..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERAD------LDKLHLPQDSFDLAYSSLA 116 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC------GGGCCCCTTCEEEEEEESC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC------hhhccCCCCCceEEEEecc
Confidence 678999999999999999999888 999999999999999864 357777654 5566667889999999999
Q ss_pred cccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 109 LHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 109 ~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+|++ ++..+++++.++|+ |||.+++..
T Consensus 117 l~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 144 (243)
T 3bkw_A 117 LHYVEDVARLFRTVHQALS-PGGHFVFST 144 (243)
T ss_dssp GGGCSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred ccccchHHHHHHHHHHhcC-cCcEEEEEe
Confidence 9999 89999999999999 999999854
No 33
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=2.6e-17 Score=134.42 Aligned_cols=130 Identities=17% Similarity=0.185 Sum_probs=99.1
Q ss_pred hhhHHHHHHHHhh-C-CCChH-------HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 3 ELFIKQANLYAVA-R-PNYPK-------ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 3 ~~F~~~a~~Y~~~-r-p~yp~-------~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
+.|+..++.|+.. + ..++. .+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 92 (227)
T 3e8s_A 15 DSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILG--RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARA 92 (227)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHH--TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccccccccccccHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 5678888888652 1 22322 22333322 355889999999999999999999999999999999999998
Q ss_pred CCCceEEeCCCCchhhhhhccCC-CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 74 LPNIRYQLTPTMSITELEQNVAT-QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
..++.+...+ ..+....+.. +++||+|+++.++|+-++..+++++.++|| |||.|++....
T Consensus 93 ~~~~~~~~~~---~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 154 (227)
T 3e8s_A 93 AGAGEVHLAS---YAQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLV-PGGALVIQTLH 154 (227)
T ss_dssp TCSSCEEECC---HHHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred hcccccchhh---HHhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhC-CCeEEEEEecC
Confidence 8788888766 1222222433 455999999999994499999999999999 99999996554
No 34
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=6.9e-17 Score=136.36 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++. +++.+..++ +..+++++++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQAN------IFSLPFEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC------GGGCCSCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcc------cccCCCCCCCeeEE
Confidence 57889999999999999999987 67999999999999998753 568888764 66677788999999
Q ss_pred EEccccccC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++..++||+ |+..+++++.++|| |||.+++...
T Consensus 110 ~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 143 (276)
T 3mgg_A 110 FVCFVLEHLQSPEEALKSLKKVLK-PGGTITVIEG 143 (276)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred EEechhhhcCCHHHHHHHHHHHcC-CCcEEEEEEc
Confidence 999999999 99999999999999 9999998543
No 35
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=2e-17 Score=136.73 Aligned_cols=124 Identities=18% Similarity=0.226 Sum_probs=99.8
Q ss_pred hhHHHHHHHHhhCCCC-hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCc
Q 037961 4 LFIKQANLYAVARPNY-PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNI 77 (262)
Q Consensus 4 ~F~~~a~~Y~~~rp~y-p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~ 77 (262)
.|++.|..|+...... -..+.+.+...++++.+|||+|||+|.++..+++. .+|+|+|+|+.|++.|++. .++
T Consensus 3 ~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~ 81 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHV 81 (243)
T ss_dssp ---CTTHHHHHHTTTCCHHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCC
T ss_pred hHHHHHHHHHHhhhcccHHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCce
Confidence 5788899998854432 35678888888888899999999999999999988 8999999999999998853 467
Q ss_pred eEEeCCCCchhhhhhccCCCCceeeEEEcc-ccccC-C---hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 78 RYQLTPTMSITELEQNVATQSSVDLVTIAS-ALHWF-D---LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~-~~~~~-d---~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+..++ +.+++++ ++||+|++.. ++||+ + ...+++++.++|+ |||.+++-.
T Consensus 82 ~~~~~d------~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 137 (243)
T 3d2l_A 82 DFWVQD------MRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLT-DGGKLLFDV 137 (243)
T ss_dssp EEEECC------GGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEEEcC------hhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEc
Confidence 887765 5555544 7899999986 88887 3 4558999999999 999999843
No 36
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.73 E-value=1.3e-17 Score=139.55 Aligned_cols=107 Identities=9% Similarity=-0.059 Sum_probs=85.2
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----------------------C
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----------------------P 75 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------------------~ 75 (262)
+.+.+++.... +++.+|||+|||+|..+..|++.|.+|+|+|+|+.|++.|++. .
T Consensus 54 ~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 54 QLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 34455554332 4678999999999999999999999999999999999998642 3
Q ss_pred CceEEeCCCCchhhhhhccCCC-CceeeEEEccccccCC---hhHHHHHHHHhhcCCCeEEEE
Q 037961 76 NIRYQLTPTMSITELEQNVATQ-SSVDLVTIASALHWFD---LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-~~~D~V~~~~~~~~~d---~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++++.++| +.+++.++ ++||+|++..+++++. ...+++++.++|| |||+|++
T Consensus 134 ~i~~~~~D------~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lk-pGG~l~l 189 (252)
T 2gb4_A 134 SISLYCCS------IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLR-KEFQYLV 189 (252)
T ss_dssp SEEEEESC------TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEE-EEEEEEE
T ss_pred ceEEEECc------cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcC-CCeEEEE
Confidence 56677665 55555543 7999999999999983 3458999999999 9999975
No 37
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=3.2e-17 Score=134.19 Aligned_cols=110 Identities=22% Similarity=0.251 Sum_probs=92.4
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccC
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~ 95 (262)
+.+.+.+....+++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++. .++++..+| +.++++
T Consensus 26 ~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d------~~~~~~ 99 (227)
T 1ve3_A 26 ETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGD------ARKLSF 99 (227)
T ss_dssp HHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECC------TTSCCS
T ss_pred HHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECc------hhcCCC
Confidence 445666777777788999999999999999999988999999999999998753 678888765 445556
Q ss_pred CCCceeeEEEccc--cccC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 96 TQSSVDLVTIASA--LHWF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 96 ~~~~~D~V~~~~~--~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++++||+|+++.+ +++. ++..+++++.++|+ |||.+++...
T Consensus 100 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~ 143 (227)
T 1ve3_A 100 EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLK-PSGKFIMYFT 143 (227)
T ss_dssp CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcC-CCcEEEEEec
Confidence 7789999999999 5555 67889999999999 9999998554
No 38
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=2.1e-17 Score=136.73 Aligned_cols=125 Identities=21% Similarity=0.197 Sum_probs=99.0
Q ss_pred hhHHHHHHHHhhCC--CChHHHHHHHHhh----CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---
Q 037961 4 LFIKQANLYAVARP--NYPKELFKLIASK----TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--- 74 (262)
Q Consensus 4 ~F~~~a~~Y~~~rp--~yp~~~~~~l~~~----~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--- 74 (262)
.|+..++.|+.... ..-..+.+.+... .+++.+|||+|||+|.++..+++.+.+++|+|+|+.|++.+++.
T Consensus 2 ~y~~~a~~yd~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~ 81 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRS 81 (246)
T ss_dssp CHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccccccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhh
Confidence 58889999988654 2224444444333 24678999999999999999999999999999999999998853
Q ss_pred --CCceEEeCCCCchhhhhhccCCCCceeeEEEcc-ccccC----ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 75 --PNIRYQLTPTMSITELEQNVATQSSVDLVTIAS-ALHWF----DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~-~~~~~----d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.++.+..++ +..++++ ++||+|++.. ++||+ ++..+++++.++|| |||.+++..
T Consensus 82 ~~~~~~~~~~d------~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 142 (246)
T 1y8c_A 82 QGLKPRLACQD------ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLK-EGGVFIFDI 142 (246)
T ss_dssp TTCCCEEECCC------GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred cCCCeEEEecc------cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcC-CCcEEEEEe
Confidence 267777664 5556555 7899999998 99998 35669999999999 999999843
No 39
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.72 E-value=5.1e-17 Score=136.01 Aligned_cols=110 Identities=17% Similarity=0.229 Sum_probs=92.9
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~ 93 (262)
....+.+.... +++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.+++. +++.+..+| +.++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d------~~~~ 114 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEAND------ILTK 114 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECC------TTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECc------cccC
Confidence 34556666655 46789999999999999999987 88999999999999999865 577888765 5566
Q ss_pred cCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 94 VATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++++++||+|++..++||+ ++..+++++.++|| |||.+++...
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 160 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLK-PTGTLLITDY 160 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcC-CCCEEEEEEe
Confidence 7788999999999999998 67779999999999 9999998554
No 40
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.72 E-value=6.6e-17 Score=136.06 Aligned_cols=192 Identities=13% Similarity=0.132 Sum_probs=124.2
Q ss_pred HHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-CCceEEeCCCCchhhhhhccCCC
Q 037961 22 ELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-PNIRYQLTPTMSITELEQNVATQ 97 (262)
Q Consensus 22 ~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~ 97 (262)
.+.+.+.... +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++. +++.+..++ ++.+++++
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d------~~~~~~~~ 146 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVAS------SHRLPFSD 146 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECC------TTSCSBCT
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcc------hhhCCCCC
Confidence 3445555554 57789999999999999999987 67999999999999999864 677888765 55666778
Q ss_pred CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcccccCCCCCCccccchhHHhcCCCCC
Q 037961 98 SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKPFDTIDCNPFWAPQRKLVDKKYMSID 177 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (262)
++||+|++..+ ..+++++.++|| |||++++.......+ .++... .+. ....+. . ......+
T Consensus 147 ~~fD~v~~~~~------~~~l~~~~~~L~-pgG~l~~~~~~~~~~-~~~~~~---~~~-~~~~~~-~------~~~~~~g 207 (269)
T 1p91_A 147 TSMDAIIRIYA------PCKAEELARVVK-PGGWVITATPGPRHL-MELKGL---IYN-EVHLHA-P------HAEQLEG 207 (269)
T ss_dssp TCEEEEEEESC------CCCHHHHHHHEE-EEEEEEEEEECTTTT-HHHHTT---TCS-SCCCCC-C------CCCCCTT
T ss_pred CceeEEEEeCC------hhhHHHHHHhcC-CCcEEEEEEcCHHHH-HHHHHH---hhc-cccccc-c------hhhHhcC
Confidence 89999998655 346899999999 999999866554332 222221 111 110100 0 1111112
Q ss_pred CCCCCCCCCCCCCCCcceeEeEeecHHHHHHHHhhhhHHHHHHHhCCccchHHHHHHHHHHhccCCCCeEEEEEeEEEEE
Q 037961 178 FPFEPVDGYENTGPFDQFVVEKMMDLDDYFKFIRSCSAYQKAKDKGVELLTENVMEKFKAAWNEDGQSQKIARFRVYLRI 257 (262)
Q Consensus 178 ~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 257 (262)
|+.++. ..+.....++.+++.+++.+.+.... +.++.++.+.+. + ..++++.+.+.+
T Consensus 208 --f~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~----~--~~~~t~~~~i~~ 264 (269)
T 1p91_A 208 --FTLQQS-------AELCYPMRLRGDEAVALLQMTPFAWR--------AKPEVWQTLAAK----E--VFDCQTDFNIHL 264 (269)
T ss_dssp --EEEEEE-------EEEEEEEEEEHHHHHHHHHTSTTGGG--------CCHHHHHHHHHC----S--EEEEEEEEEEEE
T ss_pred --CcEEEE-------EEEEEEEEcCHHHHHHHhccCCceEC--------CCHHHHHHHhcC----C--CceEEEEEEEEE
Confidence 332221 13445555677788888777554322 223234445432 2 457888888888
Q ss_pred EEeC
Q 037961 258 GKVG 261 (262)
Q Consensus 258 ~rk~ 261 (262)
++|.
T Consensus 265 ~~k~ 268 (269)
T 1p91_A 265 WQRS 268 (269)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8874
No 41
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.72 E-value=7.4e-17 Score=132.48 Aligned_cols=111 Identities=21% Similarity=0.279 Sum_probs=93.6
Q ss_pred HHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---C--------CceEEeCCCCchhhhh
Q 037961 23 LFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL---P--------NIRYQLTPTMSITELE 91 (262)
Q Consensus 23 ~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~~ 91 (262)
+...+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. . ++.+..++ +.
T Consensus 20 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d------~~ 93 (235)
T 3sm3_A 20 LYPIIHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVEN------AS 93 (235)
T ss_dssp CCTTHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECC------TT
T ss_pred HHHHHHHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEec------cc
Confidence 3455666778889999999999999999999999999999999999999862 1 34666654 55
Q ss_pred hccCCCCceeeEEEccccccC-Chh---HHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 92 QNVATQSSVDLVTIASALHWF-DLP---QFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~-d~~---~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
.+++++++||+|++..++|++ ++. .+++++.++|| |||.+++..+...
T Consensus 94 ~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 94 SLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLK-PGAYLYLVEFGQN 145 (235)
T ss_dssp SCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEEEEBCC
T ss_pred ccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcC-CCeEEEEEECCcc
Confidence 666778999999999999999 888 89999999999 9999999665543
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.72 E-value=5e-17 Score=139.96 Aligned_cols=106 Identities=14% Similarity=0.142 Sum_probs=91.0
Q ss_pred HHHHhhC---CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc
Q 037961 25 KLIASKT---PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 25 ~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~ 93 (262)
+.+...+ +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++ .++++..++ +.++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~ 179 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN------MLDT 179 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC------TTSC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC------hhcC
Confidence 3455544 46789999999999999999998 89999999999999998853 368888765 5666
Q ss_pred cCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 94 VATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++++++||+|++..++||+++..+++++.++|| |||+|++...
T Consensus 180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 222 (312)
T 3vc1_A 180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLK-VGGRYVTITG 222 (312)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcC-CCcEEEEEEc
Confidence 778899999999999999999999999999999 9999998543
No 43
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=5e-17 Score=132.82 Aligned_cols=124 Identities=18% Similarity=0.195 Sum_probs=100.6
Q ss_pred ChhhhHHHHHHHHhhC----CCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCC
Q 037961 1 MAELFIKQANLYAVAR----PNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPN 76 (262)
Q Consensus 1 ~~~~F~~~a~~Y~~~r----p~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~ 76 (262)
|...|+..++.|++.- +.|. ..++.+....+ +.+|||+|||+|.++..++.. +|+|+|+.|++.+++. +
T Consensus 13 ~~~~~~~~~~~y~~~~~~~~~~~~-~~~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-~ 85 (219)
T 1vlm_A 13 MWHIFERFVNEYERWFLVHRFAYL-SELQAVKCLLP-EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-G 85 (219)
T ss_dssp TTHHHHHTHHHHHHHHHHTHHHHH-HHHHHHHHHCC-SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-T
T ss_pred heeecchhHHHHHHHHHhcchhHH-HHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-C
Confidence 5677888888887642 2232 23445555555 788999999999999998776 9999999999999877 7
Q ss_pred ceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 77 IRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+..++ +.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++....
T Consensus 86 ~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~ 141 (219)
T 1vlm_A 86 VFVLKGT------AENLPLKDESFDFALMVTTICFVDDPERALKEAYRILK-KGGYLIVGIVD 141 (219)
T ss_dssp CEEEECB------TTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred CEEEEcc------cccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcC-CCcEEEEEEeC
Confidence 8887764 55566778899999999999999 89999999999999 99999985544
No 44
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.72 E-value=2.5e-17 Score=134.28 Aligned_cols=112 Identities=14% Similarity=0.144 Sum_probs=88.8
Q ss_pred CChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-----------CCceEEeC
Q 037961 18 NYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-----------PNIRYQLT 82 (262)
Q Consensus 18 ~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~ 82 (262)
.+.++..+.+...+ .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++.+..+
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 34455566665554 366799999999999999999875 6999999999999999853 16888877
Q ss_pred CCCchhhhhhccCCCCceeeEEEccccccCC-h--hHHHHHHHHhhcCCCeEEEEEe
Q 037961 83 PTMSITELEQNVATQSSVDLVTIASALHWFD-L--PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d-~--~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+ +...+.++++||+|++..++||++ + ..+++++.++|| |||.+++..
T Consensus 92 d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~ 141 (217)
T 3jwh_A 92 A------LTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQ-PKIVIVTTP 141 (217)
T ss_dssp C------TTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEE
T ss_pred C------cccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 5 444444567999999999999994 4 579999999999 999777633
No 45
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.71 E-value=3.4e-17 Score=133.23 Aligned_cols=98 Identities=19% Similarity=0.271 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+..++ +.+++ ++++||+|+++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d------~~~~~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATD------ILQFS-TAELFDLIVVAE 122 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECC------TTTCC-CSCCEEEEEEES
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcc------hhhCC-CCCCccEEEEcc
Confidence 3567899999999999999999999999999999999999863 467888765 45554 578999999999
Q ss_pred ccccC-Ch---hHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWF-DL---PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~-d~---~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++||+ ++ .++++++.++|| |||.|++...
T Consensus 123 ~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 155 (216)
T 3ofk_A 123 VLYYLEDMTQMRTAIDNMVKMLA-PGGHLVFGSA 155 (216)
T ss_dssp CGGGSSSHHHHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred HHHhCCCHHHHHHHHHHHHHHcC-CCCEEEEEec
Confidence 99999 66 457999999999 9999998543
No 46
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=2.6e-17 Score=140.84 Aligned_cols=128 Identities=15% Similarity=0.121 Sum_probs=90.0
Q ss_pred hhHHHH-HHHHhhCCCC-hHHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------
Q 037961 4 LFIKQA-NLYAVARPNY-PKELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------ 74 (262)
Q Consensus 4 ~F~~~a-~~Y~~~rp~y-p~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------ 74 (262)
.|+..+ ..|+...+.. +......+...+ ++..+|||||||+|.++..+++.+.+|+|+|+|+.|++.|++.
T Consensus 50 ~y~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~ 129 (299)
T 3g2m_A 50 FYDEGAADTYRDLIQDADGTSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPA 129 (299)
T ss_dssp CC--------------CCCHHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCH
T ss_pred HHhHHHHHHHHHHhcccCccHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccc
Confidence 455544 6677665521 244444444443 4456899999999999999999999999999999999999853
Q ss_pred ---CCceEEeCCCCchhhhhhccCCCCceeeEEE-ccccccCCh---hHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 75 ---PNIRYQLTPTMSITELEQNVATQSSVDLVTI-ASALHWFDL---PQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~-~~~~~~~d~---~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.++.++++| +.++++ +++||+|++ ...+|++++ ..+++++.++|| |||+|++.....
T Consensus 130 ~~~~~v~~~~~d------~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 193 (299)
T 3g2m_A 130 DVRDRCTLVQGD------MSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLE-PGGKFLLSLAMS 193 (299)
T ss_dssp HHHTTEEEEECB------TTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEE-EEEEEEEEEECC
T ss_pred ccccceEEEeCc------hhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcC-CCcEEEEEeecC
Confidence 468888865 555555 688999985 577888864 679999999999 999999855543
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.71 E-value=7.3e-17 Score=142.88 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC--------------CCceEEeCCCCchhhhhhcc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL--------------PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--------------~~~~~~~~~~~~~~~~~~~~ 94 (262)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++ +++.++.++.....+....+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 36789999999999999999885 45999999999999999864 58888887621111111127
Q ss_pred CCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 95 ATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++++||+|+++.++||+ |+..+++++.++|| |||.|++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLR-DGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcC-CCCEEEEEE
Confidence 788999999999999999 99999999999999 999999854
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.71 E-value=7.8e-17 Score=137.20 Aligned_cols=111 Identities=17% Similarity=0.134 Sum_probs=90.5
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSIT 88 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~ 88 (262)
+.+.+++...+ .++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|++. .++.+..++
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d----- 117 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN----- 117 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC-----
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC-----
Confidence 55555555544 3667899999999999999999999999999999999998742 356666654
Q ss_pred hhhhcc---CCCCceeeEEEc-cccccC-C-------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 89 ELEQNV---ATQSSVDLVTIA-SALHWF-D-------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 89 ~~~~~~---~~~~~~D~V~~~-~~~~~~-d-------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+..++ +++++||+|++. .++||+ + +.++++++.++|| |||.|++....
T Consensus 118 -~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 177 (293)
T 3thr_A 118 -WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR-PGGLLVIDHRN 177 (293)
T ss_dssp -GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred -hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 44444 678899999998 899998 8 8889999999999 99999985433
No 49
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.70 E-value=6.4e-17 Score=131.08 Aligned_cols=114 Identities=18% Similarity=0.163 Sum_probs=95.3
Q ss_pred hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhcc
Q 037961 20 PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 20 p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+..+.+.+....+++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++. +++.+..++ +.+++
T Consensus 29 ~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d------~~~~~ 102 (215)
T 2pxx_A 29 FSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMD------VRKLD 102 (215)
T ss_dssp HHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECC------TTSCC
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcc------hhcCC
Confidence 3567777888888889999999999999999999876 899999999999999863 567888765 45556
Q ss_pred CCCCceeeEEEccccccC----------------ChhHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 95 ATQSSVDLVTIASALHWF----------------DLPQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~----------------d~~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
+++++||+|+++.+++++ +...+++++.++|| |||.+++..+..+
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~~ 163 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV-PGGRFISMTSAAP 163 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCH
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc-CCCEEEEEeCCCc
Confidence 678899999998888644 34779999999999 9999999777654
No 50
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.70 E-value=4.1e-17 Score=138.94 Aligned_cols=129 Identities=11% Similarity=0.081 Sum_probs=87.3
Q ss_pred hhhHHHHHHHHhhCCCCh----HHHHHH----H-HhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHh
Q 037961 3 ELFIKQANLYAVARPNYP----KELFKL----I-ASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAI 72 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp----~~~~~~----l-~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~ 72 (262)
+.|+..+..|...|...+ ..+..+ + ....+++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+
T Consensus 25 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~ 104 (298)
T 1ri5_A 25 EHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDAR 104 (298)
T ss_dssp ----------------CCSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred HHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 456666666655554321 122222 2 23446888999999999999999988765 9999999999999988
Q ss_pred cC-------CCceEEeCCCCchhhhhhccC-CCCceeeEEEcccccc----C-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 73 KL-------PNIRYQLTPTMSITELEQNVA-TQSSVDLVTIASALHW----F-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 73 ~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~D~V~~~~~~~~----~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+. .++.+..++ +.+.++ ++++||+|++..++|+ . ++..+++++.++|| |||.|++....
T Consensus 105 ~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 176 (298)
T 1ri5_A 105 VRARNMKRRFKVFFRAQD------SYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLR-PGGYFIMTVPS 176 (298)
T ss_dssp HHHHTSCCSSEEEEEESC------TTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred HHHHhcCCCccEEEEECC------ccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 53 246777765 455555 5789999999999998 3 56779999999999 99999986544
No 51
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=1.2e-16 Score=135.87 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=93.0
Q ss_pred ChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCch
Q 037961 19 YPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSI 87 (262)
Q Consensus 19 yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 87 (262)
|.+.+++.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++. .++++..+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d---- 80 (284)
T 3gu3_A 5 YNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD---- 80 (284)
T ss_dssp CCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESC----
T ss_pred cchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcc----
Confidence 4456666666554 47789999999999999999986 57999999999999988753 367788765
Q ss_pred hhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 88 TELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 88 ~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.++++ +++||+|++..++|++ |+..+++++.++|| |||.+++....
T Consensus 81 --~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 81 --ATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp --TTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred --hhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcC-CCCEEEEEecc
Confidence 555665 4689999999999999 99999999999999 99999985543
No 52
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.69 E-value=7.1e-17 Score=126.48 Aligned_cols=105 Identities=21% Similarity=0.260 Sum_probs=89.1
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc-CCCceEEeCCCCchhhhhhccCCCCce
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK-LPNIRYQLTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (262)
.+++.+. .+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++ .+++++..++ .++++++|
T Consensus 8 ~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---------~~~~~~~~ 76 (170)
T 3i9f_A 8 EYLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP---------KEIPDNSV 76 (170)
T ss_dssp TTHHHHH--SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG---------GGSCTTCE
T ss_pred HHHHhcC--cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC---------CCCCCCce
Confidence 3444442 3567789999999999999999987799999999999999986 4778887652 55678899
Q ss_pred eeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 101 DLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|+|+++.++|++ ++..+++++.++|| |||.+++..+.
T Consensus 77 D~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 114 (170)
T 3i9f_A 77 DFILFANSFHDMDDKQHVISEVKRILK-DDGRVIIIDWR 114 (170)
T ss_dssp EEEEEESCSTTCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEEEccchhcccCHHHHHHHHHHhcC-CCCEEEEEEcC
Confidence 999999999999 99999999999999 99999985543
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=2.2e-16 Score=135.26 Aligned_cols=105 Identities=20% Similarity=0.172 Sum_probs=87.3
Q ss_pred HHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc
Q 037961 24 FKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 24 ~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~ 93 (262)
++.+.... +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++. .++.+..+| +.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~ 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG------WEEF 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC------GGGC
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------HHHc
Confidence 44455554 47789999999999999999987 89999999999999999853 267788765 4443
Q ss_pred cCCCCceeeEEEccccccC-Ch---------hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 94 VATQSSVDLVTIASALHWF-DL---------PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~-d~---------~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+++||+|++..++|++ |+ ..+++++.++|| |||++++....
T Consensus 135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 185 (302)
T 3hem_A 135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP-DDGRMLLHTIT 185 (302)
T ss_dssp ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC-TTCEEEEEEEE
T ss_pred ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC-CCcEEEEEEEe
Confidence 6889999999999999 66 589999999999 99999985544
No 54
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=1.6e-16 Score=132.32 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=96.9
Q ss_pred hhHHHHHHHHhhCCCChHH-------------HHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHH
Q 037961 4 LFIKQANLYAVARPNYPKE-------------LFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQ 67 (262)
Q Consensus 4 ~F~~~a~~Y~~~rp~yp~~-------------~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~ 67 (262)
.|+..++.|+...+.|... ....++..+ .++.+|||+|||+|.++..++.. ..+|+++|+|+.|
T Consensus 49 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~ 128 (254)
T 1xtp_A 49 WYGKALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHM 128 (254)
T ss_dssp HHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHH
T ss_pred hhhhhhhHHhcCCccccceecCcCccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHH
Confidence 3556777777744433211 123333333 36789999999999999999887 4579999999999
Q ss_pred HHHHhcC----CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCC---hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 68 LKFAIKL----PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFD---LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 68 ~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d---~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++.+++. .++.+..++ +..+++++++||+|++..++|++. +..+++++.++|| |||.|++..
T Consensus 129 ~~~a~~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~ 197 (254)
T 1xtp_A 129 LEEAKRELAGMPVGKFILAS------METATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALT-PNGYIFFKE 197 (254)
T ss_dssp HHHHHHHTTTSSEEEEEESC------GGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHhccCCceEEEEcc------HHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEe
Confidence 9999864 457777654 666677788999999999999993 5679999999999 999999854
No 55
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.69 E-value=8.8e-17 Score=132.57 Aligned_cols=125 Identities=17% Similarity=0.262 Sum_probs=97.0
Q ss_pred hhH-HHHHHHHhhC----CCChH---HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-
Q 037961 4 LFI-KQANLYAVAR----PNYPK---ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL- 74 (262)
Q Consensus 4 ~F~-~~a~~Y~~~r----p~yp~---~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~- 74 (262)
.|+ ..++.|+..- +.|.. .+.+.+....+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++.
T Consensus 3 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 3 MYEVDHADVYDLFYLGRGKDYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp -CCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC
T ss_pred cccchhHHHHHHHhhccHhhHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC
Confidence 355 5667776642 44432 34555666667788999999999999999999888999999999999999864
Q ss_pred CCceEEeCCCCchhhhhhccCCCCceeeEEEc-cccccC-Ch---hHHHHHHHHhhcCCCeEEEEEe
Q 037961 75 PNIRYQLTPTMSITELEQNVATQSSVDLVTIA-SALHWF-DL---PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~-~~~~~~-d~---~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++.+..++ +.++++ +++||+|+|. .++||+ ++ ..+++++.++|| |||.+++..
T Consensus 83 ~~~~~~~~d------~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 141 (239)
T 3bxo_A 83 PDATLHQGD------MRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLE-PGGVVVVEP 141 (239)
T ss_dssp TTCEEEECC------TTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEE-EEEEEEECC
T ss_pred CCCEEEECC------HHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEe
Confidence 678888765 444554 6789999964 488988 43 569999999999 999999843
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=1.2e-16 Score=132.38 Aligned_cols=98 Identities=21% Similarity=0.243 Sum_probs=82.3
Q ss_pred CCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeEEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~ 105 (262)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++. .++.+..++ +..+++++++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d------~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG------LQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC------GGGCCCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcC------hhhcCCCCCCEEEEEE
Confidence 5789999999999999999887 45999999999999999863 135666654 6666667789999999
Q ss_pred ccccccC-Chh--HHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHWF-DLP--QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..++|++ ++. .+++++.++|| |||.|++...
T Consensus 153 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 186 (241)
T 2ex4_A 153 QWVIGHLTDQHLAEFLRRCKGSLR-PNGIIVIKDN 186 (241)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEEc
Confidence 9999999 543 79999999999 9999998543
No 57
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=5.6e-17 Score=139.65 Aligned_cols=110 Identities=14% Similarity=0.161 Sum_probs=85.0
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------------CCceEEeCCCCch
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------------PNIRYQLTPTMSI 87 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------------~~~~~~~~~~~~~ 87 (262)
.+.+.+....+++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.+++. .++.+.++|
T Consensus 23 ~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D---- 98 (313)
T 3bgv_A 23 EFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD---- 98 (313)
T ss_dssp HHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC----
T ss_pred HHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec----
Confidence 334444444457789999999999999999875 67999999999999998753 256777766
Q ss_pred hhhhhcc----C--CCCceeeEEEccccccC--Ch---hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 88 TELEQNV----A--TQSSVDLVTIASALHWF--DL---PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 88 ~~~~~~~----~--~~~~~D~V~~~~~~~~~--d~---~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++..+ + ++++||+|+++.++||+ +. ..+++++.++|| |||.|++....
T Consensus 99 --~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~ 157 (313)
T 3bgv_A 99 --SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLS-PGGYFIGTTPN 157 (313)
T ss_dssp --TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEE-EEEEEEEEEEC
T ss_pred --ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhC-CCcEEEEecCC
Confidence 33332 3 34589999999999998 43 579999999999 99999986544
No 58
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.68 E-value=3.1e-17 Score=140.09 Aligned_cols=101 Identities=17% Similarity=0.247 Sum_probs=82.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------------------------------------
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------------------------------------ 74 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------------------------------------ 74 (262)
++.+|||||||+|.++..++.. +.+|+|+|+|+.|++.|++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999997 57999999999999999864
Q ss_pred ----------------------------CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-------ChhHHHH
Q 037961 75 ----------------------------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-------DLPQFYK 119 (262)
Q Consensus 75 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-------d~~~~l~ 119 (262)
.++.+..++.... ..+..++.+++||+|+|..+++|+ +..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~-~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLD-RDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCS-SHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccC-ccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 2577777661110 011123467899999999999888 6778999
Q ss_pred HHHHhhcCCCeEEEEE
Q 037961 120 QVKWVLKKPSGVIAAW 135 (262)
Q Consensus 120 ~~~r~Lk~pgG~l~i~ 135 (262)
+++++|+ |||.|++-
T Consensus 205 ~~~~~Lk-pGG~lil~ 219 (292)
T 3g07_A 205 RIYRHLR-PGGILVLE 219 (292)
T ss_dssp HHHHHEE-EEEEEEEE
T ss_pred HHHHHhC-CCcEEEEe
Confidence 9999999 99999983
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.68 E-value=2.1e-16 Score=125.50 Aligned_cols=106 Identities=17% Similarity=0.107 Sum_probs=81.2
Q ss_pred HHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc-CCCC
Q 037961 26 LIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV-ATQS 98 (262)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~-~~~~ 98 (262)
.+....+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|+++ .++++..++ ++.++ +.++
T Consensus 15 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~------~~~l~~~~~~ 88 (185)
T 3mti_A 15 FLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDG------HENLDHYVRE 88 (185)
T ss_dssp HHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESC------GGGGGGTCCS
T ss_pred HHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCc------HHHHHhhccC
Confidence 3445567889999999999999999999999999999999999998753 578888754 33321 3467
Q ss_pred ceeeEEEcc-cccc-------C--ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 99 SVDLVTIAS-ALHW-------F--DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 99 ~~D~V~~~~-~~~~-------~--d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+||+|+++. .+++ . +...+++++.++|| |||.+++..+.
T Consensus 89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 137 (185)
T 3mti_A 89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLE-VGGRLAIMIYY 137 (185)
T ss_dssp CEEEEEEEEC-----------CHHHHHHHHHHHHHHEE-EEEEEEEEEC-
T ss_pred CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcC-CCcEEEEEEeC
Confidence 899999873 3332 1 34468899999999 99999986654
No 60
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.68 E-value=1.4e-16 Score=129.97 Aligned_cols=107 Identities=18% Similarity=0.139 Sum_probs=85.6
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-----------CCceEEeCCCCc
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-----------PNIRYQLTPTMS 86 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~ 86 (262)
...+.+...+ .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++++..++
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d--- 92 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS--- 92 (219)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC---
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc---
Confidence 3344444433 466799999999999999999876 6999999999999999863 178888775
Q ss_pred hhhhhhccCCCCceeeEEEccccccCC-h--hHHHHHHHHhhcCCCeEEEEE
Q 037961 87 ITELEQNVATQSSVDLVTIASALHWFD-L--PQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 87 ~~~~~~~~~~~~~~D~V~~~~~~~~~d-~--~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+...+.++++||+|++..++|+++ + .++++++.++|| |||.++..
T Consensus 93 ---~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~~i~~ 140 (219)
T 3jwg_A 93 ---LVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTR-PQTVIVST 140 (219)
T ss_dssp ---SSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEE
T ss_pred ---ccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhC-CCEEEEEc
Confidence 444455678999999999999994 4 479999999999 99966653
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.68 E-value=1.5e-16 Score=130.12 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=90.8
Q ss_pred HHHHhhCCCChHHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchh
Q 037961 10 NLYAVARPNYPKELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSIT 88 (262)
Q Consensus 10 ~~Y~~~rp~yp~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 88 (262)
..|.+....|-..+...+.... .++.+|||+|||+|..+..+++.+.+++|+|+|+.+++.+++.. .++..++
T Consensus 8 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~d----- 81 (230)
T 3cc8_A 8 SLYEEKSGHYYNAVNPNLLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-DHVVLGD----- 81 (230)
T ss_dssp ------------CCCHHHHTTCCTTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-SEEEESC-----
T ss_pred hhhhccchhHHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-CcEEEcc-----
Confidence 3454444444444445555555 47789999999999999999988899999999999999998753 3566654
Q ss_pred hhhh--ccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 89 ELEQ--NVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 89 ~~~~--~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+.+ .++++++||+|++..++|++ ++..+++++.++|+ |||.+++.....
T Consensus 82 -~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 133 (230)
T 3cc8_A 82 -IETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIK-QNGVILASIPNV 133 (230)
T ss_dssp -TTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEE-EEEEEEEEEECT
T ss_pred -hhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcC-CCCEEEEEeCCc
Confidence 333 45677899999999999999 99999999999999 999999865443
No 62
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.68 E-value=2.1e-16 Score=130.39 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=88.2
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~ 93 (262)
+.+.+.+.....+..+|||+|||+|..+..+++.+.+|+|+|+|+.+++.+++. .++++..+| +.++
T Consensus 54 ~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~ 127 (235)
T 3lcc_A 54 PLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKED------VFTW 127 (235)
T ss_dssp HHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCC------TTTC
T ss_pred HHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECc------hhcC
Confidence 444555544443456999999999999999999999999999999999999863 247777765 4444
Q ss_pred cCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 94 VATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+ ++++||+|++..++|++ +...+++++.++|| |||.|++..+.
T Consensus 128 ~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 173 (235)
T 3lcc_A 128 R-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLK-PDGELITLMYP 173 (235)
T ss_dssp C-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred C-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCC-CCcEEEEEEec
Confidence 4 45689999999999999 45669999999999 99999986654
No 63
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=9.5e-17 Score=134.45 Aligned_cols=125 Identities=12% Similarity=-0.063 Sum_probs=87.6
Q ss_pred hhhHHHHHHHHhhCCCCh-HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceE
Q 037961 3 ELFIKQANLYAVARPNYP-KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRY 79 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp-~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 79 (262)
..|+..+..|.+....-. +...+.+.... +++.+|||+|||+|.++..+++++.+|+|+|+|+.|++.|+++.....
T Consensus 12 ~~wd~~a~~f~~~~~~~~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~ 91 (261)
T 3iv6_A 12 EAWELIGNQFWTIGRVAARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC 91 (261)
T ss_dssp HHHHTTTTHHHHTSCGGGSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC
T ss_pred hHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc
Confidence 456665656644322110 23344455444 477899999999999999999999999999999999999986422112
Q ss_pred EeCCCCchhhhhhccC-----CCCceeeEEEccccccCC---hhHHHHHHHHhhcCCCeEEEEE
Q 037961 80 QLTPTMSITELEQNVA-----TQSSVDLVTIASALHWFD---LPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~-----~~~~~D~V~~~~~~~~~d---~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+..+ +.+... .+++||+|+++.++||+. ...+++++.++| |||++++.
T Consensus 92 v~~~------~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL--PGG~l~lS 147 (261)
T 3iv6_A 92 VTID------LLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV--GSGTVRAS 147 (261)
T ss_dssp CEEE------ECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH--TTSEEEEE
T ss_pred ceee------eeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC--cCcEEEEE
Confidence 2222 111111 256899999999999873 445899999998 69999983
No 64
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=8.5e-17 Score=133.23 Aligned_cols=109 Identities=12% Similarity=0.089 Sum_probs=85.2
Q ss_pred HHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhh-
Q 037961 21 KELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQ- 92 (262)
Q Consensus 21 ~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~- 92 (262)
..+++.+.... +++.+|||||||+|..+..+++. ..++++||+|+.|++.|++. .++.++.++ ++.
T Consensus 47 ~~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~------a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL------WEDV 120 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC------HHHH
T ss_pred HHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh------HHhh
Confidence 44555555544 57889999999999999999886 46899999999999999852 456666665 333
Q ss_pred -ccCCCCceeeEEE-----ccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 93 -NVATQSSVDLVTI-----ASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 93 -~~~~~~~~D~V~~-----~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.++++++||.|+. ....++. +++.+++++.|+|| |||+|++++
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~l~f~~ 170 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCN 170 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECC
T ss_pred cccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeC-CCCEEEEEe
Confidence 2467889999974 4455555 89999999999999 999998754
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.67 E-value=2.6e-16 Score=127.16 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=86.9
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhH-HHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccC
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAA-ASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~-~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~ 95 (262)
.+++.+. ..+++.+|||+|||+|..+ ..++..+.+|+|+|+|+.|++.+++. .++.+..++ +.++++
T Consensus 13 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d------~~~~~~ 85 (209)
T 2p8j_A 13 RFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGD------IRKLPF 85 (209)
T ss_dssp HHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECC------TTSCCS
T ss_pred HHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECc------hhhCCC
Confidence 3344433 4567789999999999984 45566788999999999999998753 567787765 556667
Q ss_pred CCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 96 TQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 96 ~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++++||+|++..++|++ ++..+++++.++|| |||.+++..+.
T Consensus 86 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 130 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLK-PGGLACINFLT 130 (209)
T ss_dssp CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcC-CCcEEEEEEec
Confidence 78899999999999988 56679999999999 99999985443
No 66
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.67 E-value=1.5e-16 Score=128.16 Aligned_cols=111 Identities=23% Similarity=0.197 Sum_probs=88.6
Q ss_pred hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhcc
Q 037961 20 PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 20 p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+...+..++...+++ +|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++. .++.+..++ +...+
T Consensus 17 ~~~~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d------~~~~~ 89 (202)
T 2kw5_A 17 PNDFLVSVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSN------LADFD 89 (202)
T ss_dssp CCSSHHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCB------TTTBS
T ss_pred chHHHHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcC------hhhcC
Confidence 344455555666666 999999999999999999999999999999999998863 367777654 55566
Q ss_pred CCCCceeeEEEccccccC--ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 95 ATQSSVDLVTIASALHWF--DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~--d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+++++||+|+++. .|+- +...+++++.++|| |||.+++..+..
T Consensus 90 ~~~~~fD~v~~~~-~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 IVADAWEGIVSIF-CHLPSSLRQQLYPKVYQGLK-PGGVFILEGFAP 134 (202)
T ss_dssp CCTTTCSEEEEEC-CCCCHHHHHHHHHHHHTTCC-SSEEEEEEEECT
T ss_pred CCcCCccEEEEEh-hcCCHHHHHHHHHHHHHhcC-CCcEEEEEEecc
Confidence 6788999999964 3442 57779999999999 999999966543
No 67
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.67 E-value=2.3e-16 Score=141.06 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=92.3
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCc
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSS 99 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (262)
.+.+.+.... +++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++. ++..... .+..++++.+++++++
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-~~~~~~~-~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-GIRVRTD-FFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-TCCEECS-CCSHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-CCCccee-eechhhHhhcccCCCC
Confidence 3445555554 3678999999999999999999999999999999999999976 3443332 2223566777777899
Q ss_pred eeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 100 VDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 100 ~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
||+|++..++||+ |+..+++++.++|| |||+|++..
T Consensus 172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lk-pgG~l~i~~ 208 (416)
T 4e2x_A 172 ANVIYAANTLCHIPYVQSVLEGVDALLA-PDGVFVFED 208 (416)
T ss_dssp EEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEEEEECChHHhcCCHHHHHHHHHHHcC-CCeEEEEEe
Confidence 9999999999999 99999999999999 999999844
No 68
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.66 E-value=6.9e-16 Score=123.52 Aligned_cols=96 Identities=18% Similarity=0.229 Sum_probs=82.7
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.+++. +++.+..++ +.++++ +++||+|++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d------~~~~~~-~~~~D~v~~~ 104 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVD------LNNLTF-DRQYDFILST 104 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECC------GGGCCC-CCCEEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcc------hhhCCC-CCCceEEEEc
Confidence 567999999999999999999999999999999999998752 367888765 555665 7889999999
Q ss_pred cccccC---ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 107 SALHWF---DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 107 ~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.++||+ +...+++++.++|| |||.+++..
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~ 136 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTK-PGGYNLIVA 136 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEE
Confidence 999998 45679999999999 999988744
No 69
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.66 E-value=3e-16 Score=128.88 Aligned_cols=101 Identities=18% Similarity=0.101 Sum_probs=86.0
Q ss_pred HHHHHHHHh-hCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc-CCCceEEeCCCCchhhh-hhccCC-
Q 037961 21 KELFKLIAS-KTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK-LPNIRYQLTPTMSITEL-EQNVAT- 96 (262)
Q Consensus 21 ~~~~~~l~~-~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~-~~~~~~- 96 (262)
..+++.+.. ..+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++ .+++++..++ + +.++++
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d------~~~~~~~~~ 108 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWN------GKGELPAGL 108 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECC------SCSSCCTTC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcc------hhhccCCcC
Confidence 445555444 45788999999999999999999999999999999999999986 4788998876 3 446666
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEE
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~ 133 (262)
+++||+|+++ .++..+++++.++|| |||.|+
T Consensus 109 ~~~fD~v~~~-----~~~~~~l~~~~~~Lk-pgG~l~ 139 (226)
T 3m33_A 109 GAPFGLIVSR-----RGPTSVILRLPELAA-PDAHFL 139 (226)
T ss_dssp CCCEEEEEEE-----SCCSGGGGGHHHHEE-EEEEEE
T ss_pred CCCEEEEEeC-----CCHHHHHHHHHHHcC-CCcEEE
Confidence 8899999987 578899999999999 999998
No 70
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=4.8e-16 Score=128.92 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=88.0
Q ss_pred HHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---CCceEEeCCCCchhhhhhccCCCCc
Q 037961 23 LFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL---PNIRYQLTPTMSITELEQNVATQSS 99 (262)
Q Consensus 23 ~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (262)
.+..+....+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.++++ .++.+.+++........... ...+
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~ 124 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIH-SEIG 124 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHH-HHHC
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccc-cccC
Confidence 3444555556778999999999999999999988999999999999999863 47888887721111111110 1134
Q ss_pred eeeEEEccccccCC---hhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 100 VDLVTIASALHWFD---LPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 100 ~D~V~~~~~~~~~d---~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
||+|++..++|+++ ...+++++.++|| |||++++.....
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 166 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLG-KQGAMYLIELGT 166 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHT-TTCEEEEEEECT
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEeCCc
Confidence 99999999999995 4579999999999 999988866553
No 71
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=4e-15 Score=118.40 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=93.5
Q ss_pred HHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-CCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 26 LIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-PNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
.+....+++.+|||+|||+|..+..+++.+.+++++|+|+.+++.+++. +++.+..++ +...++++++||+|+
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d------~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGD------LSVDQISETDFDLIV 112 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECC------TTTSCCCCCCEEEEE
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcc------cccCCCCCCceeEEE
Confidence 4444467888999999999999999999999999999999999999864 678888765 445556778999999
Q ss_pred Ec-cccccCC---hhHHHHHHHHhhcCCCeEEEEEecCCCcc-cHHHHHhhcc
Q 037961 105 IA-SALHWFD---LPQFYKQVKWVLKKPSGVIAAWTYTMPEI-NESVGAVFKP 152 (262)
Q Consensus 105 ~~-~~~~~~d---~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~-~~~~~~~~~~ 152 (262)
++ ..+|+++ ...+++++.++|+ |||.+++.......+ ...+.+++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~-~~G~l~~~~~~~~~~~~~~~~~~l~~ 164 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALG-ADGRAVIGFGAGRGWVFGDFLEVAER 164 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEETTSSCCHHHHHHHHHH
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhC-CCCEEEEEeCCCCCcCHHHHHHHHHH
Confidence 98 7888873 3669999999999 999999854433222 2444444443
No 72
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.65 E-value=1.3e-15 Score=129.36 Aligned_cols=105 Identities=22% Similarity=0.216 Sum_probs=86.3
Q ss_pred HHHHHHhhC--CCCCeEEEEcCcccHhHHHHH-hhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh
Q 037961 23 LFKLIASKT--PKRNLAWDVGTRSGQAAASLA-QIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 23 ~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 92 (262)
.++.+.... +++.+|||+|||+|.++..++ ..+.+|+|+|+|+.+++.+++. .++.+..++ +.+
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~~~ 125 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG------WEQ 125 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC------GGG
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC------hhh
Confidence 345555554 467899999999999999998 4588999999999999998753 467777765 444
Q ss_pred ccCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 93 NVATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++ ++||+|++..++|++ ++..+++++.++|| |||.+++...
T Consensus 126 ~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 169 (287)
T 1kpg_A 126 FD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP-ADGVMLLHTI 169 (287)
T ss_dssp CC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC-TTCEEEEEEE
T ss_pred CC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcC-CCCEEEEEEe
Confidence 43 789999999999998 46789999999999 9999998544
No 73
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.65 E-value=7e-16 Score=125.43 Aligned_cols=111 Identities=17% Similarity=0.193 Sum_probs=84.6
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCcee
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
.+++.+... +++.+|||+|||+|.++..+ ..+|+|+|+|+. ++.+..++ +.++++++++||
T Consensus 57 ~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~---------~~~~~~~d------~~~~~~~~~~fD 117 (215)
T 2zfu_A 57 RIARDLRQR-PASLVVADFGCGDCRLASSI---RNPVHCFDLASL---------DPRVTVCD------MAQVPLEDESVD 117 (215)
T ss_dssp HHHHHHHTS-CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS---------STTEEESC------TTSCSCCTTCEE
T ss_pred HHHHHHhcc-CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC---------CceEEEec------cccCCCCCCCEe
Confidence 344444432 56678999999999999887 378999999987 56677654 555667788999
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCc-ccHHHHHhhcc
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPE-INESVGAVFKP 152 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~-~~~~~~~~~~~ 152 (262)
+|++..++|+.++..+++++.++|+ |||.+++....... -...+.+++.+
T Consensus 118 ~v~~~~~l~~~~~~~~l~~~~~~L~-~gG~l~i~~~~~~~~~~~~~~~~l~~ 168 (215)
T 2zfu_A 118 VAVFCLSLMGTNIRDFLEEANRVLK-PGGLLKVAEVSSRFEDVRTFLRAVTK 168 (215)
T ss_dssp EEEEESCCCSSCHHHHHHHHHHHEE-EEEEEEEEECGGGCSCHHHHHHHHHH
T ss_pred EEEEehhccccCHHHHHHHHHHhCC-CCeEEEEEEcCCCCCCHHHHHHHHHH
Confidence 9999999998799999999999999 99999986543211 12445555544
No 74
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.64 E-value=5.6e-16 Score=128.96 Aligned_cols=126 Identities=21% Similarity=0.285 Sum_probs=93.0
Q ss_pred ChhhhHHHHHHHHhhCCC----Ch--HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHh
Q 037961 1 MAELFIKQANLYAVARPN----YP--KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 1 ~~~~F~~~a~~Y~~~rp~----yp--~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (262)
|...|+..|+.|+..-+. +. ..++..+.... +++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.++
T Consensus 1 m~~~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~ 80 (252)
T 1wzn_A 1 MYELYTLLAEYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVAR 80 (252)
T ss_dssp CCGGGTTTGGGHHHHTHHHHHTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 556777778888774211 11 12233333332 35689999999999999999999999999999999999987
Q ss_pred cC-----CCceEEeCCCCchhhhhhccCCCCceeeEEEcc-ccccC---ChhHHHHHHHHhhcCCCeEEEE
Q 037961 73 KL-----PNIRYQLTPTMSITELEQNVATQSSVDLVTIAS-ALHWF---DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 73 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~-~~~~~---d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+. .++.+..++ +.+++++ ++||+|++.. .++++ +...+++++.++|+ |||.+++
T Consensus 81 ~~~~~~~~~v~~~~~d------~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~li~ 143 (252)
T 1wzn_A 81 RKAKERNLKIEFLQGD------VLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALK-PGGVFIT 143 (252)
T ss_dssp HHHHHTTCCCEEEESC------GGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEE-EEEEEEE
T ss_pred HHHHhcCCceEEEECC------hhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcC-CCeEEEE
Confidence 53 367888765 4555543 6899999864 44555 35669999999999 9999987
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=2.5e-16 Score=130.15 Aligned_cols=110 Identities=13% Similarity=0.088 Sum_probs=84.5
Q ss_pred HHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~ 93 (262)
..++..+.... .++.+|||||||+|..+..+++.+. +|+|+|+|+.|++.|++. .++.+..++ ++++
T Consensus 47 ~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d------~~~~ 120 (236)
T 1zx0_A 47 TPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL------WEDV 120 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC------HHHH
T ss_pred HHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC------HHHh
Confidence 45555555443 4678999999999999999988654 899999999999999853 456777654 5666
Q ss_pred --cCCCCceeeEEE-ccccc--cC---ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 94 --VATQSSVDLVTI-ASALH--WF---DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 94 --~~~~~~~D~V~~-~~~~~--~~---d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++++++||+|++ .++++ .. +.+.+++++.|+|| |||+|++...
T Consensus 121 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~ 171 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCNL 171 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECCH
T ss_pred hcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcC-CCeEEEEEec
Confidence 778899999999 55532 11 34467999999999 9999998543
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=2e-15 Score=130.17 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=87.4
Q ss_pred HHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh
Q 037961 23 LFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 23 ~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 92 (262)
.++.+.... +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++. .++.+..++ +.+
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~ 151 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG------WED 151 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------GGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------hHH
Confidence 345566554 46789999999999999999987 89999999999999998853 357777765 444
Q ss_pred ccCCCCceeeEEEccccccC---ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 93 NVATQSSVDLVTIASALHWF---DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~---d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++ ++||+|++..++|++ ++..+++++.++|| |||++++....
T Consensus 152 ~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 196 (318)
T 2fk8_A 152 FA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP-ADGRMTVQSSV 196 (318)
T ss_dssp CC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC-TTCEEEEEEEE
T ss_pred CC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcC-CCcEEEEEEec
Confidence 42 789999999999998 56779999999999 99999985543
No 77
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.64 E-value=5.7e-16 Score=132.84 Aligned_cols=103 Identities=10% Similarity=0.096 Sum_probs=78.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC----C--------CceEEeCCCCchhhh--hhc--cC
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL----P--------NIRYQLTPTMSITEL--EQN--VA 95 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----~--------~~~~~~~~~~~~~~~--~~~--~~ 95 (262)
++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++ . ++++.+.+.. +++ +++ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~--~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIR--SDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTT--SSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcc--cchhhhhhhccc
Confidence 4689999999999866665554 57999999999999999863 1 1446565510 122 222 34
Q ss_pred CCCceeeEEEccccccC----ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 96 TQSSVDLVTIASALHWF----DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 96 ~~~~~D~V~~~~~~~~~----d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++++||+|+|..++||+ +...+++++.++|| |||.|++.+..
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lk-pGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTA-SGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 67899999999999986 34679999999999 99999885543
No 78
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.64 E-value=1.3e-15 Score=134.43 Aligned_cols=124 Identities=13% Similarity=0.188 Sum_probs=96.1
Q ss_pred HHHHHHHhhC----CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhh
Q 037961 22 ELFKLIASKT----PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 22 ~~~~~l~~~~----~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~ 92 (262)
.+.+.+.... .++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.++++ .++++..+| +.+
T Consensus 218 ~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D------~~~ 291 (381)
T 3dmg_A 218 LLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSD------VDE 291 (381)
T ss_dssp HHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECS------TTT
T ss_pred HHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcc------hhh
Confidence 3455555433 2677999999999999999999999999999999999999863 247777765 444
Q ss_pred ccCCCCceeeEEEcccccc-----C-ChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 93 NVATQSSVDLVTIASALHW-----F-DLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~-----~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
...++++||+|+++..+|+ . +...+++++.++|| |||.+++.......+...+.+.+..
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lk-pGG~l~iv~n~~l~~~~~l~~~f~~ 356 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLR-PGGVFFLVSNPFLKYEPLLEEKFGA 356 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEE-EEEEEEEEECTTSCHHHHHHHHHSC
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcC-cCcEEEEEEcCCCChHHHHHHhhcc
Confidence 4445689999999999998 4 56679999999999 9999999766654444444444443
No 79
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.64 E-value=1.4e-15 Score=129.08 Aligned_cols=107 Identities=15% Similarity=0.158 Sum_probs=87.3
Q ss_pred hHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhcc
Q 037961 20 PKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 20 p~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~ 94 (262)
...+.+.+... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. .++.+..+| +.+.+
T Consensus 109 ~~~~~~~~~~~--~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d------~~~~~ 180 (286)
T 3m70_A 109 HGDVVDAAKII--SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYD------INAAN 180 (286)
T ss_dssp CHHHHHHHHHS--CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC------GGGCC
T ss_pred HHHHHHHhhcc--CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEec------ccccc
Confidence 35555555432 678899999999999999999999999999999999998753 267777765 55555
Q ss_pred CCCCceeeEEEccccccCCh---hHHHHHHHHhhcCCCeEEEEEe
Q 037961 95 ATQSSVDLVTIASALHWFDL---PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d~---~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+ +++||+|+++.++||++. ..+++++.++|+ |||.+++..
T Consensus 181 ~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~ 223 (286)
T 3m70_A 181 I-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTN-VGGYNLIVA 223 (286)
T ss_dssp C-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred c-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 4 788999999999999943 369999999999 999988744
No 80
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.64 E-value=6.4e-16 Score=126.46 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhc------CCCceEEeCCCCchhhhhhc---cCCCCce
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIK------LPNIRYQLTPTMSITELEQN---VATQSSV 100 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 100 (262)
.+..+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++ ..++.++.+| +.++ .+++++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~D------a~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHD------AVEVLHKMIPDNSL 106 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSC------HHHHHHHHSCTTCE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECC------HHHHHHHHcCCCCh
Confidence 467889999999999999999874 579999999999998874 2578888776 3332 2578999
Q ss_pred eeEEEccccccCChh---------HHHHHHHHhhcCCCeEEEEEecC
Q 037961 101 DLVTIASALHWFDLP---------QFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~~~~~~d~~---------~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|.|+++++..|.... .+++++.++|| |||.|++.+..
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lk-pGG~l~i~td~ 152 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQ-LGGVFHMATDW 152 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcC-CCcEEEEEeCC
Confidence 999999888777322 49999999999 99999986543
No 81
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.64 E-value=2.8e-16 Score=133.71 Aligned_cols=97 Identities=13% Similarity=0.115 Sum_probs=74.1
Q ss_pred CCCeEEEEcCcccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcC-C-------------Cc--------------------
Q 037961 33 KRNLAWDVGTRSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKL-P-------------NI-------------------- 77 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~-~-------------~~-------------------- 77 (262)
++.+|||||||+|..+..++. .+.+|+|+|+|+.|++.|++. . ++
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 668899999999996554444 378999999999999988752 0 01
Q ss_pred --eEEeCCCCchhhhhh-cc-----CCCCceeeEEEcccccc----C-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 78 --RYQLTPTMSITELEQ-NV-----ATQSSVDLVTIASALHW----F-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 78 --~~~~~~~~~~~~~~~-~~-----~~~~~~D~V~~~~~~~~----~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.++.+ |+.. ++ +++++||+|+++.++|| + ++.++++++.++|| |||+|++..
T Consensus 151 ~~~~~~~------D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~ 215 (289)
T 2g72_A 151 VKRVLPI------DVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR-PGGHLLLIG 215 (289)
T ss_dssp EEEEECC------CTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred hceEEec------ccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 12222 3333 33 34567999999999999 6 67889999999999 999999853
No 82
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.4e-15 Score=121.27 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=85.3
Q ss_pred HHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc-
Q 037961 24 FKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV- 94 (262)
Q Consensus 24 ~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~- 94 (262)
++.+.... .++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++ .++++.++| +.++.
T Consensus 34 ~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~~ 107 (189)
T 3p9n_A 34 FNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGA------VAAVVA 107 (189)
T ss_dssp HHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESC------HHHHHH
T ss_pred HHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc------HHHHHh
Confidence 44444332 4678899999999999998887755 799999999999999863 478888876 33322
Q ss_pred -CCCCceeeEEEccccccC--ChhHHHHHHHH--hhcCCCeEEEEEec
Q 037961 95 -ATQSSVDLVTIASALHWF--DLPQFYKQVKW--VLKKPSGVIAAWTY 137 (262)
Q Consensus 95 -~~~~~~D~V~~~~~~~~~--d~~~~l~~~~r--~Lk~pgG~l~i~~~ 137 (262)
+++++||+|+++..+|+. +..++++++.+ +|+ |||.|++-..
T Consensus 108 ~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~-pgG~l~~~~~ 154 (189)
T 3p9n_A 108 AGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTR-EGTVAVVERA 154 (189)
T ss_dssp HCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCC-TTCEEEEEEE
T ss_pred hccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccC-CCeEEEEEec
Confidence 346899999999999885 68889999999 999 9999998443
No 83
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=6.8e-16 Score=121.96 Aligned_cols=108 Identities=11% Similarity=0.133 Sum_probs=87.6
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~ 93 (262)
+++++.+..++++..+|||+|||+|.++..++.. ..+|+|+|+|+.|++.++++ ...++...+ ....
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d------~~~~ 110 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLN------KESD 110 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEEC------CHHH
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEec------cccc
Confidence 6778888888888999999999999999999765 66999999999999999863 111233232 2222
Q ss_pred cCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 94 VATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+.++||+|++...+|.+ +.+.++.++.+.|+ |||.++-+.
T Consensus 111 -~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~-pggvfISfp 152 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFH-TQNFVISFP 152 (200)
T ss_dssp -HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCE-EEEEEEEEE
T ss_pred -CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhC-CCCEEEEeC
Confidence 367889999999999999 66668889999999 999998766
No 84
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.63 E-value=1.5e-15 Score=127.95 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=94.0
Q ss_pred hHHHHHHHHhhCCCCh-----------HHHHHHHHhh--CCCCCeEEEEcCcccHhHHHHHhhC---CeEEEEcCCHH--
Q 037961 5 FIKQANLYAVARPNYP-----------KELFKLIASK--TPKRNLAWDVGTRSGQAAASLAQIY---QHVIATDTSPK-- 66 (262)
Q Consensus 5 F~~~a~~Y~~~rp~yp-----------~~~~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~-- 66 (262)
|+-.+..|.+....-| ......+... .+++.+|||||||+|.++..+++.+ .+|+|+|+|+.
T Consensus 2 ~~~~~~~y~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~ 81 (275)
T 3bkx_A 2 MEKRLDYITDLMALGPTANARTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDY 81 (275)
T ss_dssp CCHHHHHHHTTSCCCSSTTHHHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTC
T ss_pred CcCCHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCcccc
Confidence 3445677877654441 1123333333 3577899999999999999999873 79999999997
Q ss_pred ----HHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 67 ----QLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 67 ----~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
|++.++++ +++.+..++.+ ....+++++++||+|++..++|++ ++..+++.+.++++ |||.+++
T Consensus 82 ~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~-~gG~l~~ 157 (275)
T 3bkx_A 82 GAPLTLGQAWNHLLAGPLGDRLTVHFNTNL---SDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAA-VCDHVDV 157 (275)
T ss_dssp CSSSCHHHHHHHHHTSTTGGGEEEECSCCT---TTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT-TCSEEEE
T ss_pred ccHHHHHHHHHHHHhcCCCCceEEEECChh---hhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhC-CCCEEEE
Confidence 89888753 35777765300 123456678899999999999999 78777777777777 8999998
Q ss_pred EecC
Q 037961 135 WTYT 138 (262)
Q Consensus 135 ~~~~ 138 (262)
....
T Consensus 158 ~~~~ 161 (275)
T 3bkx_A 158 AEWS 161 (275)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5543
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.63 E-value=5.4e-15 Score=119.31 Aligned_cols=111 Identities=21% Similarity=0.246 Sum_probs=89.7
Q ss_pred ChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchh
Q 037961 19 YPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSIT 88 (262)
Q Consensus 19 yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~ 88 (262)
.++++...+.... .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++ .++++..++
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----- 98 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF----- 98 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC-----
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC-----
Confidence 4566666666655 467899999999999999999987 7999999999999999853 568888776
Q ss_pred hhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 89 ELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+.....++||+|++..+++ +...+++++.++|| |||.+++....
T Consensus 99 -~~~~~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~Lk-pgG~l~~~~~~ 144 (204)
T 3e05_A 99 -APEGLDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLK-SEGVIVLNAVT 144 (204)
T ss_dssp -TTTTCTTSCCCSEEEESCCTT--CHHHHHHHHHHHCC-TTCEEEEEECB
T ss_pred -hhhhhhcCCCCCEEEECCCCc--CHHHHHHHHHHhcC-CCeEEEEEecc
Confidence 322222336799999998877 88899999999999 99999996544
No 86
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=3.7e-15 Score=120.63 Aligned_cols=113 Identities=17% Similarity=0.169 Sum_probs=88.0
Q ss_pred CCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------C-CceEEeCCCCc
Q 037961 16 RPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------P-NIRYQLTPTMS 86 (262)
Q Consensus 16 rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~ 86 (262)
.+..++++...+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+++ + ++++..++
T Consensus 36 ~~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--- 112 (204)
T 3njr_A 36 GQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT--- 112 (204)
T ss_dssp SCCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC---
T ss_pred CCCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc---
Confidence 3445566655555543 4678999999999999999999999999999999999998853 4 78888876
Q ss_pred hhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 87 ITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 87 ~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+.+.....++||+|++..++ +.+ +++++.++|| |||.|++.....
T Consensus 113 ---~~~~~~~~~~~D~v~~~~~~---~~~-~l~~~~~~Lk-pgG~lv~~~~~~ 157 (204)
T 3njr_A 113 ---APAALADLPLPEAVFIGGGG---SQA-LYDRLWEWLA-PGTRIVANAVTL 157 (204)
T ss_dssp ---TTGGGTTSCCCSEEEECSCC---CHH-HHHHHHHHSC-TTCEEEEEECSH
T ss_pred ---hhhhcccCCCCCEEEECCcc---cHH-HHHHHHHhcC-CCcEEEEEecCc
Confidence 33322233579999987744 667 9999999999 999999866543
No 87
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.61 E-value=1.6e-15 Score=130.04 Aligned_cols=106 Identities=17% Similarity=0.129 Sum_probs=87.1
Q ss_pred HHHHhhCCCCCeEEEEcCcccHhHHHHH--h-hCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc
Q 037961 25 KLIASKTPKRNLAWDVGTRSGQAAASLA--Q-IYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 25 ~~l~~~~~~~~~vlDvGcG~G~~~~~l~--~-~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 94 (262)
..+....+++.+|||+|||+|..+..++ . .+.+|+|+|+|+.+++.++++ .++++..+| +.+++
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~ 183 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQD------AWKLD 183 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECC------GGGCC
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECc------hhcCC
Confidence 3444456788999999999999999985 2 367999999999999999863 237788765 66666
Q ss_pred CCCCceeeEEEccccccC-ChhH---HHHHHHHhhcCCCeEEEEEecC
Q 037961 95 ATQSSVDLVTIASALHWF-DLPQ---FYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~-d~~~---~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++ ++||+|+++.++|++ ++.. +++++.++|| |||.|++....
T Consensus 184 ~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 229 (305)
T 3ocj_A 184 TR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALK-PGGALVTSFLT 229 (305)
T ss_dssp CC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEECCC
T ss_pred cc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEecC
Confidence 66 899999999999999 7776 7999999999 99999995544
No 88
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.61 E-value=4.2e-15 Score=121.11 Aligned_cols=98 Identities=18% Similarity=0.192 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc------CCCceEEeCCCCchhhhhhcc--CCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK------LPNIRYQLTPTMSITELEQNV--ATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~D 101 (262)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++ ..++.++.+| +.+++ +++++||
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d------~~~l~~~~~~~~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID------ADTLTDVFEPGEVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC------GGGHHHHCCTTSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC------HHHHHhhcCcCCcC
Confidence 46778999999999999999987 6799999999999999875 2578888776 33333 5678999
Q ss_pred eEEEccccccCC---------hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 102 LVTIASALHWFD---------LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 102 ~V~~~~~~~~~d---------~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.|+++.+.+|.. ...+++++.++|| |||.|++.+
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-pgG~l~~~t 153 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMG-KGGSIHFKT 153 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHT-TSCEEEEEE
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcC-CCCEEEEEe
Confidence 999988777763 3578999999999 999999865
No 89
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.61 E-value=3e-15 Score=140.77 Aligned_cols=114 Identities=21% Similarity=0.222 Sum_probs=91.3
Q ss_pred CCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC---CeEEEEcCCHHHHHHHhc------------CCCce
Q 037961 16 RPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY---QHVIATDTSPKQLKFAIK------------LPNIR 78 (262)
Q Consensus 16 rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------------~~~~~ 78 (262)
+|.+....++.+...+ .++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++ .++++
T Consensus 702 sPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 702 KPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp SSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred CchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 4444455566665554 377899999999999999999987 799999999999999976 24677
Q ss_pred EEeCCCCchhhhhhccCCCCceeeEEEccccccCC-hh--HHHHHHHHhhcCCCeEEEEEec
Q 037961 79 YQLTPTMSITELEQNVATQSSVDLVTIASALHWFD-LP--QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d-~~--~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+.++| +.++++++++||+|++..++||++ +. .+++++.++|| || .+++.+.
T Consensus 782 fiqGD------a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK-PG-~LIISTP 835 (950)
T 3htx_A 782 LYDGS------ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH-PK-LLIVSTP 835 (950)
T ss_dssp EEESC------TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC-CS-EEEEEEC
T ss_pred EEECc------hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC-CC-EEEEEec
Confidence 88765 666777889999999999999994 33 38999999999 99 6666443
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=5.3e-15 Score=117.58 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=88.9
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CC--ceEEeCCCCchhhhh
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PN--IRYQLTPTMSITELE 91 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~--~~~~~~~~~~~~~~~ 91 (262)
...+.+.... .++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++. .+ +.+..++ +.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d------~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD------LY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS------TT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc------hh
Confidence 4555565555 3678999999999999999999888999999999999998753 33 7888776 22
Q ss_pred hccCCCCceeeEEEccccccC--ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 92 QNVATQSSVDLVTIASALHWF--DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~--d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+ .+++++||+|+++..+|+. +...+++++.++|+ |||.+++.....
T Consensus 113 ~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 160 (194)
T 1dus_A 113 E-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLK-DNGEIWVVIQTK 160 (194)
T ss_dssp T-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEE-EEEEEEEEEEST
T ss_pred c-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcC-CCCEEEEEECCC
Confidence 2 2346789999999999984 67789999999999 999999866553
No 91
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.60 E-value=3.2e-16 Score=131.77 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC----C-C-----------------------------
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL----P-N----------------------------- 76 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~-~----------------------------- 76 (262)
.++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++. + .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 3667899999999998887777765 799999999999988752 1 1
Q ss_pred -ce-EEeCCCCchhhhhh-ccC---CCCceeeEEEccccccC-----ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 77 -IR-YQLTPTMSITELEQ-NVA---TQSSVDLVTIASALHWF-----DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 77 -~~-~~~~~~~~~~~~~~-~~~---~~~~~D~V~~~~~~~~~-----d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+. +..+| +.. .++ ..++||+|+++.++|++ +..+++++++++|| |||.|++..
T Consensus 134 ~i~~~~~~D------~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK-PGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCD------VHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK-PGGHLVTTV 197 (263)
T ss_dssp HEEEEEECC------TTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred hhheEEecc------ccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEE
Confidence 11 45544 222 122 35689999999999985 34579999999999 999999954
No 92
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.60 E-value=1.4e-14 Score=122.56 Aligned_cols=130 Identities=12% Similarity=0.124 Sum_probs=92.4
Q ss_pred HHHHHHhhCCCChH------HHHHHHHhhC---CCCCeEEEEcCcc---cHhHHHHHhh--CCeEEEEcCCHHHHHHHhc
Q 037961 8 QANLYAVARPNYPK------ELFKLIASKT---PKRNLAWDVGTRS---GQAAASLAQI--YQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 8 ~a~~Y~~~rp~yp~------~~~~~l~~~~---~~~~~vlDvGcG~---G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~ 73 (262)
.++.|.+.-|.|.. .+++.+...+ .....|||||||+ |.++..+++. +.+|+++|+|+.|++.|++
T Consensus 43 ~~~~~~~~~p~~~~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~ 122 (274)
T 2qe6_A 43 LADYACKHIPGLKESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRA 122 (274)
T ss_dssp HHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHhcchhHHHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHH
Confidence 45566666666643 2233333332 2347899999999 9888777664 5799999999999999986
Q ss_pred C----CCceEEeCCCCchhhh----h-hccCCCCceeeEEEccccccC-C--hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 74 L----PNIRYQLTPTMSITEL----E-QNVATQSSVDLVTIASALHWF-D--LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 74 ~----~~~~~~~~~~~~~~~~----~-~~~~~~~~~D~V~~~~~~~~~-d--~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+ .++.++.+|....... + .-.++..+||+|+++.++||+ | +..+++++.++|+ |||.|++....
T Consensus 123 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pGG~l~i~~~~ 198 (274)
T 2qe6_A 123 LLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA-PGSYLFMTSLV 198 (274)
T ss_dssp HHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC-TTCEEEEEEEB
T ss_pred hcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCC-CCcEEEEEEec
Confidence 3 5788998872111101 0 001233589999999999999 5 6789999999999 99999985544
No 93
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.60 E-value=9.2e-15 Score=114.84 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=88.1
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCcee
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
.+++.+.....++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..++++.++| +.+ ++++++||
T Consensus 12 ~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~---~~~~~~~~~d------~~~-~~~~~~fD 80 (170)
T 3q87_B 12 TLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES---HRGGNLVRAD------LLC-SINQESVD 80 (170)
T ss_dssp HHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT---CSSSCEEECS------TTT-TBCGGGCS
T ss_pred HHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc---ccCCeEEECC------hhh-hcccCCCC
Confidence 3455543333456799999999999999999999 99999999999988 5678888876 333 34568999
Q ss_pred eEEEccccccC-Ch---------hHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 102 LVTIASALHWF-DL---------PQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 102 ~V~~~~~~~~~-d~---------~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
+|+++..+||. +. ..+++++.+.| |||.+++....... .+.+.+++.+
T Consensus 81 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--pgG~l~~~~~~~~~-~~~l~~~l~~ 138 (170)
T 3q87_B 81 VVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV--TVGMLYLLVIEANR-PKEVLARLEE 138 (170)
T ss_dssp EEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC--CSSEEEEEEEGGGC-HHHHHHHHHH
T ss_pred EEEECCCCccCCccccccCCcchHHHHHHHHhhC--CCCEEEEEEecCCC-HHHHHHHHHH
Confidence 99999999987 43 46889999998 79999985543322 2444455444
No 94
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.59 E-value=1.3e-15 Score=133.52 Aligned_cols=120 Identities=10% Similarity=0.057 Sum_probs=90.6
Q ss_pred hhhHHHHHHHH--hhC-C-CChHHHHHHHH-hhCCCCCeEEEEcCc------ccHhHHHHHhh---CCeEEEEcCCHHHH
Q 037961 3 ELFIKQANLYA--VAR-P-NYPKELFKLIA-SKTPKRNLAWDVGTR------SGQAAASLAQI---YQHVIATDTSPKQL 68 (262)
Q Consensus 3 ~~F~~~a~~Y~--~~r-p-~yp~~~~~~l~-~~~~~~~~vlDvGcG------~G~~~~~l~~~---~~~v~~vD~s~~~~ 68 (262)
..|++.|..|. +.+ . .| ..+++.++ ....+..+||||||| +|..+..++.. ..+|+|+|+|+.|.
T Consensus 182 ~~fd~lA~~Y~tDK~~~~h~y-~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 182 PDLSELSSRYFTPKFGFLHWF-TPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp CCHHHHHHHTTCTTBSSSCBC-HHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred ccHHHHHHHhCCCcccccchH-HHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 35889999995 554 2 25 44555554 444577899999999 66666666653 57999999999984
Q ss_pred HHHhcCCCceEEeCCCCchhhhhhccCC------CCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 69 KFAIKLPNIRYQLTPTMSITELEQNVAT------QSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
...++++++++| +.++++. +++||+|++..+ |+. +..+++++++++|| |||+|++
T Consensus 261 ---~~~~rI~fv~GD------a~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLK-PGGvlVi 322 (419)
T 3sso_A 261 ---VDELRIRTIQGD------QNDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVR-PGGLYVI 322 (419)
T ss_dssp ---GCBTTEEEEECC------TTCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred ---hcCCCcEEEEec------ccccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcC-CCeEEEE
Confidence 345789999887 3333333 578999998755 655 88999999999999 9999998
No 95
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.59 E-value=9e-15 Score=114.99 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=83.3
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------C-CceEEeCCCCchhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------P-NIRYQLTPTMSITE 89 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~ 89 (262)
+++...+.... .++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++. + ++ +..++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~----- 84 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGA----- 84 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCT-----
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecch-----
Confidence 44445555443 46779999999999999999987 67999999999999998852 2 55 666541
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.+.++..+++||+|+++.++|+ ..+++++.++|| |||.+++.....
T Consensus 85 ~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~-~gG~l~~~~~~~ 130 (178)
T 3hm2_A 85 PRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLP-VGGRLVANAVTV 130 (178)
T ss_dssp TGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCC-TTCEEEEEECSH
T ss_pred HhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcC-CCCEEEEEeecc
Confidence 1233323378999999999988 889999999999 999999865543
No 96
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=2.3e-15 Score=121.54 Aligned_cols=99 Identities=14% Similarity=0.020 Sum_probs=79.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC--------CCceEEeCCCCchhhhhhcc--CCCCc-e
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL--------PNIRYQLTPTMSITELEQNV--ATQSS-V 100 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 100 (262)
++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|+++ .++++..+| +.++. +++++ |
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~~~f 126 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQS------SLDFLKQPQNQPHF 126 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSC------HHHHTTSCCSSCCE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECC------HHHHHHhhccCCCC
Confidence 56789999999999999877776 5899999999999999853 467787765 43332 23578 9
Q ss_pred eeEEEccccccCChhHHHHHH--HHhhcCCCeEEEEEecC
Q 037961 101 DLVTIASALHWFDLPQFYKQV--KWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~~~~~~d~~~~l~~~--~r~Lk~pgG~l~i~~~~ 138 (262)
|+|+++..++.-+...+++.+ .++|+ |||.+++....
T Consensus 127 D~I~~~~~~~~~~~~~~l~~~~~~~~Lk-pgG~l~i~~~~ 165 (201)
T 2ift_A 127 DVVFLDPPFHFNLAEQAISLLCENNWLK-PNALIYVETEK 165 (201)
T ss_dssp EEEEECCCSSSCHHHHHHHHHHHTTCEE-EEEEEEEEEES
T ss_pred CEEEECCCCCCccHHHHHHHHHhcCccC-CCcEEEEEECC
Confidence 999999887754777889998 67899 99999985543
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=6.3e-15 Score=122.10 Aligned_cols=95 Identities=23% Similarity=0.230 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCcccHhHHHHHh--hCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCC---CCce
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQ--IYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVAT---QSSV 100 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~--~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~ 100 (262)
+++.+|||+|||+|..+..++. .+.+|+|+|+|+.|++.+++. .+++++.++ +++++.+ +++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDR------AETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESC------HHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEecc------HHHhcccccccCCc
Confidence 3678999999999999999985 467999999999999998752 468888765 5555433 5789
Q ss_pred eeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 101 DLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 101 D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+|++.. ..+...+++++.++|+ |||.|+++.
T Consensus 143 D~V~~~~---~~~~~~~l~~~~~~Lk-pgG~l~~~~ 174 (240)
T 1xdz_A 143 DIVTARA---VARLSVLSELCLPLVK-KNGLFVALK 174 (240)
T ss_dssp EEEEEEC---CSCHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred cEEEEec---cCCHHHHHHHHHHhcC-CCCEEEEEe
Confidence 9999865 2488999999999999 999999864
No 98
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=1e-14 Score=113.83 Aligned_cols=119 Identities=17% Similarity=0.192 Sum_probs=87.6
Q ss_pred hCCCChHHHHHHHHh----hCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCC
Q 037961 15 ARPNYPKELFKLIAS----KTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTM 85 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~----~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~ 85 (262)
.||.. +.+.+.+.. ..+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.++++ .++++..++.
T Consensus 20 ~~~~~-~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~- 97 (171)
T 1ws6_A 20 ARPSP-VRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV- 97 (171)
T ss_dssp CCCCC-HHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH-
T ss_pred CCCCH-HHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccH-
Confidence 45554 344444333 334778999999999999999999988899999999999999863 1678887761
Q ss_pred chhh-hhhccCCCCceeeEEEccccccCChhHHHHHHH--HhhcCCCeEEEEEecCC
Q 037961 86 SITE-LEQNVATQSSVDLVTIASALHWFDLPQFYKQVK--WVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 86 ~~~~-~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~--r~Lk~pgG~l~i~~~~~ 139 (262)
.+ ....+-..++||+|+++..+| -+.+.+++.+. ++|+ |||.+++.....
T Consensus 98 --~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~-~gG~~~~~~~~~ 150 (171)
T 1ws6_A 98 --EVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVE-AGGLYVLQHPKD 150 (171)
T ss_dssp --HHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEE-EEEEEEEEEETT
T ss_pred --HHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccC-CCcEEEEEeCCc
Confidence 11 111111235899999998887 66777888888 9999 999999855543
No 99
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=1.4e-14 Score=118.80 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=82.9
Q ss_pred HhhCCCCCeEEEEcCc-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccCCCCce
Q 037961 28 ASKTPKRNLAWDVGTR-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 28 ~~~~~~~~~vlDvGcG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (262)
....+++.+|||+||| +|.++..++.. +.+|+|+|+|+.+++.|+++ .++++..+|.. .. .++++++|
T Consensus 50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~---~~--~~~~~~~f 124 (230)
T 3evz_A 50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG---II--KGVVEGTF 124 (230)
T ss_dssp HTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC---SS--TTTCCSCE
T ss_pred HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch---hh--hhcccCce
Confidence 4445788999999999 99999999998 89999999999999999853 26888887610 11 12356899
Q ss_pred eeEEEccccccCC--------------------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 101 DLVTIASALHWFD--------------------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~~~~~~d--------------------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|+|+++..+++.. ...+++++.++|| |||.+++....
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 181 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN-PGGKVALYLPD 181 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEE-EEEEEEEEEES
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 9999998887652 3779999999999 99999985543
No 100
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.58 E-value=1.3e-14 Score=122.98 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=77.6
Q ss_pred hCCCCCeEEEEcCcccHhHH-HHHh-hCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCcee
Q 037961 30 KTPKRNLAWDVGTRSGQAAA-SLAQ-IYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~G~~~~-~l~~-~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
.++++.+|||||||+|.++. .+++ .+++|+|+|+|+.|++.|+++ .++++++++ +.+++ +++||
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD------a~~l~--d~~FD 190 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD------ETVID--GLEFD 190 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC------GGGGG--GCCCS
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc------hhhCC--CCCcC
Confidence 45788999999999987664 4555 488999999999999999863 578888775 44443 68899
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+|++... --+..++++++.++|| |||+|++-.
T Consensus 191 vV~~~a~--~~d~~~~l~el~r~Lk-PGG~Lvv~~ 222 (298)
T 3fpf_A 191 VLMVAAL--AEPKRRVFRNIHRYVD-TETRIIYRT 222 (298)
T ss_dssp EEEECTT--CSCHHHHHHHHHHHCC-TTCEEEEEE
T ss_pred EEEECCC--ccCHHHHHHHHHHHcC-CCcEEEEEc
Confidence 9998654 2388899999999999 999999844
No 101
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.58 E-value=6.8e-15 Score=124.70 Aligned_cols=109 Identities=18% Similarity=0.155 Sum_probs=79.2
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHH-hcCCCceEEeCCCCchhhhhhccCCC
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFA-IKLPNIRYQLTPTMSITELEQNVATQ 97 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (262)
++...+.... .++.+|||+|||||.+|..+++.++ +|+|+|+|+.|++.+ ++.+++.............+. ++.
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~--l~~ 149 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVD--FTE 149 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGG--CTT
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhh--CCC
Confidence 4444444332 3567999999999999999999875 899999999999984 444555444322111111222 244
Q ss_pred CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 98 SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
.+||+|++..++|+ ...++.++.|+|| |||.|++.
T Consensus 150 ~~fD~v~~d~sf~s--l~~vL~e~~rvLk-pGG~lv~l 184 (291)
T 3hp7_A 150 GLPSFASIDVSFIS--LNLILPALAKILV-DGGQVVAL 184 (291)
T ss_dssp CCCSEEEECCSSSC--GGGTHHHHHHHSC-TTCEEEEE
T ss_pred CCCCEEEEEeeHhh--HHHHHHHHHHHcC-cCCEEEEE
Confidence 56999999988775 5889999999999 99999884
No 102
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=9.5e-15 Score=118.78 Aligned_cols=98 Identities=19% Similarity=0.179 Sum_probs=72.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHH----HHHhcCCCceEEeCCCCchhhhhh-ccCCCCceeeEE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQL----KFAIKLPNIRYQLTPTMSITELEQ-NVATQSSVDLVT 104 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~----~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~V~ 104 (262)
+++.+|||+|||+|..+..+++.. .+|+|+|+|+.|+ +.+++..++.++.+|.. +... .++. ++||+|+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~---~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS---KPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT---CGGGTTTTC-CCEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCC---Cchhhcccc-cceeEEE
Confidence 577899999999999999998874 6899999999865 44555667887776511 1111 2333 7899999
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
++...+ .+...+++++.++|| |||.|++.
T Consensus 132 ~~~~~~-~~~~~~l~~~~r~Lk-pgG~l~i~ 160 (210)
T 1nt2_A 132 QDIAQK-NQIEILKANAEFFLK-EKGEVVIM 160 (210)
T ss_dssp ECCCST-THHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EeccCh-hHHHHHHHHHHHHhC-CCCEEEEE
Confidence 984222 123346899999999 99999985
No 103
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.58 E-value=2.5e-15 Score=125.66 Aligned_cols=98 Identities=17% Similarity=0.112 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC---CC-------------------------------
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL---PN------------------------------- 76 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~------------------------------- 76 (262)
.++.+|||+|||+|..+..++..+. +|+|+|+|+.|++.+++. ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 3567899999999999999998887 999999999999998752 11
Q ss_pred -c-eEEeCCCCchhhhhhc-cCCC---CceeeEEEccccc----cC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 77 -I-RYQLTPTMSITELEQN-VATQ---SSVDLVTIASALH----WF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 77 -~-~~~~~~~~~~~~~~~~-~~~~---~~~D~V~~~~~~~----~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+ .+..++ +.+. ++++ ++||+|++..++| +. ++..+++++.++|| |||.|++..
T Consensus 135 ~v~~~~~~d------~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCD------VTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK-PGGFLVMVD 198 (265)
T ss_dssp HEEEEEECC------TTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred hheeEEEee------eccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEe
Confidence 5 677665 3222 2234 7899999999999 55 67789999999999 999999855
No 104
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.57 E-value=6.6e-15 Score=116.71 Aligned_cols=120 Identities=18% Similarity=0.132 Sum_probs=90.1
Q ss_pred hCCCChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-------CCceEEeCC
Q 037961 15 ARPNYPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-------PNIRYQLTP 83 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (262)
.||.. +.+.+.+...+ .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++ +++++..+|
T Consensus 24 ~rp~~-~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 102 (187)
T 2fhp_A 24 TRPTT-DKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD 102 (187)
T ss_dssp SCCCC-HHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred cCcCH-HHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECc
Confidence 46654 56666665544 367899999999999999988875 5899999999999998853 357888876
Q ss_pred CCchhhhhhccCCCCceeeEEEccccccCChhHHHHHH--HHhhcCCCeEEEEEecC
Q 037961 84 TMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQV--KWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 84 ~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~--~r~Lk~pgG~l~i~~~~ 138 (262)
... ....++.++++||+|+++..++..+....++.+ .++|+ |||.+++....
T Consensus 103 ~~~--~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~ 156 (187)
T 2fhp_A 103 ANR--ALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLT-NEAVIVCETDK 156 (187)
T ss_dssp HHH--HHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEE-EEEEEEEEEET
T ss_pred HHH--HHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccC-CCCEEEEEeCC
Confidence 100 011122236789999999887766888888888 88999 99999985544
No 105
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.57 E-value=1.4e-14 Score=119.07 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=89.6
Q ss_pred HHhhCCCChHHHHHHHHhh-----CCCCCeEEEEcCcccHhHHHHHhh-C--CeEEEEcCCHHHHHHHhc----CCCceE
Q 037961 12 YAVARPNYPKELFKLIASK-----TPKRNLAWDVGTRSGQAAASLAQI-Y--QHVIATDTSPKQLKFAIK----LPNIRY 79 (262)
Q Consensus 12 Y~~~rp~yp~~~~~~l~~~-----~~~~~~vlDvGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~----~~~~~~ 79 (262)
|..+-|.. .++...|+.- ++++.+|||+|||+|.++..+++. | .+|+|+|+++.|++.+++ .+++..
T Consensus 52 ~r~w~p~r-sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~ 130 (233)
T 4df3_A 52 YREWNAYR-SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFP 130 (233)
T ss_dssp EEECCTTT-CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEE
T ss_pred eeeECCCc-hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeE
Confidence 33444433 3455555442 268999999999999999999986 3 579999999999998864 468888
Q ss_pred EeCCCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 80 QLTPTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.++. .+.+..+...+++|+|++....++ ++..++.++.++|| |||.+++.
T Consensus 131 V~~d~---~~p~~~~~~~~~vDvVf~d~~~~~-~~~~~l~~~~r~LK-pGG~lvI~ 181 (233)
T 4df3_A 131 ILGDA---RFPEKYRHLVEGVDGLYADVAQPE-QAAIVVRNARFFLR-DGGYMLMA 181 (233)
T ss_dssp EESCT---TCGGGGTTTCCCEEEEEECCCCTT-HHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEEec---cCccccccccceEEEEEEeccCCh-hHHHHHHHHHHhcc-CCCEEEEE
Confidence 87762 334556667789999997654433 67789999999999 99999984
No 106
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=1.7e-14 Score=116.73 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=85.0
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~ 92 (262)
+.+...+.... .++.+|||+|||+|..+..+++.+.+|+++|+|+.+++.++++ .++.+..+| +..
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~ 136 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD------GWQ 136 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC------ccc
Confidence 44555555554 4778999999999999999999999999999999999998852 467888775 333
Q ss_pred ccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 93 NVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
...++++||+|++..++|++.. ++.++|| |||+|++....
T Consensus 137 ~~~~~~~~D~i~~~~~~~~~~~-----~~~~~L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 137 GWQARAPFDAIIVTAAPPEIPT-----ALMTQLD-EGGILVLPVGE 176 (210)
T ss_dssp CCGGGCCEEEEEESSBCSSCCT-----HHHHTEE-EEEEEEEEECS
T ss_pred CCccCCCccEEEEccchhhhhH-----HHHHhcc-cCcEEEEEEcC
Confidence 3334678999999999999843 5899999 99999985433
No 107
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=8.4e-15 Score=118.28 Aligned_cols=115 Identities=12% Similarity=-0.003 Sum_probs=85.0
Q ss_pred hCCCChHHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC------CCceEEeCCC
Q 037961 15 ARPNYPKELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL------PNIRYQLTPT 84 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~ 84 (262)
.||.. +.+.+.+...+ .++.+|||+|||+|.++..++..+ .+|+++|+|+.|++.|+++ .++++..+|
T Consensus 34 ~rp~~-~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D- 111 (202)
T 2fpo_A 34 LRPTT-DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSN- 111 (202)
T ss_dssp ----C-HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC-
T ss_pred CCCCH-HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECC-
Confidence 35544 44444444333 156789999999999999887776 4999999999999999853 367888765
Q ss_pred Cchhhhhh-ccCCCCceeeEEEccccccCChhHHHHHHHH--hhcCCCeEEEEEec
Q 037961 85 MSITELEQ-NVATQSSVDLVTIASALHWFDLPQFYKQVKW--VLKKPSGVIAAWTY 137 (262)
Q Consensus 85 ~~~~~~~~-~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r--~Lk~pgG~l~i~~~ 137 (262)
+.+ ++..+++||+|+++..+|+-+...+++.+.+ +|+ |||.|++...
T Consensus 112 -----~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~-pgG~l~i~~~ 161 (202)
T 2fpo_A 112 -----AMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLA-DEALIYVESE 161 (202)
T ss_dssp -----HHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEE-EEEEEEEEEE
T ss_pred -----HHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccC-CCcEEEEEEC
Confidence 433 3445678999999988776578888999876 599 9999998543
No 108
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=1.3e-14 Score=122.34 Aligned_cols=95 Identities=20% Similarity=0.302 Sum_probs=73.9
Q ss_pred CCCeEEEEcCcccH----hHHHHHhh------CCeEEEEcCCHHHHHHHhcCC---------------------------
Q 037961 33 KRNLAWDVGTRSGQ----AAASLAQI------YQHVIATDTSPKQLKFAIKLP--------------------------- 75 (262)
Q Consensus 33 ~~~~vlDvGcG~G~----~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~--------------------------- 75 (262)
+..+|||+|||||. ++..|++. +.+|+|+|+|+.|++.|++..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 56666654 358999999999999998631
Q ss_pred ----------CceEEeCCCCchhhhhhccCC-CCceeeEEEccccccCChh---HHHHHHHHhhcCCCeEEEE
Q 037961 76 ----------NIRYQLTPTMSITELEQNVAT-QSSVDLVTIASALHWFDLP---QFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 76 ----------~~~~~~~~~~~~~~~~~~~~~-~~~~D~V~~~~~~~~~d~~---~~l~~~~r~Lk~pgG~l~i 134 (262)
++.|..++ +.+.+++ .++||+|+|.++++|++++ ++++++.++|+ |||.|++
T Consensus 185 ~~~v~~~lr~~V~F~~~d------l~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~-pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVN------LLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK-PDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECC------TTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred ceeechhhcccCeEEecc------cCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 24444443 4443343 5789999999999999654 69999999999 9999988
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.57 E-value=9.5e-15 Score=117.88 Aligned_cols=107 Identities=22% Similarity=0.146 Sum_probs=87.0
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~ 93 (262)
..+.+.+....+++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++ .++++..++ +..
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~- 120 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTS------LLA- 120 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS------TTT-
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecc------ccc-
Confidence 445666776677889999999999999999998755 999999999999998853 348888776 222
Q ss_pred cCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 94 VATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
..+++||+|+++..+|++ ..+++++.++|+ |||.+++....
T Consensus 121 -~~~~~fD~i~~~~~~~~~--~~~l~~~~~~L~-~gG~l~~~~~~ 161 (205)
T 3grz_A 121 -DVDGKFDLIVANILAEIL--LDLIPQLDSHLN-EDGQVIFSGID 161 (205)
T ss_dssp -TCCSCEEEEEEESCHHHH--HHHGGGSGGGEE-EEEEEEEEEEE
T ss_pred -cCCCCceEEEECCcHHHH--HHHHHHHHHhcC-CCCEEEEEecC
Confidence 245789999999888774 778999999999 99999985443
No 110
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.56 E-value=4.1e-15 Score=130.68 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=82.7
Q ss_pred HHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-CC-eEEEEcCCHHHHHHHhc---------------CCCceEEeCC
Q 037961 23 LFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-YQ-HVIATDTSPKQLKFAIK---------------LPNIRYQLTP 83 (262)
Q Consensus 23 ~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~---------------~~~~~~~~~~ 83 (262)
.+..++..+ .++.+|||||||+|..+..++.. ++ +|+|||+|+.|++.|++ ..+++++++|
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 344444443 57889999999999999999864 55 59999999999988864 1568888877
Q ss_pred CCchhhhhhccCCC--CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 84 TMSITELEQNVATQ--SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 84 ~~~~~~~~~~~~~~--~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.+.++++ ..||+|+++..+++-+....+.+++|+|| |||+|++.
T Consensus 241 ------~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK-PGGrIVss 287 (438)
T 3uwp_A 241 ------FLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK-EGGRIVSS 287 (438)
T ss_dssp ------TTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC-TTCEEEES
T ss_pred ------ccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCC-CCcEEEEe
Confidence 33333322 36999999888776688889999999999 99999984
No 111
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.56 E-value=2.3e-14 Score=114.85 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=81.7
Q ss_pred HhhCCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc-CC
Q 037961 28 ASKTPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV-AT 96 (262)
Q Consensus 28 ~~~~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~-~~ 96 (262)
....+++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.|+++ .++++..+| +.+++ ..
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~ 90 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG------HQNMDKYI 90 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC------GGGGGGTC
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC------HHHHhhhc
Confidence 334577889999999999999999886 25999999999999999863 467888765 44443 45
Q ss_pred CCceeeEEEccccc-----cC-----ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 97 QSSVDLVTIASALH-----WF-----DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 97 ~~~~D~V~~~~~~~-----~~-----d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+++||+|+++.++. +. +...+++++.++|| |||++++..+.
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-~gG~l~~~~~~ 141 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLV-TGGIITVVIYY 141 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCc-CCCEEEEEEcc
Confidence 68899999987661 11 23469999999999 99999986554
No 112
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.56 E-value=2.4e-14 Score=116.39 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc--CCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV--ATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~D 101 (262)
+++.+|||+|||+|.++..++.. +.+++|+|+|+.+++.|+++ .++.++.++ +.+++ +++++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD------GSDLTDYFEDGEID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC------SSCGGGTSCTTCCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC------HHHHHhhcCCCCCC
Confidence 45788999999999999999987 47999999999999998752 578888876 33333 5678899
Q ss_pred eEEEccccccCC---------hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 102 LVTIASALHWFD---------LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 102 ~V~~~~~~~~~d---------~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+|+++...+|.. ...+++++.++|+ |||.|++.+
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 156 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILP-ENGEIHFKT 156 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSC-TTCEEEEEE
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcC-CCcEEEEEe
Confidence 999998877763 2579999999999 999998854
No 113
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=3.6e-16 Score=129.45 Aligned_cols=94 Identities=16% Similarity=0.102 Sum_probs=81.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~ 105 (262)
++.+|||+|||+|..+..++..+.+|+|+|+|+.|++.|+++ .++.+..+| +.+++ ++++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGD------FLLLA-SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC------HHHHG-GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECC------hHHhc-ccCCCCEEEE
Confidence 678999999999999999999999999999999999998853 368888775 44444 5678999999
Q ss_pred ccccccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 106 ASALHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 106 ~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+.++|+. +....+.++.++|+ |||.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~-pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMS-PDGFEIF 179 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCS-SCHHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcC-CcceeHH
Confidence 9999999 66668889999999 9999665
No 114
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.55 E-value=5.9e-15 Score=116.25 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-ccCCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ-NVATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~D~ 102 (262)
.++.+|||+|||+|..+..+++.+ .+|+|+|+|+.|++.|+++ .++.+..+| +.+ ++..+++||+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d------~~~~~~~~~~~fD~ 103 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME------AERAIDCLTGRFDL 103 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC------HHHHHHHBCSCEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECc------HHHhHHhhcCCCCE
Confidence 467899999999999999999885 5999999999999998852 257777765 333 2223467999
Q ss_pred EEEccccccCChhHHHHHHH--HhhcCCCeEEEEEecC
Q 037961 103 VTIASALHWFDLPQFYKQVK--WVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~~~~~d~~~~l~~~~--r~Lk~pgG~l~i~~~~ 138 (262)
|+++..+++.+...+++.+. ++|+ |||.+++....
T Consensus 104 i~~~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~ 140 (177)
T 2esr_A 104 VFLDPPYAKETIVATIEALAAKNLLS-EQVMVVCETDK 140 (177)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTTCEE-EEEEEEEEEET
T ss_pred EEECCCCCcchHHHHHHHHHhCCCcC-CCcEEEEEECC
Confidence 99998876556677888887 9999 99999985544
No 115
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.55 E-value=6.4e-15 Score=115.24 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=80.2
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhcc--CCCCceeeEEE
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNV--ATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~D~V~~ 105 (262)
..++.+|||+|||+|.++..+++. +.+++++|+++ |++ .+++.+..++.......+.++ +++++||+|++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 457789999999999999999887 37999999999 753 267888877621111111111 46789999999
Q ss_pred ccccccC-Ch-----------hHHHHHHHHhhcCCCeEEEEEecCCCc
Q 037961 106 ASALHWF-DL-----------PQFYKQVKWVLKKPSGVIAAWTYTMPE 141 (262)
Q Consensus 106 ~~~~~~~-d~-----------~~~l~~~~r~Lk~pgG~l~i~~~~~~~ 141 (262)
+..+||+ +. ..+++++.++|+ |||.+++.......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQGEG 141 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEESSTT
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEecCCc
Confidence 9999988 55 689999999999 99999986655433
No 116
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.55 E-value=1.6e-14 Score=117.56 Aligned_cols=106 Identities=18% Similarity=0.297 Sum_probs=80.9
Q ss_pred ChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHH----hc------CCCceEEeCCCCc
Q 037961 19 YPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFA----IK------LPNIRYQLTPTMS 86 (262)
Q Consensus 19 yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a----~~------~~~~~~~~~~~~~ 86 (262)
+....++.+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+ ++ .+++.+.++|
T Consensus 15 ~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d--- 89 (218)
T 3mq2_A 15 FSDAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWAT--- 89 (218)
T ss_dssp CCHHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECC---
T ss_pred cCHHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecc---
Confidence 3345555553 356788999999999999999998 67999999999988852 22 2478888765
Q ss_pred hhhhhhccCCCCceeeEEEcc---cc--ccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 87 ITELEQNVATQSSVDLVTIAS---AL--HWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 87 ~~~~~~~~~~~~~~D~V~~~~---~~--~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++++++++++ |.|.... .. ||+ |+..+++++.++|| |||.|++
T Consensus 90 ---~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~ 138 (218)
T 3mq2_A 90 ---AERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCR-PGASFLV 138 (218)
T ss_dssp ---STTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEE-EEEEEEE
T ss_pred ---hhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcC-CCcEEEE
Confidence 5666666666 7766433 22 256 88999999999999 9999998
No 117
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.54 E-value=3e-14 Score=114.43 Aligned_cols=111 Identities=14% Similarity=0.221 Sum_probs=80.9
Q ss_pred CCCChHHHHHHHHhh--CCCCCeEEEEcCcccHhHHHHHhh----CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhh
Q 037961 16 RPNYPKELFKLIASK--TPKRNLAWDVGTRSGQAAASLAQI----YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITE 89 (262)
Q Consensus 16 rp~yp~~~~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 89 (262)
|++-.-++.+.+..+ .+++.+|||+|||+|.++..+++. ..+|+|+|+|+.+ ..+++.+.+++
T Consensus 3 ~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----~~~~v~~~~~d------ 71 (201)
T 2plw_A 3 RSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----PIPNVYFIQGE------ 71 (201)
T ss_dssp CSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----CCTTCEEEECC------
T ss_pred chHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----CCCCceEEEcc------
Confidence 333334455544443 467789999999999999999986 3689999999832 24578888876
Q ss_pred hhhcc-------------------------CCCCceeeEEEccccccC-----Chh-------HHHHHHHHhhcCCCeEE
Q 037961 90 LEQNV-------------------------ATQSSVDLVTIASALHWF-----DLP-------QFYKQVKWVLKKPSGVI 132 (262)
Q Consensus 90 ~~~~~-------------------------~~~~~~D~V~~~~~~~~~-----d~~-------~~l~~~~r~Lk~pgG~l 132 (262)
+.+.+ +++++||+|+++.++||. |.. .+++++.++|| |||.|
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk-pgG~l 150 (201)
T 2plw_A 72 IGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYIN-IGGTY 150 (201)
T ss_dssp TTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEE
T ss_pred ccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEE
Confidence 11111 356789999999998884 222 37889999999 99999
Q ss_pred EEEecC
Q 037961 133 AAWTYT 138 (262)
Q Consensus 133 ~i~~~~ 138 (262)
++..+.
T Consensus 151 v~~~~~ 156 (201)
T 2plw_A 151 IVKMYL 156 (201)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 985444
No 118
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=117.76 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc------------CCCceEEeCCCCchhhhhh-cc--
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK------------LPNIRYQLTPTMSITELEQ-NV-- 94 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~------------~~~~~~~~~~~~~~~~~~~-~~-- 94 (262)
.+..+|||||||+|.++..+++. ..+|+|+|+|+.|++.|++ ..++.++.+| +.. ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d------~~~~l~~~ 118 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSN------AMKHLPNF 118 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECC------TTTCHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECc------HHHhhhhh
Confidence 45678999999999999999987 4689999999999997752 3578888876 332 33
Q ss_pred CCCCceeeEEEccccccCC---------hhHHHHHHHHhhcCCCeEEEEEec
Q 037961 95 ATQSSVDLVTIASALHWFD---------LPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d---------~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+++++||.|++...-.|.. ...+++++.++|| |||.|++.+.
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lk-pGG~l~~~td 169 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLR-VGGLVYTITD 169 (235)
T ss_dssp CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCC-CCCEEEEEeC
Confidence 5788999999887766652 2479999999999 9999998553
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.54 E-value=2.6e-14 Score=124.49 Aligned_cols=94 Identities=20% Similarity=0.154 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ |++.|++. .+++++.++ ++++++++++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d------~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGK------IEEVHLPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESC------TTTSCCSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEee------HHHhcCCCCcEEEE
Confidence 5678999999999999999999875 899999996 99988752 578888765 55566677899999
Q ss_pred EEcc---ccccC-ChhHHHHHHHHhhcCCCeEEE
Q 037961 104 TIAS---ALHWF-DLPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 104 ~~~~---~~~~~-d~~~~l~~~~r~Lk~pgG~l~ 133 (262)
++.. .+++. +...++.++.++|| |||.++
T Consensus 136 vs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred EEcCchhhccCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 9876 44555 56779999999999 999987
No 120
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=8.9e-15 Score=118.23 Aligned_cols=122 Identities=17% Similarity=0.104 Sum_probs=75.9
Q ss_pred HHHHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCC-----CceEEeCCCCchhhh
Q 037961 21 KELFKLIASKT---PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKLP-----NIRYQLTPTMSITEL 90 (262)
Q Consensus 21 ~~~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~~~~~~~~ 90 (262)
+.+++.+...+ .++.+|||+|||+|..+..+++. +.+++|+|+|+.|++.++++. ++++.. +|+
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~------~d~ 88 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAA------ADG 88 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCH------HHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEE------cch
Confidence 34566666554 56789999999999999999998 559999999999999998642 234443 455
Q ss_pred hhccCCC-----CceeeEEEccccccC-Ch--------------------------hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 91 EQNVATQ-----SSVDLVTIASALHWF-DL--------------------------PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 91 ~~~~~~~-----~~~D~V~~~~~~~~~-d~--------------------------~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.+ ++++ ++||+|+++..+++. +. ..+++++.++|| |||.+++....
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 166 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA-RGRAGVFLEVG 166 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBC-SSSEEEEEECT
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc-CCCeEEEEEEC
Confidence 54 3344 899999998777654 21 678899999999 99995544433
Q ss_pred CCcccHHHHHhhc
Q 037961 139 MPEINESVGAVFK 151 (262)
Q Consensus 139 ~~~~~~~~~~~~~ 151 (262)
... .+.+.+++.
T Consensus 167 ~~~-~~~~~~~l~ 178 (215)
T 4dzr_A 167 HNQ-ADEVARLFA 178 (215)
T ss_dssp TSC-HHHHHHHTG
T ss_pred Ccc-HHHHHHHHH
Confidence 222 244444444
No 121
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.53 E-value=5.5e-14 Score=115.40 Aligned_cols=106 Identities=20% Similarity=0.164 Sum_probs=84.4
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhcc
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+.+...+.... .++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.+++. .++.+..++ +....
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d------~~~~~ 129 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGD------GTLGY 129 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESC------GGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECC------ccccc
Confidence 45566665554 4678999999999999999999999999999999999999863 267788765 33311
Q ss_pred CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 95 ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
..+++||+|++..++|++. .++.++|+ |||.+++....
T Consensus 130 ~~~~~fD~v~~~~~~~~~~-----~~~~~~L~-pgG~l~~~~~~ 167 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL-----CKPYEQLK-EGGIMILPIGV 167 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC-----HHHHHTEE-EEEEEEEEECS
T ss_pred ccCCCccEEEECCcHHHHH-----HHHHHHcC-CCcEEEEEEcC
Confidence 2457899999999999885 36899999 99999985543
No 122
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=6.5e-14 Score=123.44 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=88.9
Q ss_pred HHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC---------CCceEEeCCCCchhhh
Q 037961 24 FKLIASKTP--KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL---------PNIRYQLTPTMSITEL 90 (262)
Q Consensus 24 ~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~ 90 (262)
...++..++ ++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++ .++++..+| +
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D------~ 284 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN------A 284 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECS------T
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEech------h
Confidence 344555553 4478999999999999999998 57999999999999998863 136667765 2
Q ss_pred hhccCCCCceeeEEEccccccC----C--hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 91 EQNVATQSSVDLVTIASALHWF----D--LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 91 ~~~~~~~~~~D~V~~~~~~~~~----d--~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
.+ ++++++||+|+++..+|+. + ..++++++.++|| |||.+++.......+...+.+.+..
T Consensus 285 ~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~iv~n~~~~~~~~l~~~fg~ 350 (375)
T 4dcm_A 285 LS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK-INGELYIVANRHLDYFHKLKKIFGN 350 (375)
T ss_dssp TT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEE-EEEEEEEEEETTSCHHHHHHHHHSC
T ss_pred hc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCC-CCcEEEEEEECCcCHHHHHHHhcCC
Confidence 22 3467899999999999853 2 2258999999999 9999999766655444445555443
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=7.1e-14 Score=110.79 Aligned_cols=109 Identities=22% Similarity=0.263 Sum_probs=87.0
Q ss_pred hHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhh
Q 037961 20 PKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITEL 90 (262)
Q Consensus 20 p~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~ 90 (262)
++.+...+.... .++.+|||+|||+|..+..+++.+.+|+++|+|+.+++.+++. .++.+..++ +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d------~ 91 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD------A 91 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC------H
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecC------H
Confidence 466666666543 5778999999999999999999889999999999999998752 467777765 3
Q ss_pred hhccCCC-CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 91 EQNVATQ-SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 91 ~~~~~~~-~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.. +++. ++||+|++...++ +...+++++.++|+ |||.+++....
T Consensus 92 ~~-~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~l~-~gG~l~~~~~~ 136 (192)
T 1l3i_A 92 PE-ALCKIPDIDIAVVGGSGG--ELQEILRIIKDKLK-PGGRIIVTAIL 136 (192)
T ss_dssp HH-HHTTSCCEEEEEESCCTT--CHHHHHHHHHHTEE-EEEEEEEEECB
T ss_pred HH-hcccCCCCCEEEECCchH--HHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 33 1222 5899999987765 45889999999999 99999986554
No 124
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.52 E-value=7.5e-14 Score=114.82 Aligned_cols=102 Identities=20% Similarity=0.215 Sum_probs=79.1
Q ss_pred HHHHHHH---HhhC--CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhc----CCCceEEeCCCCchhh
Q 037961 21 KELFKLI---ASKT--PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIK----LPNIRYQLTPTMSITE 89 (262)
Q Consensus 21 ~~~~~~l---~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~ 89 (262)
.++...+ +... .++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.+++ ..++.++.++
T Consensus 57 ~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d------ 130 (230)
T 1fbn_A 57 SKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGD------ 130 (230)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC------
T ss_pred hHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECC------
Confidence 3444555 3333 467899999999999999999874 799999999999988764 3578887776
Q ss_pred hhh----ccCCCCceeeEEEccccccC-Ch---hHHHHHHHHhhcCCCeEEEEE
Q 037961 90 LEQ----NVATQSSVDLVTIASALHWF-DL---PQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 90 ~~~----~~~~~~~~D~V~~~~~~~~~-d~---~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.. .++. ++||+|+ |++ ++ ..+++++.++|| |||.+++.
T Consensus 131 ~~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~ 177 (230)
T 1fbn_A 131 ANKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLK-KGGYGMIA 177 (230)
T ss_dssp TTCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCC-CCcEEEEE
Confidence 222 4444 7899999 444 56 668999999999 99999984
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.51 E-value=2.3e-14 Score=117.69 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=72.2
Q ss_pred CCCCCeEEEEcCcccHhHHHHHh--hCCeEEEEcCC-HHHHHHH---hcC------CCceEEeCCCCchhhhhhccCC-C
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQ--IYQHVIATDTS-PKQLKFA---IKL------PNIRYQLTPTMSITELEQNVAT-Q 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~--~~~~v~~vD~s-~~~~~~a---~~~------~~~~~~~~~~~~~~~~~~~~~~-~ 97 (262)
..++.+|||||||+|.++..+++ .+.+|+|+|+| +.|++.| ++. +++.+..++ +++++.. .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d------~~~l~~~~~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAA------AESLPFELK 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCB------TTBCCGGGT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcC------HHHhhhhcc
Confidence 35778999999999999999984 46789999999 7787776 532 567787765 4444311 2
Q ss_pred CceeeEEEcccc-----ccC-ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 98 SSVDLVTIASAL-----HWF-DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 98 ~~~D~V~~~~~~-----~~~-d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
..+|.|.++..+ |+. +...++++++|+|| |||.|++.
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~i~ 138 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAK-KEAHFEFV 138 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEE-EEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcC-CCcEEEEE
Confidence 456666665533 222 55679999999999 99999983
No 126
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.51 E-value=4.7e-14 Score=123.33 Aligned_cols=95 Identities=21% Similarity=0.220 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
.++.+|||+|||+|.++..+++.+. +|+|+|+| +|++.|++. .+++++.++ ++++++++++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGK------VEEVELPVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESC------TTTCCCSSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECc------HHHccCCCCceEEE
Confidence 4678999999999999999999865 99999999 599988752 237888765 66667778899999
Q ss_pred EEccc---cccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 104 TIASA---LHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~---~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++... +++. +.+.++.++.++|| |||.++.
T Consensus 138 is~~~~~~l~~~~~~~~~l~~~~r~Lk-pgG~li~ 171 (349)
T 3q7e_A 138 ISEWMGYCLFYESMLNTVLHARDKWLA-PDGLIFP 171 (349)
T ss_dssp EECCCBBTBTBTCCHHHHHHHHHHHEE-EEEEEES
T ss_pred EEccccccccCchhHHHHHHHHHHhCC-CCCEEcc
Confidence 99765 3444 77789999999999 9999874
No 127
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=1.7e-13 Score=114.21 Aligned_cols=111 Identities=23% Similarity=0.317 Sum_probs=87.7
Q ss_pred CCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCC
Q 037961 16 RPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTP 83 (262)
Q Consensus 16 rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (262)
.+.||... ..+.... .++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++. .++.+..+|
T Consensus 78 ~~~~~~~~-~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d 156 (258)
T 2pwy_A 78 TPTYPKDA-SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK 156 (258)
T ss_dssp CCCCHHHH-HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC
T ss_pred ccccchHH-HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 45666554 3444333 57789999999999999999987 67999999999999998753 467777765
Q ss_pred CCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 84 TMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 84 ~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+.++++++||+|++. +-++..+++++.++|+ |||.+++....
T Consensus 157 ------~~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 200 (258)
T 2pwy_A 157 ------LEEAELEEAAYDGVALD----LMEPWKVLEKAALALK-PDRFLVAYLPN 200 (258)
T ss_dssp ------GGGCCCCTTCEEEEEEE----SSCGGGGHHHHHHHEE-EEEEEEEEESC
T ss_pred ------hhhcCCCCCCcCEEEEC----CcCHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 55555677899999983 3478899999999999 99999997644
No 128
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.51 E-value=1e-13 Score=118.22 Aligned_cols=112 Identities=13% Similarity=0.196 Sum_probs=80.0
Q ss_pred ChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----------CCceEEeCCCC
Q 037961 19 YPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----------PNIRYQLTPTM 85 (262)
Q Consensus 19 yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (262)
|.+.+....+...++..+|||||||+|..++.++++ ..+|+++|+|+.+++.|+++ +++++..+|..
T Consensus 69 Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 69 YHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 334333333334467789999999999999999986 46899999999999999752 46788877621
Q ss_pred chhhhhhccCCCCceeeEEEccccccCC-----hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 86 SITELEQNVATQSSVDLVTIASALHWFD-----LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 86 ~~~~~~~~~~~~~~~D~V~~~~~~~~~d-----~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+...+++||+|++...-++.. ...+++++.++|+ |||+|++..
T Consensus 149 -----~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lk-pgG~lv~~~ 198 (294)
T 3adn_A 149 -----NFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp -----C---CCCCCEEEEEECC----------CCHHHHHHHHHTEE-EEEEEEEEE
T ss_pred -----HHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcC-CCCEEEEec
Confidence 11222467899999976655442 2679999999999 999999965
No 129
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.51 E-value=5.9e-14 Score=117.57 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=77.6
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc--CCCCceee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV--ATQSSVDL 102 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~D~ 102 (262)
++.+|||+|||+|.++..++.++. +|+|+|+++.+++.|+++ .++++..+| +.+.+ +++++||+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D------~~~~~~~~~~~~fD~ 122 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD------LKKITDLIPKERADI 122 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC------GGGGGGTSCTTCEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc------HHHhhhhhccCCccE
Confidence 678999999999999999999865 999999999999999863 257888776 33332 45789999
Q ss_pred EEEccccccC---------------------ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 103 VTIASALHWF---------------------DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 103 V~~~~~~~~~---------------------d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+++..++.. +...+++.+.++|| |||++++..
T Consensus 123 Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 176 (259)
T 3lpm_A 123 VTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVH 176 (259)
T ss_dssp EEECCCC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEE
Confidence 9998665432 23569999999999 999999844
No 130
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.50 E-value=9.2e-14 Score=122.64 Aligned_cols=103 Identities=22% Similarity=0.186 Sum_probs=82.5
Q ss_pred HHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh
Q 037961 23 LFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 23 ~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 92 (262)
+.+.|.... .++.+|||||||+|.++..+++.++ +|+|+|+| .|++.|++. .+++++.++ +++
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d------~~~ 123 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGS------VED 123 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESC------GGG
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECc------hhh
Confidence 344454433 4778999999999999999999877 99999999 999988753 347888765 666
Q ss_pred ccCCCCceeeEEEccccccC----ChhHHHHHHHHhhcCCCeEEEE
Q 037961 93 NVATQSSVDLVTIASALHWF----DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~----d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++++ ++||+|++....|++ +...+++++.++|| |||.|++
T Consensus 124 ~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~ 167 (376)
T 3r0q_C 124 ISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLK-PTGVMYP 167 (376)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEE-EEEEEES
T ss_pred cCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCC-CCeEEEE
Confidence 6655 889999997766655 36669999999999 9999986
No 131
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=9.6e-14 Score=116.05 Aligned_cols=107 Identities=19% Similarity=0.140 Sum_probs=84.6
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---CC--ceEEeCCCCchhhhhhccCC
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL---PN--IRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~--~~~~~~~~~~~~~~~~~~~~ 96 (262)
...+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++ .+ +.+..++ +... ++
T Consensus 109 ~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d------~~~~-~~ 181 (254)
T 2nxc_A 109 LALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGS------LEAA-LP 181 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESC------HHHH-GG
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECC------hhhc-Cc
Confidence 34556666667888999999999999999999888999999999999998863 12 6777665 3221 34
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+++||+|+++...++ ...+++++.++|| |||.+++....
T Consensus 182 ~~~fD~Vv~n~~~~~--~~~~l~~~~~~Lk-pgG~lils~~~ 220 (254)
T 2nxc_A 182 FGPFDLLVANLYAEL--HAALAPRYREALV-PGGRALLTGIL 220 (254)
T ss_dssp GCCEEEEEEECCHHH--HHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred CCCCCEEEECCcHHH--HHHHHHHHHHHcC-CCCEEEEEeec
Confidence 678999999876654 4679999999999 99999985543
No 132
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.9e-13 Score=107.57 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=87.0
Q ss_pred CChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhh
Q 037961 18 NYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITE 89 (262)
Q Consensus 18 ~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~ 89 (262)
..++.+.+.+.... .++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++ +++.+..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d------ 91 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGR------ 91 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESC------
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECC------
Confidence 34466666666654 4678999999999999999999888999999999999998863 567888765
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+.+ ++++++||+|+++.+ -+...+++++.++ |||.+++.....
T Consensus 92 ~~~-~~~~~~~D~i~~~~~---~~~~~~l~~~~~~---~gG~l~~~~~~~ 134 (183)
T 2yxd_A 92 AED-VLDKLEFNKAFIGGT---KNIEKIIEILDKK---KINHIVANTIVL 134 (183)
T ss_dssp HHH-HGGGCCCSEEEECSC---SCHHHHHHHHHHT---TCCEEEEEESCH
T ss_pred ccc-cccCCCCcEEEECCc---ccHHHHHHHHhhC---CCCEEEEEeccc
Confidence 333 345578999999888 6778899999999 599999866443
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=9.9e-14 Score=119.66 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=82.5
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCe---EEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhh
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQH---VIATDTSPKQLKFAIKL------PNIRYQLTPTMSITEL 90 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~ 90 (262)
.+...+...+ .++.+|||+|||+|.++..+++.+.+ |+|+|+|+.+++.|+++ .++.+..+| +
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d------~ 135 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD------G 135 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------G
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC------h
Confidence 4555665554 47789999999999999999987654 99999999999998753 467888765 4
Q ss_pred hhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 91 EQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 91 ~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+.+.++++||+|++..+++++. +++.++|| |||++++..
T Consensus 136 ~~~~~~~~~fD~Iv~~~~~~~~~-----~~~~~~Lk-pgG~lvi~~ 175 (317)
T 1dl5_A 136 YYGVPEFSPYDVIFVTVGVDEVP-----ETWFTQLK-EGGRVIVPI 175 (317)
T ss_dssp GGCCGGGCCEEEEEECSBBSCCC-----HHHHHHEE-EEEEEEEEB
T ss_pred hhccccCCCeEEEEEcCCHHHHH-----HHHHHhcC-CCcEEEEEE
Confidence 44333457899999999999886 57889999 999999854
No 134
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.49 E-value=1.4e-13 Score=121.17 Aligned_cols=105 Identities=18% Similarity=0.136 Sum_probs=83.8
Q ss_pred HHHHHHhhC---CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCC
Q 037961 23 LFKLIASKT---PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQ 97 (262)
Q Consensus 23 ~~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (262)
....+.... ++..+|||||||+|.++..+++. ..+++++|+ +.+++.+++.++++++.+| +.+ +++.
T Consensus 190 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d------~~~-~~p~ 261 (368)
T 3reo_A 190 TMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGD------MFD-GVPK 261 (368)
T ss_dssp HHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECC------TTT-CCCC
T ss_pred HHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecC------CCC-CCCC
Confidence 344455443 35689999999999999999986 458999999 9999999888899999876 333 3454
Q ss_pred CceeeEEEccccccC-Chh--HHHHHHHHhhcCCCeEEEEEecC
Q 037961 98 SSVDLVTIASALHWF-DLP--QFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+ |+|++..++|++ |.+ +++++++++|| |||+|++....
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 302 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALP-DHGKVIVAEYI 302 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSC-TTCEEEEEECC
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 4 999999999977 433 68999999999 99999986543
No 135
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.6e-13 Score=111.29 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=81.9
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC---CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY---QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITE 89 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~ 89 (262)
+.+...+.... .++.+|||+|||+|..+..+++.+ .+|+++|+|+.+++.+++. .++.+..++
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------ 136 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD------ 136 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC------
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC------
Confidence 44455555443 467899999999999999999875 7999999999999998753 567887765
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+......+++||+|++..++|++. .++.++|| |||++++...
T Consensus 137 ~~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~-pgG~lv~~~~ 178 (215)
T 2yxe_A 137 GTLGYEPLAPYDRIYTTAAGPKIP-----EPLIRQLK-DGGKLLMPVG 178 (215)
T ss_dssp GGGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEE-EEEEEEEEES
T ss_pred cccCCCCCCCeeEEEECCchHHHH-----HHHHHHcC-CCcEEEEEEC
Confidence 222111257899999999999885 48899999 9999998543
No 136
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.49 E-value=8.6e-14 Score=122.63 Aligned_cols=94 Identities=21% Similarity=0.216 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++..+|||||||+|..+..+++.+ .+++++|+ +.|++.+++.+++++..+| +.+ +++. ||+|++..++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d------~~~-~~~~--~D~v~~~~~l 277 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGD------MFA-SVPQ--GDAMILKAVC 277 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECC------TTT-CCCC--EEEEEEESSG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCC------ccc-CCCC--CCEEEEeccc
Confidence 456899999999999999999875 46888899 9999999888889998876 333 3343 9999999999
Q ss_pred ccC-Chh--HHHHHHHHhhcCCCeEEEEEe
Q 037961 110 HWF-DLP--QFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 110 ~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|++ |.+ +++++++++|| |||+|++..
T Consensus 278 h~~~d~~~~~~l~~~~~~L~-pgG~l~i~e 306 (372)
T 1fp1_D 278 HNWSDEKCIEFLSNCHKALS-PNGKVIIVE 306 (372)
T ss_dssp GGSCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 988 666 89999999999 999999854
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=1.3e-13 Score=116.80 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=83.5
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------C-CceEEeCCCCchhhhhhccC
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------P-NIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~~~~~~~ 95 (262)
...+....+++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++ . ++++..+| +.+++.
T Consensus 116 ~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D------~~~~~~ 189 (278)
T 2frn_A 116 RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD------NRDFPG 189 (278)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------TTTCCC
T ss_pred HHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECC------HHHhcc
Confidence 445556667789999999999999999999887 599999999999998853 2 36777765 444443
Q ss_pred CCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 96 TQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 96 ~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+++||+|+++.. .+...++.++.++|| |||.|++..+.
T Consensus 190 -~~~fD~Vi~~~p---~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 227 (278)
T 2frn_A 190 -ENIADRILMGYV---VRTHEFIPKALSIAK-DGAIIHYHNTV 227 (278)
T ss_dssp -CSCEEEEEECCC---SSGGGGHHHHHHHEE-EEEEEEEEEEE
T ss_pred -cCCccEEEECCc---hhHHHHHHHHHHHCC-CCeEEEEEEee
Confidence 678999998654 355789999999999 99999986654
No 138
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=3.6e-13 Score=112.22 Aligned_cols=110 Identities=21% Similarity=0.260 Sum_probs=86.6
Q ss_pred CCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC------CC-ceEEeCC
Q 037961 16 RPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL------PN-IRYQLTP 83 (262)
Q Consensus 16 rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~-~~~~~~~ 83 (262)
.+.||.... .+.... .++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++ ++ +++..+|
T Consensus 75 ~~~~~~~~~-~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d 153 (255)
T 3mb5_A 75 QIVHPKDAA-LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD 153 (255)
T ss_dssp CCCCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC
T ss_pred ccccHhHHH-HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 345766654 444443 57789999999999999999987 67999999999999999863 34 7888765
Q ss_pred CCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 84 TMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 84 ~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+. +++++||+|+++ .-++..+++++.++|+ |||.++++...
T Consensus 154 ------~~~~-~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 196 (255)
T 3mb5_A 154 ------IYEG-IEEENVDHVILD----LPQPERVVEHAAKALK-PGGFFVAYTPC 196 (255)
T ss_dssp ------GGGC-CCCCSEEEEEEC----SSCGGGGHHHHHHHEE-EEEEEEEEESS
T ss_pred ------hhhc-cCCCCcCEEEEC----CCCHHHHHHHHHHHcC-CCCEEEEEECC
Confidence 3322 567889999984 3377889999999999 99999987644
No 139
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.48 E-value=2.5e-13 Score=119.60 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=83.3
Q ss_pred HHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc-------CCCceEEeCCCCchhhhhh
Q 037961 24 FKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK-------LPNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 24 ~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~-------~~~~~~~~~~~~~~~~~~~ 92 (262)
...+.... ++..+|||||||+|.++..+++. ..+++++|+ +.+++.|++ ..++++..+| +.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d------~~- 262 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGD------FF- 262 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC------TT-
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccC------CC-
Confidence 44455543 46689999999999999999987 458999999 999999885 2568888876 22
Q ss_pred ccCCCCceeeEEEccccccC-Chh--HHHHHHHHhhcCCCeEEEEEec
Q 037961 93 NVATQSSVDLVTIASALHWF-DLP--QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+++. +||+|++..++|++ |.. ++++++.++|+ |||+|++...
T Consensus 263 ~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~ 308 (369)
T 3gwz_A 263 ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMK-PDSRLLVIDN 308 (369)
T ss_dssp TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEE
T ss_pred CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcC-CCCEEEEEEe
Confidence 23344 79999999999988 443 59999999999 9999998554
No 140
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.48 E-value=2.3e-13 Score=117.82 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 102 (262)
++..+|||+|||+|..+..+++. +.+++++|++ .+++.+++. .++++..+| +.+.+++.+ ||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~-~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGS------AFEVDYGND-YDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESC------TTTSCCCSC-EEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecc------cccCCCCCC-CcE
Confidence 56689999999999999999987 5799999999 999998853 358888775 333344444 999
Q ss_pred EEEccccccCC-h--hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASALHWFD-L--PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~~~~~d-~--~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++..++|+++ . .++++++.++|+ |||.+++....
T Consensus 236 v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 273 (335)
T 2r3s_A 236 VLLPNFLHHFDVATCEQLLRKIKTALA-VEGKVIVFDFI 273 (335)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred EEEcchhccCCHHHHHHHHHHHHHhCC-CCcEEEEEeec
Confidence 99999999883 3 479999999999 99999986554
No 141
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.48 E-value=1.7e-13 Score=111.97 Aligned_cols=98 Identities=11% Similarity=0.169 Sum_probs=77.8
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-cc-C----C
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ-NV-A----T 96 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~-~~-~----~ 96 (262)
++.+|||+|||+|..+..+++. +.+|+++|+++.|++.|+++ .+++++.++ +.+ ++ + .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~l~~~~~~~~ 131 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGA------SQDLIPQLKKKYD 131 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC------HHHHGGGTTTTSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECC------HHHHHHHHHHhcC
Confidence 5678999999999999999984 67999999999999999862 358888876 211 22 1 1
Q ss_pred CCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 97 QSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.++||+|++....++. +...++..+ ++|| |||+|++-+..
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lk-pgG~lv~~~~~ 172 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLR-KGTVLLADNVI 172 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHT-TCCC-TTCEEEESCCC
T ss_pred CCceEEEEEcCCcccchHHHHHHHhc-cccC-CCeEEEEeCCC
Confidence 2689999999877777 666778888 9999 99999984443
No 142
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.48 E-value=3.6e-13 Score=113.77 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=86.8
Q ss_pred CCCChHHHHHHHHhh--CCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC---------CCceEEe
Q 037961 16 RPNYPKELFKLIASK--TPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL---------PNIRYQL 81 (262)
Q Consensus 16 rp~yp~~~~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~---------~~~~~~~ 81 (262)
.+.||.... .+... ..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++ .++.+..
T Consensus 81 ~~~~~~~~~-~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~ 159 (280)
T 1i9g_A 81 QVIYPKDAA-QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV 159 (280)
T ss_dssp CCCCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC
T ss_pred eeecHHHHH-HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 345665543 34333 357789999999999999999985 67999999999999988752 3577776
Q ss_pred CCCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 82 TPTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
+| +.+.++++++||+|+++ ..++..+++++.++|+ |||.++++....
T Consensus 160 ~d------~~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 206 (280)
T 1i9g_A 160 SD------LADSELPDGSVDRAVLD----MLAPWEVLDAVSRLLV-AGGVLMVYVATV 206 (280)
T ss_dssp SC------GGGCCCCTTCEEEEEEE----SSCGGGGHHHHHHHEE-EEEEEEEEESSH
T ss_pred Cc------hHhcCCCCCceeEEEEC----CcCHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 54 55555667889999983 2377799999999999 999999976543
No 143
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=1.2e-13 Score=119.70 Aligned_cols=96 Identities=15% Similarity=0.081 Sum_probs=79.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .++++..+| +. .+++. +||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~-~~~p~-~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGS------FF-DPLPA-GAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC------TT-SCCCC-SCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCC------CC-CCCCC-CCcEE
Confidence 4579999999999999999885 458999999 9999998852 568888876 32 22344 79999
Q ss_pred EEccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 104 TIASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 104 ~~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++.+++|++ |. .+++++++++|+ |||+|++....
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 276 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAG-SGGVVLVIEAV 276 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHT-TTCEEEEEECC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcC-CCCEEEEEeec
Confidence 999999988 43 679999999999 99999986543
No 144
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.48 E-value=2.1e-13 Score=112.33 Aligned_cols=111 Identities=16% Similarity=0.189 Sum_probs=84.2
Q ss_pred hCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHh--hCCeEEEEcCCHHHHHHHhcC-------CCceEEeCC
Q 037961 15 ARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQ--IYQHVIATDTSPKQLKFAIKL-------PNIRYQLTP 83 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~--~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (262)
..|...+.....+.... .++.+|||+|||+|..+..++. .+.+|+++|+++.+++.|+++ .++++..++
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 34545455555444433 3678899999999999999998 468999999999999999852 378888876
Q ss_pred CCchhhhhh-cc-CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 84 TMSITELEQ-NV-ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 84 ~~~~~~~~~-~~-~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+.+ ++ ..+++||+|++... .-+...+++++.++|| |||+|++
T Consensus 131 ------~~~~~~~~~~~~fD~V~~~~~--~~~~~~~l~~~~~~Lk-pgG~lv~ 174 (232)
T 3ntv_A 131 ------ALEQFENVNDKVYDMIFIDAA--KAQSKKFFEIYTPLLK-HQGLVIT 174 (232)
T ss_dssp ------GGGCHHHHTTSCEEEEEEETT--SSSHHHHHHHHGGGEE-EEEEEEE
T ss_pred ------HHHHHHhhccCCccEEEEcCc--HHHHHHHHHHHHHhcC-CCeEEEE
Confidence 222 22 22678999997643 2267789999999999 9999988
No 145
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.48 E-value=4.5e-14 Score=131.02 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=82.6
Q ss_pred HHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhc--cCCCC
Q 037961 27 IASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQN--VATQS 98 (262)
Q Consensus 27 l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~--~~~~~ 98 (262)
+....+.+.+|||||||+|.++..|++.|++|+|||+|+.+++.|+.+ .+++|.+++ ++++ ..+++
T Consensus 60 ~~~~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~------~~~~~~~~~~~ 133 (569)
T 4azs_A 60 LSRALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGR------IEEVIAALEEG 133 (569)
T ss_dssp HHHHHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECC------HHHHHHHCCTT
T ss_pred HHhhcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECC------HHHHhhhccCC
Confidence 333345667899999999999999999999999999999999998742 357888765 5554 34678
Q ss_pred ceeeEEEccccccC-ChhH--HHHHHHHhhcCCCeEEEEEec
Q 037961 99 SVDLVTIASALHWF-DLPQ--FYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 99 ~~D~V~~~~~~~~~-d~~~--~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+||+|+|..++||+ |+.. .+..+.+.|+ ++|...+...
T Consensus 134 ~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~-~~~~~~~~~~ 174 (569)
T 4azs_A 134 EFDLAIGLSVFHHIVHLHGIDEVKRLLSRLA-DVTQAVILEL 174 (569)
T ss_dssp SCSEEEEESCHHHHHHHHCHHHHHHHHHHHH-HHSSEEEEEC
T ss_pred CccEEEECcchhcCCCHHHHHHHHHHHHHhc-cccceeeEEe
Confidence 99999999999999 7664 3556778888 8887766443
No 146
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.48 E-value=1.7e-13 Score=109.71 Aligned_cols=118 Identities=14% Similarity=0.175 Sum_probs=81.4
Q ss_pred CCCChHHHHHHHHhh--CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC--CCchhh-h
Q 037961 16 RPNYPKELFKLIASK--TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP--TMSITE-L 90 (262)
Q Consensus 16 rp~yp~~~~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~--~~~~~~-~ 90 (262)
|.+-.-++.+.+... .+++.+|||+|||+|.++..+++.+.+|+|+|+++.. ..+++.++++| .....+ +
T Consensus 6 r~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----~~~~v~~~~~D~~~~~~~~~~ 80 (191)
T 3dou_A 6 RSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----EIAGVRFIRCDIFKETIFDDI 80 (191)
T ss_dssp TSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----CCTTCEEEECCTTSSSHHHHH
T ss_pred CCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----cCCCeEEEEccccCHHHHHHH
Confidence 333334555555544 3678999999999999999999998999999999752 34689999888 211100 0
Q ss_pred hhccCC---CCceeeEEEccccccC-----C-------hhHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 91 EQNVAT---QSSVDLVTIASALHWF-----D-------LPQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 91 ~~~~~~---~~~~D~V~~~~~~~~~-----d-------~~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
... +. .++||+|++..+..+. | ...+++.+.++|| |||+|++-.+...
T Consensus 81 ~~~-~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk-pGG~lv~k~~~~~ 143 (191)
T 3dou_A 81 DRA-LREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLR-NGGNVLLKQFQGD 143 (191)
T ss_dssp HHH-HHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECST
T ss_pred HHH-hhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEcCCC
Confidence 000 11 1489999997654322 2 2457889999999 9999998555443
No 147
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.47 E-value=8.2e-14 Score=121.49 Aligned_cols=120 Identities=12% Similarity=0.117 Sum_probs=89.0
Q ss_pred HHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhc
Q 037961 23 LFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 23 ~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~ 93 (262)
..+.+...+ .+..+|||+|||+|.++..+++.+ .+|+++|+|+.|++.++++ ..+.+..++ +...
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d------~~~~ 257 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASN------VFSE 257 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECS------TTTT
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcc------cccc
Confidence 344555554 245689999999999999999876 5899999999999998853 235566554 2222
Q ss_pred cCCCCceeeEEEcccccc-----C-ChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhc
Q 037961 94 VATQSSVDLVTIASALHW-----F-DLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFK 151 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~-----~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~ 151 (262)
.+++||+|+++..+|+ . +...+++++.++|| |||.+++.......+...+.+.+.
T Consensus 258 --~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 258 --VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLN-SGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp --CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEE-EEEEEEEEEETTSSHHHHHHHHHS
T ss_pred --ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCC-CCcEEEEEEcCCCCcHHHHHHhcC
Confidence 3678999999999996 2 46779999999999 999999966554443344444443
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=2.1e-13 Score=113.46 Aligned_cols=108 Identities=23% Similarity=0.277 Sum_probs=80.5
Q ss_pred HHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh----CCeEEEEcCCHHHHHHHhcC---C---C-------------
Q 037961 22 ELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI----YQHVIATDTSPKQLKFAIKL---P---N------------- 76 (262)
Q Consensus 22 ~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~---~---~------------- 76 (262)
++++.+....+ +..+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++ . +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 35555555443 5678999999999999999876 56899999999999999842 2 1
Q ss_pred ----------------ce-------------EEeCCCCchhhhhhccC-----CCCceeeEEEccccccC-C--------
Q 037961 77 ----------------IR-------------YQLTPTMSITELEQNVA-----TQSSVDLVTIASALHWF-D-------- 113 (262)
Q Consensus 77 ----------------~~-------------~~~~~~~~~~~~~~~~~-----~~~~~D~V~~~~~~~~~-d-------- 113 (262)
++ +..+| +.+... ...+||+|+++..++.. +
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D------~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~ 191 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTAD------VFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQ 191 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECC------TTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecc------cccccccccccCCCCceEEEeCCCeecccccccccccc
Confidence 45 77665 222110 33489999999877765 3
Q ss_pred -hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 114 -LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 114 -~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
...+++++.++|+ |||.|++..
T Consensus 192 ~~~~~l~~~~~~Lk-pgG~l~~~~ 214 (250)
T 1o9g_A 192 PVAGLLRSLASALP-AHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHHHHSC-TTCEEEEEE
T ss_pred HHHHHHHHHHHhcC-CCcEEEEeC
Confidence 2379999999999 999999843
No 149
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.47 E-value=1.6e-13 Score=119.98 Aligned_cols=95 Identities=19% Similarity=0.197 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++..+|||||||+|..+..+++. +.+++++|+ +.|++.+++.+++++..+| +.+ +++ .||+|++..++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d------~~~-~~p--~~D~v~~~~~l 256 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGD------MFT-SIP--NADAVLLKYIL 256 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECC------TTT-CCC--CCSEEEEESCG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEecc------ccC-CCC--CccEEEeehhh
Confidence 46689999999999999999986 468999999 9999999887788988876 322 233 39999999999
Q ss_pred ccC-Chh--HHHHHHHHhhcCC---CeEEEEEec
Q 037961 110 HWF-DLP--QFYKQVKWVLKKP---SGVIAAWTY 137 (262)
Q Consensus 110 ~~~-d~~--~~l~~~~r~Lk~p---gG~l~i~~~ 137 (262)
|++ |.+ +++++++++|| | ||+|++...
T Consensus 257 h~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 257 HNWTDKDCLRILKKCKEAVT-NDGKRGKVTIIDM 289 (352)
T ss_dssp GGSCHHHHHHHHHHHHHHHS-GGGCCCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 977 666 89999999999 9 999998544
No 150
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.47 E-value=1.6e-13 Score=114.46 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=78.0
Q ss_pred CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccC---CCCcee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVA---TQSSVD 101 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~D 101 (262)
++.+|||||||+|..+..++.. ..+|+++|+|+.+++.++++ .+++++.++ +++++. .+++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d------~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGR------AEVLAREAGHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECC------HHHHTTSTTTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECc------HHHhhcccccCCCce
Confidence 5689999999999999999876 57999999999999998852 468888765 555543 247899
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+|++... .+...+++.+.++|| |||.++++..
T Consensus 154 ~I~s~a~---~~~~~ll~~~~~~Lk-pgG~l~~~~g 185 (249)
T 3g89_A 154 RAVARAV---APLCVLSELLLPFLE-VGGAAVAMKG 185 (249)
T ss_dssp EEEEESS---CCHHHHHHHHGGGEE-EEEEEEEEEC
T ss_pred EEEECCc---CCHHHHHHHHHHHcC-CCeEEEEEeC
Confidence 9998642 367889999999999 9999998653
No 151
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.47 E-value=5.9e-14 Score=118.63 Aligned_cols=95 Identities=9% Similarity=-0.047 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--C------CceEE--eCCCCchhhhhhccCCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--P------NIRYQ--LTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~------~~~~~--~~~~~~~~~~~~~~~~~~~~D 101 (262)
+++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+++. . ++.++ ++ |+..+ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~------D~~~l--~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKV------DVTKM--EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSC------CGGGC--CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccC------cHhhC--CCCCcC
Confidence 57789999999999999999998 8999999998 75444332 2 56666 54 45554 467899
Q ss_pred eEEEccccccC-C----hh---HHHHHHHHhhcCCCe--EEEEEecC
Q 037961 102 LVTIASALHWF-D----LP---QFYKQVKWVLKKPSG--VIAAWTYT 138 (262)
Q Consensus 102 ~V~~~~~~~~~-d----~~---~~l~~~~r~Lk~pgG--~l~i~~~~ 138 (262)
+|+|..+ ++. + .. .+++++.++|| ||| .|++-.+.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLE-YNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeCC
Confidence 9999877 443 2 22 37899999999 999 98884444
No 152
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=2.7e-13 Score=114.55 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=84.5
Q ss_pred hHHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhh
Q 037961 20 PKELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITEL 90 (262)
Q Consensus 20 p~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~ 90 (262)
.+.+++.+.... .++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++ .++.+..+| +
T Consensus 95 te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d------~ 168 (276)
T 2b3t_A 95 TECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD------W 168 (276)
T ss_dssp HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS------T
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc------h
Confidence 356677777766 46678999999999999999975 67999999999999998853 468888776 2
Q ss_pred hhccCCCCceeeEEEccccccC--------------------------ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 91 EQNVATQSSVDLVTIASALHWF--------------------------DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 91 ~~~~~~~~~~D~V~~~~~~~~~--------------------------d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
... +++++||+|+++..+++. +...+++++.++|+ |||.+++.
T Consensus 169 ~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~ 237 (276)
T 2b3t_A 169 FSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGGFLLLE 237 (276)
T ss_dssp TGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEE
T ss_pred hhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 221 246789999998666543 23568899999999 99999984
No 153
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=110.00 Aligned_cols=104 Identities=14% Similarity=0.072 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh-C----------CeEEEEcCCHHHHHHHhcCCCceEE-eCCCCchhhhh--hccCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI-Y----------QHVIATDTSPKQLKFAIKLPNIRYQ-LTPTMSITELE--QNVAT 96 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~--~~~~~ 96 (262)
++++.+|||+|||+|.++..+++. + .+|+|+|+|+.+ ..+++.+. .++........ ...++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 467889999999999999999987 3 789999999842 23567777 66611110000 01134
Q ss_pred CCceeeEEEcccccc----C-Ch-------hHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 97 QSSVDLVTIASALHW----F-DL-------PQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~----~-d~-------~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
+++||+|++..++++ . |. ..+++++.++|| |||+|++..+...
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~ 149 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQ-PGGTFLCKTWAGS 149 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCSG
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCCc
Confidence 568999999766554 3 44 478999999999 9999998655443
No 154
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.47 E-value=3.2e-13 Score=117.08 Aligned_cols=116 Identities=14% Similarity=0.102 Sum_probs=89.0
Q ss_pred HHHHhhCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCce
Q 037961 10 NLYAVARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIR 78 (262)
Q Consensus 10 ~~Y~~~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~ 78 (262)
..|.+.. .+.......+.... ++ .+|||+|||+|..+..+++. ..+++++|+ +.+++.+++. .+++
T Consensus 144 ~~f~~~m-~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~ 220 (334)
T 2ip2_A 144 RRFLLAM-KASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVS 220 (334)
T ss_dssp HHHHHHH-GGGHHHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEE
T ss_pred HHHHHHH-HHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEE
Confidence 3444444 44445555555543 34 89999999999999999986 568999999 9999998753 4688
Q ss_pred EEeCCCCchhhhhhccCCCCceeeEEEccccccC-Chh--HHHHHHHHhhcCCCeEEEEEec
Q 037961 79 YQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLP--QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+..+| +.+ +++ ++||+|++..++|++ +.. ++++++.++|+ |||+|++...
T Consensus 221 ~~~~d------~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 273 (334)
T 2ip2_A 221 LVGGD------MLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMA-GDGRVVVIER 273 (334)
T ss_dssp EEESC------TTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSC-TTCEEEEEEC
T ss_pred EecCC------CCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEe
Confidence 88876 322 234 579999999999866 554 79999999999 9999998654
No 155
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.47 E-value=6.9e-14 Score=115.37 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=66.0
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-CCceEEeCCCC---chhhhhhccCCCCceeeEEEcc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-PNIRYQLTPTM---SITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
++.+|||+|||||.++..+++.++ +|+|+|+|+.|++.+++. +++.......+ ..+++....+...+||+++++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~- 115 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS- 115 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC-
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh-
Confidence 467999999999999999999985 999999999999987653 33332222111 112221111122344444432
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
...+++++.|+|| |||.|++..
T Consensus 116 ------l~~~l~~i~rvLk-pgG~lv~~~ 137 (232)
T 3opn_A 116 ------LDLILPPLYEILE-KNGEVAALI 137 (232)
T ss_dssp ------GGGTHHHHHHHSC-TTCEEEEEE
T ss_pred ------HHHHHHHHHHhcc-CCCEEEEEE
Confidence 3889999999999 999999843
No 156
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=1.2e-13 Score=113.14 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=79.4
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-------eEEEEcCCHHHHHHHhcC-----------CCceEEeCCCC
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-------HVIATDTSPKQLKFAIKL-----------PNIRYQLTPTM 85 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-------~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (262)
++.+.....++.+|||+|||+|..+..+++.+. +|+++|+++.+++.|+++ .++.+..+|
T Consensus 71 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d-- 148 (227)
T 2pbf_A 71 LKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN-- 148 (227)
T ss_dssp HHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC--
T ss_pred HHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC--
Confidence 444443456788999999999999999998754 999999999999998753 367888776
Q ss_pred chhhhhhcc----CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 86 SITELEQNV----ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 86 ~~~~~~~~~----~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.... ...++||+|++..+++++ ++++.++|| |||++++..
T Consensus 149 ----~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~Lk-pgG~lv~~~ 193 (227)
T 2pbf_A 149 ----IYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLA-ENGKLIIPI 193 (227)
T ss_dssp ----GGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEE-EEEEEEEEE
T ss_pred ----hHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcC-CCcEEEEEE
Confidence 22221 235689999999998865 478899999 999999844
No 157
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=2.7e-13 Score=111.54 Aligned_cols=113 Identities=16% Similarity=0.169 Sum_probs=85.8
Q ss_pred hCCCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCC
Q 037961 15 ARPNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTP 83 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (262)
..|...+.....+.... .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++. .++.+..++
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 113 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD 113 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 44544555555544433 36678999999999999999987 58999999999999998863 357888776
Q ss_pred CCchhhhhh-ccC--CCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 84 TMSITELEQ-NVA--TQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 84 ~~~~~~~~~-~~~--~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.. ++. .+++||+|++....+ +...+++++.++|+ |||.+++.+
T Consensus 114 ------~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~-pgG~lv~~~ 160 (233)
T 2gpy_A 114 ------ALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVR-PGGLILSDN 160 (233)
T ss_dssp ------GGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEE-EEEEEEEET
T ss_pred ------HHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcC-CCeEEEEEc
Confidence 222 121 257899999877654 77889999999999 999999843
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=1.1e-13 Score=114.58 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=76.8
Q ss_pred CCCeEEEEcCcccHhHHHHHhh------CCeEEEEcCCHHHHHHHhcC-CCceEEeCCCCchhhhhhccC-CCCceeeEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI------YQHVIATDTSPKQLKFAIKL-PNIRYQLTPTMSITELEQNVA-TQSSVDLVT 104 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~D~V~ 104 (262)
++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+.. .+++++.+|... ...++. ...+||+|+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~---~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSD---LTTFEHLREMAHPLIF 157 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSC---SGGGGGGSSSCSSEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchh---HHHHHhhccCCCCEEE
Confidence 4578999999999999999886 67999999999999888753 678999887211 100222 334799999
Q ss_pred EccccccCChhHHHHHHHH-hhcCCCeEEEEEe
Q 037961 105 IASALHWFDLPQFYKQVKW-VLKKPSGVIAAWT 136 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r-~Lk~pgG~l~i~~ 136 (262)
+..+ | .+...++.++.+ +|| |||+|++..
T Consensus 158 ~d~~-~-~~~~~~l~~~~r~~Lk-pGG~lv~~d 187 (236)
T 2bm8_A 158 IDNA-H-ANTFNIMKWAVDHLLE-EGDYFIIED 187 (236)
T ss_dssp EESS-C-SSHHHHHHHHHHHTCC-TTCEEEECS
T ss_pred ECCc-h-HhHHHHHHHHHHhhCC-CCCEEEEEe
Confidence 8665 4 478889999997 999 999999843
No 159
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.46 E-value=3.3e-13 Score=118.57 Aligned_cols=96 Identities=18% Similarity=0.154 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
.+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++.++++++.+| +.+ +++.+ |+|++..++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D------~~~-~~p~~--D~v~~~~vl 269 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGD------MFK-EVPSG--DTILMKWIL 269 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECC------TTT-CCCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCC------cCC-CCCCC--CEEEehHHh
Confidence 36689999999999999999986 458999999 9999999888899999876 333 44544 999999999
Q ss_pred ccC-Ch--hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 110 HWF-DL--PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 110 ~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|+. |. .+++++++++|| |||+|++....
T Consensus 270 h~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~ 300 (364)
T 3p9c_A 270 HDWSDQHCATLLKNCYDALP-AHGKVVLVQCI 300 (364)
T ss_dssp GGSCHHHHHHHHHHHHHHSC-TTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 977 33 468999999999 99999986543
No 160
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.46 E-value=3.3e-13 Score=115.74 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=77.4
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhhccC--C
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQNVA--T 96 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~--~ 96 (262)
.+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+++. +++++..+| +...+. +
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D------~~~~~~~~~ 166 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGD------GLAFVRQTP 166 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC------HHHHHHSSC
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc------HHHHHHhcc
Confidence 356789999999999999999986 46999999999999998752 467787765 333322 4
Q ss_pred CCceeeEEEccccccC-Ch----hHHHHHHHHhhcCCCeEEEEEec
Q 037961 97 QSSVDLVTIASALHWF-DL----PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~-d~----~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+++||+|++....++. +. ..+++++.++|| |||+|++...
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 211 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILK-PDGICCNQGE 211 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEecC
Confidence 6789999998776654 22 579999999999 9999999654
No 161
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.46 E-value=8.6e-14 Score=117.00 Aligned_cols=96 Identities=9% Similarity=-0.058 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--C------CceEE--eCCCCchhhhhhccCCCCce
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--P------NIRYQ--LTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~------~~~~~--~~~~~~~~~~~~~~~~~~~~ 100 (262)
.+++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++. + ++.++ ++| +.++ ++++|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D------~~~l--~~~~f 141 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVD------IHTL--PVERT 141 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCC------TTTS--CCCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccC------HhHC--CCCCC
Confidence 357889999999999999999988 8999999998 65444322 2 56666 544 4444 46789
Q ss_pred eeEEEccccccC-C----hh---HHHHHHHHhhcCCCe--EEEEEecC
Q 037961 101 DLVTIASALHWF-D----LP---QFYKQVKWVLKKPSG--VIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~~~~~~-d----~~---~~l~~~~r~Lk~pgG--~l~i~~~~ 138 (262)
|+|+|..+ ++. + .. .+++++.++|| ||| .|++-.+.
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKV-KNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhc-cCCCeEEEEEeCC
Confidence 99999877 443 3 22 37899999999 999 88884444
No 162
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.45 E-value=4.1e-13 Score=110.44 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=81.4
Q ss_pred HHhhCCCChHHHHHHHHhhC-----CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHH----HHHhcCCCceE
Q 037961 12 YAVARPNYPKELFKLIASKT-----PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQL----KFAIKLPNIRY 79 (262)
Q Consensus 12 Y~~~rp~yp~~~~~~l~~~~-----~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~----~~a~~~~~~~~ 79 (262)
|+.+.| |-..+...++..+ .++.+|||+|||+|..+..+++. ..+|+|+|+|+.|+ +.+++..++.+
T Consensus 51 yr~w~~-~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~ 129 (232)
T 3id6_C 51 YREWNA-FRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFP 129 (232)
T ss_dssp EEECCT-TTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEE
T ss_pred hhhhch-HHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEE
Confidence 444444 3345555555443 47899999999999999999885 34899999999885 44555678999
Q ss_pred EeCCCCchhhhhhccCCCCceeeEEEccccccCChhHH-HHHHHHhhcCCCeEEEEEe
Q 037961 80 QLTPTMSITELEQNVATQSSVDLVTIASALHWFDLPQF-YKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~-l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+|... ........++||+|++..+. .+.... ...+.++|| |||.|++..
T Consensus 130 i~~Da~~---~~~~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~Lk-pGG~lvisi 181 (232)
T 3id6_C 130 LLADARF---PQSYKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLK-VNGDMLLVI 181 (232)
T ss_dssp EECCTTC---GGGTTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEccccc---chhhhccccceEEEEecCCC--hhHHHHHHHHHHHhCC-CCeEEEEEE
Confidence 9887111 11111124689999998664 344444 456666999 999999853
No 163
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=4.1e-13 Score=109.93 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=78.3
Q ss_pred HHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC--------CCceEEeCCCCchhh
Q 037961 23 LFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL--------PNIRYQLTPTMSITE 89 (262)
Q Consensus 23 ~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~ 89 (262)
++..+....+ +..+|||+|||+|..+..++.. +.+|+++|+|+.+++.|+++ .++++..++
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd------ 117 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR------ 117 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC------
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC------
Confidence 3444444433 2348999999999999999885 57999999999999999852 357888765
Q ss_pred hhh-cc-CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 90 LEQ-NV-ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 90 ~~~-~~-~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+.+ ++ +++++||+|++.... -+...+++++.++|| |||+|++
T Consensus 118 a~~~l~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~ 161 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFGQVSP--MDLKALVDAAWPLLR-RGGALVL 161 (221)
T ss_dssp HHHHGGGSCTTCEEEEEECCCT--TTHHHHHHHHHHHEE-EEEEEEE
T ss_pred HHHHHHHhcCCCcCeEEEcCcH--HHHHHHHHHHHHHcC-CCcEEEE
Confidence 322 22 346899999986432 156779999999999 9999998
No 164
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=7.1e-13 Score=112.04 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=79.4
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.+.+.+|||+|||+|.++..++++ ..+|+++|+++.+++.|+++ ++++++.+| +.. ++..+
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D------~~~~l~~~~ 146 (275)
T 1iy9_A 73 HPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD------GFMHIAKSE 146 (275)
T ss_dssp SSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC------SHHHHHTCC
T ss_pred CCCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc------HHHHHhhCC
Confidence 456789999999999999999987 36999999999999998852 467788776 222 22245
Q ss_pred CceeeEEEccccccCC-----hhHHHHHHHHhhcCCCeEEEEEec
Q 037961 98 SSVDLVTIASALHWFD-----LPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d-----~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++||+|++....++.. ...+++++.++|+ |||++++...
T Consensus 147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~-pgG~lv~~~~ 190 (275)
T 1iy9_A 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALK-EDGIFVAQTD 190 (275)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEE-EEEEEEEECC
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcC
Confidence 7899999977665432 3679999999999 9999999653
No 165
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.45 E-value=5.3e-13 Score=114.02 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=76.5
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.+++.+|||+|||+|..+..++++ ..+|+++|+|+.+++.|+++ ++++++.+| +.. ++..+
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D------~~~~l~~~~ 161 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIAN------GAEYVRKFK 161 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC------HHHHGGGCS
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc------HHHHHhhCC
Confidence 456689999999999999999987 46999999999999988752 467777765 222 22245
Q ss_pred CceeeEEEccccccCC------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 98 SSVDLVTIASALHWFD------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
++||+|++...-+|+. ...+++++.++|+ |||+|++...+
T Consensus 162 ~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~ 207 (296)
T 1inl_A 162 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALK-EDGVFSAETED 207 (296)
T ss_dssp SCEEEEEEEC----------CCSHHHHHHHHHHEE-EEEEEEEECCC
T ss_pred CCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcC-CCcEEEEEccC
Confidence 7899999876555442 3679999999999 99999996543
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=3.4e-13 Score=111.03 Aligned_cols=98 Identities=17% Similarity=0.087 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHH----HHhcCCCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLK----FAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++ .+++..++.+..++.. +...++..+++||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~---~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDAR---HPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTT---CGGGGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccC---ChhhhcccCCcEEEEE
Confidence 46789999999999999999987 269999999977554 4445578888887611 1112344567899999
Q ss_pred EccccccCCh-hHHHHHHHHhhcCCCeEEEEE
Q 037961 105 IASALHWFDL-PQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 105 ~~~~~~~~d~-~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+..+ ..+. ..++.++.++|| |||.+++.
T Consensus 153 ~~~~--~~~~~~~~~~~~~~~Lk-pgG~l~i~ 181 (233)
T 2ipx_A 153 ADVA--QPDQTRIVALNAHTFLR-NGGHFVIS 181 (233)
T ss_dssp ECCC--CTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EcCC--CccHHHHHHHHHHHHcC-CCeEEEEE
Confidence 9655 2233 345889999999 99999983
No 167
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.44 E-value=3.9e-13 Score=113.57 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ .++++..+| +.+ ++++++||
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d------~~~-~~~~~~fD 181 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD------IAD-FISDQMYD 181 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC------TTT-CCCSCCEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc------hhc-cCcCCCcc
Confidence 46789999999999999999987 68999999999999988752 357777665 333 34667899
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+|++ |.-++..+++++.++|| |||.+++....
T Consensus 182 ~Vi~----~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 213 (275)
T 1yb2_A 182 AVIA----DIPDPWNHVQKIASMMK-PGSVATFYLPN 213 (275)
T ss_dssp EEEE----CCSCGGGSHHHHHHTEE-EEEEEEEEESS
T ss_pred EEEE----cCcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 9998 34488899999999999 99999996644
No 168
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.44 E-value=4.8e-13 Score=117.47 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc--cCCCCce
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN--VATQSSV 100 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~ 100 (262)
....+|||||||+|.++..+++. +.+++++|+ +.+++.|++. .++++..+| +.+. |++ ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~p-~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGAN------LLDRDVPFP-TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECC------CCSSSCCCC-CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcc------ccccCCCCC-CCc
Confidence 35678999999999999999985 568999999 9999998853 368888876 3332 344 689
Q ss_pred eeEEEccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEec
Q 037961 101 DLVTIASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 101 D~V~~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
|+|++..++|++ |. .+++++++++|| |||+|++...
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 288 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIG-KDSKVYIMET 288 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCC-TTCEEEEEEC
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcC-CCcEEEEEee
Confidence 999999999977 44 368999999999 9999998654
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.44 E-value=3.2e-13 Score=117.06 Aligned_cols=95 Identities=22% Similarity=0.179 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
.++.+|||+|||+|.++..+++.+. +|+|+|+| .|++.|++. .+++++.++ ++++++++++||+|
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d------~~~~~~~~~~~D~I 109 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGK------LEDVHLPFPKVDII 109 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESC------TTTSCCSSSCEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECc------hhhccCCCCcccEE
Confidence 3667899999999999999998875 89999999 689888752 357888765 55566667899999
Q ss_pred EEccccc---cC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 104 TIASALH---WF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~~~---~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++....+ +. ++..++.++.++|| |||.++.
T Consensus 110 vs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li~ 143 (328)
T 1g6q_1 110 ISEWMGYFLLYESMMDTVLYARDHYLV-EGGLIFP 143 (328)
T ss_dssp EECCCBTTBSTTCCHHHHHHHHHHHEE-EEEEEES
T ss_pred EEeCchhhcccHHHHHHHHHHHHhhcC-CCeEEEE
Confidence 9975433 33 56789999999999 9999973
No 170
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=1.5e-13 Score=112.68 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=78.3
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhh-C-------CeEEEEcCCHHHHHHHhcC-----------CCceEEeCCC
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQI-Y-------QHVIATDTSPKQLKFAIKL-----------PNIRYQLTPT 84 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~-------~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~ 84 (262)
.+.+.....++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++ .++.+..++
T Consensus 75 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d- 153 (227)
T 1r18_A 75 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD- 153 (227)
T ss_dssp HHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC-
T ss_pred HHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC-
Confidence 3333334567789999999999999999884 3 4899999999999998752 467888776
Q ss_pred CchhhhhhccCCC-CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 85 MSITELEQNVATQ-SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 85 ~~~~~~~~~~~~~-~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.. ++++ ++||+|++..+++++. +++.++|| |||++++..
T Consensus 154 -----~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~Lk-pgG~lvi~~ 194 (227)
T 1r18_A 154 -----GRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLA-SGGRLIVPV 194 (227)
T ss_dssp -----GGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEE-EEEEEEEEE
T ss_pred -----ccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhc-CCCEEEEEE
Confidence 322 2233 7899999999998764 68899999 999999844
No 171
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.44 E-value=4.1e-13 Score=118.09 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 102 (262)
++..+|||||||+|..+..+++. ..+++++|+ +.+++.+++. .++++..+| +.+ +++. .||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~-~~~~-~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGD------FFK-PLPV-TADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC------TTS-CCSC-CEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCC------CCC-cCCC-CCCE
Confidence 46789999999999999999987 468999999 9999998752 368888876 222 2233 4999
Q ss_pred EEEccccccC-Chh--HHHHHHHHhhcCCCeEEEEEec
Q 037961 103 VTIASALHWF-DLP--QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 103 V~~~~~~~~~-d~~--~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
|++..++|++ +.. ++++++.++|| |||+|++...
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALE-PGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEec
Confidence 9999999988 443 79999999999 9999998665
No 172
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.44 E-value=3.6e-13 Score=110.17 Aligned_cols=102 Identities=19% Similarity=0.183 Sum_probs=78.7
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhh-C--CeEEEEcCCHHHHHHHhcC-----------CCceEEeCCCCchhh
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQI-Y--QHVIATDTSPKQLKFAIKL-----------PNIRYQLTPTMSITE 89 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~~~ 89 (262)
++.+.....++.+|||+|||+|..+..+++. + .+|+++|+|+.+++.++++ .++.+..++
T Consensus 68 l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------ 141 (226)
T 1i1n_A 68 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------ 141 (226)
T ss_dssp HHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------
T ss_pred HHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC------
Confidence 3333333567889999999999999999986 3 5999999999999988742 367777765
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+......+++||+|++...++.+ ++++.++|| |||++++...
T Consensus 142 ~~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~~Lk-pgG~lv~~~~ 183 (226)
T 1i1n_A 142 GRMGYAEEAPYDAIHVGAAAPVV-----PQALIDQLK-PGGRLILPVG 183 (226)
T ss_dssp GGGCCGGGCCEEEEEECSBBSSC-----CHHHHHTEE-EEEEEEEEES
T ss_pred cccCcccCCCcCEEEECCchHHH-----HHHHHHhcC-CCcEEEEEEe
Confidence 33333346789999998888654 468899999 9999998543
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.43 E-value=2.5e-13 Score=121.14 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=81.3
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHH-------hc--------CCCceEEeC
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFA-------IK--------LPNIRYQLT 82 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a-------~~--------~~~~~~~~~ 82 (262)
.++..++..+ .++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.| ++ ..++.+..+
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 3444555444 47789999999999999999985 4 4799999999998887 53 246778776
Q ss_pred CCCchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 83 PTMSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.+..+ ..+....++||+|+++..++.-+...+++++.++|| |||.|++.
T Consensus 309 D~~~~~--~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LK-pGG~lVi~ 358 (433)
T 1u2z_A 309 KSFVDN--NRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAK-VGCKIISL 358 (433)
T ss_dssp SCSTTC--HHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCC-TTCEEEES
T ss_pred Cccccc--cccccccCCCCEEEEeCccccccHHHHHHHHHHhCC-CCeEEEEe
Confidence 521100 001001368999999877744478889999999999 99999984
No 174
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=5.8e-13 Score=114.11 Aligned_cols=114 Identities=11% Similarity=0.109 Sum_probs=85.5
Q ss_pred CChHHHHHHHHh---hCCCC--CeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCC
Q 037961 18 NYPKELFKLIAS---KTPKR--NLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPT 84 (262)
Q Consensus 18 ~yp~~~~~~l~~---~~~~~--~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~ 84 (262)
.|.+.+...+.. ..+.. .+|||||||+|.+++.+++. +.+|++||+++.|++.|+++ ++++++.+|
T Consensus 69 ~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~D- 147 (317)
T 3gjy_A 69 EYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDD- 147 (317)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESC-
T ss_pred HHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECc-
Confidence 355666665553 23433 48999999999999999983 56999999999999999863 467888776
Q ss_pred Cchhhhhhc--cCCCCceeeEEEccccccC-----ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 85 MSITELEQN--VATQSSVDLVTIASALHWF-----DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 85 ~~~~~~~~~--~~~~~~~D~V~~~~~~~~~-----d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+..+ ..++++||+|++....++. ....+++++.++|+ |||+|++....
T Consensus 148 -----a~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~Lk-pgGvlv~~~~~ 202 (317)
T 3gjy_A 148 -----ARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLA-PGGLYVANCGD 202 (317)
T ss_dssp -----HHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred -----HHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 3222 2346789999997655543 23679999999999 99999986543
No 175
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.43 E-value=9.5e-13 Score=115.32 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=82.3
Q ss_pred HHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh
Q 037961 24 FKLIASKT--PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 24 ~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 92 (262)
...+.... ++..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. .++++..+| +.+
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~ 251 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVD------IYK 251 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECC------TTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCc------ccc
Confidence 34444443 46789999999999999999987 458999999 9999998752 248888776 434
Q ss_pred ccCCCCceeeEEEccccccC-C--hhHHHHHHHHhhcCCCeEEEEEec
Q 037961 93 NVATQSSVDLVTIASALHWF-D--LPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~-d--~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.++++ +|+|++..++|++ | ..++++++.++|| |||+|++...
T Consensus 252 ~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~ 296 (359)
T 1x19_A 252 ESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMR-SGGRLLILDM 296 (359)
T ss_dssp SCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEE
T ss_pred CCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcC-CCCEEEEEec
Confidence 44444 3999999999977 4 5779999999999 9999988554
No 176
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.43 E-value=6.2e-13 Score=114.53 Aligned_cols=99 Identities=20% Similarity=0.232 Sum_probs=79.8
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----------CCceEEeCCCCchhhhhh-ccCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----------PNIRYQLTPTMSITELEQ-NVAT 96 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~~~~~~-~~~~ 96 (262)
.++..+|||||||+|..+..++++ ..+|+++|+++.+++.|++. ++++++.+| +.. ++..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D------~~~~l~~~ 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD------ARAYLERT 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC------HHHHHHHC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEch------HHHHHHhc
Confidence 466789999999999999999986 56899999999999998752 467777776 322 2224
Q ss_pred CCceeeEEEcccccc---CC-----hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 97 QSSVDLVTIASALHW---FD-----LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~---~d-----~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++||+|++....|+ -. ...+++++.++|+ |||+|+++.
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 195 (314)
T 1uir_A 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLN-PGGVMGMQT 195 (314)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcC-CCcEEEEEc
Confidence 678999999888777 21 3678999999999 999999854
No 177
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.43 E-value=3.4e-13 Score=108.69 Aligned_cols=93 Identities=19% Similarity=0.213 Sum_probs=75.9
Q ss_pred CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
++.+|||+|||+|..+..++.. +.+++++|+|+.+++.+++. .++.+..++ +.+.+ +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~-~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSR------VEEFP-SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECC------TTTSC-CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecc------hhhCC-ccCCcCEEE
Confidence 4679999999999999999986 67999999999999988752 457787765 33333 457899999
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++. .-+...+++++.++|+ |||.+++..
T Consensus 138 ~~~---~~~~~~~l~~~~~~L~-~gG~l~~~~ 165 (207)
T 1jsx_A 138 SRA---FASLNDMVSWCHHLPG-EQGRFYALK 165 (207)
T ss_dssp CSC---SSSHHHHHHHHTTSEE-EEEEEEEEE
T ss_pred Eec---cCCHHHHHHHHHHhcC-CCcEEEEEe
Confidence 753 2367889999999999 999999854
No 178
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=8.8e-13 Score=106.74 Aligned_cols=93 Identities=14% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-ccCCCCcee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ-NVATQSSVD 101 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~D 101 (262)
+..+|||+|||+|..+..++.. +.+|+++|+|+.+++.|+++ .++++..++ +.+ ++..++ ||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~~-fD 128 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGD------PLGIAAGQRD-ID 128 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESC------HHHHHTTCCS-EE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEec------HHHHhccCCC-CC
Confidence 5678999999999999999986 67999999999999998853 257788765 322 233345 99
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+|++... ..+...+++++.++|| |||.|++-
T Consensus 129 ~v~~~~~--~~~~~~~l~~~~~~Lk-pgG~lv~~ 159 (210)
T 3c3p_A 129 ILFMDCD--VFNGADVLERMNRCLA-KNALLIAV 159 (210)
T ss_dssp EEEEETT--TSCHHHHHHHHGGGEE-EEEEEEEE
T ss_pred EEEEcCC--hhhhHHHHHHHHHhcC-CCeEEEEE
Confidence 9998732 2377889999999999 99999883
No 179
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.42 E-value=8.5e-13 Score=109.85 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-ccC--CCC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ-NVA--TQS 98 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~-~~~--~~~ 98 (262)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++ .++++..++ +.+ ++. ..+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d------~~~~l~~~~~~~ 135 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP------ALQSLESLGECP 135 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC------HHHHHHTCCSCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC------HHHHHHhcCCCC
Confidence 35678999999999999999987 67999999999999998853 368888876 222 221 235
Q ss_pred ceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 99 SVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 99 ~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+||+|++... .-+...+++++.++|| |||+|++-+
T Consensus 136 ~fD~V~~d~~--~~~~~~~l~~~~~~Lk-pGG~lv~~~ 170 (248)
T 3tfw_A 136 AFDLIFIDAD--KPNNPHYLRWALRYSR-PGTLIIGDN 170 (248)
T ss_dssp CCSEEEECSC--GGGHHHHHHHHHHTCC-TTCEEEEEC
T ss_pred CeEEEEECCc--hHHHHHHHHHHHHhcC-CCeEEEEeC
Confidence 8999998653 1256779999999999 999998843
No 180
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.42 E-value=5.7e-13 Score=111.62 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=73.1
Q ss_pred CCCeEEEEcCcc--cHhHHHHHh---hCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCcee
Q 037961 33 KRNLAWDVGTRS--GQAAASLAQ---IYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVD 101 (262)
Q Consensus 33 ~~~~vlDvGcG~--G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D 101 (262)
....+||||||+ +..+..+++ ..++|+++|.|+.|++.|+++ .++.++++|......+-.-+...++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 336899999997 334444443 268999999999999999863 247888887111110000010023344
Q ss_pred -----eEEEccccccC-C---hhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 102 -----LVTIASALHWF-D---LPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 102 -----~V~~~~~~~~~-d---~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.|+++.++||+ | +..+++++.++|+ |||+|++.....
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~-PGG~Lvls~~~~ 203 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP-SGSYLAMSIGTA 203 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC-TTCEEEEEEECC
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC-CCcEEEEEeccC
Confidence 58899999999 6 3569999999999 999999965543
No 181
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.42 E-value=9.9e-13 Score=107.68 Aligned_cols=114 Identities=21% Similarity=0.150 Sum_probs=81.1
Q ss_pred hCCCChHHHHHHHHh---h--CCCCCeEEEEcCcccHhHHHHHhh-C--CeEEEEcCCHHHHHHHhc----CCCceEEeC
Q 037961 15 ARPNYPKELFKLIAS---K--TPKRNLAWDVGTRSGQAAASLAQI-Y--QHVIATDTSPKQLKFAIK----LPNIRYQLT 82 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~---~--~~~~~~vlDvGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~----~~~~~~~~~ 82 (262)
.+|.++. +...+.. . ..++.+|||+|||+|..+..+++. + .+|+|+|+|+.|++.+++ .+++.+..+
T Consensus 51 ~~p~~~~-~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~ 129 (227)
T 1g8a_A 51 WNPNRSK-LGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILG 129 (227)
T ss_dssp CCTTTCH-HHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEEC
T ss_pred eCCCchh-HHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEc
Confidence 4676644 3455532 2 246789999999999999999976 3 699999999988877653 367888887
Q ss_pred CCCchhhhhhccCCCCceeeEEEccccccCChh-HHHHHHHHhhcCCCeEEEEE
Q 037961 83 PTMSITELEQNVATQSSVDLVTIASALHWFDLP-QFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~-~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.. +........++||+|++... ..+.. .++.++.++|| |||.+++.
T Consensus 130 d~~---~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~Lk-pgG~l~~~ 177 (227)
T 1g8a_A 130 DAT---KPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLK-RGGYGMIA 177 (227)
T ss_dssp CTT---CGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred cCC---CcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcC-CCCEEEEE
Confidence 611 11111112358999998765 22333 35999999999 99999985
No 182
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.42 E-value=2.8e-12 Score=106.13 Aligned_cols=109 Identities=20% Similarity=0.209 Sum_probs=84.2
Q ss_pred CChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchh
Q 037961 18 NYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSIT 88 (262)
Q Consensus 18 ~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~ 88 (262)
.||.... .+.... .++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++ .++++..++
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d----- 148 (248)
T 2yvl_A 75 IYPKDSF-YIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVD----- 148 (248)
T ss_dssp CCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSC-----
T ss_pred ccchhHH-HHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcC-----
Confidence 3455543 444444 4778999999999999999998888999999999999998852 467777665
Q ss_pred hhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 89 ELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+..+++++||+|+++. -++..+++++.++|+ |||.+++....
T Consensus 149 -~~~~~~~~~~~D~v~~~~----~~~~~~l~~~~~~L~-~gG~l~~~~~~ 192 (248)
T 2yvl_A 149 -FKDAEVPEGIFHAAFVDV----REPWHYLEKVHKSLM-EGAPVGFLLPT 192 (248)
T ss_dssp -TTTSCCCTTCBSEEEECS----SCGGGGHHHHHHHBC-TTCEEEEEESS
T ss_pred -hhhcccCCCcccEEEECC----cCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 333222457899999842 277889999999999 99999996654
No 183
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.42 E-value=1.5e-12 Score=113.97 Aligned_cols=112 Identities=21% Similarity=0.115 Sum_probs=88.0
Q ss_pred hHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC---CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchh
Q 037961 20 PKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY---QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSIT 88 (262)
Q Consensus 20 p~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~ 88 (262)
.+.+...+.... .++..|||+|||+|.++..++..+ .+++|+|+|+.|++.|+++ .++++.++|
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D----- 262 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD----- 262 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC-----
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC-----
Confidence 355555555544 467789999999999999999865 8999999999999999863 367888765
Q ss_pred hhhhccCCCCceeeEEEccccccC-C--------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 89 ELEQNVATQSSVDLVTIASALHWF-D--------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~-d--------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+++.+.++||+|+++..+++. . ...+++++.++|| |||.+++.+..
T Consensus 263 -~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~t~~ 319 (354)
T 3tma_A 263 -ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLP-PGGRVALLTLR 319 (354)
T ss_dssp -GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSC-TTCEEEEEESC
T ss_pred -hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 56666566779999998877654 2 2568999999999 99999997654
No 184
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.41 E-value=6.3e-13 Score=116.10 Aligned_cols=94 Identities=24% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ |++.|++. .+++++.++ +++++++ ++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d------~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGK------VEEVSLP-EQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESC------TTTCCCS-SCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcc------hhhCCCC-CceeEE
Confidence 3678999999999999999998865 999999996 88887642 468888765 4444444 679999
Q ss_pred EEccccccC-C--hhHHHHHHHHhhcCCCeEEEE
Q 037961 104 TIASALHWF-D--LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~~~~~-d--~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++...++++ + ....+.++.++|| |||.+++
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~ 153 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLK-PSGNMFP 153 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEE-EEEEEES
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcC-CCeEEEE
Confidence 999776654 2 3468889999999 9999985
No 185
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.41 E-value=1.1e-12 Score=108.88 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=75.7
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhc--------------CCCceEEeCCCCchhhhhh-cc-
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIK--------------LPNIRYQLTPTMSITELEQ-NV- 94 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~--------------~~~~~~~~~~~~~~~~~~~-~~- 94 (262)
++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++ ..++.++.+| +.+ ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D------~~~~l~~ 122 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGN------AMKFLPN 122 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECC------TTSCGGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEecc------HHHHHHH
Confidence 56789999999999999999875 479999999999988753 2578888876 222 33
Q ss_pred -CCCCceeeEEEccccccCCh---------hHHHHHHHHhhcCCCeEEEEEe
Q 037961 95 -ATQSSVDLVTIASALHWFDL---------PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 95 -~~~~~~D~V~~~~~~~~~d~---------~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++.+++|.|+....-.|... ..+++++.++|+ |||.|++.+
T Consensus 123 ~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lk-pgG~l~~~t 173 (246)
T 2vdv_E 123 FFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLK-EGGVVYTIT 173 (246)
T ss_dssp TSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcC-CCCEEEEEe
Confidence 56789999996654444311 479999999999 999999854
No 186
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=1.1e-12 Score=113.14 Aligned_cols=100 Identities=13% Similarity=0.148 Sum_probs=77.4
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.+++.+|||+|||+|..+..++++ ..+|+++|+|+.+++.|+++ +++++..+| +.+ ++..+
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D------~~~~l~~~~ 187 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED------ASKFLENVT 187 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC------HHHHHHHCC
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEcc------HHHHHhhcC
Confidence 456689999999999999999986 57999999999999998752 356777765 222 22235
Q ss_pred CceeeEEEccccccCC-----hhHHHHHHHHhhcCCCeEEEEEec
Q 037961 98 SSVDLVTIASALHWFD-----LPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d-----~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++||+|+++..-++-. ...+++++.++|+ |||.+++...
T Consensus 188 ~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 231 (321)
T 2pt6_A 188 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCE 231 (321)
T ss_dssp SCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CCceEEEECCcCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcC
Confidence 7899999876433321 1679999999999 9999999653
No 187
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=6.2e-13 Score=111.49 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-C---------CceEEeCCCCch-hhhhhccCCCC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-P---------NIRYQLTPTMSI-TELEQNVATQS 98 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-~---------~~~~~~~~~~~~-~~~~~~~~~~~ 98 (262)
.++.+|||+|||+|.++..++.++ .+|+|+|+++.+++.|+++ . ++.++.+|.... ......+++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 366789999999999999999884 6899999999999999853 1 367777761111 00000124678
Q ss_pred ceeeEEEccccccC-------------------ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 99 SVDLVTIASALHWF-------------------DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 99 ~~D~V~~~~~~~~~-------------------d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+||+|+++..+++. +...+++.+.++|| |||.|++..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 170 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLIS 170 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEE
Confidence 99999998655442 36779999999999 999999844
No 188
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=1.2e-12 Score=113.53 Aligned_cols=98 Identities=16% Similarity=0.228 Sum_probs=77.3
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhhc-c-CC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQN-V-AT 96 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~-~-~~ 96 (262)
.++..+|||||||+|..++.++++ ..+|+++|+|+.|++.|+++ ++++++.+| +... + .+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D------~~~~l~~~~ 191 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD------GVAFLKNAA 191 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC------HHHHHHTSC
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECC------HHHHHHhcc
Confidence 456789999999999999999986 46999999999999998852 467888776 3222 1 24
Q ss_pred CCceeeEEEccccccC--C---hhHHHHHHHHhhcCCCeEEEEE
Q 037961 97 QSSVDLVTIASALHWF--D---LPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~--d---~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+++||+|++...-++. + ...+++++.++|+ |||+|++.
T Consensus 192 ~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~ 234 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALR-PGGVVCTQ 234 (334)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcC-CCcEEEEe
Confidence 6789999997653332 2 4679999999999 99999984
No 189
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.41 E-value=9.6e-13 Score=108.47 Aligned_cols=105 Identities=17% Similarity=0.171 Sum_probs=80.4
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELE 91 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~ 91 (262)
+.+...+.... .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|+++ .++.+..++ +
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~- 149 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD------G- 149 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------G-
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC------c-
Confidence 34444444433 467789999999999999999886 8999999999999998852 467777765 2
Q ss_pred hccCCC-CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 92 QNVATQ-SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 92 ~~~~~~-~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
..++++ .+||+|++..+++++. .++.++|+ |||++++....
T Consensus 150 ~~~~~~~~~fD~Ii~~~~~~~~~-----~~~~~~L~-pgG~lvi~~~~ 191 (235)
T 1jg1_A 150 SKGFPPKAPYDVIIVTAGAPKIP-----EPLIEQLK-IGGKLIIPVGS 191 (235)
T ss_dssp GGCCGGGCCEEEEEECSBBSSCC-----HHHHHTEE-EEEEEEEEECS
T ss_pred ccCCCCCCCccEEEECCcHHHHH-----HHHHHhcC-CCcEEEEEEec
Confidence 122233 3599999999998874 37899999 99999985443
No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.40 E-value=1.1e-12 Score=111.15 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=82.5
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcC-CHHHHHHHhcCC----------------CceEE
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDT-SPKQLKFAIKLP----------------NIRYQ 80 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~-s~~~~~~a~~~~----------------~~~~~ 80 (262)
..+.+++.... .++.+|||+|||+|.++..++..+. +|+++|+ |+.+++.++++. ++.+.
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 34566666554 4677999999999999999998876 8999999 899999887532 34454
Q ss_pred eCCCCchhh-hhhcc--CCCCceeeEEEccccccC-ChhHHHHHHHHhhcC--C--CeEEEE
Q 037961 81 LTPTMSITE-LEQNV--ATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKK--P--SGVIAA 134 (262)
Q Consensus 81 ~~~~~~~~~-~~~~~--~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~--p--gG~l~i 134 (262)
..+ .++ ...+. +++++||+|+++.++++. +...+++.+.++|+. | ||++++
T Consensus 145 ~~~---~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 145 PYR---WGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp ECC---TTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred Eec---CCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 333 011 11111 135789999999999888 888999999999981 4 998776
No 191
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.40 E-value=2.6e-12 Score=108.48 Aligned_cols=109 Identities=22% Similarity=0.206 Sum_probs=84.2
Q ss_pred CCChHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCC
Q 037961 17 PNYPKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPT 84 (262)
Q Consensus 17 p~yp~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~ 84 (262)
+.||... ..+.... .++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++ .++.+..+|
T Consensus 95 ~~~~~~~-~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d- 172 (277)
T 1o54_A 95 IVYPKDS-SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD- 172 (277)
T ss_dssp CCCHHHH-HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC-
T ss_pred ccCHHHH-HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC-
Confidence 4566554 3444433 46789999999999999999987 57999999999999998853 356777655
Q ss_pred CchhhhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 85 MSITELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 85 ~~~~~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+. +++++||+|+++ .-++..+++++.++|+ |||.|++....
T Consensus 173 -----~~~~-~~~~~~D~V~~~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 215 (277)
T 1o54_A 173 -----ISEG-FDEKDVDALFLD----VPDPWNYIDKCWEALK-GGGRFATVCPT 215 (277)
T ss_dssp -----GGGC-CSCCSEEEEEEC----CSCGGGTHHHHHHHEE-EEEEEEEEESS
T ss_pred -----HHHc-ccCCccCEEEEC----CcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 3333 456789999984 2377789999999999 99999996654
No 192
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=9.9e-13 Score=114.05 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------C--CceEEeCCCCchhhhhhcc----CCCCc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------P--NIRYQLTPTMSITELEQNV----ATQSS 99 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~--~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (262)
+++.+|||+|||+|.++..++..+++|+++|+|+.+++.|+++ . ++.++++| +.++. ...++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D------~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICED------AMKFIQREERRGST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSC------HHHHHHHHHHHTCC
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc------HHHHHHHHHhcCCC
Confidence 4667999999999999999999988999999999999999863 2 37888776 22221 01468
Q ss_pred eeeEEEccc----------cccC-ChhHHHHHHHHhhcCCCeEEEEEe-cCCCcccHHHHHhhccc
Q 037961 100 VDLVTIASA----------LHWF-DLPQFYKQVKWVLKKPSGVIAAWT-YTMPEINESVGAVFKPF 153 (262)
Q Consensus 100 ~D~V~~~~~----------~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~-~~~~~~~~~~~~~~~~~ 153 (262)
||+|+++.. +++. +...+++++.++|+ |||.|++.. +....-...+.+++.+.
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lk-pgG~lli~~~~~~~~~~~~~~~~l~~a 290 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILS-PKALGLVLTAYSIRASFYSMHELMRET 290 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBC-TTCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcC-cCcEEEEEECCCCCCCHHHHHHHHHHH
Confidence 999999543 2334 56789999999999 999977644 33222124455555543
No 193
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=1.8e-12 Score=109.45 Aligned_cols=101 Identities=18% Similarity=0.144 Sum_probs=82.0
Q ss_pred HHhhCCCCCeEEEEcCcccHhHHHHHhhCC--eEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCC
Q 037961 27 IASKTPKRNLAWDVGTRSGQAAASLAQIYQ--HVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQS 98 (262)
Q Consensus 27 l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 98 (262)
+.....++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++ .++.+..+| +.+.+. .+
T Consensus 113 ~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d------~~~~~~-~~ 185 (272)
T 3a27_A 113 MAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILAD------NRDVEL-KD 185 (272)
T ss_dssp HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESC------GGGCCC-TT
T ss_pred HHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECC------hHHcCc-cC
Confidence 344467888999999999999999999854 999999999999998852 467777765 444422 56
Q ss_pred ceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 99 SVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 99 ~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+||+|+++... +...++.++.++|+ |||.+++.+..
T Consensus 186 ~~D~Vi~d~p~---~~~~~l~~~~~~Lk-pgG~l~~s~~~ 221 (272)
T 3a27_A 186 VADRVIMGYVH---KTHKFLDKTFEFLK-DRGVIHYHETV 221 (272)
T ss_dssp CEEEEEECCCS---SGGGGHHHHHHHEE-EEEEEEEEEEE
T ss_pred CceEEEECCcc---cHHHHHHHHHHHcC-CCCEEEEEEcC
Confidence 89999998764 77889999999999 99999985543
No 194
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.39 E-value=1.2e-12 Score=113.67 Aligned_cols=112 Identities=16% Similarity=0.192 Sum_probs=80.0
Q ss_pred CCChHHHHHHHHh-hCCCCCeEEEEcCcccHhHHHHHhh-C--CeEEEEcCCHHHHHHHhcC-----------------C
Q 037961 17 PNYPKELFKLIAS-KTPKRNLAWDVGTRSGQAAASLAQI-Y--QHVIATDTSPKQLKFAIKL-----------------P 75 (262)
Q Consensus 17 p~yp~~~~~~l~~-~~~~~~~vlDvGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~-----------------~ 75 (262)
..||......+.. ...++.+|||+|||+|.++..++.. + .+|+++|+++.+++.|+++ .
T Consensus 88 ~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 88 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred ccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 3555533222222 2357889999999999999999987 4 7899999999999998752 4
Q ss_pred CceEEeCCCCchhhhhhc--cCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 76 NIRYQLTPTMSITELEQN--VATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~--~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
++.+..+| +.+. ++++++||+|+++.. ++..+++++.++|+ |||.|++.....
T Consensus 168 ~v~~~~~d------~~~~~~~~~~~~fD~V~~~~~----~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 222 (336)
T 2b25_A 168 NVDFIHKD------ISGATEDIKSLTFDAVALDML----NPHVTLPVFYPHLK-HGGVCAVYVVNI 222 (336)
T ss_dssp CEEEEESC------TTCCC-------EEEEEECSS----STTTTHHHHGGGEE-EEEEEEEEESSH
T ss_pred ceEEEECC------hHHcccccCCCCeeEEEECCC----CHHHHHHHHHHhcC-CCcEEEEEeCCH
Confidence 67787766 3332 345678999998543 45568999999999 999999866543
No 195
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.39 E-value=1.6e-13 Score=108.04 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhccC---CCCceeeEEE
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNVA---TQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~D~V~~ 105 (262)
++++.+|||+|||+ +++|+|+.|++.|++. .++++..++ ++++++ ++++||+|++
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~~~~~~~~d------~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGNEGRVSVEN------IKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTTTSEEEEEE------GGGGGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcccCcEEEEec------hhcCccccCCCCCEeEEEE
Confidence 46889999999996 2499999999999864 357777654 555555 7889999999
Q ss_pred ccccccC--ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 106 ASALHWF--DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 106 ~~~~~~~--d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.++||+ |+..++++++|+|| |||.|++.
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~Lk-pgG~l~~~ 100 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILR-PGGCLFLK 100 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEE-EEEEEEEE
T ss_pred CChhhhcccCHHHHHHHHHHHCC-CCEEEEEE
Confidence 9999998 88889999999999 99999983
No 196
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.39 E-value=1.2e-12 Score=106.97 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=75.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc--CCCCce
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV--ATQSSV 100 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~ 100 (262)
++.+|||+|||+|..+..++.. +.+|+++|+++.+++.|++. .++++..++.. ....... ...++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAK--DTLAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHH--HHHHHhhhccCCCCc
Confidence 5678999999999999999986 67999999999999998853 35888887610 0111111 011789
Q ss_pred eeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 101 DLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 101 D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+|++... . +...+++++.++|| |||+|++-.
T Consensus 142 D~v~~~~~---~~~~~~~l~~~~~~L~-pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDAD---KANTDLYYEESLKLLR-EGGLIAVDN 174 (225)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence 99996543 3 57779999999999 999999843
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.38 E-value=2.1e-12 Score=109.55 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=78.1
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.+++.+|||+|||+|..++.+++. ..+|+++|+++.+++.|++. +++++..+| +.. ++..+
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D------~~~~l~~~~ 149 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED------ASKFLENVT 149 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC------HHHHHHHCC
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECC------hHHHHHhCC
Confidence 356789999999999999999886 46999999999999998852 456777765 222 22236
Q ss_pred CceeeEEEccccccCCh-----hHHHHHHHHhhcCCCeEEEEEec
Q 037961 98 SSVDLVTIASALHWFDL-----PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d~-----~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++||+|++....++... ..+++++.++|+ |||++++...
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~~ 193 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCE 193 (283)
T ss_dssp SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEE-EEEEEEEECC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEECC
Confidence 78999999765554311 579999999999 9999998643
No 198
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.38 E-value=2.2e-12 Score=108.18 Aligned_cols=92 Identities=17% Similarity=0.082 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhhccCCCCce
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (262)
.+.+.+|||+|||+|.+++.+++++.+|+++|+++.|++.|++. +++++..+| +.... ++|
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D------~~~~~---~~f 140 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQL------LDLDI---KKY 140 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSG------GGSCC---CCE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEech------HHHHH---hhC
Confidence 35668999999999999999887767899999999999999863 245666543 44432 789
Q ss_pred eeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 101 DLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 101 D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+|++.. .|+..+++++.++|+ |||++++..
T Consensus 141 D~Ii~d~----~dp~~~~~~~~~~L~-pgG~lv~~~ 171 (262)
T 2cmg_A 141 DLIFCLQ----EPDIHRIDGLKRMLK-EDGVFISVA 171 (262)
T ss_dssp EEEEESS----CCCHHHHHHHHTTEE-EEEEEEEEE
T ss_pred CEEEECC----CChHHHHHHHHHhcC-CCcEEEEEc
Confidence 9999873 377779999999999 999999864
No 199
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.38 E-value=1.3e-12 Score=106.63 Aligned_cols=99 Identities=17% Similarity=0.197 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCC-CCce
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVAT-QSSV 100 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~ 100 (262)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++ .++++..++.. .....++.. .++|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~~~~f 134 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL--DSLQQIENEKYEPF 134 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHHTTCCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHHHHHHhcCCCCc
Confidence 36678999999999999999987 67999999999999998752 35888887710 001111111 2679
Q ss_pred eeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 101 DLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 101 D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
|+|++....+ +...+++++.++|+ |||+|++-
T Consensus 135 D~v~~d~~~~--~~~~~l~~~~~~L~-pgG~lv~~ 166 (223)
T 3duw_A 135 DFIFIDADKQ--NNPAYFEWALKLSR-PGTVIIGD 166 (223)
T ss_dssp SEEEECSCGG--GHHHHHHHHHHTCC-TTCEEEEE
T ss_pred CEEEEcCCcH--HHHHHHHHHHHhcC-CCcEEEEe
Confidence 9999875522 55679999999999 99988873
No 200
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.38 E-value=2.2e-12 Score=110.55 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=76.0
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.++..+|||||||+|.+++.++++. .+|+++|+++.+++.|+++ ++++++.+| +.. ++..+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~D------a~~~l~~~~ 166 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD------GFEFMKQNQ 166 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC------HHHHHHTCS
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc------HHHHHhhCC
Confidence 3566899999999999999999874 6999999999999998752 467777765 322 23346
Q ss_pred CceeeEEEccccccC-----ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 98 SSVDLVTIASALHWF-----DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~-----d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++||+|++....++. ....+++++.++|+ |||+|++..
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 209 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALK-EDGVLCCQG 209 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccC-CCeEEEEec
Confidence 789999997765543 23568999999999 999999854
No 201
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.37 E-value=3.3e-12 Score=108.27 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=76.0
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC----------------CCceEEeCCCCchhhhhh-
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL----------------PNIRYQLTPTMSITELEQ- 92 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----------------~~~~~~~~~~~~~~~~~~- 92 (262)
.+++.+|||+|||+|.++..++++ ..+|+++|+++.+++.|+++ +++++..+| +..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D------~~~~ 146 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD------GFEF 146 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC------HHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECc------hHHH
Confidence 456788999999999999999987 45899999999999998742 346666665 322
Q ss_pred ccCCCCceeeEEEccccccCC-----hhHHHHHHHHhhcCCCeEEEEEe
Q 037961 93 NVATQSSVDLVTIASALHWFD-----LPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~d-----~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.. +++||+|++....++.. ...+++++.++|+ |||++++..
T Consensus 147 l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~ 193 (281)
T 1mjf_A 147 IKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALN-NPGIYVTQA 193 (281)
T ss_dssp HHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEc
Confidence 222 57899999987655432 3668999999999 999999854
No 202
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.37 E-value=1.6e-12 Score=113.41 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhc-----CCCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIK-----LPNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
++..+|||||||+|..+..+++.+ .+++++|++ .++..++. ..++++..+| +. .+++ +||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d------~~-~~~p--~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGD------FL-REVP--HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECC------TT-TCCC--CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEecC------CC-CCCC--CCcEEE
Confidence 467899999999999999999864 478999994 55542211 1468888776 32 2233 899999
Q ss_pred EccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEec
Q 037961 105 IASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+..++|++ |. .+++++++++|| |||+|++...
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~Lk-pgG~l~i~e~ 287 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMP-AHGRVLVIDA 287 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCC-TTCEEEEEEC
T ss_pred EehhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEe
Confidence 99999988 55 479999999999 9999998554
No 203
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.37 E-value=1.8e-12 Score=107.80 Aligned_cols=101 Identities=14% Similarity=0.210 Sum_probs=77.7
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ- 92 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~- 92 (262)
+..+... .+..+|||+|||+|..+..++.. +.+|+++|+|+.+++.|+++ .++++..++ +.+
T Consensus 71 l~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd------a~~~ 143 (247)
T 1sui_A 71 LSMLLKL-INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP------ALPV 143 (247)
T ss_dssp HHHHHHH-TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC------HHHH
T ss_pred HHHHHHh-hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC------HHHH
Confidence 3444433 35578999999999999999986 67999999999999999853 357888876 221
Q ss_pred cc-C-----CCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 93 NV-A-----TQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 93 ~~-~-----~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
++ + ++++||+|++... .-+...+++++.++|| |||+|++
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~Lk-pGG~lv~ 188 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDAD--KDNYLNYHKRLIDLVK-VGGVIGY 188 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSC--STTHHHHHHHHHHHBC-TTCCEEE
T ss_pred HHHHHhccCCCCCEEEEEEcCc--hHHHHHHHHHHHHhCC-CCeEEEE
Confidence 11 1 2578999998743 1267889999999999 9999987
No 204
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.37 E-value=1.5e-12 Score=113.96 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++..+|||||||+|.++..+++.+ .+++++|+ +.+++.+++.+++++..+| +.+ +++ +||+|++..++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d------~~~-~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGD------MFK-SIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECC------TTT-CCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCc------cCC-CCC--CceEEEEcccc
Confidence 356789999999999999999874 47999999 7999988877788888876 333 334 49999999999
Q ss_pred ccC-Chh--HHHHHHHHhhcCC---CeEEEEEec
Q 037961 110 HWF-DLP--QFYKQVKWVLKKP---SGVIAAWTY 137 (262)
Q Consensus 110 ~~~-d~~--~~l~~~~r~Lk~p---gG~l~i~~~ 137 (262)
|++ |.+ ++++++.++|+ | ||+|++...
T Consensus 262 h~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAIS-HKGKDGKVIIIDI 294 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTG-GGGGGCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 988 666 89999999999 9 999998543
No 205
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.36 E-value=1.6e-12 Score=113.39 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=78.1
Q ss_pred CCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc-CCCCceeeE
Q 037961 34 RNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV-ATQSSVDLV 103 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~D~V 103 (262)
..+|||||||+|.++..+++. ..+++++|+ +.+++.+++. .++++..+| +.+.+ +.+++||+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~~D~v 252 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKN------LLDARNFEGGAADVV 252 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECC------TTCGGGGTTCCEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCC------cccCcccCCCCccEE
Confidence 789999999999999999987 468999999 8899888752 358888876 22222 134569999
Q ss_pred EEccccccCC-h--hHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWFD-L--PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~d-~--~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++..++|+++ . .++++++.++|+ |||+|++...
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 288 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVK-PGGALLILTM 288 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHHcC-CCCEEEEEEe
Confidence 9999999884 3 579999999999 9999998554
No 206
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.36 E-value=2.9e-12 Score=112.10 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 102 (262)
++..+|||+|||+|..+..+++.+ .+++++|+ +.+++.++++ .++++..+| +.+ +++. .||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~-~~~~-~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD------FFE-PLPR-KADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC------TTS-CCSS-CEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCC------CCC-CCCC-CccE
Confidence 466899999999999999999874 57899999 9999988752 368888876 222 2233 4999
Q ss_pred EEEccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++..++|++ +. .++++++.++|+ |||++++....
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALE-PGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEEEe
Confidence 9999999988 44 369999999999 99999986543
No 207
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.36 E-value=4.5e-12 Score=112.22 Aligned_cols=110 Identities=12% Similarity=0.034 Sum_probs=80.6
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhc-cCCC
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQN-VATQ 97 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~-~~~~ 97 (262)
..++....+++.+|||+|||+|.++..++..+++|+++|+|+.+++.|+++ ....+.++| +.++ +...
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D------~~~~l~~~~ 278 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGE------ALPTLRGLE 278 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESC------HHHHHHTCC
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEcc------HHHHHHHhc
Confidence 334555555689999999999999999999998999999999999999863 123455554 3332 1113
Q ss_pred CceeeEEEcccccc---------C-ChhHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 98 SSVDLVTIASALHW---------F-DLPQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 98 ~~~D~V~~~~~~~~---------~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
+.||+|+++..... . +...++..+.++|+ |||.|++.+++..
T Consensus 279 ~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~Lk-pGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLA-EEGFLWLSSCSYH 330 (393)
T ss_dssp CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTT
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCC
Confidence 44999998755311 2 34568899999999 9999997666543
No 208
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.36 E-value=2.6e-13 Score=116.36 Aligned_cols=97 Identities=10% Similarity=-0.012 Sum_probs=71.4
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcC----CHHHHHHHh--cC--CCceEEeC-CCCchhhhhhccCCCCcee
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDT----SPKQLKFAI--KL--PNIRYQLT-PTMSITELEQNVATQSSVD 101 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~----s~~~~~~a~--~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~D 101 (262)
.+++.+|||||||+|.++..++++ .+|+|+|+ ++.+++.+. .. +++.++++ | +..+ +.++||
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D------~~~l--~~~~fD 150 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVD------VFFI--PPERCD 150 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCC------TTTS--CCCCCS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccc------cccC--CcCCCC
Confidence 357789999999999999999998 68999999 665543221 11 45677665 4 3333 356899
Q ss_pred eEEEcccc---ccC-Chh---HHHHHHHHhhcCCCeEEEEEec
Q 037961 102 LVTIASAL---HWF-DLP---QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 102 ~V~~~~~~---~~~-d~~---~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+|+|..++ ||. |.. .++.++.++|| |||.|++-.+
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~Lk-pGG~~v~kv~ 192 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLS-NNTQFCVKVL 192 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCEEEEEES
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 99998775 344 444 47899999999 9999988433
No 209
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.36 E-value=1.7e-12 Score=113.93 Aligned_cols=93 Identities=20% Similarity=0.174 Sum_probs=73.4
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVT 104 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~ 104 (262)
++.+|||||||+|.++...++.|+ +|+|||.|+ |++.|++. ..|.++.++ ++++.++ ++||+|+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~------~~~~~lp-e~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGP------VETVELP-EQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESC------TTTCCCS-SCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeee------eeeecCC-ccccEEE
Confidence 678999999999999999998886 799999995 88888752 468888765 4555544 6799999
Q ss_pred Ec---cccccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 105 IA---SALHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 105 ~~---~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+. ..+.+- ..+.++....|+|| |||.++-
T Consensus 155 sE~~~~~l~~e~~l~~~l~a~~r~Lk-p~G~~iP 187 (376)
T 4hc4_A 155 SEWMGYGLLHESMLSSVLHARTKWLK-EGGLLLP 187 (376)
T ss_dssp CCCCBTTBTTTCSHHHHHHHHHHHEE-EEEEEES
T ss_pred eecccccccccchhhhHHHHHHhhCC-CCceECC
Confidence 84 344444 56678888899999 9999873
No 210
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.36 E-value=2.9e-12 Score=110.22 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=73.7
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC----------CCceEEeCCCCchhhhhh-ccCCC
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL----------PNIRYQLTPTMSITELEQ-NVATQ 97 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~-~~~~~ 97 (262)
.++..+|||||||+|..++.+++. ..+|+++|+|+.+++.|+++ +++++..+| +.. ++..+
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D------~~~~l~~~~ 179 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD------GFEFLKNHK 179 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC------HHHHHHHCT
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh------HHHHHHhcC
Confidence 456689999999999999999986 47999999999999999852 346666665 322 22246
Q ss_pred CceeeEEEccccccCCh-----hHHHHHHHHhhcCCCeEEEEEe
Q 037961 98 SSVDLVTIASALHWFDL-----PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d~-----~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++||+|++...-++-.. ..+++++.++|+ |||+|++-.
T Consensus 180 ~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lk-pgG~lv~~~ 222 (314)
T 2b2c_A 180 NEFDVIITDSSDPVGPAESLFGQSYYELLRDALK-EDGILSSQG 222 (314)
T ss_dssp TCEEEEEECCC-------------HHHHHHHHEE-EEEEEEEEC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcC-CCeEEEEEC
Confidence 78999998765443321 578999999999 999999854
No 211
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.35 E-value=3.8e-13 Score=111.60 Aligned_cols=93 Identities=20% Similarity=0.290 Sum_probs=74.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhh-ccC-----C
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQ-NVA-----T 96 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~-~~~-----~ 96 (262)
+..+|||+|||+|..+..++.. +.+|+++|+++.+++.|+++ .+++++.++ +.+ ++. .
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd------a~~~l~~~~~~~~ 133 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP------ALDTLHSLLNEGG 133 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC------HHHHHHHHHHHHC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC------HHHHHHHHhhccC
Confidence 5678999999999999999984 57999999999999877652 478888876 222 111 1
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+++||+|++... .-+...+++++.++|| |||+|++
T Consensus 134 ~~~fD~V~~d~~--~~~~~~~l~~~~~~Lk-pGG~lv~ 168 (242)
T 3r3h_A 134 EHQFDFIFIDAD--KTNYLNYYELALKLVT-PKGLIAI 168 (242)
T ss_dssp SSCEEEEEEESC--GGGHHHHHHHHHHHEE-EEEEEEE
T ss_pred CCCEeEEEEcCC--hHHhHHHHHHHHHhcC-CCeEEEE
Confidence 478999998754 2256678999999999 9999998
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=2.9e-12 Score=104.86 Aligned_cols=100 Identities=21% Similarity=0.376 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCC--CCc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVAT--QSS 99 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~ 99 (262)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++. .++++..++.. .....++.. .++
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~--~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL--ETLDELLAAGEAGT 145 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHHTTCTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH--HHHHHHHhcCCCCC
Confidence 46678999999999999999985 57999999999999998853 46888887610 011112111 168
Q ss_pred eeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 100 VDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 100 ~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
||+|++... .-+...+++++.++|+ |||++++.+
T Consensus 146 ~D~v~~d~~--~~~~~~~l~~~~~~L~-pgG~lv~~~ 179 (229)
T 2avd_A 146 FDVAVVDAD--KENCSAYYERCLQLLR-PGGILAVLR 179 (229)
T ss_dssp EEEEEECSC--STTHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccEEEECCC--HHHHHHHHHHHHHHcC-CCeEEEEEC
Confidence 999998654 2256789999999999 999999843
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.34 E-value=2.3e-12 Score=103.36 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC-CCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL-PNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++ .++++..+| +.+++ ++||+|+++..+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d------~~~~~---~~~D~v~~~~p~ 120 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD------VSEIS---GKYDTWIMNPPF 120 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC------GGGCC---CCEEEEEECCCC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECc------HHHCC---CCeeEEEECCCc
Confidence 3678999999999999999998865 699999999999999864 378888775 44442 689999999999
Q ss_pred ccCCh---hHHHHHHHHhh
Q 037961 110 HWFDL---PQFYKQVKWVL 125 (262)
Q Consensus 110 ~~~d~---~~~l~~~~r~L 125 (262)
||... ..+++++.+++
T Consensus 121 ~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 121 GSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp -------CHHHHHHHHHHE
T ss_pred hhccCchhHHHHHHHHHhc
Confidence 99832 35777777776
No 214
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.34 E-value=4.6e-12 Score=104.72 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=78.0
Q ss_pred HHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCch-hhhh
Q 037961 23 LFKLIASKTPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSI-TELE 91 (262)
Q Consensus 23 ~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~-~~~~ 91 (262)
++..+... .+..+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++ .++++..++.... ....
T Consensus 61 ~l~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~ 139 (237)
T 3c3y_A 61 LMSFVLKL-VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLL 139 (237)
T ss_dssp HHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHh-hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 34444433 45678999999999999999986 67999999999999999752 3578888761100 0010
Q ss_pred hccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 92 QNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
....++++||+|++.. +. +...+++++.++|+ |||++++-
T Consensus 140 ~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~-pGG~lv~d 180 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVK-VGGIVAYD 180 (237)
T ss_dssp HSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEE-EEEEEEEE
T ss_pred hccCCCCCcCEEEECC---chHHHHHHHHHHHHhcC-CCeEEEEe
Confidence 0011257899999863 33 56779999999999 99999883
No 215
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.34 E-value=4.1e-12 Score=107.91 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=78.7
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELE 91 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~ 91 (262)
+.+.+.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. ++++++.+| +.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D------~~ 87 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGD------VL 87 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESC------TT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcc------ee
Confidence 55666776665 3678999999999999999999999999999999999988752 357788765 44
Q ss_pred hccCCCCceeeEEEccccccCChh--HHH--------------HHH--HHhhcCCCeEEE
Q 037961 92 QNVATQSSVDLVTIASALHWFDLP--QFY--------------KQV--KWVLKKPSGVIA 133 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~d~~--~~l--------------~~~--~r~Lk~pgG~l~ 133 (262)
..+++ +||+|+++..++|..+. .++ +|+ +++|+ |||.++
T Consensus 88 ~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlk-PGg~~y 144 (285)
T 1zq9_A 88 KTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAK-PGDKLY 144 (285)
T ss_dssp TSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCC-TTCTTC
T ss_pred cccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcC-CCCccc
Confidence 44333 79999999888876221 122 333 36899 999873
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.33 E-value=4.7e-12 Score=104.28 Aligned_cols=99 Identities=23% Similarity=0.350 Sum_probs=76.1
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCC--Cce
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQ--SSV 100 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~ 100 (262)
+..+|||+|||+|..+..++.. +.+|+++|+|+.+++.|++. .++++..++.. .....++..+ ++|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~--~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL--ATLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH--HHHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH--HHHHHHHhcCCCCCc
Confidence 5678999999999999999986 46999999999999998853 35788877610 1122333333 789
Q ss_pred eeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 101 DLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 101 D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+|++.... -+...+++++.++|+ |||+|++-+
T Consensus 150 D~V~~d~~~--~~~~~~l~~~~~~Lk-pgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADK--RNYPRYYEIGLNLLR-RGGLMVIDN 182 (232)
T ss_dssp EEEEECSCG--GGHHHHHHHHHHTEE-EEEEEEEEC
T ss_pred CEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEeC
Confidence 999976541 256779999999999 999999843
No 217
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.33 E-value=9.9e-13 Score=109.56 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=73.9
Q ss_pred HHHHHHhhCC----CCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhh
Q 037961 23 LFKLIASKTP----KRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITE 89 (262)
Q Consensus 23 ~~~~l~~~~~----~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~ 89 (262)
++..+....+ ++.+|||+|||+|.++..++.. +.+|+|+|+|+.|++.|+++ .++.+..+|
T Consensus 51 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------ 124 (254)
T 2h00_A 51 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP------ 124 (254)
T ss_dssp HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC------
T ss_pred HHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc------
Confidence 3444444443 4678999999999999998875 68999999999999998853 237888776
Q ss_pred hhhc---cCC---CCceeeEEEccccccCC----------------hhHHHHHHHHhhcCCCeEEEEE
Q 037961 90 LEQN---VAT---QSSVDLVTIASALHWFD----------------LPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 90 ~~~~---~~~---~~~~D~V~~~~~~~~~d----------------~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+.+. +++ +++||+|+++..+++.. ...++.++.++|| |||.+.++
T Consensus 125 ~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lk-pgG~l~~~ 191 (254)
T 2h00_A 125 QKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMA-EGGELEFV 191 (254)
T ss_dssp TTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHH-HHTHHHHH
T ss_pred hhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEe-cCCEEEEE
Confidence 2210 223 36899999997776542 1235678999999 99988763
No 218
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.33 E-value=4e-12 Score=104.99 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc--------
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN-------- 93 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~-------- 93 (262)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++ .++.+..++... ....+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE--TLQVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHCSSCCG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH--HHHHHHhhccccc
Confidence 36678999999999999999987 57999999999999998863 237888776100 01111
Q ss_pred ---cCCC--CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 94 ---VATQ--SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 94 ---~~~~--~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+++ ++||+|++..... +...+++++.++|+ |||.|++-.
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~-pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE--NYPNYYPLILKLLK-PGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG--GHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH--HHHHHHHHHHHHcC-CCeEEEEEc
Confidence 1233 7899999874321 56689999999999 999999843
No 219
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=4.7e-12 Score=111.98 Aligned_cols=124 Identities=9% Similarity=0.042 Sum_probs=84.3
Q ss_pred HHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------C--CceEEeCCCCchhhhhhccCC
Q 037961 26 LIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------P--NIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~--~~~~~~~~~~~~~~~~~~~~~ 96 (262)
++.....++.+|||+|||+|.++..++..++ +|+++|+|+.+++.|+++ . +++++.+|... ....+.-.
T Consensus 205 ~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~--~l~~~~~~ 282 (385)
T 2b78_A 205 ELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD--YFKYARRH 282 (385)
T ss_dssp HHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH--HHHHHHHT
T ss_pred HHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH--HHHHHHHh
Confidence 3333325678999999999999999998765 899999999999998852 2 68888877110 01111112
Q ss_pred CCceeeEEEccccc-----cC-C----hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 97 QSSVDLVTIASALH-----WF-D----LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 97 ~~~~D~V~~~~~~~-----~~-d----~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
..+||+|++..... .. + ...++.++.++|+ |||.|++.+.......+.+.+++..
T Consensus 283 ~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 283 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILS-ENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 45899999865442 22 3 3346778899999 9999998665543222344444433
No 220
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.32 E-value=3e-12 Score=116.22 Aligned_cols=102 Identities=24% Similarity=0.214 Sum_probs=77.6
Q ss_pred HHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc
Q 037961 24 FKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 24 ~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~ 93 (262)
.+.+.... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+ |++.|++. .+++++.++ ++++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d------~~~~ 219 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGK------VEEV 219 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESC------TTTC
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECc------hhhC
Confidence 33444433 366899999999999999998875 4999999998 98888752 568888775 4444
Q ss_pred cCCCCceeeEEEccccccC-C--hhHHHHHHHHhhcCCCeEEEE
Q 037961 94 VATQSSVDLVTIASALHWF-D--LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~-d--~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+++ ++||+|+++..+++. + ....+.++.++|| |||.+++
T Consensus 220 ~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lk-pgG~li~ 261 (480)
T 3b3j_A 220 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLK-PSGNMFP 261 (480)
T ss_dssp CCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEE-EEEEEES
T ss_pred ccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcC-CCCEEEE
Confidence 433 589999998775544 3 3457778899999 9999985
No 221
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.31 E-value=5.9e-12 Score=106.87 Aligned_cols=106 Identities=21% Similarity=0.183 Sum_probs=79.7
Q ss_pred HHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC------C-CceEEeCCCCchhhh
Q 037961 21 KELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL------P-NIRYQLTPTMSITEL 90 (262)
Q Consensus 21 ~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~~ 90 (262)
+.+++.+....+ ++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.|+++ . ++.+..+|.
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~------ 182 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF------ 182 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST------
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc------
Confidence 456666665543 5678999999999999999988 78999999999999999853 2 388888772
Q ss_pred hhccCCCCce---eeEEEcccccc----------C----------ChhHHHHHHH-HhhcCCCeEEEEE
Q 037961 91 EQNVATQSSV---DLVTIASALHW----------F----------DLPQFYKQVK-WVLKKPSGVIAAW 135 (262)
Q Consensus 91 ~~~~~~~~~~---D~V~~~~~~~~----------~----------d~~~~l~~~~-r~Lk~pgG~l~i~ 135 (262)
.+. ++ ++| |+|+++..... . |...+++++. +.|+ |||.|++-
T Consensus 183 ~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~-pgG~l~~e 248 (284)
T 1nv8_A 183 LEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT-SGKIVLME 248 (284)
T ss_dssp TGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC-TTCEEEEE
T ss_pred hhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC-CCCEEEEE
Confidence 111 11 468 99999843321 1 1236899999 9999 99999983
No 222
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.30 E-value=1.8e-11 Score=105.44 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 102 (262)
.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++ .++.+..+| +..++..+++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D------~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS------SLHIGELNVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC------GGGGGGGCCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC------hhhcccccccCCE
Confidence 56789999999999999999975 36899999999999988753 467777765 4443333568999
Q ss_pred EEEccc------cccC-------C----------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASA------LHWF-------D----------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~------~~~~-------d----------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++... ++.. . ...+++++.++|| |||+|++.+++
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~stcs 248 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK-PGGILVYSTCS 248 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 998533 2111 1 1478999999999 99999986664
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.29 E-value=9.8e-12 Score=104.93 Aligned_cols=100 Identities=14% Similarity=0.085 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--C-CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccC----CCC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--Y-QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVA----TQS 98 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~----~~~ 98 (262)
.++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++ .++.+..+| +..++. ..+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D------~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINAD------MRKYKDYLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------HHHHHHHHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCC------hHhcchhhhhccc
Confidence 46789999999999999999984 4 7899999999999988753 467888765 333322 256
Q ss_pred ceeeEEEcccccc------------------C-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 99 SVDLVTIASALHW------------------F-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 99 ~~D~V~~~~~~~~------------------~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+||+|++...+.. . ...++++++.++|| |||+|++.+++
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~stcs 213 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLK-KDGELVYSTCS 213 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEECC
Confidence 8999998743321 1 34679999999999 99999986654
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.27 E-value=2.2e-11 Score=107.28 Aligned_cols=96 Identities=13% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhh-ccC-CCCceee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQ-NVA-TQSSVDL 102 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~-~~~-~~~~~D~ 102 (262)
++.+|||+| |+|.++..++..+ .+|+++|+|+.|++.|+++ .+++++.+| +.. ++. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D------~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD------LRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC------TTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh------hhhhchhhccCCccE
Confidence 578999999 9999999998875 4899999999999999863 267888766 333 332 3468999
Q ss_pred EEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 103 VTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 103 V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+++..+++.....+++++.++|| |||+++++.
T Consensus 245 Vi~~~p~~~~~~~~~l~~~~~~Lk-pgG~~~~~~ 277 (373)
T 2qm3_A 245 FITDPPETLEAIRAFVGRGIATLK-GPRCAGYFG 277 (373)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTBC-STTCEEEEE
T ss_pred EEECCCCchHHHHHHHHHHHHHcc-cCCeEEEEE
Confidence 999988776555789999999999 999654433
No 225
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.26 E-value=1.3e-11 Score=102.01 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=85.7
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~ 93 (262)
+.++..+...+++..+|||||||+|.++..++.. ..+|+++|+++.|++.++++ ....+...| ...
T Consensus 120 D~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D------~~~- 192 (281)
T 3lcv_B 120 DEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVAD------LLE- 192 (281)
T ss_dssp HHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECC------TTT-
T ss_pred HHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEee------ecc-
Confidence 6667777777777889999999999999998775 56999999999999998863 345555554 211
Q ss_pred cCCCCceeeEEEccccccCChh---HHHHHHHHhhcCCCeEEEEEec
Q 037961 94 VATQSSVDLVTIASALHWFDLP---QFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~d~~---~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..+.+++|+|+++-++|.++.+ ..+ ++.+.|+ |+|.++-+..
T Consensus 193 ~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~-~~~vvVSfp~ 237 (281)
T 3lcv_B 193 DRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVN-SPNIVVTFPT 237 (281)
T ss_dssp SCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSS-CSEEEEEEEC
T ss_pred cCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhC-CCCEEEeccc
Confidence 1257889999999999999433 255 9999999 9999987665
No 226
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.26 E-value=1.2e-11 Score=109.71 Aligned_cols=109 Identities=15% Similarity=0.118 Sum_probs=82.2
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC------C-CceEEeCCCCchhhhhhc--
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL------P-NIRYQLTPTMSITELEQN-- 93 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~~~~~-- 93 (262)
...+....+++.+|||+|||+|.++..++..++ +|+|+|+|+.+++.|+++ . ++.+..+| +.+.
T Consensus 208 ~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d------~~~~~~ 281 (396)
T 2as0_A 208 RLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS------AFEEME 281 (396)
T ss_dssp HHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC------HHHHHH
T ss_pred HHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECC------HHHHHH
Confidence 334444444778999999999999999999854 899999999999998853 2 67888776 2222
Q ss_pred --cCCCCceeeEEEccccc---------cC-ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 94 --VATQSSVDLVTIASALH---------WF-DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 94 --~~~~~~~D~V~~~~~~~---------~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.-..++||+|++..... +. +...++.++.++|+ |||.|++.++..
T Consensus 282 ~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 338 (396)
T 2as0_A 282 KLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK-DGGILVTCSCSQ 338 (396)
T ss_dssp HHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE-EEEEEEEEECCT
T ss_pred HHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCC
Confidence 11356899999965432 22 45668899999999 999998876654
No 227
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.25 E-value=2.2e-11 Score=99.64 Aligned_cols=106 Identities=12% Similarity=0.038 Sum_probs=82.1
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccC
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~ 95 (262)
+.++..+... ++..+|||||||+|.++..+. ...+|+|+|+|+.|++.+++. .+..+...| ....+
T Consensus 94 d~fY~~i~~~-~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D------~~~~~- 164 (253)
T 3frh_A 94 DTLYDFIFSA-ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQD------VLCAP- 164 (253)
T ss_dssp HHHHHHHTSS-CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECC------TTTSC-
T ss_pred HHHHHHHhcC-CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEee------cccCC-
Confidence 5566666666 677899999999999999988 677999999999999999863 445566554 33333
Q ss_pred CCCceeeEEEccccccC-ChhH-HHHHHHHhhcCCCeEEEEEe
Q 037961 96 TQSSVDLVTIASALHWF-DLPQ-FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 96 ~~~~~D~V~~~~~~~~~-d~~~-~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+++|+|++.-++|.+ +.++ ..-++.+.|+ ++|+++-+.
T Consensus 165 ~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~-~~~vvVsfP 206 (253)
T 3frh_A 165 PAEAGDLALIFKLLPLLEREQAGSAMALLQSLN-TPRMAVSFP 206 (253)
T ss_dssp CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCB-CSEEEEEEE
T ss_pred CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhc-CCCEEEEcC
Confidence 45589999999999999 3222 4448899999 999888755
No 228
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.24 E-value=3.4e-11 Score=104.58 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=79.9
Q ss_pred HHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCC
Q 037961 26 LIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQS 98 (262)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 98 (262)
.+.....++.+|||+|||+|.++.. +..+.+|+|+|+|+.+++.++++ .++.+..+| +.+.. +
T Consensus 188 ~i~~~~~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D------~~~~~---~ 257 (336)
T 2yx1_A 188 RIMKKVSLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSD------VREVD---V 257 (336)
T ss_dssp HHHHHCCTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC------GGGCC---C
T ss_pred HHHHhcCCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC------hHHhc---C
Confidence 4445567888999999999999999 88777999999999999998863 467888775 33332 7
Q ss_pred ceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 99 SVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 99 ~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
+||+|+++.... ...++..+.++|+ |||.+++..+...
T Consensus 258 ~fD~Vi~dpP~~---~~~~l~~~~~~L~-~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 258 KGNRVIMNLPKF---AHKFIDKALDIVE-EGGVIHYYTIGKD 295 (336)
T ss_dssp CEEEEEECCTTT---GGGGHHHHHHHEE-EEEEEEEEEEESS
T ss_pred CCcEEEECCcHh---HHHHHHHHHHHcC-CCCEEEEEEeecC
Confidence 899999874322 2478999999999 9999998665543
No 229
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.24 E-value=1.1e-11 Score=109.59 Aligned_cols=100 Identities=22% Similarity=0.221 Sum_probs=78.4
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc----CCCCceee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV----ATQSSVDL 102 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~----~~~~~~D~ 102 (262)
++.+|||+|||+|.++..++..+.+|+++|+|+.+++.|+++ .++.+..+| +.++. -...+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d------~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEAN------AFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESC------HHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECC------HHHHHHHHHhcCCCeeE
Confidence 678899999999999999998877999999999999998853 457888876 22221 12568999
Q ss_pred EEEcccccc---------C-ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 103 VTIASALHW---------F-DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 103 V~~~~~~~~---------~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
|++...... . +...++.++.++|+ |||.|++.++..
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 328 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLK-EGGILATASCSH 328 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCC
Confidence 998654321 2 34568899999999 999999877653
No 230
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.23 E-value=3.7e-11 Score=106.66 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=80.2
Q ss_pred HHHhhCCCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-------C-CceEEeCCCCchhhhhhccCC
Q 037961 26 LIASKTPKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-------P-NIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~-~~~~~~~~~~~~~~~~~~~~~ 96 (262)
.+... .++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++ . +++++.+|.... ...+...
T Consensus 214 ~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~--~~~~~~~ 290 (396)
T 3c0k_A 214 ATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL--LRTYRDR 290 (396)
T ss_dssp HHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH--HHHHHHT
T ss_pred HHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH--HHHHHhc
Confidence 34333 567899999999999999999986 5899999999999998853 2 577887761000 1111112
Q ss_pred CCceeeEEEcccc---------ccC-ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 97 QSSVDLVTIASAL---------HWF-DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 97 ~~~~D~V~~~~~~---------~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
..+||+|++.... +.. +...++.++.++|+ |||.+++.++..
T Consensus 291 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 342 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLN-EGGILLTFSCSG 342 (396)
T ss_dssp TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCC
Confidence 4689999997543 122 45668999999999 999999866653
No 231
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.22 E-value=3.9e-11 Score=98.00 Aligned_cols=117 Identities=16% Similarity=0.144 Sum_probs=85.3
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 94 (262)
+..+....+++.+|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++ .++++..+|. ++.+
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~-----l~~l- 79 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANG-----LAAF- 79 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG-----GGGC-
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECch-----hhhc-
Confidence 45677788888999999999999999999976 4799999999999999863 3578887761 1223
Q ss_pred CCCC-ceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 95 ATQS-SVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 95 ~~~~-~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
+.+ +||+|+++.+-. --...++.++.+.|+ |+|+|++-.... .+.+++.+.+
T Consensus 80 -~~~~~~D~IviaG~Gg-~~i~~Il~~~~~~L~-~~~~lVlq~~~~---~~~vr~~L~~ 132 (225)
T 3kr9_A 80 -EETDQVSVITIAGMGG-RLIARILEEGLGKLA-NVERLILQPNNR---EDDLRIWLQD 132 (225)
T ss_dssp -CGGGCCCEEEEEEECH-HHHHHHHHHTGGGCT-TCCEEEEEESSC---HHHHHHHHHH
T ss_pred -ccCcCCCEEEEcCCCh-HHHHHHHHHHHHHhC-CCCEEEEECCCC---HHHHHHHHHH
Confidence 323 699998654311 114568889999999 999999855422 2445555444
No 232
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.22 E-value=3.7e-11 Score=98.33 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=85.2
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 94 (262)
+..+..+.+++.+|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++ .++++..+| ..+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD------~l~~~ 85 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLAN------GLSAF 85 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECS------GGGGC
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECc------hhhcc
Confidence 55677888889999999999999999999976 3799999999999999863 358888876 22222
Q ss_pred CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 95 ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
.+..+||+|+++..-- --...++.+..+.|+ ++|.|++..... ...+++.+.+
T Consensus 86 ~~~~~~D~IviaGmGg-~lI~~IL~~~~~~l~-~~~~lIlqp~~~---~~~lr~~L~~ 138 (230)
T 3lec_A 86 EEADNIDTITICGMGG-RLIADILNNDIDKLQ-HVKTLVLQPNNR---EDDLRKWLAA 138 (230)
T ss_dssp CGGGCCCEEEEEEECH-HHHHHHHHHTGGGGT-TCCEEEEEESSC---HHHHHHHHHH
T ss_pred ccccccCEEEEeCCch-HHHHHHHHHHHHHhC-cCCEEEEECCCC---hHHHHHHHHH
Confidence 2333799988643321 113457888888999 999999866432 2444554444
No 233
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.22 E-value=2.4e-11 Score=103.86 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=64.6
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~ 92 (262)
+.+.+.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. ++++++.+| +..
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D------~~~ 101 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGD------AIK 101 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----------CCS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECc------hhh
Confidence 45566665554 4678999999999999999999999999999999999988752 466776654 444
Q ss_pred ccCCCCceeeEEEccccccCC
Q 037961 93 NVATQSSVDLVTIASALHWFD 113 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~d 113 (262)
.+ .++||+|+++...+|..
T Consensus 102 ~~--~~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 102 TV--FPKFDVCTANIPYKISS 120 (299)
T ss_dssp SC--CCCCSEEEEECCGGGHH
T ss_pred CC--cccCCEEEEcCCccccc
Confidence 43 34799999999888763
No 234
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.21 E-value=5.1e-11 Score=100.42 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=81.1
Q ss_pred HHHHhhCCCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCC
Q 037961 25 KLIASKTPKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 25 ~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~ 96 (262)
..+....+++.+|||+|||+|.++..++..+ ++|+++|+||.+++.++++ ..+.+..+| +.+++ .
T Consensus 117 ~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D------~~~~~-~ 189 (278)
T 3k6r_A 117 VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD------NRDFP-G 189 (278)
T ss_dssp HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------TTTCC-C
T ss_pred HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc------HHHhc-c
Confidence 3566777899999999999999999999987 5899999999999998853 346777665 33333 4
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+.||.|+++... ....++..+.++|| |||+|.++..
T Consensus 190 ~~~~D~Vi~~~p~---~~~~~l~~a~~~lk-~gG~ih~~~~ 226 (278)
T 3k6r_A 190 ENIADRILMGYVV---RTHEFIPKALSIAK-DGAIIHYHNT 226 (278)
T ss_dssp CSCEEEEEECCCS---SGGGGHHHHHHHEE-EEEEEEEEEE
T ss_pred ccCCCEEEECCCC---cHHHHHHHHHHHcC-CCCEEEEEee
Confidence 6789999977442 34568889999999 9999987554
No 235
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.21 E-value=4.1e-11 Score=98.87 Aligned_cols=118 Identities=12% Similarity=0.008 Sum_probs=84.6
Q ss_pred HHHHHhhCCCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhcc
Q 037961 24 FKLIASKTPKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 94 (262)
+..+....+++.+|||||||+|.++..++..+ .+|+|+|+++.+++.|+++ .++++..+| ..+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD------~l~~~ 85 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGN------GLAVI 85 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECS------GGGGC
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecc------hhhcc
Confidence 56677888899999999999999999999976 3799999999999999863 347888776 22222
Q ss_pred CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcc
Q 037961 95 ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKP 152 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~ 152 (262)
.+..+||+|+++.+-- --....+.+..+.|+ ++|.|++..... .+.+++.+.+
T Consensus 86 ~~~~~~D~IviagmGg-~lI~~IL~~~~~~L~-~~~~lIlq~~~~---~~~lr~~L~~ 138 (244)
T 3gnl_A 86 EKKDAIDTIVIAGMGG-TLIRTILEEGAAKLA-GVTKLILQPNIA---AWQLREWSEQ 138 (244)
T ss_dssp CGGGCCCEEEEEEECH-HHHHHHHHHTGGGGT-TCCEEEEEESSC---HHHHHHHHHH
T ss_pred CccccccEEEEeCCch-HHHHHHHHHHHHHhC-CCCEEEEEcCCC---hHHHHHHHHH
Confidence 2233599988643311 013457888889999 999999865432 2444444443
No 236
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.20 E-value=3e-13 Score=112.36 Aligned_cols=107 Identities=11% Similarity=0.143 Sum_probs=79.2
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhcc
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+.+.+.+.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. .+++++.+| +.+++
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D------~~~~~ 88 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQD------ILQFQ 88 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSC------CTTTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECC------hhhcC
Confidence 34455565554 3677899999999999999999999999999999999988764 356666554 55555
Q ss_pred CC-CCceeeEEEccccc------------cCChhHHH----HHHHHhhcCCCeEEEEE
Q 037961 95 AT-QSSVDLVTIASALH------------WFDLPQFY----KQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 95 ~~-~~~~D~V~~~~~~~------------~~d~~~~l----~~~~r~Lk~pgG~l~i~ 135 (262)
++ +++| .|+++...+ +.+...++ +.+.|+|+ |||.+.+.
T Consensus 89 ~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~-~~G~l~v~ 144 (245)
T 1yub_A 89 FPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLD-IHRTLGLL 144 (245)
T ss_dssp CCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHC-GGGSHHHH
T ss_pred cccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhC-CCCchhhh
Confidence 55 3678 677764332 22444555 77999999 99988773
No 237
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.20 E-value=3.6e-11 Score=99.78 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=65.9
Q ss_pred hHHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhc
Q 037961 20 PKELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 20 p~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~ 93 (262)
.+.+.+.+..... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. ++++++.+| +..+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D------~~~~ 88 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKD------ILQF 88 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCC------GGGC
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEECh------HHhC
Confidence 4677778877663 678999999999999999999999999999999999998853 467777765 5556
Q ss_pred cCCC-CceeeEEEcccccc
Q 037961 94 VATQ-SSVDLVTIASALHW 111 (262)
Q Consensus 94 ~~~~-~~~D~V~~~~~~~~ 111 (262)
++++ ..| .|+++...++
T Consensus 89 ~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 89 KFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CCCSSCCC-EEEEECCGGG
T ss_pred CcccCCCe-EEEEeCCccc
Confidence 5553 445 5667655543
No 238
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.20 E-value=1.9e-10 Score=100.57 Aligned_cols=96 Identities=22% Similarity=0.275 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC--eEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ--HVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
++..+|+|||||+|.++..+++++. +++..|. |.+++.|++. .+++++.+| +-..+ ...+|+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD------~~~~~--~~~~D~~ 248 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGD------FFKDP--LPEADLY 248 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESC------TTTSC--CCCCSEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCc------cccCC--CCCceEE
Confidence 3567899999999999999999754 6777887 7899988752 578888876 32222 3357999
Q ss_pred EEccccccC-Ch--hHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWF-DL--PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~-d~--~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
++..++|.. |. .+++++++++|+ |||+++|...
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~-pgg~lli~e~ 284 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCK-PGGGILVIES 284 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCC-TTCEEEEEEC
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCC-CCCEEEEEEe
Confidence 999999976 44 357999999999 9999998654
No 239
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.19 E-value=5.2e-11 Score=101.29 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=71.0
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhcc
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+.+.+.+.... .++.+|||||||+|.+|..+++.+.+|+|+|+++.|++.+++. ++++++.+| +..++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD------~l~~~ 109 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGD------ALKVD 109 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESC------TTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECc------hhhCC
Confidence 56677777665 4678999999999999999999999999999999999998753 688888876 44445
Q ss_pred CCCCceeeEEEccccccC
Q 037961 95 ATQSSVDLVTIASALHWF 112 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~ 112 (262)
+++.+||.|+++...++.
T Consensus 110 ~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 110 LNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp GGGSCCSEEEEECCGGGH
T ss_pred cccCCccEEEEeCccccc
Confidence 556679999999887764
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.18 E-value=5.2e-11 Score=112.78 Aligned_cols=100 Identities=17% Similarity=0.093 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcC--------CCceEEeCCCCchhhhhh-ccCCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKL--------PNIRYQLTPTMSITELEQ-NVATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~D 101 (262)
.++.+|||+|||+|.++..++..++ +|+++|+|+.+++.|+++ .+++++++| +.+ ++...++||
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D------~~~~l~~~~~~fD 611 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD------CLAWLREANEQFD 611 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESC------HHHHHHHCCCCEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecC------HHHHHHhcCCCcc
Confidence 4678899999999999999998876 599999999999999863 257888876 222 222457899
Q ss_pred eEEEcccc-----------ccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 102 LVTIASAL-----------HWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 102 ~V~~~~~~-----------~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+|++.... +.. +...++.++.++|+ |||.|++.+..
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk-pgG~L~~s~~~ 659 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR-AGGTIMFSNNK 659 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECC
Confidence 99986542 333 55668999999999 99999975544
No 241
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.18 E-value=1.3e-10 Score=93.53 Aligned_cols=84 Identities=13% Similarity=0.130 Sum_probs=67.6
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-eEEEEcCCHHHHHHHhcCC-----CceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-HVIATDTSPKQLKFAIKLP-----NIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++. ++.+..+| +.+++ ++||+|+++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d------~~~~~---~~~D~v~~~ 119 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGD------VSEFN---SRVDIVIMN 119 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESC------GGGCC---CCCSEEEEC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECc------hHHcC---CCCCEEEEc
Confidence 678999999999999999998865 7999999999999998631 57777765 44432 489999999
Q ss_pred cccccCC---hhHHHHHHHHhh
Q 037961 107 SALHWFD---LPQFYKQVKWVL 125 (262)
Q Consensus 107 ~~~~~~d---~~~~l~~~~r~L 125 (262)
..+|+.. ...+++++.++|
T Consensus 120 ~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 120 PPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCCccccCCchHHHHHHHHHhc
Confidence 9998873 235777888776
No 242
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.16 E-value=8.3e-11 Score=103.57 Aligned_cols=101 Identities=17% Similarity=0.093 Sum_probs=75.8
Q ss_pred hHHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhhCC--eEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhh
Q 037961 20 PKELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQIYQ--HVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITE 89 (262)
Q Consensus 20 p~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~ 89 (262)
++.+...+... .+++..|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++ .++.+.++|
T Consensus 203 ~~~la~~l~~~~~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D------ 276 (373)
T 3tm4_A 203 KASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGD------ 276 (373)
T ss_dssp CHHHHHHHHHHHTCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECC------
T ss_pred cHHHHHHHHHhhcCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC------
Confidence 45555444333 45678899999999999999999876 999999999999999863 367888765
Q ss_pred hhhccCCCCceeeEEEccccccC--C---h----hHHHHHHHHhhc
Q 037961 90 LEQNVATQSSVDLVTIASALHWF--D---L----PQFYKQVKWVLK 126 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~--d---~----~~~l~~~~r~Lk 126 (262)
+.+++.++++||+|+++..++.- + . ..+++++.++|.
T Consensus 277 ~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~ 322 (373)
T 3tm4_A 277 ATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLE 322 (373)
T ss_dssp GGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEE
T ss_pred hhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcC
Confidence 66666677899999998776532 1 1 456777777774
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.15 E-value=1.1e-10 Score=104.16 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=83.2
Q ss_pred hHHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhcc
Q 037961 20 PKELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 20 p~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 94 (262)
|+.+.+.+..... +..+|||+|||+|.++..++++ ..+++|+|+++.+++.| .++.+..+| +..+.
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D------~~~~~ 94 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILAD------FLLWE 94 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESC------GGGCC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCC------hhhcC
Confidence 6888888888764 4679999999999999999875 47999999999998877 467888766 33332
Q ss_pred CCCCceeeEEEccccccC-C---------h--------------------hHHHHHHHHhhcCCCeEEEEEec
Q 037961 95 ATQSSVDLVTIASALHWF-D---------L--------------------PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~-d---------~--------------------~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+.++||+|+++..+... . . ..+++.+.++|+ |||.+++...
T Consensus 95 -~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~~G~~~~i~p 165 (421)
T 2ih2_A 95 -PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK-PGGVLVFVVP 165 (421)
T ss_dssp -CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred -ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC-CCCEEEEEEC
Confidence 35689999998665432 1 1 146889999999 9999998554
No 244
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.14 E-value=2.3e-10 Score=103.13 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--C-CeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc--CCCCce
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--Y-QHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV--ATQSSV 100 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~ 100 (262)
.++.+|||+|||+|..+..++.. + .+|+++|+|+.+++.++++ .++.+..+| +...+ +++++|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D------~~~~~~~~~~~~f 331 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKD------ARKAPEIIGEEVA 331 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC------TTCCSSSSCSSCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcC------hhhcchhhccCCC
Confidence 56789999999999999999985 3 6899999999999988753 467777665 33333 345789
Q ss_pred eeEEEcc------ccccC-Ch----------------hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 101 DLVTIAS------ALHWF-DL----------------PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 101 D~V~~~~------~~~~~-d~----------------~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|+|++.. .++.. |. ..+++++.++|| |||+|++.+++
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~lvy~tcs 391 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVK-PGGRLLYTTCS 391 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 9999732 22211 11 468999999999 99999987665
No 245
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.13 E-value=1.9e-10 Score=104.28 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=74.9
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccC-CCCceee
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVA-TQSSVDL 102 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~D~ 102 (262)
++.+|||+|||+|..|..++.. ..+|+++|+|+.+++.++++ .++.+..+| +..++. .+++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D------~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFD------GRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCC------STTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC------HHHhhhhccccCCE
Confidence 7789999999999999999986 36899999999999988753 467777765 333221 3568999
Q ss_pred EEEccc------cc--------cCC---------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASA------LH--------WFD---------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~------~~--------~~d---------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++.-. ++ |-. ..++++++.++|| |||+|++.+++
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~LvysTcs 248 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR-PGGTLVYSTCT 248 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeccc
Confidence 998422 11 110 2357899999999 99999986665
No 246
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=3.9e-10 Score=100.79 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=75.3
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccCC
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~ 96 (262)
.+++.+.. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+++ ..+++..+| +.++. +
T Consensus 280 ~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d------~~~~~-~ 351 (425)
T 2jjq_A 280 NLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVAS------DREVS-V 351 (425)
T ss_dssp HHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECC------TTTCC-C
T ss_pred HHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECC------hHHcC-c
Confidence 44555555 56778999999999999999999999999999999999999853 127788765 33332 2
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
. +||+|+++....-. ...+++.+. .|+ |||.+++.+
T Consensus 352 ~-~fD~Vv~dPPr~g~-~~~~~~~l~-~l~-p~givyvsc 387 (425)
T 2jjq_A 352 K-GFDTVIVDPPRAGL-HPRLVKRLN-REK-PGVIVYVSC 387 (425)
T ss_dssp T-TCSEEEECCCTTCS-CHHHHHHHH-HHC-CSEEEEEES
T ss_pred c-CCCEEEEcCCccch-HHHHHHHHH-hcC-CCcEEEEEC
Confidence 2 89999987653221 123555554 589 999988844
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.12 E-value=2.3e-10 Score=96.94 Aligned_cols=105 Identities=14% Similarity=0.063 Sum_probs=72.9
Q ss_pred CCCCCeEEEEcC------cccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcCCCceE-EeCCCCchhhhhhccCCCCce
Q 037961 31 TPKRNLAWDVGT------RSGQAAASLAQI---YQHVIATDTSPKQLKFAIKLPNIRY-QLTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 31 ~~~~~~vlDvGc------G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 100 (262)
.+++.+|||+|| |+|. ..+++. ..+|+|+|+|+. .+++++ +++| +.+.++ .++|
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v~~v~~~i~gD------~~~~~~-~~~f 124 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------VSDADSTLIGD------CATVHT-ANKW 124 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------BCSSSEEEESC------GGGCCC-SSCE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------CCCCEEEEECc------cccCCc-cCcc
Confidence 357889999999 5576 333433 478999999988 247888 8765 545443 3689
Q ss_pred eeEEEccccccC-----C-------hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhccc
Q 037961 101 DLVTIASALHWF-----D-------LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKPF 153 (262)
Q Consensus 101 D~V~~~~~~~~~-----d-------~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~~ 153 (262)
|+|+++...++. + ...+++++.++|| |||.|++..+..... .++.+++.++
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~~~~-~~l~~~l~~~ 187 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSWN-ADLYKLMGHF 187 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSCC-HHHHHHHTTE
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcC-CCcEEEEEEeccCCH-HHHHHHHHHc
Confidence 999997654431 1 2368999999999 999999855443332 4555565554
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.10 E-value=3.8e-10 Score=101.26 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=78.1
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhc
Q 037961 22 ELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 22 ~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~ 93 (262)
.+++.+.+.. .++.+|||+|||+|.++..++..+.+|+|+|+|+.+++.|+++ .++.+..+|... ....+
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~--~l~~~ 350 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE--DVTKQ 350 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS--CCSSS
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH--Hhhhh
Confidence 4555555544 3667899999999999999999999999999999999998853 478888887111 11123
Q ss_pred cCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 94 VATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
++++++||+|+++..-... ..+++.+.+ ++ |++.+++.
T Consensus 351 ~~~~~~fD~Vv~dPPr~g~--~~~~~~l~~-~~-p~~ivyvs 388 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAGA--AGVMQQIIK-LE-PIRIVYVS 388 (433)
T ss_dssp GGGTTCCSEEEECCCTTCC--HHHHHHHHH-HC-CSEEEEEE
T ss_pred hhhcCCCCEEEECCCCccH--HHHHHHHHh-cC-CCeEEEEE
Confidence 3456789999987665443 245555544 68 88887773
No 249
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=3.1e-10 Score=98.80 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=75.7
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC-------CeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhccCCCCce
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY-------QHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNVATQSSV 100 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~-------~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (262)
++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+.+ .++.+..+|.+ . +...++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l------~-~~~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGL------A-NLLVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTT------S-CCCCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCC------C-ccccCCc
Confidence 56789999999999999988753 6899999999999998752 25677776621 1 1245789
Q ss_pred eeEEEccccccC-Chh------------------HHHHHHHHhhcCCCeEEEEEe
Q 037961 101 DLVTIASALHWF-DLP------------------QFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 101 D~V~~~~~~~~~-d~~------------------~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+|+++..+++. +.+ .+++++.+.|+ |||++++..
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk-~gG~~~~v~ 256 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTK-PGGYLFFLV 256 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 999999998765 221 47999999999 999999855
No 250
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.08 E-value=2.7e-10 Score=102.13 Aligned_cols=100 Identities=12% Similarity=0.134 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC--CeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhcc--CCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY--QHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNV--ATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~D~ 102 (262)
.++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.++++ .++.+..+| +...+ +++++||+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D------~~~~~~~~~~~~fD~ 318 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD------GRYPSQWCGEQQFDR 318 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC------TTCTHHHHTTCCEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCc------hhhchhhcccCCCCE
Confidence 467899999999999999999875 6999999999999988753 246777665 22222 34578999
Q ss_pred EEEcccc------ccC-Ch----------------hHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASAL------HWF-DL----------------PQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~~------~~~-d~----------------~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++...+ +.. +. ..+++++.++|| |||+|++.+++
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk-pGG~lvystcs 376 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK-TGGTLVYATCS 376 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE-EEEEEEEEESC
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 9974322 111 11 367999999999 99999986655
No 251
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.05 E-value=7.5e-10 Score=97.28 Aligned_cols=121 Identities=8% Similarity=0.075 Sum_probs=84.0
Q ss_pred HHHHHHHHhhCC-CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASKTP-KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~ 93 (262)
+.+++.+.+... .+..|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++ .++++..+|.... ...+
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~--~~~~ 277 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEF--TQAM 277 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHH--HHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHH--HHHH
Confidence 566777766654 357899999999999999999888999999999999998752 4788888762110 0111
Q ss_pred c------------CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHh
Q 037961 94 V------------ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAV 149 (262)
Q Consensus 94 ~------------~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~ 149 (262)
. +.+.+||+|++...-. .+..++.++|+ ++|.++...++...+.+.+..+
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~~~~~l~-~~g~ivyvsc~p~t~ard~~~l 339 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSETEKMVQ-AYPRILYISCNPETLCKNLETL 339 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHHHHHHHT-TSSEEEEEESCHHHHHHHHHHH
T ss_pred hhccccccccccccccCCCCEEEECcCcc-----ccHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHH
Confidence 1 0113799998643211 24577889999 8999888776654444444433
No 252
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.05 E-value=3.4e-10 Score=101.85 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCchhhhhhcc-CCCCceee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSITELEQNV-ATQSSVDL 102 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~D~ 102 (262)
.++.+|||+|||+|..|..+++. ..+|+++|+|+.+++.++++ ..+.+..+| +..++ ..+++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~D------a~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAP------PRALAEAFGTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSC------HHHHHHHHCSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECC------HHHhhhhccccCCE
Confidence 46789999999999999999975 25899999999999998753 126777655 33332 13578999
Q ss_pred EEEcccc------c--------cC--C-------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 103 VTIASAL------H--------WF--D-------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 103 V~~~~~~------~--------~~--d-------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|++.-.. + |- + ...+++++.++|| |||+|+..+++
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvysTCs 231 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG-PGGVLVYSTCT 231 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEecc
Confidence 9973322 1 11 0 1558999999999 99999986665
No 253
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.04 E-value=4.7e-10 Score=100.83 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhcc-CCCCcee
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNV-ATQSSVD 101 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~D 101 (262)
.++.+|||+|||+|..|..++.. ..+|+++|+|+.+++.++++ .++.+..+| +..++ ..+++||
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~D------a~~l~~~~~~~FD 177 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHA------PAELVPHFSGFFD 177 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCC------HHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCC------HHHhhhhccccCC
Confidence 56789999999999999999875 35899999999999988752 467777665 33332 1357899
Q ss_pred eEEEcccc---c-----------cC-C--------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 102 LVTIASAL---H-----------WF-D--------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 102 ~V~~~~~~---~-----------~~-d--------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+|++.-.+ . |- + ...++.++.++|| |||+|+..+++
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvYsTCs 236 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK-NKGQLIYSTCT 236 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEESC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEee
Confidence 99985432 1 11 1 1257899999999 99999986665
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=6e-10 Score=92.92 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=63.5
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhcc
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~ 94 (262)
+.+.+.+.... .++.+|||+|||+|.+|..+++.+.+|+|+|+++.|++.+++. ++++++.+| +..++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D------~~~~~ 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQND------ALQFD 88 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESC------TTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcc------hHhCC
Confidence 45566666554 4678999999999999999999999999999999999998753 678899887 22222
Q ss_pred C----CCCceeeEEEccccc
Q 037961 95 A----TQSSVDLVTIASALH 110 (262)
Q Consensus 95 ~----~~~~~D~V~~~~~~~ 110 (262)
+ ..++|| |+++...+
T Consensus 89 ~~~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 89 FSSVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp GGGSCCSSCEE-EEEECCHH
T ss_pred HHHhccCCCeE-EEecCCcc
Confidence 2 245788 77776543
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.00 E-value=7e-10 Score=96.21 Aligned_cols=100 Identities=11% Similarity=0.008 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC-C-------------CceEEeCCCCchhhhhhccC-
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL-P-------------NIRYQLTPTMSITELEQNVA- 95 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-~-------------~~~~~~~~~~~~~~~~~~~~- 95 (262)
+++.+||+||||+|.+++.+++++ .+|++||+++.+++.|+++ + +++++.+| +..+.-
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D------a~~~L~~ 260 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED------CIPVLKR 260 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC------HHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc------HHHHHHh
Confidence 567899999999999999998875 5899999999999999863 1 46777766 222110
Q ss_pred ---CCCceeeEEEcccc-cc------CChhHHHHHH----HHhhcCCCeEEEEEecC
Q 037961 96 ---TQSSVDLVTIASAL-HW------FDLPQFYKQV----KWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 96 ---~~~~~D~V~~~~~~-~~------~d~~~~l~~~----~r~Lk~pgG~l~i~~~~ 138 (262)
..++||+|++...- .. +-...+++.+ .++|+ |||.+++...+
T Consensus 261 ~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~-pgGilv~qs~s 316 (364)
T 2qfm_A 261 YAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQGNC 316 (364)
T ss_dssp HHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEEEEE
T ss_pred hhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCC-CCcEEEEEcCC
Confidence 25789999987543 21 1224567777 89999 99999996644
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.00 E-value=7.5e-10 Score=93.04 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=65.8
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC---CCceEEeCCCCchhhhhhccC
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL---PNIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~ 95 (262)
+.+.+.|.... .++ +|||+|||+|.+|..+++.+.+|+|+|+|+.|++.+++. .+++++.+| +..+++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D------~l~~~~ 105 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQD------ALLYPW 105 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESC------GGGSCG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECC------hhhCCh
Confidence 45566666653 456 999999999999999999999999999999999999863 468888876 444333
Q ss_pred CC-CceeeEEEccccccC
Q 037961 96 TQ-SSVDLVTIASALHWF 112 (262)
Q Consensus 96 ~~-~~~D~V~~~~~~~~~ 112 (262)
++ ..+|.|+++...+..
T Consensus 106 ~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 106 EEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GGSCTTEEEEEEECSSCC
T ss_pred hhccCccEEEecCccccc
Confidence 32 268999998876653
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.96 E-value=2.2e-09 Score=96.58 Aligned_cols=110 Identities=13% Similarity=0.111 Sum_probs=83.1
Q ss_pred hHHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh---------------CCeEEEEcCCHHHHHHHhcC------C-
Q 037961 20 PKELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI---------------YQHVIATDTSPKQLKFAIKL------P- 75 (262)
Q Consensus 20 p~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~~------~- 75 (262)
|..+.+.+..... ++.+|||.|||+|.++..+++. ..+++|+|+++.+++.|+.+ .
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 7888888777653 4568999999999999888764 36799999999999988742 1
Q ss_pred -CceEEeCCCCchhhhhhccCCCCceeeEEEccccccC---Ch---------------hHHHHHHHHhhcCCCeEEEEEe
Q 037961 76 -NIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF---DL---------------PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~---d~---------------~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++.+..+|. ...+ ...+||+|+++..++.. +. ..+++.+.++|| |||++++..
T Consensus 236 ~~~~i~~gD~------l~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~gG~~a~V~ 307 (445)
T 2okc_A 236 DRSPIVCEDS------LEKE-PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK-TGGRAAVVL 307 (445)
T ss_dssp SCCSEEECCT------TTSC-CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCCCEeeCCC------CCCc-ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc-cCCEEEEEE
Confidence 566777662 1222 23489999999887643 21 268999999999 999999855
Q ss_pred c
Q 037961 137 Y 137 (262)
Q Consensus 137 ~ 137 (262)
.
T Consensus 308 p 308 (445)
T 2okc_A 308 P 308 (445)
T ss_dssp E
T ss_pred C
Confidence 3
No 258
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.92 E-value=1.8e-09 Score=89.62 Aligned_cols=111 Identities=10% Similarity=-0.077 Sum_probs=73.7
Q ss_pred HHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~ 93 (262)
-+|.+..... +.+..+|||||||+|.+++.++.. + .++.|+|++-++....... .++.....+ ++..
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~------~dv~ 134 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDK------TDIH 134 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECS------CCTT
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEecc------ceeh
Confidence 3444444442 357789999999999999988765 3 4788999985541111111 133434332 2223
Q ss_pred cCCCCceeeEEEccccc----cCChhH---HHHHHHHhhcCCC-eEEEEEecC
Q 037961 94 VATQSSVDLVTIASALH----WFDLPQ---FYKQVKWVLKKPS-GVIAAWTYT 138 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~----~~d~~~---~l~~~~r~Lk~pg-G~l~i~~~~ 138 (262)
.+++++||+|+|..+.+ |.|... +++.+.++|+ || |.|++=.+.
T Consensus 135 ~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~Lk-pG~G~FV~KVf~ 186 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLA-CGVDNFCVKVLA 186 (277)
T ss_dssp TSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESC
T ss_pred hcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhC-CCCCeEEEEecC
Confidence 45678899999988777 665444 4688899999 99 999984444
No 259
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.91 E-value=8.3e-09 Score=91.26 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=81.1
Q ss_pred hHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC----------------------------------------Ce
Q 037961 20 PKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY----------------------------------------QH 57 (262)
Q Consensus 20 p~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~----------------------------------------~~ 57 (262)
.+.+...++... .++..+||.+||+|.++..++..+ .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 456666666554 366789999999999998877643 34
Q ss_pred EEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc-C----ChhHHHHHHHHhh
Q 037961 58 VIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW-F----DLPQFYKQVKWVL 125 (262)
Q Consensus 58 v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~-~----d~~~~l~~~~r~L 125 (262)
|+|+|+|+.|++.|+++ ..+.+.++| +.+++. ..+||+|+++..+.- + +...+++++.++|
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D------~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQ------VADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCSEEEECC------GGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECC------hHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 99999999999999863 247788765 555543 358999999977642 2 2344677777888
Q ss_pred cCC--CeEEEEEecC
Q 037961 126 KKP--SGVIAAWTYT 138 (262)
Q Consensus 126 k~p--gG~l~i~~~~ 138 (262)
| + ||.+++.+..
T Consensus 339 k-~~~g~~~~iit~~ 352 (393)
T 3k0b_A 339 K-RMPTWSVYVLTSY 352 (393)
T ss_dssp H-TCTTCEEEEEECC
T ss_pred h-cCCCCEEEEEECC
Confidence 7 6 9988886643
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.90 E-value=6.5e-09 Score=91.76 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=82.5
Q ss_pred hHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC----------------------------------------Ce
Q 037961 20 PKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY----------------------------------------QH 57 (262)
Q Consensus 20 p~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~----------------------------------------~~ 57 (262)
.+.+...|+... .++..+||.+||+|.++..++..+ .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 456666666655 366889999999999999887653 46
Q ss_pred EEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-----ChhHHHHHHHHhh
Q 037961 58 VIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-----DLPQFYKQVKWVL 125 (262)
Q Consensus 58 v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-----d~~~~l~~~~r~L 125 (262)
|+|+|+++.|++.|+++ ..+.+.++| +.+++. +.+||+|+++..+.-- +...+++++.++|
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D------~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~l 332 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGD------ATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAF 332 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECC------GGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECC------hhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHH
Confidence 99999999999999863 257777765 445543 4589999999887522 3445788888888
Q ss_pred cCC--CeEEEEEecC
Q 037961 126 KKP--SGVIAAWTYT 138 (262)
Q Consensus 126 k~p--gG~l~i~~~~ 138 (262)
| + ||.+.+.+..
T Consensus 333 k-~~~g~~~~iit~~ 346 (385)
T 3ldu_A 333 R-KLKNWSYYLITSY 346 (385)
T ss_dssp H-TSBSCEEEEEESC
T ss_pred h-hCCCCEEEEEECC
Confidence 8 6 8888886543
No 261
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.89 E-value=1.4e-09 Score=90.91 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCH-------HHHHHHhcC-------CCceEEeCCCCchhhhhhc-c-C
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSP-------KQLKFAIKL-------PNIRYQLTPTMSITELEQN-V-A 95 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~-------~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~-~-~ 95 (262)
+++.+|||+|||+|..+..++..+.+|+++|+|+ .+++.|+++ .+++++.+| +.+. + +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d------~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGN------AAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESC------HHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECC------HHHHHHhh
Confidence 3567899999999999999999999999999999 999988754 348888876 2221 1 2
Q ss_pred CC--CceeeEEEccccccC
Q 037961 96 TQ--SSVDLVTIASALHWF 112 (262)
Q Consensus 96 ~~--~~~D~V~~~~~~~~~ 112 (262)
++ ++||+|+++..+++.
T Consensus 156 ~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHCCCSEEEECCCC---
T ss_pred hccCCCccEEEECCCCCCc
Confidence 33 689999998877664
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.87 E-value=7.5e-09 Score=90.02 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh------------C------CeEEEEcCCHHHHHHHhcC-CC------ceEEeCCCCc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI------------Y------QHVIATDTSPKQLKFAIKL-PN------IRYQLTPTMS 86 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~------------~------~~v~~vD~s~~~~~~a~~~-~~------~~~~~~~~~~ 86 (262)
+...+|+|+||++|..|..+... + .+|+..|+.......+-+. +. -.|..+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gv--- 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGV--- 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEE---
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEec---
Confidence 34467899999999888765432 1 3688999999998877653 32 2333332
Q ss_pred hhhhhhccCCCCceeeEEEccccccC-ChhH---------------------------------HHHHHHHhhcCCCeEE
Q 037961 87 ITELEQNVATQSSVDLVTIASALHWF-DLPQ---------------------------------FYKQVKWVLKKPSGVI 132 (262)
Q Consensus 87 ~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~---------------------------------~l~~~~r~Lk~pgG~l 132 (262)
-+.+....++++++|+|+++.++||+ +.+. +|+..++.|+ |||.+
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~-pGG~m 205 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV-PGGRM 205 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC-TTCEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceE
Confidence 13355566899999999999999999 4221 2778899999 99999
Q ss_pred EEEec
Q 037961 133 AAWTY 137 (262)
Q Consensus 133 ~i~~~ 137 (262)
++...
T Consensus 206 vl~~~ 210 (359)
T 1m6e_X 206 VLTIL 210 (359)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98444
No 263
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.87 E-value=2.2e-08 Score=84.56 Aligned_cols=114 Identities=12% Similarity=0.186 Sum_probs=84.9
Q ss_pred ChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----------CCceEEeCCCC
Q 037961 19 YPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----------PNIRYQLTPTM 85 (262)
Q Consensus 19 yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (262)
|.+.+...-+...+...+||=||-|.|..++.++++ ..+|+.||+++.+++.+++. +++++..+|..
T Consensus 69 YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 69 YHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp HHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred HHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 444455444445677889999999999999999986 46899999999999998752 67888888721
Q ss_pred chhhhhhccCCCCceeeEEEccccc-----cCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 86 SITELEQNVATQSSVDLVTIASALH-----WFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 86 ~~~~~~~~~~~~~~~D~V~~~~~~~-----~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.+.-..++||+|+....=. .+-...+++.+.+.|+ |||+++.+.-+
T Consensus 149 -----~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~-p~Gv~v~q~~s 200 (294)
T 3o4f_A 149 -----NFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNGV 200 (294)
T ss_dssp -----TTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEE-EEEEEEEEEEE
T ss_pred -----HHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhC-CCCEEEEecCC
Confidence 11223467899999754321 1224569999999999 99999996543
No 264
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.86 E-value=6.4e-09 Score=91.18 Aligned_cols=101 Identities=15% Similarity=0.081 Sum_probs=71.7
Q ss_pred CCeEEEEcCcccHhHHHHHhh-------------------CCeEEEEcCC-----------HHHHHHHhcC----CCceE
Q 037961 34 RNLAWDVGTRSGQAAASLAQI-------------------YQHVIATDTS-----------PKQLKFAIKL----PNIRY 79 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~-------------------~~~v~~vD~s-----------~~~~~~a~~~----~~~~~ 79 (262)
..+|+|+||++|..|..+... -.+|+..|+. +.+.+.+++. .+--|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999999887643 1357788888 6666544331 12344
Q ss_pred EeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhHH---------------------------------------HH
Q 037961 80 QLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQF---------------------------------------YK 119 (262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~---------------------------------------l~ 119 (262)
..+.. +.+....++++++|+|+++.++||+ +.+.. |+
T Consensus 133 ~~gvp---gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 133 IGAMP---GSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp EEECC---SCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecc---hhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44431 3455566899999999999999999 54322 34
Q ss_pred HHHHhhcCCCeEEEEEecC
Q 037961 120 QVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 120 ~~~r~Lk~pgG~l~i~~~~ 138 (262)
..++.|+ |||++++...+
T Consensus 210 ~Ra~eL~-pGG~mvl~~~g 227 (384)
T 2efj_A 210 IHSEELI-SRGRMLLTFIC 227 (384)
T ss_dssp HHHHHEE-EEEEEEEEEEC
T ss_pred HHHHHhc-cCCeEEEEEec
Confidence 4489999 99999985554
No 265
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.86 E-value=1.7e-08 Score=88.94 Aligned_cols=111 Identities=12% Similarity=0.030 Sum_probs=81.6
Q ss_pred hHHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC----------------------------------------Ce
Q 037961 20 PKELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY----------------------------------------QH 57 (262)
Q Consensus 20 p~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~----------------------------------------~~ 57 (262)
.+.+...|+... .++..+||.+||+|.++...+..+ .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 356666665554 467889999999999998877643 34
Q ss_pred EEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc-C----ChhHHHHHHHHhh
Q 037961 58 VIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW-F----DLPQFYKQVKWVL 125 (262)
Q Consensus 58 v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~-~----d~~~~l~~~~r~L 125 (262)
|+|+|+|+.|++.|+++ ..+.+.++| +.+++.+ .+||+|+++..++- + +...+++++.+.|
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D------~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMR------LQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC------GGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECC------hHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 99999999999999863 247777765 5555433 48999999977652 2 2445777888888
Q ss_pred cCC--CeEEEEEecC
Q 037961 126 KKP--SGVIAAWTYT 138 (262)
Q Consensus 126 k~p--gG~l~i~~~~ 138 (262)
| + ||.+++.+..
T Consensus 332 k-~~~g~~~~iit~~ 345 (384)
T 3ldg_A 332 A-PLKTWSQFILTND 345 (384)
T ss_dssp T-TCTTSEEEEEESC
T ss_pred h-hCCCcEEEEEECC
Confidence 8 6 9998886653
No 266
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.85 E-value=4.3e-09 Score=97.83 Aligned_cols=120 Identities=11% Similarity=0.108 Sum_probs=82.8
Q ss_pred hhhHHHHHHHHhhCCCChHHHHHHHHhhCC---CCCeEEEEcCcccHhHHHHHh----hC-----------CeEEEEcCC
Q 037961 3 ELFIKQANLYAVARPNYPKELFKLIASKTP---KRNLAWDVGTRSGQAAASLAQ----IY-----------QHVIATDTS 64 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp~~~~~~l~~~~~---~~~~vlDvGcG~G~~~~~l~~----~~-----------~~v~~vD~s 64 (262)
+.|.++.-.|+++| ..+...+....+ ...+|||||||+|.++...+. .+ .+|+|||.|
T Consensus 380 e~fekD~vRy~~Y~----~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEkn 455 (745)
T 3ua3_A 380 NTFEQDQIKYDVYG----EAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKN 455 (745)
T ss_dssp HHHHHCHHHHHHHH----HHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECC
T ss_pred HHHcCChhhHHHHH----HHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCC
Confidence 67889999999875 555555544432 356899999999999754322 12 289999999
Q ss_pred HHHHHHHhc-----C-CCceEEeCCCCchhhhhhccCC-----CCceeeEEEccccccCChh---HHHHHHHHhhcCCCe
Q 037961 65 PKQLKFAIK-----L-PNIRYQLTPTMSITELEQNVAT-----QSSVDLVTIASALHWFDLP---QFYKQVKWVLKKPSG 130 (262)
Q Consensus 65 ~~~~~~a~~-----~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~D~V~~~~~~~~~d~~---~~l~~~~r~Lk~pgG 130 (262)
+.....++. . ..|+++.++ .+++.++ .+++|+|++-..=...+-+ ..+..+.+.|| |||
T Consensus 456 p~A~~~l~~~~~Ng~~d~VtVI~gd------~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lk-p~G 528 (745)
T 3ua3_A 456 PNAIVTLKYMNVRTWKRRVTIIESD------MRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLK-PTT 528 (745)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEEESC------GGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSC-TTC
T ss_pred hHHHHHHHHHHhcCCCCeEEEEeCc------hhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCC-CCc
Confidence 876654442 2 468888876 4444332 5789999986553322444 57777789999 999
Q ss_pred EEE
Q 037961 131 VIA 133 (262)
Q Consensus 131 ~l~ 133 (262)
.++
T Consensus 529 i~i 531 (745)
T 3ua3_A 529 ISI 531 (745)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 267
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.83 E-value=4.2e-09 Score=87.62 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=57.3
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCe--EEEEcCCHHHHHHHhcC----CCceEEeCC--CCchhhh
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQH--VIATDTSPKQLKFAIKL----PNIRYQLTP--TMSITEL 90 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~--v~~vD~s~~~~~~a~~~----~~~~~~~~~--~~~~~~~ 90 (262)
+.+.+.+.... .++.+|||+|||+|.+|. +. .+.+ |+|+|+++.|++.+++. ++++++.+| .+...+.
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 34455555443 467789999999999999 65 5677 99999999999999874 368888877 2222111
Q ss_pred hhccCCCCceeeEEEccc
Q 037961 91 EQNVATQSSVDLVTIASA 108 (262)
Q Consensus 91 ~~~~~~~~~~D~V~~~~~ 108 (262)
.+. .+..|.|+++..
T Consensus 85 ~~~---~~~~~~vvsNlP 99 (252)
T 1qyr_A 85 AEK---MGQPLRVFGNLP 99 (252)
T ss_dssp HHH---HTSCEEEEEECC
T ss_pred hcc---cCCceEEEECCC
Confidence 000 123578888876
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.83 E-value=4.7e-09 Score=88.60 Aligned_cols=63 Identities=6% Similarity=0.057 Sum_probs=53.0
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhCCe----EEEEcCCHHHHHHHhcC--CCceEEeCC
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIYQH----VIATDTSPKQLKFAIKL--PNIRYQLTP 83 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~----v~~vD~s~~~~~~a~~~--~~~~~~~~~ 83 (262)
+.+.+.|.... .++.+|||||||+|.+|..|++.+.+ |+|+|+|+.|++.+++. .+++++.+|
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D 98 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGD 98 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECC
Confidence 45566666654 46789999999999999999998777 99999999999999864 578888877
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.81 E-value=3.6e-08 Score=81.82 Aligned_cols=83 Identities=12% Similarity=0.080 Sum_probs=61.7
Q ss_pred HHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhhC-CeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhccC
Q 037961 21 KELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQIY-QHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNVA 95 (262)
Q Consensus 21 ~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~ 95 (262)
+.+.+.+.+... ++.+|||+|||+|.+|..+++.+ .+|+|+|+|+.|++.+++. .+++++.+| +..+++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D------~~~~~~ 90 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINED------ASKFPF 90 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSC------TTTCCG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcc------hhhCCh
Confidence 566777776653 67899999999999999999995 8999999999999999865 456777766 333333
Q ss_pred CC--CceeeEEEccccc
Q 037961 96 TQ--SSVDLVTIASALH 110 (262)
Q Consensus 96 ~~--~~~D~V~~~~~~~ 110 (262)
++ +.+ .|+++...+
T Consensus 91 ~~~~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 91 CSLGKEL-KVVGNLPYN 106 (249)
T ss_dssp GGSCSSE-EEEEECCTT
T ss_pred hHccCCc-EEEEECchh
Confidence 22 133 666666554
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.78 E-value=1.5e-08 Score=93.30 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=82.2
Q ss_pred hHHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh--------------------CCeEEEEcCCHHHHHHHhcC---
Q 037961 20 PKELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI--------------------YQHVIATDTSPKQLKFAIKL--- 74 (262)
Q Consensus 20 p~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~--------------------~~~v~~vD~s~~~~~~a~~~--- 74 (262)
|..+.+.+...+. ++.+|+|.|||+|.++..++.. ..+++|+|+++.+++.|+.+
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 6777777766553 4678999999999998887653 13799999999999998742
Q ss_pred ---CC-----ceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-Ch--------------hHHHHHHHHhhcCCCeE
Q 037961 75 ---PN-----IRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DL--------------PQFYKQVKWVLKKPSGV 131 (262)
Q Consensus 75 ---~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~--------------~~~l~~~~r~Lk~pgG~ 131 (262)
.. ..+..+|.+.. .+...++||+|+++..+... .. ..+++.+.+.|+ |||+
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~-----~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk-~gGr 307 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGS-----DGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH-PGGR 307 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSH-----HHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEE-EEEE
T ss_pred hCCCccccccCCeEeCCCccc-----ccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhC-CCCE
Confidence 22 56777763221 11235689999999887643 21 258999999999 9999
Q ss_pred EEEEec
Q 037961 132 IAAWTY 137 (262)
Q Consensus 132 l~i~~~ 137 (262)
+++...
T Consensus 308 ~a~V~p 313 (541)
T 2ar0_A 308 AAVVVP 313 (541)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998543
No 271
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.74 E-value=1e-08 Score=85.47 Aligned_cols=89 Identities=11% Similarity=-0.006 Sum_probs=63.2
Q ss_pred CeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHH-------HHhcC--------CCceEEeCCCCchhhhhh-ccCCCC
Q 037961 35 NLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLK-------FAIKL--------PNIRYQLTPTMSITELEQ-NVATQS 98 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~-------~a~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~ 98 (262)
.+|||+|||+|..+..++.++++|+++|+++.+++ .++++ .+++++.+| +.+ ++....
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D------~~~~L~~~~~ 163 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS------SLTALTDITP 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC------HHHHSTTCSS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC------HHHHHHhCcc
Confidence 78999999999999999999999999999997643 33321 246777766 322 221123
Q ss_pred ceeeEEEccccccCChhHHHHHHHHhhcCCCe
Q 037961 99 SVDLVTIASALHWFDLPQFYKQVKWVLKKPSG 130 (262)
Q Consensus 99 ~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG 130 (262)
+||+|++..++++-....++++..++|+ +.+
T Consensus 164 ~fDvV~lDP~y~~~~~saavkk~~~~lr-~l~ 194 (258)
T 2oyr_A 164 RPQVVYLDPMFPHKQKSALVKKEMRVFQ-SLV 194 (258)
T ss_dssp CCSEEEECCCCCCCCC-----HHHHHHH-HHS
T ss_pred cCCEEEEcCCCCCcccchHHHHHHHHHH-Hhh
Confidence 6999999998877654567888889998 655
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.71 E-value=2.5e-08 Score=85.01 Aligned_cols=87 Identities=11% Similarity=0.163 Sum_probs=63.8
Q ss_pred hCCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcC-----CCceEEeCCCCch
Q 037961 15 ARPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIKL-----PNIRYQLTPTMSI 87 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 87 (262)
+.|...+++++.+. ..++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++ .++.++.++
T Consensus 10 h~pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d---- 83 (301)
T 1m6y_A 10 HIPVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS---- 83 (301)
T ss_dssp CCCTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECC----
T ss_pred ccHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC----
Confidence 44555555555552 246789999999999999999987 47999999999999999853 468888876
Q ss_pred hhhhhcc-----CCCCceeeEEEcccc
Q 037961 88 TELEQNV-----ATQSSVDLVTIASAL 109 (262)
Q Consensus 88 ~~~~~~~-----~~~~~~D~V~~~~~~ 109 (262)
+.+++ ....+||.|++...+
T Consensus 84 --~~~l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 84 --YREADFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp --GGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred --HHHHHHHHHhcCCCCCCEEEEcCcc
Confidence 22221 112579999986543
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.70 E-value=7.8e-09 Score=95.98 Aligned_cols=118 Identities=15% Similarity=0.249 Sum_probs=80.4
Q ss_pred hhhHHHHHHHHhhCCCChHHHHHHHHhhC------CCCCeEEEEcCcccHhHHHHHh---h-CC--eEEEEcCCHHHHHH
Q 037961 3 ELFIKQANLYAVARPNYPKELFKLIASKT------PKRNLAWDVGTRSGQAAASLAQ---I-YQ--HVIATDTSPKQLKF 70 (262)
Q Consensus 3 ~~F~~~a~~Y~~~rp~yp~~~~~~l~~~~------~~~~~vlDvGcG~G~~~~~l~~---~-~~--~v~~vD~s~~~~~~ 70 (262)
+.|+++.-.|++++ +.+...|.... .+..+|||||||+|.+....++ . +. +|+|||-|+ |...
T Consensus 325 evFEkD~vKy~~Ye----~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~ 399 (637)
T 4gqb_A 325 EVFEKDPIKYSQYQ----QAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVV 399 (637)
T ss_dssp HHHTTCHHHHHHHH----HHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHH
T ss_pred hhhcCChhhHHHHH----HHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHH
Confidence 67889999999874 55555555443 1345799999999999655443 3 22 689999997 5555
Q ss_pred HhcC-------CCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCC---hhHHHHHHHHhhcCCCeEEE
Q 037961 71 AIKL-------PNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFD---LPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 71 a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d---~~~~l~~~~r~Lk~pgG~l~ 133 (262)
+++. ..|+++.++ .+++.+| .++|+|++-..=...+ ...++....|.|| |||.++
T Consensus 400 a~~~v~~N~~~dkVtVI~gd------~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LK-PgGimi 464 (637)
T 4gqb_A 400 TLENWQFEEWGSQVTVVSSD------MREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLK-DDGVSI 464 (637)
T ss_dssp HHHHHHHHTTGGGEEEEESC------TTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEE-EEEEEE
T ss_pred HHHHHHhccCCCeEEEEeCc------ceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcC-CCcEEc
Confidence 5542 568888876 5555544 6899999843222112 2346667788999 999875
No 274
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.69 E-value=1e-07 Score=82.72 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
+.++.+|||+||++|.+|..+++++.+|+|||+. .|-......+++.++.+| +.....+.++||+|+|..+.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~-~l~~~l~~~~~V~~~~~d------~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNG-PMAQSLMDTGQVTWLRED------GFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSS-CCCHHHHTTTCEEEECSC------TTTCCCCSSCEEEEEECCSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhh-hcChhhccCCCeEEEeCc------cccccCCCCCcCEEEEcCCCC
Confidence 4689999999999999999999999999999987 455566677899999876 333334567899999987764
Q ss_pred cCChhHHHHHHHHhhcCCC
Q 037961 111 WFDLPQFYKQVKWVLKKPS 129 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pg 129 (262)
+...+..+.+.|. .|
T Consensus 282 ---p~~~~~l~~~wl~-~~ 296 (375)
T 4auk_A 282 ---PAKVAALMAQWLV-NG 296 (375)
T ss_dssp ---HHHHHHHHHHHHH-TT
T ss_pred ---hHHhHHHHHHHHh-cc
Confidence 4566666666666 44
No 275
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.69 E-value=3.1e-08 Score=86.67 Aligned_cols=101 Identities=17% Similarity=0.259 Sum_probs=68.6
Q ss_pred CCeEEEEcCcccHhHHHHHh--------h---------CCeEEEEcCCHHHHHHHhc-CCC-----------------ce
Q 037961 34 RNLAWDVGTRSGQAAASLAQ--------I---------YQHVIATDTSPKQLKFAIK-LPN-----------------IR 78 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~-~~~-----------------~~ 78 (262)
..+|+|+|||+|..|..+.. + -.+|...|+....-...-+ ++. -.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 47899999999999988732 1 2367788887776543321 111 01
Q ss_pred EEeCCCCchhhhhhccCCCCceeeEEEccccccC-ChhH--------------------------------------HHH
Q 037961 79 YQLTPTMSITELEQNVATQSSVDLVTIASALHWF-DLPQ--------------------------------------FYK 119 (262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d~~~--------------------------------------~l~ 119 (262)
+..+. -+.+..-.+|+++||+|+++.++||+ +.+. +++
T Consensus 133 f~~gv---pgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 133 FVAGV---PGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp EEEEE---ESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEec---ChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22211 12344455789999999999999999 4332 477
Q ss_pred HHHHhhcCCCeEEEEEecC
Q 037961 120 QVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 120 ~~~r~Lk~pgG~l~i~~~~ 138 (262)
..++.|+ |||.+++...+
T Consensus 210 ~ra~eL~-pGG~mvl~~~g 227 (374)
T 3b5i_A 210 ARAAEVK-RGGAMFLVCLG 227 (374)
T ss_dssp HHHHHEE-EEEEEEEEEEE
T ss_pred HHHHHhC-CCCEEEEEEec
Confidence 7899999 99999985443
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.68 E-value=4.3e-08 Score=86.39 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=72.3
Q ss_pred CCCeEEEEcCcccHhHHHHHhh--C-CeEEEEcCCHHHHHHHhcC------CC--ceEEeCCCCchhhhhhc-c-CCCCc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI--Y-QHVIATDTSPKQLKFAIKL------PN--IRYQLTPTMSITELEQN-V-ATQSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~------~~--~~~~~~~~~~~~~~~~~-~-~~~~~ 99 (262)
++.+|||++||+|.++..++.. + .+|+++|+++..++.++++ .+ +++..+| +... . ...++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~D------a~~~l~~~~~~~ 125 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGME------ANFFLRKEWGFG 125 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC------HHHHHHSCCSSC
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCC------HHHHHHHhhCCC
Confidence 5678999999999999999985 4 5899999999999998863 23 6777765 2221 1 12457
Q ss_pred eeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 100 VDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 100 ~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
||+|++.. .-.+..++..+.++|+ |||.|++..
T Consensus 126 fD~V~lDP---~g~~~~~l~~a~~~Lk-~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDP---FGTPVPFIESVALSMK-RGGILSLTA 158 (392)
T ss_dssp EEEEEECC---SSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CcEEEECC---CcCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 99999876 1234679999999999 999888744
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.66 E-value=1.2e-07 Score=83.48 Aligned_cols=94 Identities=11% Similarity=0.114 Sum_probs=71.0
Q ss_pred CCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHHhcC---C---------------C---ceEEeCCCCchhh
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFAIKL---P---------------N---IRYQLTPTMSITE 89 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~---~---------------~---~~~~~~~~~~~~~ 89 (262)
++.+|||+|||+|..+..++.. + .+|+++|+++.+++.++++ . + +++..+|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~D------ 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD------ 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC------
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCc------
Confidence 6778999999999999999987 3 5899999999999998752 1 2 5566655
Q ss_pred hhhcc-CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 90 LEQNV-ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 90 ~~~~~-~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+..+. ...++||+|+... ......++..+.+.|| |||.+++.+
T Consensus 121 a~~~~~~~~~~fD~I~lDP---~~~~~~~l~~a~~~lk-~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP---FGSPMEFLDTALRSAK-RRGILGVTA 164 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC---SSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC---CCCHHHHHHHHHHhcC-CCCEEEEEe
Confidence 32221 1135799999653 1245789999999999 999887744
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.66 E-value=1.5e-07 Score=75.35 Aligned_cols=110 Identities=8% Similarity=0.087 Sum_probs=76.2
Q ss_pred CChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC---------CCceEEeCCCCch
Q 037961 18 NYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL---------PNIRYQLTPTMSI 87 (262)
Q Consensus 18 ~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~ 87 (262)
.++++..++|...+.+..+|||+|| |..|..+++. +.+|+.+|.++++.+.|++. .++++..++....
T Consensus 15 ~v~~~~~~~L~~~l~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 15 TMPPAEAEALRMAYEEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp CSCHHHHHHHHHHHHHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSB
T ss_pred cCCHHHHHHHHHHhhCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhh
Confidence 3556666666655567789999998 5788888875 68999999999999998852 2477887762110
Q ss_pred ------------hhhhhc-----cC-CCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 88 ------------TELEQN-----VA-TQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 88 ------------~~~~~~-----~~-~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
..+..+ .. ..++||+|+...... ...+..+.+.|+ |||++++
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~----~~~~~~~l~~l~-~GG~Iv~ 152 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR----VGCALATAFSIT-RPVTLLF 152 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH----HHHHHHHHHHCS-SCEEEEE
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc----hhHHHHHHHhcC-CCeEEEE
Confidence 001111 11 247899999765321 356677889999 9999976
No 279
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.65 E-value=2.3e-08 Score=83.15 Aligned_cols=111 Identities=12% Similarity=-0.029 Sum_probs=72.5
Q ss_pred HHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhc
Q 037961 21 KELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQN 93 (262)
Q Consensus 21 ~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~ 93 (262)
-+|.+..... +.+..+|||||||+|.+++.++.. + .+|+|+|++..+...+... .++.....+ .++.
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~----~dv~-- 150 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDK----TDVF-- 150 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECS----CCGG--
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCC----cchh--
Confidence 3444444443 357789999999999999988754 3 4789999987653322210 122222221 1222
Q ss_pred cCCCCceeeEEEccccc----cCChhH---HHHHHHHhhcCCC--eEEEEEecC
Q 037961 94 VATQSSVDLVTIASALH----WFDLPQ---FYKQVKWVLKKPS--GVIAAWTYT 138 (262)
Q Consensus 94 ~~~~~~~D~V~~~~~~~----~~d~~~---~l~~~~r~Lk~pg--G~l~i~~~~ 138 (262)
.++..++|+|+|..+.+ +.|... ++.-+.++|+ || |.|++=.+.
T Consensus 151 ~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk-~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQ-EGNYTEFCIKVLC 203 (282)
T ss_dssp GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEEESC
T ss_pred hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEec
Confidence 24678899999988877 444333 5777789999 99 999984444
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.58 E-value=9.3e-08 Score=87.91 Aligned_cols=112 Identities=17% Similarity=0.257 Sum_probs=79.2
Q ss_pred hHHHHHHHHhhCC-CCCeEEEEcCcccHhHHHHHhh-----------------CCeEEEEcCCHHHHHHHhcC---CC--
Q 037961 20 PKELFKLIASKTP-KRNLAWDVGTRSGQAAASLAQI-----------------YQHVIATDTSPKQLKFAIKL---PN-- 76 (262)
Q Consensus 20 p~~~~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~-----------------~~~v~~vD~s~~~~~~a~~~---~~-- 76 (262)
|..+.+.|...+. ...+|+|.+||+|.+...++.. ..+++|+|+++.+++.|+.+ .+
T Consensus 230 P~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 230 PKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp CHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 7888888877653 3358999999999988776432 34799999999999998842 22
Q ss_pred --ceEEeCCCCchhhhhhccCCCCceeeEEEccccc---cCC----------------------h-----hHHHHHHHHh
Q 037961 77 --IRYQLTPTMSITELEQNVATQSSVDLVTIASALH---WFD----------------------L-----PQFYKQVKWV 124 (262)
Q Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~---~~d----------------------~-----~~~l~~~~r~ 124 (262)
+.+..+|. +........+||+|+++..+. |-. + -.+++.+.+.
T Consensus 310 ~~i~i~~gDt-----L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~ 384 (544)
T 3khk_A 310 FNFGKKNADS-----FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYH 384 (544)
T ss_dssp CBCCSSSCCT-----TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHT
T ss_pred cccceeccch-----hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHH
Confidence 22244442 111223467899999987775 211 0 1489999999
Q ss_pred hcCCCeEEEEEec
Q 037961 125 LKKPSGVIAAWTY 137 (262)
Q Consensus 125 Lk~pgG~l~i~~~ 137 (262)
|+ |||++++...
T Consensus 385 Lk-~gGr~aiVlP 396 (544)
T 3khk_A 385 LA-PTGSMALLLA 396 (544)
T ss_dssp EE-EEEEEEEEEE
T ss_pred hc-cCceEEEEec
Confidence 99 9999998554
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.57 E-value=4.5e-08 Score=86.56 Aligned_cols=73 Identities=10% Similarity=-0.006 Sum_probs=57.1
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--------CCceEEeCCCCchhhhhhc-c-CCCCce
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--------PNIRYQLTPTMSITELEQN-V-ATQSSV 100 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 100 (262)
+.++.+|||+|||+|..+..+++.+.+|+++|+|+.|++.|+++ .+++++++| +.+. + .++++|
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~D------a~~~L~~~~~~~f 164 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGD------FKEYLPLIKTFHP 164 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESC------GGGSHHHHHHHCC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECc------HHHhhhhccCCCc
Confidence 34578999999999999999999999999999999999998753 357788876 2221 1 123579
Q ss_pred eeEEEcccc
Q 037961 101 DLVTIASAL 109 (262)
Q Consensus 101 D~V~~~~~~ 109 (262)
|+|++....
T Consensus 165 DvV~lDPPr 173 (410)
T 3ll7_A 165 DYIYVDPAR 173 (410)
T ss_dssp SEEEECCEE
T ss_pred eEEEECCCC
Confidence 999996544
No 282
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.54 E-value=2.4e-07 Score=69.55 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=64.5
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCccc-HhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCC
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSG-QAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQS 98 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G-~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (262)
+.+.++|.+...++.+|||||||+| ..+..|++ .+.+|+++|+++..++ ++.+|.+. .+.+ ...
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------~v~dDiF~-P~~~----~Y~ 88 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------IVRDDITS-PRME----IYR 88 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------EECCCSSS-CCHH----HHT
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------eEEccCCC-Cccc----ccC
Confidence 4566777777677789999999999 69999997 8999999999988665 66555221 0110 013
Q ss_pred ceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 99 SVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 99 ~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.||+|.+... |..+..-+.++-++-|.-++|...+
T Consensus 89 ~~DLIYsirP-----P~El~~~i~~lA~~v~adliI~pL~ 123 (153)
T 2k4m_A 89 GAALIYSIRP-----PAEIHSSLMRVADAVGARLIIKPLT 123 (153)
T ss_dssp TEEEEEEESC-----CTTTHHHHHHHHHHHTCEEEEECBT
T ss_pred CcCEEEEcCC-----CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 7999986433 3333333333333235567775444
No 283
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.53 E-value=5.5e-07 Score=77.04 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC------CCceEEeCCCCchhhhhhccCC---CCc
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL------PNIRYQLTPTMSITELEQNVAT---QSS 99 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~ 99 (262)
.++.+|||+|||+|..|..++.. ..+|+++|+++.+++.++++ .++.+..+| +..+... ..+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D------~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEED------FLAVSPSDPRYHE 174 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC------GGGSCTTCGGGTT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCC------hHhcCccccccCC
Confidence 56789999999999999999885 36899999999999988752 467787765 3333211 157
Q ss_pred eeeEEEc
Q 037961 100 VDLVTIA 106 (262)
Q Consensus 100 ~D~V~~~ 106 (262)
||.|++.
T Consensus 175 fD~Vl~D 181 (309)
T 2b9e_A 175 VHYILLD 181 (309)
T ss_dssp EEEEEEC
T ss_pred CCEEEEc
Confidence 9999973
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.50 E-value=8e-07 Score=83.99 Aligned_cols=112 Identities=17% Similarity=0.133 Sum_probs=77.6
Q ss_pred hHHHHHHHHhh----C----CCCCeEEEEcCcccHhHHHHHhhC-----CeEEEEcCCHHHHHHH--hcC-------CC-
Q 037961 20 PKELFKLIASK----T----PKRNLAWDVGTRSGQAAASLAQIY-----QHVIATDTSPKQLKFA--IKL-------PN- 76 (262)
Q Consensus 20 p~~~~~~l~~~----~----~~~~~vlDvGcG~G~~~~~l~~~~-----~~v~~vD~s~~~~~~a--~~~-------~~- 76 (262)
|.++.+.+... . +++.+|||.|||+|.+...++... .+++|+|+++.+++.| +.. .+
T Consensus 300 P~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi 379 (878)
T 3s1s_A 300 DIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN 379 (878)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT
T ss_pred CHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC
Confidence 67777776655 2 246799999999999999988764 3799999999999988 321 11
Q ss_pred --ceEEeCCCCchhhhhh-ccCCCCceeeEEEccccc--cCC----------------------------hhHHHHHHHH
Q 037961 77 --IRYQLTPTMSITELEQ-NVATQSSVDLVTIASALH--WFD----------------------------LPQFYKQVKW 123 (262)
Q Consensus 77 --~~~~~~~~~~~~~~~~-~~~~~~~~D~V~~~~~~~--~~d----------------------------~~~~l~~~~r 123 (262)
..+. ++ ++.. .+...++||+|+++..+- +-. ...+++.+.+
T Consensus 380 ~~~~I~-~d-----D~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~ 453 (878)
T 3s1s_A 380 NAPTIT-GE-----DVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTE 453 (878)
T ss_dssp BCCEEE-CC-----CGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHH
T ss_pred CcceEE-ec-----chhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHH
Confidence 1222 22 2222 112356899999998872 111 1126788999
Q ss_pred hhcCCCeEEEEEecC
Q 037961 124 VLKKPSGVIAAWTYT 138 (262)
Q Consensus 124 ~Lk~pgG~l~i~~~~ 138 (262)
.|+ |||+++++...
T Consensus 454 lLK-pGGrLAfIlP~ 467 (878)
T 3s1s_A 454 LVQ-DGTVISAIMPK 467 (878)
T ss_dssp HSC-TTCEEEEEEET
T ss_pred hcC-CCcEEEEEECh
Confidence 999 99999986654
No 285
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.48 E-value=6.7e-07 Score=84.70 Aligned_cols=111 Identities=12% Similarity=0.059 Sum_probs=76.1
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCcccHhHHHHHhhC-------------------------------------------
Q 037961 21 KELFKLIASKT--PKRNLAWDVGTRSGQAAASLAQIY------------------------------------------- 55 (262)
Q Consensus 21 ~~~~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~------------------------------------------- 55 (262)
+.+...++... +++..+||.+||+|.++...+..+
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 56666665554 366789999999999988776532
Q ss_pred -CeEEEEcCCHHHHHHHhcC-------CCceEEeCCCCchhhhhhc--cCCCCceeeEEEcccccc-C-C---hhHHHH-
Q 037961 56 -QHVIATDTSPKQLKFAIKL-------PNIRYQLTPTMSITELEQN--VATQSSVDLVTIASALHW-F-D---LPQFYK- 119 (262)
Q Consensus 56 -~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~D~V~~~~~~~~-~-d---~~~~l~- 119 (262)
.+++|+|+++.|++.|+.+ ..+.+.++| +.++ +...++||+|+++..+.- + + ...+++
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D------~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKD------VAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECC------GGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECC------hhhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 4799999999999999863 236777765 3333 223348999999977642 1 2 233444
Q ss_pred --HHHHhhcCCCeEEEEEecC
Q 037961 120 --QVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 120 --~~~r~Lk~pgG~l~i~~~~ 138 (262)
++.+.+. |||.+++.+..
T Consensus 330 l~~~lk~~~-~g~~~~ilt~~ 349 (703)
T 3v97_A 330 LGRIMKNQF-GGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHHC-TTCEEEEEESC
T ss_pred HHHHHHhhC-CCCeEEEEeCC
Confidence 4445556 79999986543
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.44 E-value=6.1e-07 Score=82.35 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=81.7
Q ss_pred hHHHHHHHHhhCC------CCCeEEEEcCcccHhHHHHHhh-----CCeEEEEcCCHHHHHHHhcC--------CCceEE
Q 037961 20 PKELFKLIASKTP------KRNLAWDVGTRSGQAAASLAQI-----YQHVIATDTSPKQLKFAIKL--------PNIRYQ 80 (262)
Q Consensus 20 p~~~~~~l~~~~~------~~~~vlDvGcG~G~~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~--------~~~~~~ 80 (262)
|..+.+.|...+. ++.+|+|.+||+|.+...++.. ..+++|+|+++.+++.|+.+ .++.+.
T Consensus 202 P~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 202 PQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp CHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 6777777666542 5679999999999998888775 45899999999999998742 244567
Q ss_pred eCCCCchhhhhhcc-CCCCceeeEEEccccc--cC-------Ch---------------hHHHHHHHHhhcCCCeEEEEE
Q 037961 81 LTPTMSITELEQNV-ATQSSVDLVTIASALH--WF-------DL---------------PQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~D~V~~~~~~~--~~-------d~---------------~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
.+|.+. .++| ....+||+|+++..+. |- |+ -.+++.+.+.|++|||++++.
T Consensus 282 ~gDtL~----~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 282 NADTLD----EDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp ESCTTT----SCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEE
T ss_pred ecceec----ccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEE
Confidence 776221 1122 3467899999986653 31 10 127899999998459999875
Q ss_pred ecC
Q 037961 136 TYT 138 (262)
Q Consensus 136 ~~~ 138 (262)
...
T Consensus 358 lP~ 360 (542)
T 3lkd_A 358 LPH 360 (542)
T ss_dssp EET
T ss_pred ecc
Confidence 543
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.40 E-value=4.6e-07 Score=75.82 Aligned_cols=110 Identities=9% Similarity=-0.078 Sum_probs=69.9
Q ss_pred HHHHHHH-hhCCCCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHHhc----CCCceEEeCCCCchhhhhhcc
Q 037961 22 ELFKLIA-SKTPKRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFAIK----LPNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 22 ~~~~~l~-~~~~~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~~~~~~ 94 (262)
+|.+... ..++++.+||||||++|.+++.+++. + ..|+|+|++..+...... ..++...... .++. .
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~----~di~--~ 142 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDK----SNVF--T 142 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECS----CCTT--T
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecC----ceee--e
Confidence 3433333 33468899999999999999999975 3 478899998653211110 0122222211 1122 2
Q ss_pred CCCCceeeEEEccccc----cCChh---HHHHHHHHhhcCCC-eEEEEEecC
Q 037961 95 ATQSSVDLVTIASALH----WFDLP---QFYKQVKWVLKKPS-GVIAAWTYT 138 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~----~~d~~---~~l~~~~r~Lk~pg-G~l~i~~~~ 138 (262)
+..+++|+|+|..+.+ ..|.. .++.-+.++|+ || |.|++=.+.
T Consensus 143 l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~Lk-pG~G~FV~KvF~ 193 (300)
T 3eld_A 143 MPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKH-VNTENFCVKVLA 193 (300)
T ss_dssp SCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCCEEEEEESS
T ss_pred cCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecc
Confidence 3567899999987777 22332 25777789999 99 999984444
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.26 E-value=5.8e-06 Score=69.05 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=68.1
Q ss_pred hCCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhh-hh
Q 037961 15 ARPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITE-LE 91 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~-~~ 91 (262)
|.|...+++++.+. ..++.+++|++||.|..|..+++++.+|+|+|.++.+++.|++. .++.++.++-..+.. +.
T Consensus 6 H~pVLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 6 HVPVLYQEALDLLA--VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp CCCTTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHH
T ss_pred chhHHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHH
Confidence 67888888888773 35778999999999999999999888999999999999988763 367888776111111 12
Q ss_pred hccCCCCceeeEEEcccc
Q 037961 92 QNVATQSSVDLVTIASAL 109 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~ 109 (262)
.. ..+++|.|++..++
T Consensus 84 ~~--g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 84 AL--GVERVDGILADLGV 99 (285)
T ss_dssp HT--TCSCEEEEEEECSC
T ss_pred Hc--CCCCcCEEEeCCcc
Confidence 22 23579999975443
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.23 E-value=2e-06 Score=71.49 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh-------C-------CeEEEEcCCH---HHHHHH-----------hcC---------
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI-------Y-------QHVIATDTSP---KQLKFA-----------IKL--------- 74 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-------~-------~~v~~vD~s~---~~~~~a-----------~~~--------- 74 (262)
.+..+|||+|+|+|..+..+++. . .+++++|..| ++++.+ +++
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35578999999999988876542 1 3799999876 554433 211
Q ss_pred -----------CCceEEeCCCCchhhhhh-ccC-CC---CceeeEEEccccccCC----hhHHHHHHHHhhcCCCeEEEE
Q 037961 75 -----------PNIRYQLTPTMSITELEQ-NVA-TQ---SSVDLVTIASALHWFD----LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 75 -----------~~~~~~~~~~~~~~~~~~-~~~-~~---~~~D~V~~~~~~~~~d----~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.++++..+ |+.+ ++- ++ .+||+|+....-.--+ ...+++.++++|+ |||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~G------Da~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFG------DINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEES------CHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE-EEEEEEE
T ss_pred chhheeccCCceEEEEEEC------cHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcC-CCcEEEE
Confidence 12334444 4444 331 22 3799999752111112 3469999999999 9999997
Q ss_pred Eec
Q 037961 135 WTY 137 (262)
Q Consensus 135 ~~~ 137 (262)
|+.
T Consensus 212 ysa 214 (257)
T 2qy6_A 212 FTS 214 (257)
T ss_dssp SCC
T ss_pred EeC
Confidence 664
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.19 E-value=2.1e-06 Score=72.96 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=51.1
Q ss_pred hCCCChHHHHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 15 ARPNYPKELFKLIASKT-PKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 15 ~rp~yp~~~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
+-..+|.++++.++... .++..|||++||+|..+..++..+.+++|+|+++.+++.|++
T Consensus 216 h~~~~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 216 HPAPFPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp --CCSCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 44568889988887654 578899999999999999999999999999999999999875
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.13 E-value=6.5e-06 Score=71.70 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=71.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcC--------------CCceEEeCCCCchhhhhhccCC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI-YQHVIATDTSPKQLKFAIKL--------------PNIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 96 (262)
++..+||=+|-|.|..++.+.++ ..+|+.||+++.+++.+++. ++++++.+|... -++...-.
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~--fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH--HHHhhhhc
Confidence 35678999999999999999886 45899999999999999862 235666665100 01111113
Q ss_pred CCceeeEEEccccccC--C---------hhHHHHHHHHhhcCCCeEEEEE
Q 037961 97 QSSVDLVTIASALHWF--D---------LPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~--d---------~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
.++||+|+....-... + ...+++.+.++|+ |||+++..
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~-p~GVlv~Q 330 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQ 330 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcC-CCCEEEEe
Confidence 4679999986432221 1 2457889999999 99999873
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.13 E-value=4e-06 Score=68.75 Aligned_cols=99 Identities=9% Similarity=-0.084 Sum_probs=61.0
Q ss_pred hCCCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHH--HHHHhcCCCceEEe---CCCCchhhhhhccCCCCceee
Q 037961 30 KTPKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQ--LKFAIKLPNIRYQL---TPTMSITELEQNVATQSSVDL 102 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~--~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~ 102 (262)
.++++.+|||+||++|.+++..++. ...|.|.++..+. .......+++.++. + .|+.+ ++..++|+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G-----~Df~~--~~~~~~Dv 142 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSG-----VDVFY--KPSEISDT 142 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-----CCGGG--SCCCCCSE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeecc-----CCccC--CCCCCCCE
Confidence 4578999999999999999999886 3344444444331 10000013443333 4 13333 24568999
Q ss_pred EEEccccc---cC-ChhH---HHHHHHHhhcCCCe-EEEEEe
Q 037961 103 VTIASALH---WF-DLPQ---FYKQVKWVLKKPSG-VIAAWT 136 (262)
Q Consensus 103 V~~~~~~~---~~-d~~~---~l~~~~r~Lk~pgG-~l~i~~ 136 (262)
|+|..+-. +. |... ++.-+.++|+ ||| .|++=.
T Consensus 143 VLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk-~gG~~FvvKV 183 (269)
T 2px2_A 143 LLCDIGESSPSAEIEEQRTLRILEMVSDWLS-RGPKEFCIKI 183 (269)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEE
T ss_pred EEeCCCCCCCccHHHHHHHHHHHHHHHHHhh-cCCcEEEEEE
Confidence 99865432 22 4333 5667779999 999 888733
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.82 E-value=0.00011 Score=61.40 Aligned_cols=115 Identities=9% Similarity=-0.020 Sum_probs=69.5
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh-CC-eEEEEcCCHHHHHHH---hcC--CCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI-YQ-HVIATDTSPKQLKFA---IKL--PNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+.++..||||||++|.++..++.. +. +|+|+|+...-.+.- +++ ..+.+..+- |+..++ ..++|+|
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~-----Dv~~l~--~~~~D~i 164 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGV-----DVFYRP--SECCDTL 164 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSC-----CTTSSC--CCCCSEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEecc-----CHhhCC--CCCCCEE
Confidence 357789999999999999977654 44 699999986621100 011 235555541 333333 3679999
Q ss_pred EEcccc----ccCChhH---HHHHHHHhhcCCC-eEEEEEecCC--CcccHHHHHhhccc
Q 037961 104 TIASAL----HWFDLPQ---FYKQVKWVLKKPS-GVIAAWTYTM--PEINESVGAVFKPF 153 (262)
Q Consensus 104 ~~~~~~----~~~d~~~---~l~~~~r~Lk~pg-G~l~i~~~~~--~~~~~~~~~~~~~~ 153 (262)
+|.-+= .++|... +|+-+.+.|+ +| |.|+|=.... +.+.+.+..+-..|
T Consensus 165 vcDigeSs~~~~ve~~Rtl~vLel~~~wL~-~~~~~f~~KVl~pY~~~v~e~l~~lq~~f 223 (321)
T 3lkz_A 165 LCDIGESSSSAEVEEHRTIRVLEMVEDWLH-RGPREFCVKVLCPYMPKVIEKMELLQRRY 223 (321)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEECccCCCChhhhhhHHHHHHHHHHHHhc-cCCCcEEEEEcCCCChHHHHHHHHHHHHh
Confidence 997661 1223222 5666678899 88 8888733332 44434444444444
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.72 E-value=0.00011 Score=61.66 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh-------CCeEEEEcCCHH--------------------------HHHHHhc-----
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI-------YQHVIATDTSPK--------------------------QLKFAIK----- 73 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-------~~~v~~vD~s~~--------------------------~~~~a~~----- 73 (262)
.....|||+|+..|..+..++.. ..+|+++|..+. .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34568899999999999887642 568999996421 2333432
Q ss_pred -C--CCceEEeCCCCchhhhhhcc-CCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 74 -L--PNIRYQLTPTMSITELEQNV-ATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 74 -~--~~~~~~~~~~~~~~~~~~~~-~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
. .+++++.++. .+.++ ++.++||+|....-. +-.....++.+...|+ |||++++=++
T Consensus 185 gl~~~~I~li~Gda-----~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~-pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWF-----KDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVS-VGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCH-----HHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEE-EEEEEEESSC
T ss_pred CCCcCceEEEEeCH-----HHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcC-CCEEEEEcCC
Confidence 1 5788998861 12222 345789999987542 1134568999999999 9999988333
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.72 E-value=0.00024 Score=65.05 Aligned_cols=116 Identities=10% Similarity=0.112 Sum_probs=77.7
Q ss_pred hHHHHHHHHhhCC--CCCeEEEEcCcccHhHHHHHhh---------------CCeEEEEcCCHHHHHHHhcC------CC
Q 037961 20 PKELFKLIASKTP--KRNLAWDVGTRSGQAAASLAQI---------------YQHVIATDTSPKQLKFAIKL------PN 76 (262)
Q Consensus 20 p~~~~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~~------~~ 76 (262)
|..+.+.+...+. ++.+|+|-+||+|.+......+ -..++|.|+++.+...|+-+ ..
T Consensus 202 P~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~ 281 (530)
T 3ufb_A 202 PRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY 281 (530)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC
T ss_pred cHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc
Confidence 7888888887763 5668999999999998776542 24699999999999988731 23
Q ss_pred ceEEeCCCCchhhhhhccCCCCceeeEEEccccccC-C---------------h-hHHHHHHHHhhcC------CCeEEE
Q 037961 77 IRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF-D---------------L-PQFYKQVKWVLKK------PSGVIA 133 (262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~-d---------------~-~~~l~~~~r~Lk~------pgG~l~ 133 (262)
..+..++.+... ... .....+||+|+++..+.-- + . -.+++.+.+.||+ |||+++
T Consensus 282 ~~I~~~dtL~~~-~~~-~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 282 PRIDPENSLRFP-LRE-MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp CEEECSCTTCSC-GGG-CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccCc-hhh-hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 345555522111 011 1134579999999887411 0 0 1267888888862 599999
Q ss_pred EEec
Q 037961 134 AWTY 137 (262)
Q Consensus 134 i~~~ 137 (262)
+...
T Consensus 360 vVlP 363 (530)
T 3ufb_A 360 VVVP 363 (530)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8554
No 296
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.70 E-value=0.00031 Score=61.04 Aligned_cols=100 Identities=18% Similarity=0.128 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCcccHhHHHHHhhCC--eEEEEcCCHHHHHHHhcC------------CCceEEeCCCCchhhhhhcc-CC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQIYQ--HVIATDTSPKQLKFAIKL------------PNIRYQLTPTMSITELEQNV-AT 96 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~~~~~~~~~~~-~~ 96 (262)
.++.+|||++||+|.=|.+++..+. .|+++|+++.-++..+++ .++.+...| +..++ ..
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D------~~~~~~~~ 220 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWD------GRKWGELE 220 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCC------GGGHHHHS
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCc------hhhcchhc
Confidence 5788999999999999999988754 799999999988766531 244555444 33322 24
Q ss_pred CCceeeEEEcccc-------c-------cC-C----------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 97 QSSVDLVTIASAL-------H-------WF-D----------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 97 ~~~~D~V~~~~~~-------~-------~~-d----------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.+.||.|++.-.+ . |- . ..+++..+.++|| |||+|+-.+++
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk-pGG~LVYsTCS 286 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK-PGGHVVYSTCS 286 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE-EEEEEEEEESC
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEEEEeCC
Confidence 5789999963221 1 11 1 1236778899999 99999986765
No 297
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.63 E-value=0.00015 Score=60.54 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=82.4
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC----CCceEEeCCCCchhhhhhccCC
Q 037961 21 KELFKLIASKTPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL----PNIRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 21 ~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~ 96 (262)
..+++.+... .+..+||+=+|||.++..+.+.+.+++.+|.++..++..+++ .++.+...|.+. .+..+..+
T Consensus 81 ~~yf~~l~~~--n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~--~L~~l~~~ 156 (283)
T 2oo3_A 81 LEYISVIKQI--NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVS--KLNALLPP 156 (283)
T ss_dssp HHHHHHHHHH--SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHH--HHHHHCSC
T ss_pred HHHHHHHHHh--cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHH--HHHHhcCC
Confidence 4567777663 234469999999999999999888999999999999988864 356667665111 12222234
Q ss_pred CCceeeEEEccccccC-ChhHHHHHHHH--hhcCCCeEEEEEecC
Q 037961 97 QSSVDLVTIASALHWF-DLPQFYKQVKW--VLKKPSGVIAAWTYT 138 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~-d~~~~l~~~~r--~Lk~pgG~l~i~~~~ 138 (262)
..+||+|++......- +.+++++.+.+ .+. |+|++++|-..
T Consensus 157 ~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~-~~Gi~v~WYPi 200 (283)
T 2oo3_A 157 PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKF-STGLYCVWYPV 200 (283)
T ss_dssp TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHC-TTSEEEEEEEE
T ss_pred CCCccEEEECCCCCCCcHHHHHHHHHHHhCccC-CCeEEEEEEec
Confidence 4579999999888754 66667666655 345 89999998754
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.63 E-value=8.5e-05 Score=61.71 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=50.1
Q ss_pred CCChHHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 17 PNYPKELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 17 p~yp~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
...|.++++.++.. ..++..|||..||+|..+......+.+++|+|+++..++.+++
T Consensus 195 ~~~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 195 TPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp CCCCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 45678888887665 4688999999999999999999999999999999999998875
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.62 E-value=0.00014 Score=58.82 Aligned_cols=114 Identities=11% Similarity=0.023 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCcccHhHHHHHhh-C-CeEEEEcCCHHHHHHHh--c---CCCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 31 TPKRNLAWDVGTRSGQAAASLAQI-Y-QHVIATDTSPKQLKFAI--K---LPNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+.++..|+|+||++|.+++..+.. + .+|+|+|+...-.+.-+ + -+.+.+..+- |+..+ +..++|.|
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gv-----Dv~~~--~~~~~Dtl 148 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGK-----DVFYL--PPEKCDTL 148 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSC-----CGGGC--CCCCCSEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEecc-----ceeec--CCccccEE
Confidence 367789999999999999977664 4 47999999865322100 0 1567777661 33333 34779999
Q ss_pred EEccccc----cCChhH---HHHHHHHhhcCCCeEEEEEec--CCCcccHHHHHhhccc
Q 037961 104 TIASALH----WFDLPQ---FYKQVKWVLKKPSGVIAAWTY--TMPEINESVGAVFKPF 153 (262)
Q Consensus 104 ~~~~~~~----~~d~~~---~l~~~~r~Lk~pgG~l~i~~~--~~~~~~~~~~~~~~~~ 153 (262)
+|.-+=- ++|... +++-+.+.|+ + |.|+|=.. ..+.+.+.+..+-.+|
T Consensus 149 lcDIgeSs~~~~vE~~RtlrvLela~~wL~-~-~~fc~KVl~py~p~v~e~l~~lq~~f 205 (267)
T 3p8z_A 149 LCDIGESSPSPTVEESRTIRVLKMVEPWLK-N-NQFCIKVLNPYMPTVIEHLERLQRKH 205 (267)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHGGGCS-S-CEEEEEESCCCSHHHHHHHHHHHHHH
T ss_pred EEecCCCCCChhhhhhHHHHHHHHHHHhcc-c-CCEEEEEccCCChhHHHHHHHHHHHh
Confidence 9965541 223323 5666678899 7 77777222 2333434444444443
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.58 E-value=0.00049 Score=57.44 Aligned_cols=117 Identities=14% Similarity=0.072 Sum_probs=70.5
Q ss_pred HHHHHHHh---hCCCCCeEEEEcC------cccHhH-HHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhh
Q 037961 22 ELFKLIAS---KTPKRNLAWDVGT------RSGQAA-ASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELE 91 (262)
Q Consensus 22 ~~~~~l~~---~~~~~~~vlDvGc------G~G~~~-~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 91 (262)
++.++|.. ..|.+++|||+|+ -+|.+. +.+.+.+..|+++|+.+-. .... .++++| ..
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~-----sda~-~~IqGD------~~ 162 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV-----SDAD-STLIGD------CA 162 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB-----CSSS-EEEESC------GG
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccc-----cCCC-eEEEcc------cc
Confidence 44555533 1268899999996 567642 2233345689999998542 1223 336665 22
Q ss_pred hccCCCCceeeEEEcccccc---CC---------hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhccc
Q 037961 92 QNVATQSSVDLVTIASALHW---FD---------LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKPF 153 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~---~d---------~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~~ 153 (262)
... ..++||+|+|..+-.- .| .+.++.-+.++|+ |||.|++=.+.... .+.+.++.+.|
T Consensus 163 ~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lk-pGGsFvVKVFQGsg-~~~L~~lrk~F 233 (344)
T 3r24_A 163 TVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSW-NADLYKLMGHF 233 (344)
T ss_dssp GEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSC-CHHHHHHHTTE
T ss_pred ccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCc-CCCEEEEEEecCCC-HHHHHHHHhhC
Confidence 222 2478999998544321 22 2336777889999 99999984443332 35566665544
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.53 E-value=0.00051 Score=58.73 Aligned_cols=94 Identities=11% Similarity=0.105 Sum_probs=65.5
Q ss_pred hhCCCChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHHHhh---CCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchh
Q 037961 14 VARPNYPKELFKLIASKTPKRNLAWDVGTRSGQAAASLAQI---YQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSIT 88 (262)
Q Consensus 14 ~~rp~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~ 88 (262)
.+.|...++.++.|. ..++.+++|..||.|..|..+++. ..+|+|+|.++.+++.++++ .++.++.++-..+.
T Consensus 40 ~H~pVLl~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 40 KHTTVLLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALG 117 (347)
T ss_dssp --CCTTTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHH
T ss_pred CcccccHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHH
Confidence 377777778777773 357889999999999999999886 35899999999999998643 46777776611111
Q ss_pred -hhhhccCCCCceeeEEEccccc
Q 037961 89 -ELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 89 -~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
-+...++. +++|.|+....+-
T Consensus 118 ~~L~~~g~~-~~vDgILfDLGVS 139 (347)
T 3tka_A 118 EYVAERDLI-GKIDGILLDLGVS 139 (347)
T ss_dssp HHHHHTTCT-TCEEEEEEECSCC
T ss_pred HHHHhcCCC-CcccEEEECCccC
Confidence 11222222 3699999866553
No 302
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.39 E-value=0.0011 Score=58.34 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCc--hhhhhhccCCCCceeeEEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMS--ITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~D~V~~ 105 (262)
..++.+||-+|||. |.++.++++. |+ +|+++|.+++.++.++++. ...+...... ...+.... ....+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~-~g~g~Dvvid 260 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQIL-GKPEVDCGVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHH-SSSCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHh-CCCCCCEEEE
Confidence 45788999999987 8888888874 87 8999999999999998763 3444332111 11222221 2236999996
Q ss_pred cccccc---------CChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHW---------FDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~---------~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
...-.. .++...++++.++|+ +||+++++..
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~-~gG~iv~~G~ 300 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVR-AGGAIGIPGI 300 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEE-EEEEEECCSC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHh-cCCEEEEecc
Confidence 554332 234568999999999 9999987553
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.38 E-value=0.00051 Score=59.50 Aligned_cols=54 Identities=9% Similarity=-0.034 Sum_probs=46.2
Q ss_pred CCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc---CCCceEEeCCCCch
Q 037961 34 RNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK---LPNIRYQLTPTMSI 87 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~---~~~~~~~~~~~~~~ 87 (262)
+..|||||+|.|.+|..|++. ..+|+++|+++.++...++ .++++++.+|.+..
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 588999999999999999986 5799999999999988875 36889998884443
No 304
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.29 E-value=0.00012 Score=77.96 Aligned_cols=106 Identities=16% Similarity=0.111 Sum_probs=53.7
Q ss_pred HHHHHHhhC-CCCCeEEEEcCcccHhHHHHHhh-------CCeEEEEcCCHHHHHHHhcC-C--CceEEeCCCCchhhhh
Q 037961 23 LFKLIASKT-PKRNLAWDVGTRSGQAAASLAQI-------YQHVIATDTSPKQLKFAIKL-P--NIRYQLTPTMSITELE 91 (262)
Q Consensus 23 ~~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-------~~~v~~vD~s~~~~~~a~~~-~--~~~~~~~~~~~~~~~~ 91 (262)
.++.+.+.. .+..+|||+|.|+|..+..+.+. ..+++.+|+|+...+.+++. . .++...-+ .+
T Consensus 1229 ~~~~~~~~~~~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d------~~ 1302 (2512)
T 2vz8_A 1229 CVDTALENMASPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWD------PA 1302 (2512)
T ss_dssp HHHHHHTTSSSSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCC------SS
T ss_pred HHHHHHhcCCCCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhccccccccc------cc
Confidence 444444443 35678999999999887766543 23789999998887777653 1 11111001 11
Q ss_pred h-ccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 92 Q-NVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 92 ~-~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
+ .++..++||+|++.+.+|-. +....+++++++|| |||.+++.
T Consensus 1303 ~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~-p~G~l~~~ 1347 (2512)
T 2vz8_A 1303 NPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLK-EGGFLLLH 1347 (2512)
T ss_dssp CCCC-----CCEEEEECC---------------------CCEEEEE
T ss_pred ccccCCCCceeEEEEcccccccccHHHHHHHHHHhcC-CCcEEEEE
Confidence 1 12245679999999999987 88899999999999 99998874
No 305
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.0019 Score=56.75 Aligned_cols=104 Identities=17% Similarity=0.108 Sum_probs=72.9
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCc--hhhhhhccCCCCceeeEEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMS--ITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~D~V~~ 105 (262)
..++.+||-+|||. |.++.++++. |+ +|+++|.+++-++.++++. ...+...... ...+.... ....+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~v~~~t-~g~g~Dvvid 260 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-FEIADLSLDTPLHEQIAALL-GEPEVDCAVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-CEEEETTSSSCHHHHHHHHH-SSSCEEEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-CcEEccCCcchHHHHHHHHh-CCCCCCEEEE
Confidence 45788999999986 8888888875 77 7999999999999998763 3444322100 11122221 2346999995
Q ss_pred ccc----------cccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASA----------LHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~----------~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
... .|+.++...++++.++|+ +||+++++..
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~iv~~G~ 301 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTR-VAGKIGIPGL 301 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEE-EEEEEEECSC
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHh-cCCEEEEecc
Confidence 443 344566778999999999 9999988653
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.15 E-value=0.0027 Score=49.89 Aligned_cols=98 Identities=17% Similarity=0.109 Sum_probs=64.2
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||..|+ |.|..+..++. .|++|+++|.+++.++.+++.............. ..+... .....+|+|+.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~ 114 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILEL-TDGYGVDVVLNS 114 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHH-TTTCCEEEEEEC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHH-hCCCCCeEEEEC
Confidence 357889999995 45666666655 5899999999999888887653222222111111 112221 123469999965
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.. ...++.+.+.|+ |||+++++.
T Consensus 115 ~g------~~~~~~~~~~l~-~~G~~v~~g 137 (198)
T 1pqw_A 115 LA------GEAIQRGVQILA-PGGRFIELG 137 (198)
T ss_dssp CC------THHHHHHHHTEE-EEEEEEECS
T ss_pred Cc------hHHHHHHHHHhc-cCCEEEEEc
Confidence 43 357889999999 999998854
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.14 E-value=0.0022 Score=56.13 Aligned_cols=78 Identities=9% Similarity=0.007 Sum_probs=57.4
Q ss_pred CeEEEEcCcccHhHHHHHhhCCe-EEEEcCCHHHHHHHhc-CCCceEEeCC--CCchhhhhhccCCCCceeeEEEccccc
Q 037961 35 NLAWDVGTRSGQAAASLAQIYQH-VIATDTSPKQLKFAIK-LPNIRYQLTP--TMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+++|+-||.|.++..+.+.|.+ +.++|+++..++..+. .++..++.+| .+...++....+..+.+|+|+....++
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 46899999999999999998886 4599999999987775 4677777777 332222222222456799999987766
Q ss_pred cC
Q 037961 111 WF 112 (262)
Q Consensus 111 ~~ 112 (262)
-+
T Consensus 83 ~f 84 (376)
T 3g7u_A 83 GF 84 (376)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.07 E-value=0.0027 Score=55.17 Aligned_cols=99 Identities=20% Similarity=0.148 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-+|||. |.++.++++. |+ +|+++|.+++.++.++++..-.++....... ..+... .++.+|+|+-.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~--~~gg~D~vid~ 265 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEI--TDGGVNFALES 265 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH--TTSCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHh--cCCCCcEEEEC
Confidence 35788999999987 8888888874 77 6999999999999988753222333221111 112222 23379999854
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ....++.+.+.|+ +||+++++..
T Consensus 266 ~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 290 (371)
T 1f8f_A 266 TG-----SPEILKQGVDALG-ILGKIAVVGA 290 (371)
T ss_dssp SC-----CHHHHHHHHHTEE-EEEEEEECCC
T ss_pred CC-----CHHHHHHHHHHHh-cCCEEEEeCC
Confidence 33 2467899999999 9999998654
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.96 E-value=0.0046 Score=52.98 Aligned_cols=99 Identities=18% Similarity=0.136 Sum_probs=69.5
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
..++.+||-.|+|. |.++.++++. |++|+++|.+++.++.++++..-..+....... ..+... .+.+|+|+-..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~---~g~~d~vid~~ 240 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKE---IGGAHGVLVTA 240 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH---HSSEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHh---CCCCCEEEEeC
Confidence 35788899999986 8888888874 889999999999999998864333333221111 112221 23689988542
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
. -...++.+.++|+ |||++++....
T Consensus 241 g-----~~~~~~~~~~~l~-~~G~iv~~G~~ 265 (340)
T 3s2e_A 241 V-----SPKAFSQAIGMVR-RGGTIALNGLP 265 (340)
T ss_dssp C-----CHHHHHHHHHHEE-EEEEEEECSCC
T ss_pred C-----CHHHHHHHHHHhc-cCCEEEEeCCC
Confidence 2 2567899999999 99999986543
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.80 E-value=0.0063 Score=52.43 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=68.6
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.+++-++.++++....++....... ..+.... ....+|+|+-.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t-~g~g~D~v~d~ 242 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKAT-DGKGVDKVVIA 242 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHT-TTCCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHc-CCCCCCEEEEC
Confidence 35788899999986 8888888875 77 8999999999999888753323332221111 1122221 23469999954
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. -...++.+.+.|+ |||++++...
T Consensus 243 ~g-----~~~~~~~~~~~l~-~~G~~v~~G~ 267 (352)
T 3fpc_A 243 GG-----DVHTFAQAVKMIK-PGSDIGNVNY 267 (352)
T ss_dssp SS-----CTTHHHHHHHHEE-EEEEEEECCC
T ss_pred CC-----ChHHHHHHHHHHh-cCCEEEEecc
Confidence 32 2367899999999 9999998654
No 311
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.77 E-value=0.0055 Score=53.10 Aligned_cols=100 Identities=15% Similarity=0.008 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
.+++.+||-+|+|. |.++.++++. |++|+++|.+++-++.+++...-..+..+.... ..+.... ....+|+|+-..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~-~g~g~D~vid~~ 265 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALT-GDRGADHILEIA 265 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-TTCCEEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHh-CCCCceEEEECC
Confidence 35788999999886 8888888774 899999999999999888753323333221111 1122221 234799999654
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
. ...++.+.+.|+ |||++++....
T Consensus 266 g------~~~~~~~~~~l~-~~G~iv~~G~~ 289 (363)
T 3uog_A 266 G------GAGLGQSLKAVA-PDGRISVIGVL 289 (363)
T ss_dssp T------SSCHHHHHHHEE-EEEEEEEECCC
T ss_pred C------hHHHHHHHHHhh-cCCEEEEEecC
Confidence 4 245788899999 99999986643
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.75 E-value=0.008 Score=51.89 Aligned_cols=99 Identities=11% Similarity=0.077 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC---Cc-hhhhhhccCCCCceeeE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT---MS-ITELEQNVATQSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~D~V 103 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.++.-++.+++...-..+..+. .. ...+.... . ..+|+|
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~-~-~g~D~v 246 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL-G-CKPEVT 246 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH-T-SCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh-C-CCCCEE
Confidence 46788999999986 8888888874 77 8999999999999888763222222110 00 01111111 2 569999
Q ss_pred EEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+-... ....++.+.++|+ |||+++++..
T Consensus 247 id~~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 274 (356)
T 1pl8_A 247 IECTG-----AEASIQAGIYATR-SGGTLVLVGL 274 (356)
T ss_dssp EECSC-----CHHHHHHHHHHSC-TTCEEEECSC
T ss_pred EECCC-----ChHHHHHHHHHhc-CCCEEEEEec
Confidence 85433 2457889999999 9999998654
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.66 E-value=0.011 Score=51.38 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=69.3
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhh-ccCCCCceeeEE
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQ-NVATQSSVDLVT 104 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~V~ 104 (262)
...++.+||-.|+|. |.++.++++. |+ +|+++|.++.-++.++++..-..+....... ..+.. .....+.+|+|+
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 346788899999986 8888888874 77 8999999999999888753222332211111 11111 012344799999
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
-... ....++.+.++|+ +||++++...
T Consensus 259 d~~G-----~~~~~~~~~~~l~-~~G~vv~~G~ 285 (370)
T 4ej6_A 259 ECAG-----VAETVKQSTRLAK-AGGTVVILGV 285 (370)
T ss_dssp ECSC-----CHHHHHHHHHHEE-EEEEEEECSC
T ss_pred ECCC-----CHHHHHHHHHHhc-cCCEEEEEec
Confidence 5432 2467899999999 9999998654
No 314
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.65 E-value=0.0094 Score=50.93 Aligned_cols=98 Identities=11% Similarity=0.034 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHH-hcCCCceEEeCCCCch-hhhhhccCCCCceeeEEE
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFA-IKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~ 105 (262)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++-++.+ ++......+....... ..+.... .+.+|+|+-
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~d~vi~ 224 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC--PKGIDVFFD 224 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC--TTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc--CCCceEEEE
Confidence 457899999998 45778777776 488999999999999988 6653222232221111 1222222 357999986
Q ss_pred ccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+.. ...+..+.+.|+ +||++++...
T Consensus 225 ~~g------~~~~~~~~~~l~-~~G~iv~~G~ 249 (336)
T 4b7c_A 225 NVG------GEILDTVLTRIA-FKARIVLCGA 249 (336)
T ss_dssp SSC------HHHHHHHHTTEE-EEEEEEECCC
T ss_pred CCC------cchHHHHHHHHh-hCCEEEEEee
Confidence 544 247889999999 9999998553
No 315
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.65 E-value=0.01 Score=50.65 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcC-c-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT-R-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.|+ | .|..+.++++ .|++|++++.+++-++.+++...-..+....... ..+.... ....+|+|+-+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~-~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFT-NGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHh-CCCCceEEEEC
Confidence 357889999994 3 4777777776 4899999999999999888764333333221111 1122221 23469999965
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...++.+.+.|+ +||++++...
T Consensus 225 ~g------~~~~~~~~~~l~-~~G~iv~~G~ 248 (334)
T 3qwb_A 225 VG------KDTFEISLAALK-RKGVFVSFGN 248 (334)
T ss_dssp CG------GGGHHHHHHHEE-EEEEEEECCC
T ss_pred CC------hHHHHHHHHHhc-cCCEEEEEcC
Confidence 44 256888999999 9999998654
No 316
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.61 E-value=0.0028 Score=54.21 Aligned_cols=57 Identities=14% Similarity=0.142 Sum_probs=49.7
Q ss_pred CChHHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcC
Q 037961 18 NYPKELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKL 74 (262)
Q Consensus 18 ~yp~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 74 (262)
..|.++++.++.. ..++..|||--||+|+.+......+.+.+|+|+++..++.++++
T Consensus 236 ~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 236 RFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp CCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGG
T ss_pred cCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHH
Confidence 4577888887764 46889999999999999999999999999999999999998864
No 317
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.60 E-value=0.012 Score=50.13 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCC-Cch-hhhhhccCCCCceeeEEE
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPT-MSI-TELEQNVATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~D~V~~ 105 (262)
..++.+||-.|| |.|..+..++. .|++|+++|.+++.++.+++........... ... ..+... ..+.+|+|+.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~--~~~~~d~vi~ 220 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKA--SPDGYDCYFD 220 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHH--CTTCEEEEEE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHH--hCCCCeEEEE
Confidence 357889999998 45777766665 5899999999999988886652212222111 111 112222 1257999997
Q ss_pred ccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+..- ..++.+.+.|+ +||+++++..
T Consensus 221 ~~g~------~~~~~~~~~l~-~~G~~v~~g~ 245 (333)
T 1v3u_A 221 NVGG------EFLNTVLSQMK-DFGKIAICGA 245 (333)
T ss_dssp SSCH------HHHHHHHTTEE-EEEEEEECCC
T ss_pred CCCh------HHHHHHHHHHh-cCCEEEEEec
Confidence 6552 45788999999 9999988654
No 318
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.58 E-value=0.0082 Score=51.45 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCc--ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVGTR--SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvGcG--~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
+++.+||-.|+| .|..+..+++ .|++|+++|.+++-++.+++...-..+....... ..+.... ....+|+|+-+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~-~~~g~Dvvid~~ 221 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELT-NGIGADAAIDSI 221 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHT-TTSCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHh-CCCCCcEEEECC
Confidence 578899999997 5777777776 5899999999999888888753323332221111 1122221 234799998654
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.- ....+..+.|+ +||++++....
T Consensus 222 g~------~~~~~~~~~l~-~~G~iv~~G~~ 245 (340)
T 3gms_A 222 GG------PDGNELAFSLR-PNGHFLTIGLL 245 (340)
T ss_dssp CH------HHHHHHHHTEE-EEEEEEECCCT
T ss_pred CC------hhHHHHHHHhc-CCCEEEEEeec
Confidence 32 22344558999 99999986543
No 319
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.57 E-value=0.017 Score=50.00 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCCeEEEEc-Ccc-cHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVG-TRS-GQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+||=.| +|. |.++.++++. +++|+++|.+++-++.+++...-.++....-....+..+ ..+.+|+|+-+..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~--~~~g~Dvvid~~g 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTTH 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTT--CSCCEEEEEECSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh--cCCCceEEEECCC
Confidence 567889998 664 8999999884 789999999999999998763323332221001122222 3457999985432
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
-...++.+.++|+ +||++++.
T Consensus 249 -----~~~~~~~~~~~l~-~~G~iv~~ 269 (363)
T 4dvj_A 249 -----TDKHAAEIADLIA-PQGRFCLI 269 (363)
T ss_dssp -----HHHHHHHHHHHSC-TTCEEEEC
T ss_pred -----chhhHHHHHHHhc-CCCEEEEE
Confidence 3457899999999 99999985
No 320
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.56 E-value=0.01 Score=50.45 Aligned_cols=100 Identities=12% Similarity=0.083 Sum_probs=67.7
Q ss_pred CCCCCeEEEEc-Cc-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVG-TR-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.| +| .|..+..+++ .|++|++++.+++-++.+++...-..+....... ..+.+. .....+|+|+-+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~-~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLEL-TDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHH-hCCCCceEEEEC
Confidence 35788999998 44 4888887776 4899999999999999888753223333221111 112222 133479999965
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
..- ..+..+.+.|+ +||++++....
T Consensus 217 ~g~------~~~~~~~~~l~-~~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VGQ------DTWLTSLDSVA-PRGLVVSFGNA 241 (325)
T ss_dssp SCG------GGHHHHHTTEE-EEEEEEECCCT
T ss_pred CCh------HHHHHHHHHhc-CCCEEEEEecC
Confidence 442 46788999999 99999986543
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.54 E-value=0.016 Score=49.79 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=67.2
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCC-Cc-hhhhhhccCC---CCceeeE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPT-MS-ITELEQNVAT---QSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~-~~~~~~~~~~---~~~~D~V 103 (262)
..++.+||-+|+|. |.++.++++ .|++|+++|.+++.++.+++...-..+.... .. ...+.... . ...+|+|
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~-~~~~g~g~D~v 244 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERI-RSAIGDLPNVT 244 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHH-HHHSSSCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHh-ccccCCCCCEE
Confidence 46788999999986 788888877 4889999999999999888753222222110 00 01111111 1 2469999
Q ss_pred EEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+-... ....++.+.++|+ +||+++++..
T Consensus 245 id~~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCSG-----NEKCITIGINITR-TGGTLMLVGM 272 (352)
T ss_dssp EECSC-----CHHHHHHHHHHSC-TTCEEEECSC
T ss_pred EECCC-----CHHHHHHHHHHHh-cCCEEEEEec
Confidence 85433 2457889999999 9999998654
No 322
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.49 E-value=0.0095 Score=51.11 Aligned_cols=96 Identities=18% Similarity=0.130 Sum_probs=66.2
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+||-+|+|. |..+.++++ .|+ +|+++|.+++-++.+++. .-..+....... ..+.... ...+|+|+-...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~--~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT--GSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH--SSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc--CCCCCEEEECCC
Confidence 778899999875 777777776 488 999999999988888776 333332221111 1122222 346999985433
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
....++.+.++|+ +||+++++..
T Consensus 241 -----~~~~~~~~~~~l~-~~G~iv~~g~ 263 (343)
T 2dq4_A 241 -----NEAAIHQGLMALI-PGGEARILGI 263 (343)
T ss_dssp -----CHHHHHHHHHHEE-EEEEEEECCC
T ss_pred -----CHHHHHHHHHHHh-cCCEEEEEec
Confidence 2457889999999 9999988654
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.48 E-value=0.0062 Score=52.98 Aligned_cols=96 Identities=20% Similarity=0.179 Sum_probs=67.1
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhh-hhhccCCCCceeeEEEc
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITE-LEQNVATQSSVDLVTIA 106 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~V~~~ 106 (262)
...++.+||-+|+|. |.++.++++ .|++|+++|.+++.++.+++...-.++.... .+ .+.+ . +.+|+|+-.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~--~-~g~Dvvid~ 264 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN---ADEMAAH--L-KSFDFILNT 264 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTC---HHHHHTT--T-TCEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEecccc---HHHHHHh--h-cCCCEEEEC
Confidence 346788999999986 888888877 4889999999999999888753223332221 11 2222 1 579999854
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..- ...++.+.++|+ +||+++.+..
T Consensus 265 ~g~-----~~~~~~~~~~l~-~~G~iv~~G~ 289 (369)
T 1uuf_A 265 VAA-----PHNLDDFTTLLK-RDGTMTLVGA 289 (369)
T ss_dssp CSS-----CCCHHHHHTTEE-EEEEEEECCC
T ss_pred CCC-----HHHHHHHHHHhc-cCCEEEEecc
Confidence 332 235778899999 9999988654
No 324
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.47 E-value=0.019 Score=49.18 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=67.5
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
...++.+||-+|+|. |..+.++++ .|++|+++|.++.-++.+++......+.....+. ..+.... +.+|+|+-+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~---~~~d~vid~ 237 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV---GGVHAAVVT 237 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH---SSEEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh---CCCCEEEEC
Confidence 346788999999974 777777776 4889999999999999888753222222111111 1122221 469999865
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.. ....++.+.++|+ +||+++++...
T Consensus 238 ~g-----~~~~~~~~~~~l~-~~G~~v~~g~~ 263 (339)
T 1rjw_A 238 AV-----SKPAFQSAYNSIR-RGGACVLVGLP 263 (339)
T ss_dssp SC-----CHHHHHHHHHHEE-EEEEEEECCCC
T ss_pred CC-----CHHHHHHHHHHhh-cCCEEEEeccc
Confidence 43 2457889999999 99999886543
No 325
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.46 E-value=0.018 Score=49.35 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=70.6
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
...++.+||-+|+|. |.++.++++. +.+|+++|.+++-++.++++..-.++..+.-....+.... ....+|+|+-.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t-~g~g~d~v~d~ 246 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT-GGQGATAVFDF 246 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHH-GGGCEEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHh-CCCCCeEEEEC
Confidence 356788999999986 8888888874 6899999999999999988643333332210011122221 22369999854
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.. ....++.+.++|+ +||++++....
T Consensus 247 ~G-----~~~~~~~~~~~l~-~~G~iv~~G~~ 272 (345)
T 3jv7_A 247 VG-----AQSTIDTAQQVVA-VDGHISVVGIH 272 (345)
T ss_dssp SC-----CHHHHHHHHHHEE-EEEEEEECSCC
T ss_pred CC-----CHHHHHHHHHHHh-cCCEEEEECCC
Confidence 33 2458899999999 99999986543
No 326
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.46 E-value=0.027 Score=49.44 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||=+|+|. |.++.++++. |+ +|+++|.++.-++.+++...-.++....... ..+..+. ....+|+|+-.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t-~g~g~D~vid~ 289 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYT-NGLGAKLFLEA 289 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT-TTCCCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHh-CCCCCCEEEEC
Confidence 45788899999976 7888888774 77 8999999999999998763323332221111 1222221 23469999854
Q ss_pred cccccCChhHHHHHHHHhh----cCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVL----KKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~L----k~pgG~l~i~~~~ 138 (262)
.. .....+..+.++| + +||++++....
T Consensus 290 ~g----~~~~~~~~~~~~l~~~~~-~~G~iv~~G~~ 320 (404)
T 3ip1_A 290 TG----VPQLVWPQIEEVIWRARG-INATVAIVARA 320 (404)
T ss_dssp SS----CHHHHHHHHHHHHHHCSC-CCCEEEECSCC
T ss_pred CC----CcHHHHHHHHHHHHhccC-CCcEEEEeCCC
Confidence 33 2223566666677 9 99999986643
No 327
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.44 E-value=0.011 Score=51.62 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-C-CeEEEEcCCHHHHHHHhcCCCceEEeCC---CCch-hhhhhccCCCCceeeE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-Y-QHVIATDTSPKQLKFAIKLPNIRYQLTP---TMSI-TELEQNVATQSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~D~V 103 (262)
..++.+||-+|+|. |.++.++++. | .+|+++|.+++-++.++++..-.++... .... ..+.... ....+|+|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~-~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDIT-HGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHT-TTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHh-CCCCCcEE
Confidence 45778999999875 8888888874 7 5999999999999998876322233211 0000 0111111 22369999
Q ss_pred EEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 104 TIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 104 ~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+-... ....++.+.++|+ +||+++++..
T Consensus 272 id~~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 299 (380)
T 1vj0_A 272 LEATG-----DSRALLEGSELLR-RGGFYSVAGV 299 (380)
T ss_dssp EECSS-----CTTHHHHHHHHEE-EEEEEEECCC
T ss_pred EECCC-----CHHHHHHHHHHHh-cCCEEEEEec
Confidence 85433 2357889999999 9999998654
No 328
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.44 E-value=0.014 Score=50.17 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=66.0
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+||-+|+|. |..+.++++ .|+ +|+++|.+++-++.+++...-..+..+.... ..+.... ....+|+|+-...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~-~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDIT-DGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT-TTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHc-CCCCCCEEEECCC
Confidence 778899999975 777777776 477 9999999999988887653222222211111 1122221 2336999986543
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
....++.+.+.|+ +||+++.+..
T Consensus 246 -----~~~~~~~~~~~l~-~~G~iv~~g~ 268 (348)
T 2d8a_A 246 -----APKALEQGLQAVT-PAGRVSLLGL 268 (348)
T ss_dssp -----CHHHHHHHHHHEE-EEEEEEECCC
T ss_pred -----CHHHHHHHHHHHh-cCCEEEEEcc
Confidence 2467889999999 9999988654
No 329
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.41 E-value=0.0084 Score=51.54 Aligned_cols=93 Identities=16% Similarity=0.064 Sum_probs=67.7
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
...++.+||-+|+|. |.++.++++. |++|+++|.+++-++.++++..-..+ .+ .+.+ .. .+|+|+-..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~------~~~~--~~-~~D~vid~~ 242 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TD------PKQC--KE-ELDFIISTI 242 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SS------GGGC--CS-CEEEEEECC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CC------HHHH--hc-CCCEEEECC
Confidence 346788999999986 8888888874 88999999999999999886433333 32 1111 12 799998543
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
. ....++.+.++|+ |||++++....
T Consensus 243 g-----~~~~~~~~~~~l~-~~G~iv~~G~~ 267 (348)
T 3two_A 243 P-----THYDLKDYLKLLT-YNGDLALVGLP 267 (348)
T ss_dssp C-----SCCCHHHHHTTEE-EEEEEEECCCC
T ss_pred C-----cHHHHHHHHHHHh-cCCEEEEECCC
Confidence 3 2236788999999 99999986543
No 330
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.018 Score=49.61 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.|+ |.|..+..++. .|++|++++.+++.++.+++.............. ..+... .....+|+|+.+
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~ 246 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY-VGEKGIDIIIEM 246 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHH-HCTTCEEEEEES
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHH-cCCCCcEEEEEC
Confidence 357889999997 45777777665 5899999999999988887653222222221111 112121 123469999866
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...+..+.++|+ +||+++++..
T Consensus 247 ~G------~~~~~~~~~~l~-~~G~iv~~g~ 270 (351)
T 1yb5_A 247 LA------NVNLSKDLSLLS-HGGRVIVVGS 270 (351)
T ss_dssp CH------HHHHHHHHHHEE-EEEEEEECCC
T ss_pred CC------hHHHHHHHHhcc-CCCEEEEEec
Confidence 44 246788899999 9999998663
No 331
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.31 E-value=0.028 Score=48.85 Aligned_cols=98 Identities=15% Similarity=0.036 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCC--CCch-hhhhhccCCCCceeeEEE
Q 037961 32 PKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTP--TMSI-TELEQNVATQSSVDLVTI 105 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~D~V~~ 105 (262)
.++.+||=+|+|. |.++.++++. |+ +|+++|.+++-++.+++...-.++... .... ..+..+ .++.+|+|+-
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--~~gg~D~vid 269 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDL--TDGGVDYSFE 269 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHH--TTSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHh--cCCCCCEEEE
Confidence 5778899999985 8888888874 77 899999999999999886332222211 0001 112222 2347999995
Q ss_pred ccccccCChhHHHHHHHHhhcCCC-eEEEEEec
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~ 137 (262)
... -...++.+.++|+ +| |++++...
T Consensus 270 ~~g-----~~~~~~~~~~~l~-~g~G~iv~~G~ 296 (378)
T 3uko_A 270 CIG-----NVSVMRAALECCH-KGWGTSVIVGV 296 (378)
T ss_dssp CSC-----CHHHHHHHHHTBC-TTTCEEEECSC
T ss_pred CCC-----CHHHHHHHHHHhh-ccCCEEEEEcc
Confidence 433 2467899999999 97 99998654
No 332
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.25 E-value=0.029 Score=48.67 Aligned_cols=99 Identities=14% Similarity=0.049 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC--Cch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT--MSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.+++-++.++++..-.++.... ... ..+... ..+.+|+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--t~gg~Dvvi 266 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEK--TNGGVDYAV 266 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHH--hCCCCCEEE
Confidence 35788999999986 8888888874 77 8999999999999998763222222111 001 112222 234799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCC-eEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~ 137 (262)
-... ....++.+.++|+ +| |+++++..
T Consensus 267 d~~g-----~~~~~~~~~~~l~-~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAG-----RIETMMNALQSTY-CGSGVTVVLGL 294 (373)
T ss_dssp ECSC-----CHHHHHHHHHTBC-TTTCEEEECCC
T ss_pred ECCC-----CHHHHHHHHHHHh-cCCCEEEEEcc
Confidence 5432 2457889999999 99 99988654
No 333
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.25 E-value=0.023 Score=48.60 Aligned_cols=98 Identities=13% Similarity=0.100 Sum_probs=66.2
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHh-cCCCceEEeCC-CCch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAI-KLPNIRYQLTP-TMSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-.|+ |.|..+..++. .|++|++++.+++.++.++ +.......... .... ..+.... .+.+|+|+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~--~~~~d~vi 230 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF--PNGIDIYF 230 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHC--TTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHh--CCCCcEEE
Confidence 357889999998 45777777776 5889999999999998887 44222222211 1011 1222221 25699998
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+.+ ...++.+.+.|+ +||+++++..
T Consensus 231 ~~~g------~~~~~~~~~~l~-~~G~~v~~G~ 256 (345)
T 2j3h_A 231 ENVG------GKMLDAVLVNMN-MHGRIAVCGM 256 (345)
T ss_dssp ESSC------HHHHHHHHTTEE-EEEEEEECCC
T ss_pred ECCC------HHHHHHHHHHHh-cCCEEEEEcc
Confidence 6644 247889999999 9999988553
No 334
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.25 E-value=0.0064 Score=51.90 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=49.6
Q ss_pred CChHHHHHHHHhh-CCCCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCH---HHHHHHhcC
Q 037961 18 NYPKELFKLIASK-TPKRNLAWDVGTRSGQAAASLAQIYQHVIATDTSP---KQLKFAIKL 74 (262)
Q Consensus 18 ~yp~~~~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~---~~~~~a~~~ 74 (262)
..|.++++.++.. ..++..|||--||+|..+......+.+.+|+|+++ ..++.++++
T Consensus 226 ~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 226 QKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTF 286 (319)
T ss_dssp CCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHH
Confidence 4678888887765 46889999999999999999999999999999999 999888753
No 335
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.23 E-value=0.027 Score=48.31 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=65.1
Q ss_pred CCCeEEEE-cCcc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 33 KRNLAWDV-GTRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 33 ~~~~vlDv-GcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++.+||=. |+|. |.++.++++. |++|++++.+++-++.+++...-..+..+.-....+... ....+|+|+-+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~--~~~g~Dvv~d~~g- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQ--GIELVDYVFCTFN- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHH--TCCCEEEEEESSC-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHh--CCCCccEEEECCC-
Confidence 67888988 5664 8888887764 889999999999999888753222222221001122222 3457999986422
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
....++.+.++|+ +||+++...
T Consensus 227 ----~~~~~~~~~~~l~-~~G~iv~~~ 248 (346)
T 3fbg_A 227 ----TDMYYDDMIQLVK-PRGHIATIV 248 (346)
T ss_dssp ----HHHHHHHHHHHEE-EEEEEEESS
T ss_pred ----chHHHHHHHHHhc-cCCEEEEEC
Confidence 3457889999999 999997643
No 336
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.19 E-value=0.03 Score=48.52 Aligned_cols=100 Identities=17% Similarity=0.095 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC--Cch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT--MSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.+++.++.+++...-.++.... ... ..+... ..+.+|+|+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~--~~~g~D~vi 267 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKM--TNGGVDFSL 267 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHH--HTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHH--hCCCCCEEE
Confidence 35778999999875 7888888774 77 8999999999999988763222222111 011 111122 124799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCC-eEEEEEecC
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTYT 138 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~~ 138 (262)
-... ....++.+.++|+ +| |+++++...
T Consensus 268 d~~g-----~~~~~~~~~~~l~-~~~G~iv~~G~~ 296 (374)
T 1cdo_A 268 ECVG-----NVGVMRNALESCL-KGWGVSVLVGWT 296 (374)
T ss_dssp ECSC-----CHHHHHHHHHTBC-TTTCEEEECSCC
T ss_pred ECCC-----CHHHHHHHHHHhh-cCCcEEEEEcCC
Confidence 5433 2457889999999 99 999986543
No 337
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.015 Score=50.01 Aligned_cols=99 Identities=10% Similarity=0.007 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCC-CCch-hhhhhccCCCCceeeEEE
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTP-TMSI-TELEQNVATQSSVDLVTI 105 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~D~V~~ 105 (262)
..++.+||-.|+ |.|..+..++. .|++|+++|.+++.++.+++.......... .... ..+.... .+.+|+|+.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~--~~~~D~vi~ 244 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKAT--DGGAHGVIN 244 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHH--TSCEEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHh--CCCCCEEEE
Confidence 457889999999 46777777766 589999999999888888765322222211 1111 1122221 126999986
Q ss_pred ccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+.+ ....++.+.+.|+ +||+++++..
T Consensus 245 ~~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 270 (347)
T 2hcy_A 245 VSV-----SEAAIEASTRYVR-ANGTTVLVGM 270 (347)
T ss_dssp CSS-----CHHHHHHHTTSEE-EEEEEEECCC
T ss_pred CCC-----cHHHHHHHHHHHh-cCCEEEEEeC
Confidence 644 2457889999999 9999988654
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.14 E-value=0.037 Score=48.00 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC--Cch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT--MSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-+|+|. |..+.++++. |+ +|+++|.+++.++.+++...-..+.... ... ..+... .++.+|+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~--~~~g~D~vi 266 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM--SNGGVDFSF 266 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHH--hCCCCcEEE
Confidence 35778999999886 7888888774 77 8999999999999988763222222111 001 112222 234799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCC-eEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~ 137 (262)
-... ....++.+.++|+ +| |+++++..
T Consensus 267 d~~g-----~~~~~~~~~~~l~-~~~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIG-----RLDTMVTALSCCQ-EAYGVSVIVGV 294 (374)
T ss_dssp ECSC-----CHHHHHHHHHHBC-TTTCEEEECSC
T ss_pred ECCC-----CHHHHHHHHHHhh-cCCcEEEEecc
Confidence 5432 2457889999999 99 99988654
No 339
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.13 E-value=0.018 Score=48.87 Aligned_cols=99 Identities=12% Similarity=0.074 Sum_probs=65.1
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
.+++.+||-.|+ |.|..+..++. .|++|+++|.+++.++.+++...-.......... ..+... .....+|+|+.+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi~~ 216 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEI-TGGKKVRVVYDS 216 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHH-hCCCCceEEEEC
Confidence 357889999994 45777666665 5899999999999888887642222222211111 112221 123469999966
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...++.+.++|+ +||+++++..
T Consensus 217 ~g------~~~~~~~~~~l~-~~G~iv~~g~ 240 (327)
T 1qor_A 217 VG------RDTWERSLDCLQ-RRGLMVSFGN 240 (327)
T ss_dssp SC------GGGHHHHHHTEE-EEEEEEECCC
T ss_pred Cc------hHHHHHHHHHhc-CCCEEEEEec
Confidence 54 356889999999 9999988654
No 340
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.13 E-value=0.023 Score=48.68 Aligned_cols=99 Identities=18% Similarity=0.068 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.|+ |.|..+..++. .|++|+++|.+++.++.+++......+....... ..+... .....+|+|+.+
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~d~vi~~ 242 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL-TGGKGADKVVDH 242 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHH-TTTTCEEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHH-hCCCCceEEEEC
Confidence 357889999998 56888877776 5889999999999998887642222222211111 112222 123479999966
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...++.+.++|+ ++|+++.+..
T Consensus 243 ~g------~~~~~~~~~~l~-~~G~~v~~g~ 266 (343)
T 2eih_A 243 TG------ALYFEGVIKATA-NGGRIAIAGA 266 (343)
T ss_dssp SC------SSSHHHHHHHEE-EEEEEEESSC
T ss_pred CC------HHHHHHHHHhhc-cCCEEEEEec
Confidence 54 245788899999 9999988553
No 341
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.11 E-value=0.018 Score=49.63 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCCeEEEEc-Cc-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCc-hhhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVG-TR-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMS-ITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~V~~~~ 107 (262)
+++.+||-.| +| .|..+..+++ .|++|+++|.+++.++.+++...-..+...... ...+.... ...+|+|+-+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~--~~g~Dvvid~~ 243 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET--GQGVDIILDMI 243 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH--SSCEEEEEESC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh--CCCceEEEECC
Confidence 5788999984 34 4777777776 489999999999999988875332333322111 11222222 45799999654
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.- ..++.+.+.|+ +||++++...
T Consensus 244 g~------~~~~~~~~~l~-~~G~iv~~g~ 266 (353)
T 4dup_A 244 GA------AYFERNIASLA-KDGCLSIIAF 266 (353)
T ss_dssp CG------GGHHHHHHTEE-EEEEEEECCC
T ss_pred CH------HHHHHHHHHhc-cCCEEEEEEe
Confidence 42 36788899999 9999988654
No 342
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.10 E-value=0.032 Score=48.45 Aligned_cols=99 Identities=15% Similarity=0.028 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC--Cch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT--MSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.+++-++.++++..-..+.... ... ..+... ..+.+|+|+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~--~~~g~Dvvi 270 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITEL--TAGGVDYSL 270 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--HTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHH--hCCCccEEE
Confidence 35778999999885 8888888874 77 8999999999999988763222222111 001 112222 123799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCC-eEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~ 137 (262)
-... ....++.+.++|+ +| |+++++..
T Consensus 271 d~~G-----~~~~~~~~~~~l~-~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCAG-----TAQTLKAAVDCTV-LGWGSCTVVGA 298 (376)
T ss_dssp ESSC-----CHHHHHHHHHTBC-TTTCEEEECCC
T ss_pred ECCC-----CHHHHHHHHHHhh-cCCCEEEEECC
Confidence 5433 2467889999999 99 99998654
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.09 E-value=0.091 Score=44.81 Aligned_cols=101 Identities=17% Similarity=0.097 Sum_probs=67.9
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhh-hhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPTMSITEL-EQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~V~~~ 106 (262)
..++.+||=.|+|. |.++.++++. |+ .++++|.+++-++.++++-....+........+. ..+. ....+|+|+-.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~-~~~g~d~v~d~ 236 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLR-ELRFNQLILET 236 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHG-GGCSSEEEEEC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhc-ccCCccccccc
Confidence 35788999999986 6677777764 65 5689999999999999874444444332111111 1111 23457888744
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.. -...++.+.++|+ +||++++....
T Consensus 237 ~G-----~~~~~~~~~~~l~-~~G~~v~~g~~ 262 (346)
T 4a2c_A 237 AG-----VPQTVELAVEIAG-PHAQLALVGTL 262 (346)
T ss_dssp SC-----SHHHHHHHHHHCC-TTCEEEECCCC
T ss_pred cc-----ccchhhhhhheec-CCeEEEEEecc
Confidence 22 3567889999999 99999986643
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.99 E-value=0.034 Score=48.11 Aligned_cols=99 Identities=13% Similarity=0.042 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CC-eEEEEcCCHHHHHHHhcCCCceEEeCCC--Cch-hhhhhccCCCCceeeEE
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQ-HVIATDTSPKQLKFAIKLPNIRYQLTPT--MSI-TELEQNVATQSSVDLVT 104 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~D~V~ 104 (262)
..++.+||-+|+|. |.++.++++. |+ +|+++|.+++.++.+++...-.++.... ... ..+... ..+.+|+|+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~--~~~g~D~vi 265 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM--TDGGVDYSF 265 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHH--hCCCCCEEE
Confidence 35778999999876 7888888774 77 8999999999999888653222221111 001 112222 234799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCC-eEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPS-GVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pg-G~l~i~~~ 137 (262)
-... ....++.+.++|+ +| |+++++..
T Consensus 266 d~~g-----~~~~~~~~~~~l~-~~~G~iv~~G~ 293 (373)
T 2fzw_A 266 ECIG-----NVKVMRAALEACH-KGWGVSVVVGV 293 (373)
T ss_dssp ECSC-----CHHHHHHHHHTBC-TTTCEEEECSC
T ss_pred ECCC-----cHHHHHHHHHhhc-cCCcEEEEEec
Confidence 5433 2457889999999 99 99998654
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.97 E-value=0.018 Score=49.34 Aligned_cols=99 Identities=10% Similarity=0.034 Sum_probs=66.9
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHh-h--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEE
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQ-I--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~-~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~ 105 (262)
.. ++.+||-+|+|. |.++.++++ . |++|+++|.+++-++.+++...-.++..... ....+.+. ....+|+|+-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~-~g~g~D~vid 244 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDA-ESLINKLT-DGLGASIAID 244 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHH-HHHHHHHH-TTCCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccc-hHHHHHhh-cCCCccEEEE
Confidence 45 788999999975 777777776 5 8899999999999998886532222211000 00011221 1336999996
Q ss_pred ccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
... ....++.+.++|+ +||+++++..
T Consensus 245 ~~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 270 (344)
T 2h6e_A 245 LVG-----TEETTYNLGKLLA-QEGAIILVGM 270 (344)
T ss_dssp SSC-----CHHHHHHHHHHEE-EEEEEEECCC
T ss_pred CCC-----ChHHHHHHHHHhh-cCCEEEEeCC
Confidence 543 2457899999999 9999988654
No 346
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.95 E-value=0.042 Score=47.48 Aligned_cols=98 Identities=21% Similarity=0.167 Sum_probs=67.2
Q ss_pred CCCCCeEEEEc-Cc-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVG-TR-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
.+++.+||-.| +| .|..+..+++ .|++|++++.+++.++.+++...-.....+.... ..+... ....+|+|+-+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~--~~~g~D~vid~ 238 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQE--YPEGVDVVYES 238 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH--CTTCEEEEEEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHh--cCCCCCEEEEC
Confidence 46788999999 34 5888888776 4889999999999988888753222332221111 112222 23469999965
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...++.+.++|+ +||+++++..
T Consensus 239 ~g------~~~~~~~~~~l~-~~G~iv~~g~ 262 (362)
T 2c0c_A 239 VG------GAMFDLAVDALA-TKGRLIVIGF 262 (362)
T ss_dssp SC------THHHHHHHHHEE-EEEEEEECCC
T ss_pred CC------HHHHHHHHHHHh-cCCEEEEEeC
Confidence 44 257889999999 9999988653
No 347
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.91 E-value=0.019 Score=49.22 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCCCeEEEEcC--cccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVGT--RSGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
.++.+||-.|+ |.|..+.++++. |++|++++.+++-++.+++...-.....+ ... ..+... .....+|+|+-+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~-~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREA-TGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHH-TTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHH-hCCCCceEEEECC
Confidence 57889999998 348888887764 89999999999998888875322222222 001 112222 1234699999654
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.- ..+..+.+.|+ +||++++...
T Consensus 236 g~------~~~~~~~~~l~-~~G~iv~~G~ 258 (342)
T 4eye_A 236 GG------PAFDDAVRTLA-SEGRLLVVGF 258 (342)
T ss_dssp C--------CHHHHHHTEE-EEEEEEEC--
T ss_pred ch------hHHHHHHHhhc-CCCEEEEEEc
Confidence 42 25788999999 9999998553
No 348
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.85 E-value=0.017 Score=49.72 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=58.4
Q ss_pred CeEEEEcCcccHhHHHHHhhC--C-eEEEEcCCHHHHHHHhcC-CCceEEeCC--CCchhhhhhccCCCCceeeEEEccc
Q 037961 35 NLAWDVGTRSGQAAASLAQIY--Q-HVIATDTSPKQLKFAIKL-PNIRYQLTP--TMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
.+++|+.||.|.++..+...| . .|.++|+++..++..+.+ ++..+..+| .+...+ + +...+|+|+....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~---~--~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE---F--DRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHH---H--HHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhH---c--CcCCcCEEEEcCC
Confidence 468999999999999999887 3 588999999999988754 566666666 211111 1 1125899999877
Q ss_pred cccC----------Chh-HHHHHHHHhhc
Q 037961 109 LHWF----------DLP-QFYKQVKWVLK 126 (262)
Q Consensus 109 ~~~~----------d~~-~~l~~~~r~Lk 126 (262)
++-+ |.. .++.++.++++
T Consensus 78 Cq~fS~ag~~~g~~d~r~~l~~~~~~~i~ 106 (343)
T 1g55_A 78 CQPFTRIGRQGDMTDSRTNSFLHILDILP 106 (343)
T ss_dssp ------------------CHHHHHHHHGG
T ss_pred CcchhhcCCcCCccCccchHHHHHHHHHH
Confidence 5533 211 26667777776
No 349
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.80 E-value=0.035 Score=47.77 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=64.6
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.|+ |.|..+..++. .|++|+++|.+++.++.+++...-.......... ..+... .....+|+|+.+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~d~vi~~ 238 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKF-TKGAGVNLILDC 238 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHH-hcCCCceEEEEC
Confidence 357789999984 45777776665 5889999999999988887542222222211111 112222 123469999865
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..- ..++.+.++|+ +||+++++..
T Consensus 239 ~G~------~~~~~~~~~l~-~~G~iv~~G~ 262 (354)
T 2j8z_A 239 IGG------SYWEKNVNCLA-LDGRWVLYGL 262 (354)
T ss_dssp SCG------GGHHHHHHHEE-EEEEEEECCC
T ss_pred CCc------hHHHHHHHhcc-CCCEEEEEec
Confidence 542 35788899999 9999998664
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.80 E-value=0.029 Score=48.09 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=66.2
Q ss_pred hCCCCCeEEEEcCc--ccHhHHHHHh-h-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCc-hhhhhhccCCCCceeeEE
Q 037961 30 KTPKRNLAWDVGTR--SGQAAASLAQ-I-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMS-ITELEQNVATQSSVDLVT 104 (262)
Q Consensus 30 ~~~~~~~vlDvGcG--~G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~V~ 104 (262)
...++.+||-.|+| .|..+..++. . |++|+++|.+++.++.+++...-......... ...+.... ..+.+|+|+
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi 245 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT-ESKGVDAVI 245 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT-TTSCEEEEE
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh-cCCCceEEE
Confidence 34678899999998 4666666654 5 89999999999998888764222222221111 01122221 114799998
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+.. ....++.+.++|+ +||+++++..
T Consensus 246 ~~~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 272 (347)
T 1jvb_A 246 DLNN-----SEKTLSVYPKALA-KQGKYVMVGL 272 (347)
T ss_dssp ESCC-----CHHHHTTGGGGEE-EEEEEEECCS
T ss_pred ECCC-----CHHHHHHHHHHHh-cCCEEEEECC
Confidence 6543 2457888899999 9999988654
No 351
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.73 E-value=0.034 Score=47.37 Aligned_cols=99 Identities=17% Similarity=0.107 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||-.|+ |.|..+..++. .|++|+++|.+++.++.+++...-.......... ..+.... ....+|+|+.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~-~~~~~d~vi~~ 221 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREIT-GGKGVDVVYDS 221 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-TTCCEEEEEEC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHh-CCCCCeEEEEC
Confidence 357889999995 45777777665 5899999999998888877642212222211111 1122211 23469999965
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..- ..++.+.++|+ +||+++.+..
T Consensus 222 ~g~------~~~~~~~~~l~-~~G~iv~~g~ 245 (333)
T 1wly_A 222 IGK------DTLQKSLDCLR-PRGMCAAYGH 245 (333)
T ss_dssp SCT------TTHHHHHHTEE-EEEEEEECCC
T ss_pred CcH------HHHHHHHHhhc-cCCEEEEEec
Confidence 442 56788999999 9999988654
No 352
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.72 E-value=0.058 Score=46.46 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHhh-CCe-EEEEcCCHHHHHHHhcCC-C-ceEEeCCCCchhh----hhhccCCCCcee
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQI-YQH-VIATDTSPKQLKFAIKLP-N-IRYQLTPTMSITE----LEQNVATQSSVD 101 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~~~D 101 (262)
..++.+||=.|+|. |.++.++++. |++ |+++|.+++-++.+++.. . +.+...+ ....+ +... .....+|
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~-~~~~~~~~~v~~~-t~g~g~D 254 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVER-LSAEESAKKIVES-FGGIEPA 254 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCS-CCHHHHHHHHHHH-TSSCCCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccc-cchHHHHHHHHHH-hCCCCCC
Confidence 46778889999986 8888888875 776 999999999999888752 1 1221110 00011 1111 1245799
Q ss_pred eEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 102 LVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 102 ~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+|+-... -...++.+.++|+ +||++++....
T Consensus 255 vvid~~g-----~~~~~~~~~~~l~-~~G~iv~~G~~ 285 (363)
T 3m6i_A 255 VALECTG-----VESSIAAAIWAVK-FGGKVFVIGVG 285 (363)
T ss_dssp EEEECSC-----CHHHHHHHHHHSC-TTCEEEECCCC
T ss_pred EEEECCC-----ChHHHHHHHHHhc-CCCEEEEEccC
Confidence 9995433 2457899999999 99999986543
No 353
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.72 E-value=0.071 Score=45.51 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHh-h-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCc-hhhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQ-I-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMS-ITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||=+|+|+ |.++..+++ . +.+|+++|.+++-++.+++......+.....+ .+.+.... ....+|.++..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t-~g~g~d~~~~~ 239 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKIT-GGLGVQSAIVC 239 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHT-TSSCEEEEEEC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhc-CCCCceEEEEe
Confidence 46788999999987 445555554 3 78999999999999888876443343332111 11222221 23357776643
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
. .-...+..+.++|+ ++|++++....
T Consensus 240 ~-----~~~~~~~~~~~~l~-~~G~~v~~g~~ 265 (348)
T 4eez_A 240 A-----VARIAFEQAVASLK-PMGKMVAVAVP 265 (348)
T ss_dssp C-----SCHHHHHHHHHTEE-EEEEEEECCCC
T ss_pred c-----cCcchhheeheeec-CCceEEEEecc
Confidence 2 23567889999999 99999886543
No 354
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.71 E-value=0.051 Score=46.80 Aligned_cols=93 Identities=18% Similarity=0.214 Sum_probs=64.1
Q ss_pred CeEEEEcCcc-cHhH-HHHH-h-hCCe-EEEEcCCHH---HHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 35 NLAWDVGTRS-GQAA-ASLA-Q-IYQH-VIATDTSPK---QLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 35 ~~vlDvGcG~-G~~~-~~l~-~-~~~~-v~~vD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
.+||-+|+|. |.++ .+++ + .|++ |+++|.+++ -++.++++. ............++... .+.+|+|+-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG-a~~v~~~~~~~~~i~~~---~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD-ATYVDSRQTPVEDVPDV---YEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT-CEEEETTTSCGGGHHHH---SCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC-CcccCCCccCHHHHHHh---CCCCCEEEEC
Confidence 8899999875 8888 8888 6 4777 999999988 888888753 33332211111112223 2379999854
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ....++.+.++|+ +||++++...
T Consensus 250 ~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 274 (357)
T 2b5w_A 250 TG-----FPKHAIQSVQALA-PNGVGALLGV 274 (357)
T ss_dssp SC-----CHHHHHHHHHHEE-EEEEEEECCC
T ss_pred CC-----ChHHHHHHHHHHh-cCCEEEEEeC
Confidence 33 2357889999999 9999988554
No 355
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.70 E-value=0.16 Score=43.46 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh--CCeEEEEcCCHHHHHHHhc----C-----------------------CCceEEeC
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI--YQHVIATDTSPKQLKFAIK----L-----------------------PNIRYQLT 82 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~----~-----------------------~~~~~~~~ 82 (262)
.+...|+.+|||.......+... +..++-||. |++++.-++ . .+..++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35678999999999999998875 345666776 666654332 1 34555655
Q ss_pred CCCchhh----hhhccCCCCceeeEEEccccccCChhH---HHHHHHHhhcCCCeEEEEEecC
Q 037961 83 PTMSITE----LEQNVATQSSVDLVTIASALHWFDLPQ---FYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 83 ~~~~~~~----~~~~~~~~~~~D~V~~~~~~~~~d~~~---~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
|-....- +...+ ......++++-.++++++++. +++.+.+.+ |+|.++++...
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~--~~~~~v~~e~i 234 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF--SHGLWISYDPI 234 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEEC
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC--CCcEEEEEecc
Confidence 5111111 23333 345678999999999997776 555565554 68888766543
No 356
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.53 E-value=0.074 Score=45.69 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=64.8
Q ss_pred CCCC--CeEEEEcC--cccHhHHHHHh-hCC-eEEEEcCCHHHHHHHhc-CCCceEEeCCCCch-hhhhhccCCCCceee
Q 037961 31 TPKR--NLAWDVGT--RSGQAAASLAQ-IYQ-HVIATDTSPKQLKFAIK-LPNIRYQLTPTMSI-TELEQNVATQSSVDL 102 (262)
Q Consensus 31 ~~~~--~~vlDvGc--G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~ 102 (262)
..++ .+||-.|+ |.|..+..++. .|+ +|+++|.+++.++.+++ .............. ..+... ..+.+|+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~--~~~~~d~ 233 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRES--CPAGVDV 233 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHH--CTTCEEE
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHh--cCCCCCE
Confidence 4567 89999998 34777766665 588 99999999988888775 42212222211111 112222 1237999
Q ss_pred EEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 103 VTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 103 V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
|+.+.. ...++.+.++|+ +||+++++..
T Consensus 234 vi~~~G------~~~~~~~~~~l~-~~G~iv~~G~ 261 (357)
T 2zb4_A 234 YFDNVG------GNISDTVISQMN-ENSHIILCGQ 261 (357)
T ss_dssp EEESCC------HHHHHHHHHTEE-EEEEEEECCC
T ss_pred EEECCC------HHHHHHHHHHhc-cCcEEEEECC
Confidence 996655 267889999999 9999988553
No 357
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.38 E-value=0.014 Score=50.52 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=65.0
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhh-hhccCCCCceeeEEEcc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITEL-EQNVATQSSVDLVTIAS 107 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~V~~~~ 107 (262)
..++.+||-+|+|. |.++.++++ .|++|+++|.++.-++.+++...-.++..... .+. +.+ . +.+|+|+-..
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~--~~~~~~~--~-~~~D~vid~~ 251 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEE--GDWGEKY--F-DTFDLIVVCA 251 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGT--SCHHHHS--C-SCEEEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCc--hHHHHHh--h-cCCCEEEECC
Confidence 45788999999975 778888776 48899999999998888886532222322110 011 122 1 4799998554
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.-- ....++.+.++|+ +||+++.+..
T Consensus 252 g~~---~~~~~~~~~~~l~-~~G~iv~~g~ 277 (360)
T 1piw_A 252 SSL---TDIDFNIMPKAMK-VGGRIVSISI 277 (360)
T ss_dssp SCS---TTCCTTTGGGGEE-EEEEEEECCC
T ss_pred CCC---cHHHHHHHHHHhc-CCCEEEEecC
Confidence 320 0234567788999 9999988554
No 358
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.34 E-value=0.019 Score=48.55 Aligned_cols=87 Identities=16% Similarity=-0.022 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCcc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 32 PKRNLAWDVGTRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
+++.+||=.|+|. |.++.++++. |++|++++ +++-++.++++. ......+ .+.+ ...+|+|+-...-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lG-a~~v~~d------~~~v---~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRG-VRHLYRE------PSQV---TQKYFAIFDAVNS 209 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHT-EEEEESS------GGGC---CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcC-CCEEEcC------HHHh---CCCccEEEECCCc
Confidence 5789999999975 8888888874 88999999 999888888752 2322211 2223 5679999844321
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
..+..+.++|+ +||+++...
T Consensus 210 ------~~~~~~~~~l~-~~G~~v~~g 229 (315)
T 3goh_A 210 ------QNAAALVPSLK-ANGHIICIQ 229 (315)
T ss_dssp ----------TTGGGEE-EEEEEEEEC
T ss_pred ------hhHHHHHHHhc-CCCEEEEEe
Confidence 22356789999 999999864
No 359
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.26 E-value=0.038 Score=46.32 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
..++.+||-.|+ |.|..+.++++ .|++|++++.+++.++.+++...-....... ..+..+. + +.+|+|+- .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~~~~-~--~~~d~vid-~ 196 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAE--VPERAKA-W--GGLDLVLE-V 196 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGG--HHHHHHH-T--TSEEEEEE-C
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCc--chhHHHH-h--cCceEEEE-C
Confidence 567889999998 35778877776 4889999999999888887653222222110 0111111 1 56999986 4
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.- ..++.+.+.|+ +||+++.+..
T Consensus 197 g~------~~~~~~~~~l~-~~G~~v~~g~ 219 (302)
T 1iz0_A 197 RG------KEVEESLGLLA-HGGRLVYIGA 219 (302)
T ss_dssp SC------TTHHHHHTTEE-EEEEEEEC--
T ss_pred CH------HHHHHHHHhhc-cCCEEEEEeC
Confidence 32 46788999999 9999987553
No 360
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.23 E-value=0.085 Score=47.06 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch------------------hh
Q 037961 31 TPKRNLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI------------------TE 89 (262)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~------------------~~ 89 (262)
..++.+||=+|+ | .|.++.++++. |+++++++.++.-++.+++...-.++....... ..
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 357889999998 4 48888888774 899999999999999888753222222211000 11
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+..+. ....+|+|+-... ...+..+.++|+ +||++++...
T Consensus 306 i~~~t-~g~g~Dvvid~~G------~~~~~~~~~~l~-~~G~iv~~G~ 345 (456)
T 3krt_A 306 IRELT-GGEDIDIVFEHPG------RETFGASVFVTR-KGGTITTCAS 345 (456)
T ss_dssp HHHHH-TSCCEEEEEECSC------HHHHHHHHHHEE-EEEEEEESCC
T ss_pred HHHHh-CCCCCcEEEEcCC------chhHHHHHHHhh-CCcEEEEEec
Confidence 11111 2347999985433 257888999999 9999998654
No 361
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.17 E-value=0.063 Score=45.41 Aligned_cols=92 Identities=14% Similarity=0.039 Sum_probs=63.7
Q ss_pred eEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC
Q 037961 36 LAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF 112 (262)
Q Consensus 36 ~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~ 112 (262)
.||=.|+ | .|.++.++++. |++|++++.+++-++.+++...-..+...... .... +..+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~--~~~~~~d~v~d~~g---- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFA--ESRP--LEKQLWAGAIDTVG---- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSS--CCCS--SCCCCEEEEEESSC----
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHH--HHHh--hcCCCccEEEECCC----
Confidence 3899997 4 58888888875 88999999999999998875322233222110 0111 23457999885433
Q ss_pred ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 113 DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 113 d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
...++.+.+.|+ ++|+++.....
T Consensus 221 --~~~~~~~~~~l~-~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 --DKVLAKVLAQMN-YGGCVAACGLA 243 (324)
T ss_dssp --HHHHHHHHHTEE-EEEEEEECCCT
T ss_pred --cHHHHHHHHHHh-cCCEEEEEecC
Confidence 238899999999 99999986543
No 362
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.17 E-value=0.078 Score=45.35 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=64.8
Q ss_pred CCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 32 PKRNLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
.++.+||-+|+ | .|.++.++++. |++|+++ .+++-++.+++.. ...+..+.-....+.... ....+|+|+-+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG-a~~i~~~~~~~~~~~~~~-~~~g~D~vid~~g 225 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG-ATPIDASREPEDYAAEHT-AGQGFDLVYDTLG 225 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT-SEEEETTSCHHHHHHHHH-TTSCEEEEEESSC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC-CCEeccCCCHHHHHHHHh-cCCCceEEEECCC
Confidence 57889999994 4 48888888774 8899999 8999888888752 222332210011122221 2346999986543
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
...+..+.+.|+ +||++++...
T Consensus 226 ------~~~~~~~~~~l~-~~G~iv~~g~ 247 (343)
T 3gaz_A 226 ------GPVLDASFSAVK-RFGHVVSCLG 247 (343)
T ss_dssp ------THHHHHHHHHEE-EEEEEEESCC
T ss_pred ------cHHHHHHHHHHh-cCCeEEEEcc
Confidence 257889999999 9999988543
No 363
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.14 E-value=0.073 Score=44.77 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=53.3
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCCeE---EEEcCCHHHHHHHhc-CCCceEEeCC--CCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQHV---IATDTSPKQLKFAIK-LPNIRYQLTP--TMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v---~~vD~s~~~~~~a~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
...+++|+-||.|.++..+...|.++ .++|+++..++..+. .++..+..+| .+...++.. .+.+|+|+..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~----~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQE----WGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHH----TCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcc----cCCcCEEEec
Confidence 45689999999999999998888765 899999998886554 4555667777 332222221 1469999987
Q ss_pred cccc
Q 037961 107 SALH 110 (262)
Q Consensus 107 ~~~~ 110 (262)
..+.
T Consensus 91 pPCQ 94 (295)
T 2qrv_A 91 SPCN 94 (295)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 5544
No 364
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.11 E-value=0.033 Score=48.01 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=63.1
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHh-cCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAI-KLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++.+||-+|+|. |.++.++++ .|++|+++|.+++-++.++ +...-.++.... ...+... .+.+|+|+-...-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~---~~g~D~vid~~g~ 254 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSD--QAKMSEL---ADSLDYVIDTVPV 254 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTC--HHHHHHS---TTTEEEEEECCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeecccc--HHHHHHh---cCCCCEEEECCCC
Confidence 788999999875 777777776 4889999999998888877 442222222221 0112222 1369999854331
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
...++.+.++|+ +||+++.+..
T Consensus 255 -----~~~~~~~~~~l~-~~G~iv~~G~ 276 (357)
T 2cf5_A 255 -----HHALEPYLSLLK-LDGKLILMGV 276 (357)
T ss_dssp -----CCCSHHHHTTEE-EEEEEEECSC
T ss_pred -----hHHHHHHHHHhc-cCCEEEEeCC
Confidence 234677889999 9999998654
No 365
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.95 E-value=0.098 Score=44.65 Aligned_cols=88 Identities=15% Similarity=0.049 Sum_probs=59.4
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC--e-E-EEEcCCHHHHHHHhcC-CCceEEeCC--CCchhhhhhccCCCCceeeEEE
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ--H-V-IATDTSPKQLKFAIKL-PNIRYQLTP--TMSITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~--~-v-~~vD~s~~~~~~a~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~D~V~~ 105 (262)
...+++|+-||.|.++..+...|. + + .++|+++..++..+.+ +.. ...+| .+... ++ +...+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~---~i--~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIK---QI--ESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHH---HH--HHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHH---Hh--ccCCCCEEEe
Confidence 445799999999999999988873 5 5 6999999998876653 333 44455 22222 22 2236899998
Q ss_pred ccccccC------------Chh-HHHHHHHH-hhc
Q 037961 106 ASALHWF------------DLP-QFYKQVKW-VLK 126 (262)
Q Consensus 106 ~~~~~~~------------d~~-~~l~~~~r-~Lk 126 (262)
+..++-+ |.. .++.++.+ +++
T Consensus 83 gpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 83 SPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp CCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred cCCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 7665533 333 36777777 664
No 366
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.91 E-value=0.2 Score=41.13 Aligned_cols=118 Identities=11% Similarity=0.107 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCcccHhHHHHHhh---------CCeEEEEc-----CCH----------------------HHHHHHh---
Q 037961 32 PKRNLAWDVGTRSGQAAASLAQI---------YQHVIATD-----TSP----------------------KQLKFAI--- 72 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---------~~~v~~vD-----~s~----------------------~~~~~a~--- 72 (262)
.-...|+|+||-.|..+..++.. ..+|++.| +.+ +.++...
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34567899999999988886541 36899988 432 1122110
Q ss_pred ----c----CCCceEEeCC-CCchhhhhhc--cCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCc
Q 037961 73 ----K----LPNIRYQLTP-TMSITELEQN--VATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPE 141 (262)
Q Consensus 73 ----~----~~~~~~~~~~-~~~~~~~~~~--~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~ 141 (262)
. ..++.++.++ . ..+..+ ..+..++|+|....-. +-.....++.+...|+ |||++++=.+..+.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~---dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~-~GGvIv~DD~~~~~ 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVR---ETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLT-KGSIVAFDELDNPK 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHH---HHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEE-EEEEEEESSTTCTT
T ss_pred hhhhhcCCCCCcEEEEEecHH---HHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Confidence 1 1567888876 1 111111 0245679999976531 2244557899999999 99999995555444
Q ss_pred ccHHHHHhhccccc
Q 037961 142 INESVGAVFKPFDT 155 (262)
Q Consensus 142 ~~~~~~~~~~~~~~ 155 (262)
+. ..++.+.++..
T Consensus 223 w~-G~~~A~~ef~~ 235 (257)
T 3tos_A 223 WP-GENIAMRKVLG 235 (257)
T ss_dssp CT-HHHHHHHHHTC
T ss_pred Ch-HHHHHHHHHHh
Confidence 43 45566666554
No 367
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.81 E-value=0.071 Score=45.17 Aligned_cols=98 Identities=10% Similarity=-0.013 Sum_probs=62.9
Q ss_pred CCCCC-eEEEEcC--cccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 31 TPKRN-LAWDVGT--RSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~-~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
..++. +||-.|+ |.|..+.++++ .|++|++++.+++-++.+++...-..+............+ ..+.+|+|+-+
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~--~~~~~d~vid~ 223 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPL--DKQRWAAAVDP 223 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------C--CSCCEEEEEEC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHh--cCCcccEEEEC
Confidence 34553 7899997 45888888876 4889999999988888888753222222211000011111 23469999855
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..- ..++.+.+.|+ +||+++++..
T Consensus 224 ~g~------~~~~~~~~~l~-~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VGG------RTLATVLSRMR-YGGAVAVSGL 247 (328)
T ss_dssp STT------TTHHHHHHTEE-EEEEEEECSC
T ss_pred CcH------HHHHHHHHhhc-cCCEEEEEee
Confidence 431 35788899999 9999998654
No 368
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.77 E-value=0.11 Score=44.42 Aligned_cols=69 Identities=10% Similarity=-0.095 Sum_probs=48.8
Q ss_pred CCeEEEEcCcccHhHHHHHhhCCe-EEEEcCCHHHHHHHhcC-CCceEEeCCCCchhhhhhccC-CCCceeeEEEccccc
Q 037961 34 RNLAWDVGTRSGQAAASLAQIYQH-VIATDTSPKQLKFAIKL-PNIRYQLTPTMSITELEQNVA-TQSSVDLVTIASALH 110 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~D~V~~~~~~~ 110 (262)
..+++|+.||.|.++..+...|.+ +.++|+++..++..+.+ +... .+| +..+.. .-..+|+|+.+..++
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~--~~D------i~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP--EGD------ITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC--BSC------GGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC--cCC------HHHcCHhhCCCCCEEEECCCCC
Confidence 467999999999999999988876 66899999999877653 3322 344 222210 112589999876665
No 369
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.74 E-value=0.066 Score=46.30 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=63.0
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHh-cCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAI-KLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++.+||-+|+|. |..+.++++ .|++|++++.+++-++.++ +...-.++.... ...+... .+.+|+|+-....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~--~~~~~~~---~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRD--QEQMQAA---AGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTC--HHHHHHT---TTCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccC--HHHHHHh---hCCCCEEEECCCc
Confidence 778899999875 777777776 4889999999999888876 443222222211 1122222 1369999865432
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
...++.+.++|+ +||+++.+...
T Consensus 262 -----~~~~~~~~~~l~-~~G~iv~~g~~ 284 (366)
T 1yqd_A 262 -----VHPLLPLFGLLK-SHGKLILVGAP 284 (366)
T ss_dssp -----CCCSHHHHHHEE-EEEEEEECCCC
T ss_pred -----HHHHHHHHHHHh-cCCEEEEEccC
Confidence 124567888999 99999886543
No 370
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.69 E-value=0.048 Score=48.09 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=36.3
Q ss_pred CCCCeEEEEcCcccHhHHHHH-hhC---CeEEEEcCCHHHHHHHhc
Q 037961 32 PKRNLAWDVGTRSGQAAASLA-QIY---QHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~-~~~---~~v~~vD~s~~~~~~a~~ 73 (262)
+++.+++||||+.|..+..++ ..+ .+|+++|++|...+..++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 578899999999999999887 433 689999999999988764
No 371
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.58 E-value=0.28 Score=42.34 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=65.2
Q ss_pred CCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
.++.+||=+|+ | .|.++.++++. |++|+++. ++.-++.++++..-.++....... ..+..+ .++.+|+|+-..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~--t~g~~d~v~d~~ 239 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTY--TKNNLRYALDCI 239 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHH--TTTCCCEEEESS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHH--ccCCccEEEECC
Confidence 57788999998 3 68888888874 88999885 888888888764333443321111 112222 234599998543
Q ss_pred ccccCChhHHHHHHHHhh-cCCCeEEEEEe
Q 037961 108 ALHWFDLPQFYKQVKWVL-KKPSGVIAAWT 136 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~L-k~pgG~l~i~~ 136 (262)
. -...+..+.+.| + +||+++...
T Consensus 240 g-----~~~~~~~~~~~l~~-~~G~iv~~g 263 (371)
T 3gqv_A 240 T-----NVESTTFCFAAIGR-AGGHYVSLN 263 (371)
T ss_dssp C-----SHHHHHHHHHHSCT-TCEEEEESS
T ss_pred C-----chHHHHHHHHHhhc-CCCEEEEEe
Confidence 3 245788888999 8 899998754
No 372
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.57 E-value=0.11 Score=46.06 Aligned_cols=98 Identities=10% Similarity=-0.002 Sum_probs=65.8
Q ss_pred CCCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCC--CCc-----------------hh
Q 037961 31 TPKRNLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTP--TMS-----------------IT 88 (262)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~--~~~-----------------~~ 88 (262)
..++.+||=.|+ | .|..+.++++. |+++++++.+++-++.+++...-..+... .+. ..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 457889999997 4 47788777774 89999999999999988876322222211 100 01
Q ss_pred hhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 89 ELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.+.... ...+|+|+-+..- ..++.+.++|+ +||++++...
T Consensus 298 ~v~~~~--g~g~Dvvid~~G~------~~~~~~~~~l~-~~G~iv~~G~ 337 (447)
T 4a0s_A 298 LVVEKA--GREPDIVFEHTGR------VTFGLSVIVAR-RGGTVVTCGS 337 (447)
T ss_dssp HHHHHH--SSCCSEEEECSCH------HHHHHHHHHSC-TTCEEEESCC
T ss_pred HHHHHh--CCCceEEEECCCc------hHHHHHHHHHh-cCCEEEEEec
Confidence 111111 3469999865442 46788899999 9999998654
No 373
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.39 E-value=0.071 Score=45.66 Aligned_cols=87 Identities=11% Similarity=0.068 Sum_probs=60.2
Q ss_pred CeEEEEcCcccHhHHHHHhhCC--e-EEEEcCCHHHHHHHhc-CCCceEEeCC--CCchhhhhhccCCCCceeeEEEccc
Q 037961 35 NLAWDVGTRSGQAAASLAQIYQ--H-VIATDTSPKQLKFAIK-LPNIRYQLTP--TMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
.+++|+-||.|.++..+...|. + |.++|+++..++.-+. .+...+..+| .+...+ + +...+|+++.+..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~---~--~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQV---I--KKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHH---H--HHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHH---h--ccCCCCEEEecCC
Confidence 4689999999999999988774 4 6799999999887664 4666666666 222222 2 2236899998766
Q ss_pred cccC----------Chh-HHHHHHHHhhc
Q 037961 109 LHWF----------DLP-QFYKQVKWVLK 126 (262)
Q Consensus 109 ~~~~----------d~~-~~l~~~~r~Lk 126 (262)
++-+ |.. .++-++.++++
T Consensus 79 CQ~fS~ag~~~~~~d~r~~L~~~~~r~i~ 107 (333)
T 4h0n_A 79 CQPFTRNGKYLDDNDPRTNSFLYLIGILD 107 (333)
T ss_dssp CCCSEETTEECCTTCTTSCCHHHHHHHGG
T ss_pred CcchhhhhhccCCcCcccccHHHHHHHHH
Confidence 6532 222 36777777775
No 374
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.19 E-value=0.098 Score=44.78 Aligned_cols=95 Identities=8% Similarity=-0.045 Sum_probs=58.9
Q ss_pred CeEEEE-cCc-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEccccc
Q 037961 35 NLAWDV-GTR-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 35 ~~vlDv-GcG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+||=. |+| .|..+.++++ .|++|++++.+++-++.+++...-..+..+.... ..+.... ....+|+|+-+..-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~-~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVM-KAEQPRIFLDAVTG- 243 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHH-HHHCCCEEEESSCH-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHh-cCCCCcEEEECCCC-
Confidence 455543 555 3777777766 4899999999999998888753223333221111 1111111 12369999865442
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..+..+.+.|+ +||++++...
T Consensus 244 -----~~~~~~~~~l~-~~G~iv~~G~ 264 (349)
T 3pi7_A 244 -----PLASAIFNAMP-KRARWIIYGR 264 (349)
T ss_dssp -----HHHHHHHHHSC-TTCEEEECCC
T ss_pred -----hhHHHHHhhhc-CCCEEEEEec
Confidence 34578889999 9999998653
No 375
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.18 E-value=0.25 Score=41.71 Aligned_cols=92 Identities=21% Similarity=0.107 Sum_probs=61.1
Q ss_pred CCCCCeEEEEc-Ccc-cHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhh-hhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVG-TRS-GQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITE-LEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvG-cG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||=.| +|. |.++.++++. |++|++++ ++.-++.+++...-..+.... .+ +... -..+|+|+-.
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~---~~~~~~~---~~g~D~v~d~ 222 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHE---EDFLLAI---STPVDAVIDL 222 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTT---SCHHHHC---CSCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCC---cchhhhh---ccCCCEEEEC
Confidence 46788999886 664 8888888874 88999998 555577787653223333221 11 1111 1469999854
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.. ...+..+.++|+ +||+++...
T Consensus 223 ~g------~~~~~~~~~~l~-~~G~iv~~g 245 (321)
T 3tqh_A 223 VG------GDVGIQSIDCLK-ETGCIVSVP 245 (321)
T ss_dssp SC------HHHHHHHGGGEE-EEEEEEECC
T ss_pred CC------cHHHHHHHHhcc-CCCEEEEeC
Confidence 33 233488999999 999998854
No 376
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.03 E-value=0.2 Score=43.30 Aligned_cols=98 Identities=13% Similarity=-0.025 Sum_probs=62.3
Q ss_pred CCCCCeEEEEc-Cc-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 31 TPKRNLAWDVG-TR-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 31 ~~~~~~vlDvG-cG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
..++.+||=.| +| .|..+.++++. |++|++++ ++.-++.+++...-..+....... .+.+. ....+|+|+-+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~--~~~~~-~~~g~D~vid~~ 256 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSV--EEQLK-SLKPFDFILDNV 256 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCH--HHHHH-TSCCBSEEEESS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHH--HHHHh-hcCCCCEEEECC
Confidence 45778999999 45 48888888764 88999998 777788887653222232221111 11111 124699998553
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.- ....++.+.+.|+ +||+++.+..
T Consensus 257 g~----~~~~~~~~~~~l~-~~G~iv~~g~ 281 (375)
T 2vn8_A 257 GG----STETWAPDFLKKW-SGATYVTLVT 281 (375)
T ss_dssp CT----THHHHGGGGBCSS-SCCEEEESCC
T ss_pred CC----hhhhhHHHHHhhc-CCcEEEEeCC
Confidence 31 1235577788999 9999988653
No 377
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.91 E-value=0.12 Score=44.52 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=61.3
Q ss_pred CCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCH---HHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 34 RNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSP---KQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
+.+||-+|+|. |..+.++++ .|++|+++|.++ +-++.+++.. ......+.+. ..+... . +.+|+|+.+..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g-a~~v~~~~~~-~~~~~~--~-~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK-TNYYNSSNGY-DKLKDS--V-GKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT-CEEEECTTCS-HHHHHH--H-CCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC-CceechHHHH-HHHHHh--C-CCCCEEEECCC
Confidence 88999999864 666666665 488999999998 7777777542 2222211110 112221 1 56999986544
Q ss_pred cccCChhHHH-HHHHHhhcCCCeEEEEEec
Q 037961 109 LHWFDLPQFY-KQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 109 ~~~~d~~~~l-~~~~r~Lk~pgG~l~i~~~ 137 (262)
. ...+ +.+.++|+ +||+++++..
T Consensus 256 ~-----~~~~~~~~~~~l~-~~G~iv~~g~ 279 (366)
T 2cdc_A 256 A-----DVNILGNVIPLLG-RNGVLGLFGF 279 (366)
T ss_dssp C-----CTHHHHHHGGGEE-EEEEEEECSC
T ss_pred C-----hHHHHHHHHHHHh-cCCEEEEEec
Confidence 2 2356 88999999 9999988654
No 378
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.74 E-value=0.091 Score=44.53 Aligned_cols=98 Identities=10% Similarity=0.014 Sum_probs=63.4
Q ss_pred CCCCC-eEEEEcC-c-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 31 TPKRN-LAWDVGT-R-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~-~vlDvGc-G-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
..++. .||-.|+ | .|..+.++++ .|++|++++.+++-++.+++...-..+..+......... ...+.+|+|+-+
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~--~~~~~~d~vid~ 224 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKA--LSKQQWQGAVDP 224 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCS--SCCCCEEEEEES
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHH--hhcCCccEEEEC
Confidence 34554 7999997 4 4888888776 489999999998888888764222222111000000111 123469999855
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ...+..+.+.|+ +||+++++..
T Consensus 225 ~g------~~~~~~~~~~l~-~~G~iv~~G~ 248 (330)
T 1tt7_A 225 VG------GKQLASLLSKIQ-YGGSVAVSGL 248 (330)
T ss_dssp CC------THHHHHHHTTEE-EEEEEEECCC
T ss_pred Cc------HHHHHHHHHhhc-CCCEEEEEec
Confidence 43 147889999999 9999998654
No 379
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.62 E-value=0.053 Score=45.77 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=29.5
Q ss_pred CCCCceeeEEEccccccCCh----hHHHHHHHHhhcCCCeEEEEEec
Q 037961 95 ATQSSVDLVTIASALHWFDL----PQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~d~----~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+++..+|+|+-..--.--+| +.+++.++++++ |||+|+-|+.
T Consensus 182 l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~-pgg~laTYta 227 (308)
T 3vyw_A 182 VENFKADAVFHDAFSPYKNPELWTLDFLSLIKERID-EKGYWVSYSS 227 (308)
T ss_dssp CCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEE-EEEEEEESCC
T ss_pred hcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhC-CCcEEEEEeC
Confidence 34568999986432221233 458999999999 9999987554
No 380
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.62 E-value=0.2 Score=42.46 Aligned_cols=69 Identities=7% Similarity=-0.055 Sum_probs=49.4
Q ss_pred eEEEEcCcccHhHHHHHhhCCeEE-EEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccC-CCCceeeEEEccccc
Q 037961 36 LAWDVGTRSGQAAASLAQIYQHVI-ATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVA-TQSSVDLVTIASALH 110 (262)
Q Consensus 36 ~vlDvGcG~G~~~~~l~~~~~~v~-~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~V~~~~~~~ 110 (262)
.|+|+-||.|.++..+.+.|.+++ ++|+++..++.-+.+-.-....+| +.++.. .-..+|+++....++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~D------I~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGD------ISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESC------GGGCCGGGSCCCSEEECCCCGG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCC------hhhCCHhhCCcccEEEecCCCC
Confidence 589999999999999988887654 999999999876654334566666 222110 113589999876654
No 381
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.44 E-value=0.24 Score=46.45 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=62.0
Q ss_pred CCCeEEEEcCcccHhHHHHHhh------------C--CeEEEEcC---CHHHHHHHhc-CC------------------C
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI------------Y--QHVIATDT---SPKQLKFAIK-LP------------------N 76 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~------------~--~~v~~vD~---s~~~~~~a~~-~~------------------~ 76 (262)
+.-+|+|+|-|+|......... . -+++++|. +++.+..+-. .+ +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4458999999999877665432 1 25899999 8888774432 11 1
Q ss_pred c---eEEeCC---CCchhhhhhc-c-CC---CCceeeEEEccccccCC----hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 77 I---RYQLTP---TMSITELEQN-V-AT---QSSVDLVTIASALHWFD----LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 77 ~---~~~~~~---~~~~~~~~~~-~-~~---~~~~D~V~~~~~~~~~d----~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+ .+..+. .+-++|+.+. + +. ...||+|+...--.-.+ ...+++.++++++ |||+++.++..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~-~g~~~~t~~~~ 221 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLATFTSA 221 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEE-EEEEEEESCCC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhC-CCCEEEeccCc
Confidence 1 111111 1222344332 1 11 46799998643221112 2448899999999 99999875543
No 382
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.36 E-value=0.91 Score=33.09 Aligned_cols=95 Identities=14% Similarity=0.013 Sum_probs=59.1
Q ss_pred CCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 34 RNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
.++|+=+|||. |. ++..|.+.+.+|+++|.+++.++.+++ .++.++.+|.......+... -..+|+|++...-.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~--i~~ad~vi~~~~~~- 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAH--LECAKWLILTIPNG- 82 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTT--GGGCSEEEECCSCH-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcC--cccCCEEEEECCCh-
Confidence 35688889875 43 334455568999999999999988876 46777877722212222222 24689888653311
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.....+....+.+. |+..++.
T Consensus 83 -~~n~~~~~~a~~~~-~~~~iia 103 (140)
T 3fwz_A 83 -YEAGEIVASARAKN-PDIEIIA 103 (140)
T ss_dssp -HHHHHHHHHHHHHC-SSSEEEE
T ss_pred -HHHHHHHHHHHHHC-CCCeEEE
Confidence 01113444566777 7877665
No 383
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.34 E-value=0.047 Score=45.84 Aligned_cols=55 Identities=18% Similarity=0.247 Sum_probs=38.1
Q ss_pred CCceEEeCCCCchhhhhh-c-cCCCCceeeEEEcccccc--------------------C-ChhHHHHHHHHhhcCCCeE
Q 037961 75 PNIRYQLTPTMSITELEQ-N-VATQSSVDLVTIASALHW--------------------F-DLPQFYKQVKWVLKKPSGV 131 (262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~D~V~~~~~~~~--------------------~-d~~~~l~~~~r~Lk~pgG~ 131 (262)
..+.++++| ..+ + .+++++||+|+++....- + ....+++++.++|| |||.
T Consensus 20 ~~~~i~~gD------~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk-~~G~ 92 (297)
T 2zig_A 20 GVHRLHVGD------AREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV-PGGR 92 (297)
T ss_dssp -CEEEEESC------HHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEE
T ss_pred cCCEEEECc------HHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC-CCcE
Confidence 345677776 222 2 146789999999877642 2 23457889999999 9999
Q ss_pred EEEEe
Q 037961 132 IAAWT 136 (262)
Q Consensus 132 l~i~~ 136 (262)
++++.
T Consensus 93 l~i~~ 97 (297)
T 2zig_A 93 LVIVV 97 (297)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98854
No 384
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.76 E-value=0.83 Score=38.53 Aligned_cols=100 Identities=14% Similarity=0.037 Sum_probs=64.7
Q ss_pred CeEEEEcCcccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcC---------CCceEEeCC-CCchh-hhhhccCCCCceee
Q 037961 35 NLAWDVGTRSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKL---------PNIRYQLTP-TMSIT-ELEQNVATQSSVDL 102 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~ 102 (262)
..|+++|||-=.....+.. .+..++-+| .|..++..++. .+..++..| .-... .+..-++....--+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 4699999998877777663 357899999 57877765531 345556565 11111 11122233445567
Q ss_pred EEEccccccCChhH---HHHHHHHhhcCCCeEEEEEe
Q 037961 103 VTIASALHWFDLPQ---FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 103 V~~~~~~~~~d~~~---~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++-..+|+++++. +++.+...+. ||+.|++-.
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~-~gs~l~~d~ 218 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSA-VGSRIAVET 218 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCC-TTCEEEEEC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCC-CCeEEEEEe
Confidence 78888999995544 6777777777 888888733
No 385
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.00 E-value=0.43 Score=44.79 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=61.3
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC--------------CeEEEEcC---CHHHHHHHhcC-------------------CC
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY--------------QHVIATDT---SPKQLKFAIKL-------------------PN 76 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--------------~~v~~vD~---s~~~~~~a~~~-------------------~~ 76 (262)
+.-+|+|+|.|+|.....+.+.. -+++.+|. +.+.+..+-+. ++
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999998877664421 36899998 66666543210 11
Q ss_pred c---eEEeCC---CCchhhhhh-cc-CC---CCceeeEEEccccccCC----hhHHHHHHHHhhcCCCeEEEEEec
Q 037961 77 I---RYQLTP---TMSITELEQ-NV-AT---QSSVDLVTIASALHWFD----LPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 77 ~---~~~~~~---~~~~~~~~~-~~-~~---~~~~D~V~~~~~~~~~d----~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+ .+..+. .+-++|+.+ ++ +. ++.+|.++....-.-.+ ...++..+.++++ |||++..+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~-~g~~~~t~~~ 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTR-PGGTFSTFTA 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEE-EEEEEEESCC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhC-CCCEEEeccC
Confidence 1 111111 122344543 22 12 46899998643211112 2558999999999 9999887544
No 386
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.92 E-value=2.2 Score=30.41 Aligned_cols=94 Identities=14% Similarity=0.024 Sum_probs=53.5
Q ss_pred CeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC
Q 037961 35 NLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF 112 (262)
Q Consensus 35 ~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~ 112 (262)
..|+=+|+|. |. ++..|.+.+.+|+++|.+++.++..++..++.+..++.......... .-..+|+|+....-.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~--~~~~~d~vi~~~~~~-- 80 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA--GIEDADMYIAVTGKE-- 80 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT--TTTTCSEEEECCSCH--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHc--CcccCCEEEEeeCCc--
Confidence 5678888764 32 23344456889999999999887665433566666551111112111 124589998764322
Q ss_pred ChhHHHHHHHHhhcCCCeEEEE
Q 037961 113 DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 113 d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.....+.++.+.+. ++ .+++
T Consensus 81 ~~~~~~~~~~~~~~-~~-~ii~ 100 (140)
T 1lss_A 81 EVNLMSSLLAKSYG-IN-KTIA 100 (140)
T ss_dssp HHHHHHHHHHHHTT-CC-CEEE
T ss_pred hHHHHHHHHHHHcC-CC-EEEE
Confidence 12234555666677 65 4444
No 387
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.89 E-value=1.9 Score=36.30 Aligned_cols=89 Identities=20% Similarity=0.261 Sum_probs=58.4
Q ss_pred CeEEEEcCcc--cHhHHHHHhhCC--eEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 35 NLAWDVGTRS--GQAAASLAQIYQ--HVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+|.=||+|. +.++..|.+.|. +|++.|.+++.++.+.+...+.....+ .++. .-...|+|+.+-...
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~------~~~~--~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS------IAKV--EDFSPDFVMLSSPVR 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC------TTGG--GGGCCSEEEECSCGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC------HHHH--hhccCCEEEEeCCHH
Confidence 5788899986 455667777787 999999999988888765322111111 1110 012479998765443
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEE
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
....+++++...|+ ||.+++-
T Consensus 106 --~~~~vl~~l~~~l~-~~~iv~d 126 (314)
T 3ggo_A 106 --TFREIAKKLSYILS-EDATVTD 126 (314)
T ss_dssp --GHHHHHHHHHHHSC-TTCEEEE
T ss_pred --HHHHHHHHHhhccC-CCcEEEE
Confidence 34567888888898 7776553
No 388
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.71 E-value=0.59 Score=41.98 Aligned_cols=78 Identities=10% Similarity=0.021 Sum_probs=51.8
Q ss_pred CeEEEEcCcccHhHHHHHhhCCe-EEEEcCCHHHHHHHhcC----CCceEEeCCC--Cchhhh---------hhccCCCC
Q 037961 35 NLAWDVGTRSGQAAASLAQIYQH-VIATDTSPKQLKFAIKL----PNIRYQLTPT--MSITEL---------EQNVATQS 98 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~----~~~~~~~~~~--~~~~~~---------~~~~~~~~ 98 (262)
-+++|+-||.|.++..+...|.+ |.++|+++..++.-+.+ +...+..+|. +...+. +.+.-..+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~ 168 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIP 168 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSC
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCC
Confidence 57899999999999999888776 67999999988866542 4556666661 110000 00000123
Q ss_pred ceeeEEEccccccC
Q 037961 99 SVDLVTIASALHWF 112 (262)
Q Consensus 99 ~~D~V~~~~~~~~~ 112 (262)
.+|+|+....+.-+
T Consensus 169 ~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 169 EHDVLLAGFPCQPF 182 (482)
T ss_dssp CCSEEEEECCCCCC
T ss_pred CCCEEEecCCCcch
Confidence 58999987776644
No 389
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.38 E-value=1.2 Score=32.20 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=46.7
Q ss_pred CCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 34 RNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
..+++=+|||. |. ++..|.+.|.+|+++|.+++.++.+++. ++.+..+|........... -..+|+|++...
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~--~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLD--LEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSC--CTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCC--cccCCEEEEecC
Confidence 35688899865 33 3334455689999999999998887754 5677777722222233332 346899887544
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.94 E-value=3 Score=31.59 Aligned_cols=96 Identities=14% Similarity=-0.042 Sum_probs=56.6
Q ss_pred CCeEEEEcCcc-cHh-HHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhc-cCCCCceeeEEEcccc
Q 037961 34 RNLAWDVGTRS-GQA-AASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQN-VATQSSVDLVTIASAL 109 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~V~~~~~~ 109 (262)
++.|+=+|||. |.. +..|... +.+|+++|.+++.++.+++. ++....++..+....... . -..+|+|+....-
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-g~~~~~gd~~~~~~l~~~~~--~~~ad~vi~~~~~ 115 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-GRNVISGDATDPDFWERILD--TGHVKLVLLAMPH 115 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-TCCEEECCTTCHHHHHTBCS--CCCCCEEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-CCCEEEcCCCCHHHHHhccC--CCCCCEEEEeCCC
Confidence 45788899875 433 3445567 89999999999988887754 566666652111112222 2 2458999874331
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
......+-...+-+. |++.++.-
T Consensus 116 --~~~~~~~~~~~~~~~-~~~~ii~~ 138 (183)
T 3c85_A 116 --HQGNQTALEQLQRRN-YKGQIAAI 138 (183)
T ss_dssp --HHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred --hHHHHHHHHHHHHHC-CCCEEEEE
Confidence 111123334555566 67676653
No 391
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.59 E-value=0.2 Score=42.60 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=33.4
Q ss_pred CCCCceeeEEEcccccc--------------C-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 95 ATQSSVDLVTIASALHW--------------F-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~--------------~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+++++||+|++.....- + ....+++++.++|+ |||.++++..
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk-~~G~i~i~~~ 85 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLK-PDGSFVVDFG 85 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCc-CCcEEEEEEC
Confidence 46789999999866532 2 35678999999999 9999998554
No 392
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.19 E-value=2.2 Score=31.45 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCcc-cHh-HHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 32 PKRNLAWDVGTRS-GQA-AASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
.+...|+=+|||. |.. +..|...+.+|+++|.++..++.++...+.....++.......... .-..+|+|+....
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~--~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKEC--GMEKADMVFAFTN 93 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTT--TGGGCSEEEECSS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHc--CcccCCEEEEEeC
Confidence 3567889999875 433 3344456889999999988776655223455665551111112211 1235899987643
No 393
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.94 E-value=0.88 Score=38.89 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=56.8
Q ss_pred CCCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEE-EcCCH---HHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeE
Q 037961 31 TPKRNLAWDVGT-R-SGQAAASLAQI-YQHVIA-TDTSP---KQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~-vD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
..++.+||=.|+ | .|.++.++++. |+++++ ++.++ +.++.+++...-.++..+.....++....-..+.+|+|
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvv 244 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLA 244 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEE
Confidence 467889999997 4 58888888874 887665 44543 23556665532222221100001122211111248999
Q ss_pred EEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 104 TIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 104 ~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+-... .....++.++|+ +||+++++.
T Consensus 245 id~~g------~~~~~~~~~~l~-~~G~iv~~G 270 (357)
T 1zsy_A 245 LNCVG------GKSSTELLRQLA-RGGTMVTYG 270 (357)
T ss_dssp EESSC------HHHHHHHHTTSC-TTCEEEECC
T ss_pred EECCC------cHHHHHHHHhhC-CCCEEEEEe
Confidence 85432 122356789999 999998864
No 394
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.30 E-value=1.8 Score=39.02 Aligned_cols=92 Identities=13% Similarity=0.041 Sum_probs=58.7
Q ss_pred CCCCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 31 TPKRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
..++.+|+=+|+|. |......++ .|.+|+++|+++.-++.+++. ++.+. + ..++ + ...|+|+....
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-Ga~~~--~---l~e~--l----~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME-GFDVV--T---VEEA--I----GDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC--C---HHHH--G----GGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCEEe--c---HHHH--H----hCCCEEEECCC
Confidence 45778999999975 554444443 588999999999888777654 33321 1 1111 1 35799987543
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
-..+ +-.+..+.|| +||+++......
T Consensus 339 t~~~----i~~~~l~~mk-~ggilvnvG~~~ 364 (494)
T 3ce6_A 339 NKDI----IMLEHIKAMK-DHAILGNIGHFD 364 (494)
T ss_dssp SSCS----BCHHHHHHSC-TTCEEEECSSSG
T ss_pred CHHH----HHHHHHHhcC-CCcEEEEeCCCC
Confidence 2221 1135677899 999998755443
No 395
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.10 E-value=1.3 Score=38.15 Aligned_cols=90 Identities=10% Similarity=0.054 Sum_probs=58.0
Q ss_pred CCeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 34 RNLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
..+|.=||+|. | ..+..|++.|.+|++.|.+++-++.+.+. ++.... +.++..-.....|+|+..-.-.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~-------s~~e~~~~a~~~DvVi~~vp~~- 92 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIAGAR-------SIEEFCAKLVKPRVVWLMVPAA- 92 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCBCCS-------SHHHHHHHSCSSCEEEECSCGG-
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCEEeC-------CHHHHHhcCCCCCEEEEeCCHH-
Confidence 35688899885 3 34556677899999999999988877654 222211 1111110112459998765544
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
..+.++.++...|+ +|.+++-
T Consensus 93 -~v~~vl~~l~~~l~-~g~iiId 113 (358)
T 4e21_A 93 -VVDSMLQRMTPLLA-ANDIVID 113 (358)
T ss_dssp -GHHHHHHHHGGGCC-TTCEEEE
T ss_pred -HHHHHHHHHHhhCC-CCCEEEe
Confidence 56667888888888 7766554
No 396
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.91 E-value=0.82 Score=38.94 Aligned_cols=96 Identities=17% Similarity=0.029 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcC-c-ccHhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 31 TPKRNLAWDVGT-R-SGQAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
..++.+||=.|+ | .|.++.++++. +.+|++++ ++.-.+.++ ...-.++..+.-....+... ..+.+|+|+-.
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~--~~~g~Dvv~d~ 215 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRI--SAEGVDIVLDC 215 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHH--CTTCEEEEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHh--cCCCceEEEEC
Confidence 357889999998 3 48888888875 46899988 666666666 32222222221001222222 24579999954
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..- ..+..+.++|+ +||+++++..
T Consensus 216 ~g~------~~~~~~~~~l~-~~G~~v~~G~ 239 (349)
T 4a27_A 216 LCG------DNTGKGLSLLK-PLGTYILYGS 239 (349)
T ss_dssp CC-------------CTTEE-EEEEEEEEC-
T ss_pred CCc------hhHHHHHHHhh-cCCEEEEECC
Confidence 331 23477889999 9999998664
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.81 E-value=0.24 Score=43.09 Aligned_cols=97 Identities=21% Similarity=0.168 Sum_probs=57.0
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhc-C-CCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIK-L-PNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+|+=+|+|. |......+. .|++|+++|.++.-++.+++ . ..+.....+ ..++...- ..+|+|+....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~---~~~l~~~l---~~aDvVi~~~~ 240 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSS---AYELEGAV---KRADLVIGAVL 240 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECC---HHHHHHHH---HHCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCC---HHHHHHHH---cCCCEEEECCC
Confidence 467899999975 544444443 58899999999998877765 2 122121111 11222211 25799987433
Q ss_pred cccCCh-hHHHHHHHHhhcCCCeEEEEEe
Q 037961 109 LHWFDL-PQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 109 ~~~~d~-~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
....+. .-+.+++.+.|| |||+++-..
T Consensus 241 ~p~~~t~~li~~~~l~~mk-~g~~iV~va 268 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMK-PGAVLVDIA 268 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSC-TTCEEEEGG
T ss_pred cCCCCCcceecHHHHhcCC-CCcEEEEEe
Confidence 222111 113567778899 999987644
No 398
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.74 E-value=4.4 Score=35.52 Aligned_cols=95 Identities=15% Similarity=0.044 Sum_probs=61.1
Q ss_pred CCeEEEEcCcc-cHh-HHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 34 RNLAWDVGTRS-GQA-AASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
.++|+=+|+|. |.. +..|...+.+|+++|.+++.++.+++. ++.++.+|......++..++ ...|+|++...-
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-g~~vi~GDat~~~~L~~agi--~~A~~viv~~~~-- 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-GMKVFYGDATRMDLLESAGA--AKAEVLINAIDD-- 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-TCCCEESCTTCHHHHHHTTT--TTCSEEEECCSS--
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-CCeEEEcCCCCHHHHHhcCC--CccCEEEECCCC--
Confidence 45678888874 433 334445689999999999999988864 56778787322223333433 457888875431
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
-.....+....+-+. |+..+++
T Consensus 79 ~~~n~~i~~~ar~~~-p~~~Iia 100 (413)
T 3l9w_A 79 PQTNLQLTEMVKEHF-PHLQIIA 100 (413)
T ss_dssp HHHHHHHHHHHHHHC-TTCEEEE
T ss_pred hHHHHHHHHHHHHhC-CCCeEEE
Confidence 112225566777788 8877766
No 399
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.64 E-value=0.85 Score=39.96 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=59.0
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCC-----------CCc-----------hh
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTP-----------TMS-----------IT 88 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----------~~~-----------~~ 88 (262)
++.+|+=+|+|. |.....++. .|++|+++|.++.-++.+++. +..+...+ .+. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 567899999986 655555544 589999999999988888764 33332210 000 00
Q ss_pred hhhhccCCCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEEE
Q 037961 89 ELEQNVATQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
++.+. -...|+|+..-.+.-- .+.-+-+++.+.+| ||.+++=.
T Consensus 268 ~l~e~---l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk-~GsVIVDv 311 (405)
T 4dio_A 268 LVAEH---IAKQDIVITTALIPGRPAPRLVTREMLDSMK-PGSVVVDL 311 (405)
T ss_dssp HHHHH---HHTCSEEEECCCCSSSCCCCCBCHHHHTTSC-TTCEEEET
T ss_pred HHHHH---hcCCCEEEECCcCCCCCCCEEecHHHHhcCC-CCCEEEEE
Confidence 11111 1357999864322211 22224578889999 89988753
No 400
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=88.58 E-value=0.59 Score=40.43 Aligned_cols=74 Identities=8% Similarity=0.006 Sum_probs=44.6
Q ss_pred CCCCeEEEEc--Cc-ccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEc
Q 037961 32 PKRNLAWDVG--TR-SGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 32 ~~~~~vlDvG--cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~ 106 (262)
.++.+||=+| +| .|.++.++++ .|++|++++.+++-++.+++...-.++....... ..+.... ....+|+|+-+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t-~~~g~d~v~d~ 247 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEAL-VSTGATIAFDA 247 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHH-HHHCCCEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHh-cCCCceEEEEC
Confidence 4667778884 44 3666666766 4899999999999999998764333333321111 1111111 12358999854
No 401
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.00 E-value=0.33 Score=42.00 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=55.5
Q ss_pred CCCeEEEEcCcc-cHhHHHH-HhhCCeEEEEcCCHHHHHHHhc-CC-CceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRS-GQAAASL-AQIYQHVIATDTSPKQLKFAIK-LP-NIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.+|+=+|+|. |...... ...|++|+++|.++.-++.+.+ .. .+.....+ ..+++..- ..+|+|+.+-.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~---~~~l~~~~---~~~DvVi~~~g 238 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTAT---EANIKKSV---QHADLLIGAVL 238 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECC---HHHHHHHH---HHCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCC---HHHHHHHH---hCCCEEEECCC
Confidence 357889999864 4443333 3458899999999988877654 21 11111111 12222221 25899987554
Q ss_pred cccC-ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 109 LHWF-DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 109 ~~~~-d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.... .+.-+.+++.+.+| +||+++...
T Consensus 239 ~~~~~~~~li~~~~l~~mk-~gg~iV~v~ 266 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMK-EGAVIVDVA 266 (369)
T ss_dssp -------CCSCHHHHTTSC-TTCEEEECC
T ss_pred CCccccchhHHHHHHHhhc-CCCEEEEEe
Confidence 3321 11123567788899 999887644
No 402
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=87.97 E-value=2.2 Score=36.34 Aligned_cols=99 Identities=17% Similarity=0.100 Sum_probs=62.5
Q ss_pred hCCCCCeEEEEcCcc-cHhHHHHHh-h-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 30 KTPKRNLAWDVGTRS-GQAAASLAQ-I-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 30 ~~~~~~~vlDvGcG~-G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
...++.+||=+|+|. |.++.++++ . |++|+++|.+++-++.+++...-.++.........+..+. ....+|+|+-.
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~-~g~g~Dvvid~ 261 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELT-RGRGVNVAMDF 261 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHT-TTCCEEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHh-CCCCCcEEEEC
Confidence 356788999999874 667777766 5 8899999999999999887633233332211011222221 12369999854
Q ss_pred cccccCChhH--HHHHHHHhhcCCCeEEEEEec
Q 037961 107 SALHWFDLPQ--FYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 107 ~~~~~~d~~~--~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.. ... .++.+.++ +||+++++..
T Consensus 262 ~G-----~~~~~~~~~~~~~---~~G~~v~~g~ 286 (359)
T 1h2b_A 262 VG-----SQATVDYTPYLLG---RMGRLIIVGY 286 (359)
T ss_dssp SC-----CHHHHHHGGGGEE---EEEEEEECCC
T ss_pred CC-----CchHHHHHHHhhc---CCCEEEEEeC
Confidence 33 122 55666666 4899888654
No 403
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.96 E-value=1.3 Score=36.63 Aligned_cols=88 Identities=26% Similarity=0.163 Sum_probs=54.2
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcC------------------------CCceEEeCCCCchh
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKL------------------------PNIRYQLTPTMSIT 88 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------------------------~~~~~~~~~~~~~~ 88 (262)
.+|.=||+|+ | ..+..++..|.+|+..|.+++.++.+.+. .++... .
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~------ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-D------ 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-S------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-C------
Confidence 4577788886 2 34555667799999999999988876532 011111 1
Q ss_pred hhhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEE
Q 037961 89 ELEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~ 133 (262)
+.++. -...|+|+.+-.-..--...+++++...++ |+..++
T Consensus 78 ~~~~~---~~~aDlVi~av~~~~~~~~~v~~~l~~~~~-~~~il~ 118 (283)
T 4e12_A 78 DLAQA---VKDADLVIEAVPESLDLKRDIYTKLGELAP-AKTIFA 118 (283)
T ss_dssp CHHHH---TTTCSEEEECCCSCHHHHHHHHHHHHHHSC-TTCEEE
T ss_pred CHHHH---hccCCEEEEeccCcHHHHHHHHHHHHhhCC-CCcEEE
Confidence 11111 134799986643221123457888888998 776654
No 404
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.84 E-value=0.91 Score=38.80 Aligned_cols=100 Identities=8% Similarity=0.053 Sum_probs=56.8
Q ss_pred CCCC-CeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHH----HHHHhcCCCceEEeCCC---Cch-hhhhhccC-CC
Q 037961 31 TPKR-NLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQ----LKFAIKLPNIRYQLTPT---MSI-TELEQNVA-TQ 97 (262)
Q Consensus 31 ~~~~-~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~----~~~a~~~~~~~~~~~~~---~~~-~~~~~~~~-~~ 97 (262)
.+++ .+||=.|+ | .|.++.++++. |++++++.-+++. .+.++++..-.++..+. ... ..+..... ..
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence 4577 89999997 4 48888888874 8898887644332 34455432112221110 000 01111100 12
Q ss_pred CceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 98 SSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 98 ~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
..+|+|+-... -..+. .+.++|+ +||+++++..
T Consensus 244 ~g~Dvvid~~G-----~~~~~-~~~~~l~-~~G~~v~~g~ 276 (364)
T 1gu7_A 244 GEAKLALNCVG-----GKSST-GIARKLN-NNGLMLTYGG 276 (364)
T ss_dssp CCEEEEEESSC-----HHHHH-HHHHTSC-TTCEEEECCC
T ss_pred CCceEEEECCC-----chhHH-HHHHHhc-cCCEEEEecC
Confidence 46999985433 12333 7789999 9999998654
No 405
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=87.71 E-value=0.83 Score=43.75 Aligned_cols=97 Identities=20% Similarity=0.098 Sum_probs=59.3
Q ss_pred CCCCeEEEEcC-c-ccHhHHHHHhh-CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCch-hhhhhccCCCCceeeEEEcc
Q 037961 32 PKRNLAWDVGT-R-SGQAAASLAQI-YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSI-TELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~V~~~~ 107 (262)
.++.+||=.|+ | .|..+.++++. |++|++++.++. .+.++ ...-.+......++ ..+.... ....+|+|+-+.
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~-lga~~v~~~~~~~~~~~i~~~t-~g~GvDvVld~~ 420 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE-LSREHLASSRTCDFEQQFLGAT-GGRGVDVVLNSL 420 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC-SCGGGEECSSSSTHHHHHHHHS-CSSCCSEEEECC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh-cChhheeecCChhHHHHHHHHc-CCCCeEEEEECC
Confidence 57888999985 4 58899999885 899999986642 22222 21111222111111 1122221 234699999643
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+ ...+....++|+ |||+++.....
T Consensus 421 g------g~~~~~~l~~l~-~~Gr~v~iG~~ 444 (795)
T 3slk_A 421 A------GEFADASLRMLP-RGGRFLELGKT 444 (795)
T ss_dssp C------TTTTHHHHTSCT-TCEEEEECCST
T ss_pred C------cHHHHHHHHHhc-CCCEEEEeccc
Confidence 2 245688899999 99999986643
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.68 E-value=4 Score=33.30 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=53.3
Q ss_pred eEEEEcCcc-c-HhHHHHHhhCC--eEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCC-ceeeEEEccccc
Q 037961 36 LAWDVGTRS-G-QAAASLAQIYQ--HVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQS-SVDLVTIASALH 110 (262)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~V~~~~~~~ 110 (262)
+|.=||+|. | .++..++..|. +|+++|.+++.++.+++..-......+ .++. -. ..|+|+..-...
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~------~~~~---~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS------IAKV---EDFSPDFVMLSSPVR 73 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC------GGGG---GGTCCSEEEECSCHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCC------HHHH---hcCCCCEEEEcCCHH
Confidence 467788886 3 34445566676 899999999988877654211111111 1111 12 579998764433
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEE
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
....++.++...++ ++..++.
T Consensus 74 --~~~~v~~~l~~~l~-~~~iv~~ 94 (281)
T 2g5c_A 74 --TFREIAKKLSYILS-EDATVTD 94 (281)
T ss_dssp --HHHHHHHHHHHHSC-TTCEEEE
T ss_pred --HHHHHHHHHHhhCC-CCcEEEE
Confidence 23456777888888 8876554
No 407
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.60 E-value=0.54 Score=40.86 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=58.8
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCC-------CCc----h----hhhhhccC
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTP-------TMS----I----TELEQNVA 95 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-------~~~----~----~~~~~~~~ 95 (262)
++.+|+=+|+|. |..+..++. .|++|+++|.++.-++.+.+. +..+...+ ... . ...+.+.-
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 567889999985 555554444 599999999999988888764 33332210 000 0 00111110
Q ss_pred CCCceeeEEEccccccC-ChhHHHHHHHHhhcCCCeEEEE
Q 037961 96 TQSSVDLVTIASALHWF-DLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 96 ~~~~~D~V~~~~~~~~~-d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.-...|+|+..-...-- .+.-+-+++.+.+| ||++++=
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk-pGsVIVD 300 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQ-PGSVVVD 300 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC-TTCEEEE
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCC-CCcEEEE
Confidence 12468999965322211 12224478889999 8988775
No 408
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.24 E-value=3.6 Score=36.51 Aligned_cols=39 Identities=21% Similarity=0.129 Sum_probs=29.0
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
+.|.=+|+|. | ..+..|++.|.+|+++|.+++-++..++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence 3567788875 3 3344566779999999999998887664
No 409
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.01 E-value=6.1 Score=34.81 Aligned_cols=101 Identities=15% Similarity=0.041 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-CCc-----hhhhhhccCCCCceeeE
Q 037961 32 PKRNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-TMS-----ITELEQNVATQSSVDLV 103 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~D~V 103 (262)
..+..+--+|+|. |. .+..|++.|.+|++.|++++-++..++...-.+..+- ++- .+.+.... .....|+|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d~~~aDvv 87 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-TPEASDVF 87 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-SCCCCSEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-chhhCCEE
Confidence 3455656678875 33 3445667899999999999999887753110011000 000 00000000 11246888
Q ss_pred EEcccccc-------CC---hhHHHHHHHHhhcCCCeEEEE
Q 037961 104 TIASALHW-------FD---LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~~~~-------~d---~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+.+-.-.. .| ...+.+.+.+.|+ +|-+++.
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~-~g~iVV~ 127 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLK-KGNTIIV 127 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCC-TTEEEEE
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCC-CCCEEEE
Confidence 86543332 13 3345677888898 7765555
No 410
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.84 E-value=0.63 Score=40.07 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=58.1
Q ss_pred CCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 34 RNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
+.+|+=+|+|. |..+...+. .|++|+++|.+++-++.+++. ..+.....+ ..++.+. -..+|+|+.....
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN---SAEIETA---VAEADLLIGAVLV 240 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECC---HHHHHHH---HHTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCC---HHHHHHH---HcCCCEEEECCCc
Confidence 47899999964 544444443 588999999999888777542 122222211 1122211 1258999865544
Q ss_pred ccC-ChhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 110 HWF-DLPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 110 ~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
... .+.-+.++..+.|+ |||+++-..+.
T Consensus 241 ~~~~~~~li~~~~~~~~~-~g~~ivdv~~~ 269 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMR-TGSVIVDVAVD 269 (361)
T ss_dssp TTSSCCCCBCHHHHTTSC-TTCEEEETTCT
T ss_pred CCCCCCeecCHHHHhhCC-CCCEEEEEecC
Confidence 322 22213456778899 99988875543
No 411
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.63 E-value=0.52 Score=38.53 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=30.9
Q ss_pred CCCCceeeEEEccccccC---------------ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 95 ATQSSVDLVTIASALHWF---------------DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~---------------d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+++++||+|++......- -....++++.++|+ |||.++++.
T Consensus 19 l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk-~~g~i~v~~ 74 (260)
T 1g60_A 19 VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLD-KDGSLYIFN 74 (260)
T ss_dssp SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhc-CCeEEEEEc
Confidence 356789999987665322 13457889999999 999999864
No 412
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.42 E-value=1 Score=39.36 Aligned_cols=99 Identities=18% Similarity=0.161 Sum_probs=58.0
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCCC-------------Cch-------hhh
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTPT-------------MSI-------TEL 90 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-------------~~~-------~~~ 90 (262)
++.+|+=+|+|. |..+..++. .|++|+++|.++.-++.++.. +..+...+. .+. ..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~l-Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSM-GAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHT-TCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 467889999986 655555554 588999999999888877655 333321110 000 011
Q ss_pred hhccCCCCceeeEEEccccccCChhH-HHHHHHHhhcCCCeEEEEEe
Q 037961 91 EQNVATQSSVDLVTIASALHWFDLPQ-FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 91 ~~~~~~~~~~D~V~~~~~~~~~d~~~-~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+. -...|+|+..-.+.-..... +-+++.+.+| |||+++-..
T Consensus 250 ~e~---~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk-~g~vIVdva 292 (401)
T 1x13_A 250 AAQ---AKEVDIIVTTALIPGKPAPKLITREMVDSMK-AGSVIVDLA 292 (401)
T ss_dssp HHH---HHHCSEEEECCCCTTSCCCCCBCHHHHHTSC-TTCEEEETT
T ss_pred HHH---hCCCCEEEECCccCCCCCCeeeCHHHHhcCC-CCcEEEEEc
Confidence 111 12479998653221111112 2356778899 999887644
No 413
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.38 E-value=5.7 Score=30.99 Aligned_cols=92 Identities=12% Similarity=-0.020 Sum_probs=54.5
Q ss_pred eEEEEcCcccHhHHH----HHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 36 LAWDVGTRSGQAAAS----LAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 36 ~vlDvGcG~G~~~~~----l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
.|+=+|+| ..+.. |.+.+.+|+++|.+++.++...+..++.++.+|..+....+...+ ...|+|++...-.
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i--~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEV--SKNDVVVILTPRD- 76 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTC--CTTCEEEECCSCH-
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCc--ccCCEEEEecCCc-
Confidence 35666764 44444 445689999999999998876544467788887322223333322 3579988753311
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.....+....+-+. |...++.
T Consensus 77 -~~n~~~~~~a~~~~-~~~~iia 97 (218)
T 3l4b_C 77 -EVNLFIAQLVMKDF-GVKRVVS 97 (218)
T ss_dssp -HHHHHHHHHHHHTS-CCCEEEE
T ss_pred -HHHHHHHHHHHHHc-CCCeEEE
Confidence 11224555556555 5655554
No 414
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.16 E-value=6.3 Score=32.53 Aligned_cols=90 Identities=11% Similarity=0.024 Sum_probs=56.4
Q ss_pred CCCeEEEEcCcc-cHhHHH-HHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 33 KRNLAWDVGTRS-GQAAAS-LAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~-l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+.+|+=+|+|. |..... +...|.+|++.|.++.-.+.+.+. ++..... .+.++. -...|+|+.....+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~-----~~l~~~---l~~aDvVi~~~p~~ 224 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-GMEPFHI-----SKAAQE---LRDVDVCINTIPAL 224 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TSEEEEG-----GGHHHH---TTTCSEEEECCSSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCeecCh-----hhHHHH---hcCCCEEEECCChH
Confidence 567899999875 443333 334588999999998766555443 3333211 122222 13589999887776
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.++. +..+.+| ||+.++-...
T Consensus 225 ~i~~-----~~l~~mk-~~~~lin~ar 245 (293)
T 3d4o_A 225 VVTA-----NVLAEMP-SHTFVIDLAS 245 (293)
T ss_dssp CBCH-----HHHHHSC-TTCEEEECSS
T ss_pred HhCH-----HHHHhcC-CCCEEEEecC
Confidence 6654 2445789 8988775443
No 415
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.95 E-value=5 Score=32.61 Aligned_cols=85 Identities=12% Similarity=0.118 Sum_probs=52.0
Q ss_pred eEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCC
Q 037961 36 LAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFD 113 (262)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d 113 (262)
+|.=+|||. | .++..|.+.+.+|+++|.+++.++.+.+..-...... +.++. ...|+|+..-.-. .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~----~~~D~vi~av~~~--~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ------DLSLL----QTAKIIFLCTPIQ--L 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES------CGGGG----TTCSEEEECSCHH--H
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC------CHHHh----CCCCEEEEECCHH--H
Confidence 466788886 3 3445566678899999999998887764321111111 12221 3579998764432 2
Q ss_pred hhHHHHHHHHhhcCCCeEEE
Q 037961 114 LPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 114 ~~~~l~~~~r~Lk~pgG~l~ 133 (262)
...+++++...++ ||..++
T Consensus 70 ~~~~~~~l~~~~~-~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLS-PTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSC-TTCEEE
T ss_pred HHHHHHHHHhhCC-CCCEEE
Confidence 3456777777788 776554
No 416
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.86 E-value=0.64 Score=39.40 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=32.1
Q ss_pred CCCCceeeEEEccccc-----------cC-ChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 95 ATQSSVDLVTIASALH-----------WF-DLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~-----------~~-d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
+++++||+|++..... |+ -....+.++.++|+ |||.++++..
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk-~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLS-PTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcC-CCeEEEEEcC
Confidence 4577999999976653 22 24567889999999 9999998654
No 417
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.69 E-value=1.3 Score=39.57 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=46.1
Q ss_pred CCeEEEEcCcccHhHHHHH----hhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 34 RNLAWDVGTRSGQAAASLA----QIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
.++|+=+||| ..+..++ ..+.+|+.+|.+++.++.+.....+..+.|+..+..-+++.+. ...|++++.
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi--~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGA--QDADMLVAV 75 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTT--TTCSEEEEC
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCC--CcCCEEEEE
Confidence 3456667776 3444444 4578999999999999987755578888888333333444443 347888863
No 418
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.56 E-value=3.1 Score=36.21 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=30.6
Q ss_pred CCCeEEEEcCcccHhHHHHHhh---------CCeEEEEcCCHHHHHHHh
Q 037961 33 KRNLAWDVGTRSGQAAASLAQI---------YQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~ 72 (262)
..-.|+|+|+|.|.++..+.+. ..+++.||+|+...+.-+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQ 128 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHH
Confidence 3346899999999998877642 137999999998876433
No 419
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.53 E-value=5.7 Score=32.89 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=56.6
Q ss_pred CCCeEEEEcCcc-cHhHH-HHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 33 KRNLAWDVGTRS-GQAAA-SLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~-~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+.+|+=+|+|. |.... .+...|.+|++.|.++.-.+.+.+. ++..... .+.++. -...|+|+.....+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~~~-----~~l~~~---l~~aDvVi~~~p~~ 226 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEM-GLVPFHT-----DELKEH---VKDIDICINTIPSM 226 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCEEEEG-----GGHHHH---STTCSEEEECCSSC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCeEEch-----hhHHHH---hhCCCEEEECCChh
Confidence 567899999875 43333 3334588999999998766655442 3333211 123222 13589999888877
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEEEec
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAAWTY 137 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i~~~ 137 (262)
.++.+ ..+.+| ||+.++=...
T Consensus 227 ~i~~~-----~~~~mk-~g~~lin~a~ 247 (300)
T 2rir_A 227 ILNQT-----VLSSMT-PKTLILDLAS 247 (300)
T ss_dssp CBCHH-----HHTTSC-TTCEEEECSS
T ss_pred hhCHH-----HHHhCC-CCCEEEEEeC
Confidence 66532 456789 8987765443
No 420
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=85.27 E-value=8.9 Score=27.92 Aligned_cols=93 Identities=12% Similarity=-0.067 Sum_probs=53.8
Q ss_pred CeEEEEcCcccHhHHH----HHhhCCeEEEEcCC-HHHHHHHhc--CCCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 35 NLAWDVGTRSGQAAAS----LAQIYQHVIATDTS-PKQLKFAIK--LPNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 35 ~~vlDvGcG~G~~~~~----l~~~~~~v~~vD~s-~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
..++=+|+| ..+.. |...+.+|+++|.+ ++.++.... ..++.++.+|..+........+ ...|+|++..
T Consensus 4 ~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i--~~ad~vi~~~ 79 (153)
T 1id1_A 4 DHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI--DRCRAILALS 79 (153)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT--TTCSEEEECS
T ss_pred CcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcCh--hhCCEEEEec
Confidence 456777765 44444 44468999999997 454443332 2468888887222222333323 3578888764
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.-. .....+....+-+. |...++.
T Consensus 80 ~~d--~~n~~~~~~a~~~~-~~~~ii~ 103 (153)
T 1id1_A 80 DND--ADNAFVVLSAKDMS-SDVKTVL 103 (153)
T ss_dssp SCH--HHHHHHHHHHHHHT-SSSCEEE
T ss_pred CCh--HHHHHHHHHHHHHC-CCCEEEE
Confidence 321 22335566677777 6666665
No 421
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.19 E-value=3.7 Score=28.13 Aligned_cols=71 Identities=21% Similarity=0.111 Sum_probs=43.2
Q ss_pred CCeEEEEcCcc-cHh-HHHHHhhC-CeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 34 RNLAWDVGTRS-GQA-AASLAQIY-QHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
...|+=+|+|. |.. ...|.+.+ .+|+++|.++.-++.+. ..++.+...+.....+.... + ..+|+|+..-.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~--~~~d~vi~~~~ 78 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKA-L--GGFDAVISAAP 78 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHH-T--TTCSEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHH-H--cCCCEEEECCC
Confidence 35688899843 322 22344567 79999999998887766 34566666662111222222 1 25899987654
No 422
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.06 E-value=5.8 Score=34.83 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=28.9
Q ss_pred eEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 36 LAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 36 ~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
.|.=+|+|. |. ++..|++.|.+|+++|.+++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence 456688886 33 445567779999999999999887765
No 423
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=84.43 E-value=3.9 Score=35.36 Aligned_cols=113 Identities=15% Similarity=0.076 Sum_probs=72.8
Q ss_pred CCCChHHHHHHHHhhCC-CCCeEEEEcCcccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhcc
Q 037961 16 RPNYPKELFKLIASKTP-KRNLAWDVGTRSGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 16 rp~yp~~~~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 94 (262)
-..||+...+.|+.+.. .+..||.++.+.|.++..+.. ..+++.+.-|-...+..+.. ++...... .+.
T Consensus 27 ~~~~~~~~~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~--------~~~ 96 (381)
T 3dmg_A 27 ARGYRDPVHDLLQKTVEPFGERALDLNPGVGWGSLPLEG-RMAVERLETSRAAFRCLTAS-GLQARLAL--------PWE 96 (381)
T ss_dssp CSSSSCHHHHHHHTTCCCCSSEEEESSCTTSTTTGGGBT-TBEEEEEECBHHHHHHHHHT-TCCCEECC--------GGG
T ss_pred CCCCCChHHHHHHHHHHHhCCcEEEecCCCCccccccCC-CCceEEEeCcHHHHHHHHHc-CCCccccC--------Ccc
Confidence 35788888888888873 457899999999987766643 36778776665555544432 22211111 111
Q ss_pred CCCCceeeEEEccccccC--ChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 95 ATQSSVDLVTIASALHWF--DLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~~--d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.+...||+|+.-..=+-- ..+..+.++.+.|+ |||.+++..-..
T Consensus 97 ~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~-~g~~i~~~g~~~ 142 (381)
T 3dmg_A 97 AAAGAYDLVVLALPAGRGTAYVQASLVAAARALR-MGGRLYLAGDKN 142 (381)
T ss_dssp SCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEE-EEEEEEEEEEGG
T ss_pred CCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCC-CCCEEEEEEccH
Confidence 245679999865442211 13457888889999 999999877543
No 424
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.21 E-value=2.8 Score=41.11 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=54.6
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-e-EEEEcCCHHHHHHHhc-CCCceEEeCC--CCc----hhhhhhc---cC-CCCc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-H-VIATDTSPKQLKFAIK-LPNIRYQLTP--TMS----ITELEQN---VA-TQSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~-v~~vD~s~~~~~~a~~-~~~~~~~~~~--~~~----~~~~~~~---~~-~~~~ 99 (262)
...+++|+-||.|.++..+...|. + +.++|+++..++.-+. +++..+..+| .+. .+++... .+ ..+.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~ 618 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGD 618 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTT
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCC
Confidence 345789999999999999988886 4 6699999999886654 5677776665 110 0111110 12 2457
Q ss_pred eeeEEEccccccC
Q 037961 100 VDLVTIASALHWF 112 (262)
Q Consensus 100 ~D~V~~~~~~~~~ 112 (262)
+|+|+.....+-+
T Consensus 619 vDll~GGpPCQ~F 631 (1002)
T 3swr_A 619 VEMLCGGPPCQGF 631 (1002)
T ss_dssp CSEEEECCCCTTC
T ss_pred eeEEEEcCCCcch
Confidence 9999987766644
No 425
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=83.88 E-value=3.3 Score=44.75 Aligned_cols=98 Identities=17% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCCCCeEEEEcC--cccHhHHHHHhh-CCeEEEEcCCHHHHHHHhc----CCCceEEeCCCCch-hhhhhccCCCCceee
Q 037961 31 TPKRNLAWDVGT--RSGQAAASLAQI-YQHVIATDTSPKQLKFAIK----LPNIRYQLTPTMSI-TELEQNVATQSSVDL 102 (262)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~ 102 (262)
++++.+||=.|+ |.|..+.++++. |++|++++.+++-.+.+++ .....+.......+ ..+.... ....+|+
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t-~g~GvDv 1743 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHT-AGKGVDL 1743 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTT-TSCCEEE
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhc-CCCCceE
Confidence 467889998864 458888888875 8999999999988887774 22222232221111 1111111 2346999
Q ss_pred EEEccccccCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 103 VTIASALHWFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 103 V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
|+-..+ ...++...+.|+ +||+++.+.
T Consensus 1744 Vld~~g------~~~l~~~l~~L~-~~Gr~V~iG 1770 (2512)
T 2vz8_A 1744 VLNSLA------EEKLQASVRCLA-QHGRFLEIG 1770 (2512)
T ss_dssp EEECCC------HHHHHHHHTTEE-EEEEEEECC
T ss_pred EEECCC------chHHHHHHHhcC-CCcEEEEee
Confidence 986432 467899999999 999998754
No 426
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.28 E-value=5.2 Score=31.62 Aligned_cols=92 Identities=10% Similarity=-0.012 Sum_probs=56.4
Q ss_pred CCCeEEEEcCcccHhHHHHHh----hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQ----IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
..+.++=+||| ..+..+++ .+. |+++|.+++.++.++ .++.++.+|..+....+... -...|+|++...
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~--i~~ad~vi~~~~ 80 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKAN--VRGARAVIVDLE 80 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTT--CTTCSEEEECCS
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcC--cchhcEEEEcCC
Confidence 34567888875 55555554 456 999999999888777 57888888732222233332 245788887533
Q ss_pred cccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 109 LHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
-. .....+....+-+. |+..++.
T Consensus 81 ~d--~~n~~~~~~a~~~~-~~~~iia 103 (234)
T 2aef_A 81 SD--SETIHCILGIRKID-ESVRIIA 103 (234)
T ss_dssp CH--HHHHHHHHHHHHHC-SSSEEEE
T ss_pred Cc--HHHHHHHHHHHHHC-CCCeEEE
Confidence 11 11224556677778 7766655
No 427
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=83.00 E-value=8.2 Score=31.72 Aligned_cols=103 Identities=10% Similarity=0.006 Sum_probs=61.6
Q ss_pred CCCeEEEEcCccc-----HhHHHHHhhCCeEEEEcCCHHHHHHHhc----CCCceEEeCCCCchhhhhhc----cCCCCc
Q 037961 33 KRNLAWDVGTRSG-----QAAASLAQIYQHVIATDTSPKQLKFAIK----LPNIRYQLTPTMSITELEQN----VATQSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG~G-----~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~ 99 (262)
.++++|=.|++.| .++..|++.|++|+.++.++...+.+.+ ..++.++..|.-+..+++.+ .-.-+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4567888887633 3556677789999999999754443332 34677777772222222221 111257
Q ss_pred eeeEEEcccccc----------CChh--------------HHHHHHHHhhcCCCeEEEEEe
Q 037961 100 VDLVTIASALHW----------FDLP--------------QFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 100 ~D~V~~~~~~~~----------~d~~--------------~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.|+++.+-++.. .+.+ .+.+.+.+.++ .+|.++...
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~Iv~is 169 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA-DGGSILTLT 169 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT-TCEEEEEEE
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEe
Confidence 899997665432 1222 14556777788 789888644
No 428
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=82.87 E-value=4.7 Score=32.43 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=61.7
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhcc----CCCCceeeE
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNV----ATQSSVDLV 103 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~D~V 103 (262)
.++++|=.|++.|. .+..|++.|++|+.+|.+++.++...+. .++.++..|..+..+.+.+- -.-+..|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45678888877663 4556677899999999999887765432 45677777722222222110 112478999
Q ss_pred EEccccccC------ChhH--------------HHHHHHHhhcCCCeEEEEEe
Q 037961 104 TIASALHWF------DLPQ--------------FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 104 ~~~~~~~~~------d~~~--------------~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+-+.... +.+. +.+.+...++ .+|.++...
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~g~iv~is 138 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR-EGGSIVFTS 138 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEEC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-cCCEEEEEC
Confidence 876554321 1111 3445566677 688877633
No 429
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.81 E-value=1 Score=39.01 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCCeEEEEcCcc-cHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEE--eCC-------------CCc-------hh
Q 037961 33 KRNLAWDVGTRS-GQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQ--LTP-------------TMS-------IT 88 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~-------------~~~-------~~ 88 (262)
++.+|+=+|+|. |..+..++. .|++|+++|.++.-++.++.. +..+. ..+ .++ ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~-Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 567899999985 655555554 488999999998877777653 22222 000 000 00
Q ss_pred hhhhccCCCCceeeEEEccccccCChhH-HHHHHHHhhcCCCeEEEEEe
Q 037961 89 ELEQNVATQSSVDLVTIASALHWFDLPQ-FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~~d~~~-~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+... -..+|+|+......-..... +.++..+.+| |||+++-..
T Consensus 250 ~l~~~---~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk-~g~vivdva 294 (384)
T 1l7d_A 250 AVLKE---LVKTDIAITTALIPGKPAPVLITEEMVTKMK-PGSVIIDLA 294 (384)
T ss_dssp HHHHH---HTTCSEEEECCCCTTSCCCCCSCHHHHTTSC-TTCEEEETT
T ss_pred HHHHH---hCCCCEEEECCccCCCCCCeeeCHHHHhcCC-CCCEEEEEe
Confidence 12121 12489999543211111112 2367788899 999887644
No 430
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=82.78 E-value=7.9 Score=34.56 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcC
Q 037961 32 PKRNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKL 74 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 74 (262)
.....|.=+|+|. |. ++..|++.|.+|+++|.+++.++..++.
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNG 50 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCC
Confidence 3456788899996 43 4556777899999999999999888753
No 431
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=82.57 E-value=12 Score=33.07 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=59.4
Q ss_pred CCeEEEEcCcc-cHh-HHHHHhhCCeEEEEcCCHHHHHHHhcCC-----------------CceEEeCCCCchhhhhhcc
Q 037961 34 RNLAWDVGTRS-GQA-AASLAQIYQHVIATDTSPKQLKFAIKLP-----------------NIRYQLTPTMSITELEQNV 94 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~ 94 (262)
.+.|-=+|+|. |.. +..|++ |.+|+++|++++.++..++.. ++.+- . +.++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t-t------d~~ea- 106 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT-T------DKHDA- 106 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE-S------CHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE-c------CHHHH-
Confidence 34677888885 332 334455 899999999999998776521 11111 0 11110
Q ss_pred CCCCceeeEEEcccccc------CC---hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhc
Q 037961 95 ATQSSVDLVTIASALHW------FD---LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFK 151 (262)
Q Consensus 95 ~~~~~~D~V~~~~~~~~------~d---~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~ 151 (262)
-...|+|+.+-.-.. .| ...+++.+.. |+ ||-+++.-+...+...+++.+.+.
T Consensus 107 --~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~-~g~iVV~~STv~pgtt~~l~~~l~ 168 (432)
T 3pid_A 107 --YRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-IN-PNAVMIIKSTIPVGFTRDIKERLG 168 (432)
T ss_dssp --HTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HC-TTSEEEECSCCCTTHHHHHHHHHT
T ss_pred --HhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cC-CCcEEEEeCCCChHHHHHHHHHHh
Confidence 124688886544331 12 3446778888 88 887766533333333445544443
No 432
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.23 E-value=5.4 Score=35.44 Aligned_cols=89 Identities=24% Similarity=0.233 Sum_probs=54.8
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcC--------------C-----Cc-eEEeCCCCchhhhhh
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKL--------------P-----NI-RYQLTPTMSITELEQ 92 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------------~-----~~-~~~~~~~~~~~~~~~ 92 (262)
..|.=||+|. | ..+..++..|.+|+++|.+++.++.+++. . .. ..... +.+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~------~~~~ 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS------STKE 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEES------CGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcC------CHHH
Confidence 5688999997 3 35566777899999999999888765431 0 00 01111 1211
Q ss_pred ccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 93 NVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
-...|+|+.+-.-..--...+++++...++ |+.+|+.
T Consensus 112 ----~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~-~~~ii~s 148 (463)
T 1zcj_A 112 ----LSTVDLVVEAVFEDMNLKKKVFAELSALCK-PGAFLCT 148 (463)
T ss_dssp ----GTTCSEEEECCCSCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred ----HCCCCEEEEcCCCCHHHHHHHHHHHHhhCC-CCeEEEe
Confidence 134799987653110012457888888998 7766554
No 433
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.22 E-value=3.6 Score=34.68 Aligned_cols=38 Identities=24% Similarity=0.073 Sum_probs=30.6
Q ss_pred CeEEEEcCcc--cHhHHHHHhhCCeEEEEcCCHHHHHHHh
Q 037961 35 NLAWDVGTRS--GQAAASLAQIYQHVIATDTSPKQLKFAI 72 (262)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (262)
.+|-=||+|+ +..+..++..|.+|++.|++++.++.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4577889986 3456667788999999999999988774
No 434
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=81.99 E-value=3.1 Score=34.50 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=30.0
Q ss_pred CeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHH
Q 037961 35 NLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFA 71 (262)
Q Consensus 35 ~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a 71 (262)
.+|.=||+|. |. .+..++..|.+|+++|.+++.++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 5688899997 33 5666777899999999999988765
No 435
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=81.83 E-value=7.8 Score=34.28 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=61.0
Q ss_pred CCCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-----------CCch-hhhhhccCCCC
Q 037961 33 KRNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-----------TMSI-TELEQNVATQS 98 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~ 98 (262)
..-++-=+|+|. |. .+..|++.|.+|++.|.+++-++..++..+-.+..+- .+.. .+..+. -.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea---~~ 83 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEG---VK 83 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHH---HT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHH---Hh
Confidence 334567788875 33 3445667799999999999998877653111111000 0000 011110 12
Q ss_pred ceeeEEEcccccc------CC---hhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhc
Q 037961 99 SVDLVTIASALHW------FD---LPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFK 151 (262)
Q Consensus 99 ~~D~V~~~~~~~~------~d---~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~ 151 (262)
..|+|+.+-.-.. .| ...+++.+...|+ +|-.++..+...+...+.+.+++.
T Consensus 84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~-~g~iVV~~STv~pgtt~~l~~~l~ 144 (446)
T 4a7p_A 84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLT-KPSVIVTKSTVPVGTGDEVERIIA 144 (446)
T ss_dssp TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCC-SCCEEEECSCCCTTHHHHHHHHHH
T ss_pred cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcC-CCCEEEEeCCCCchHHHHHHHHHH
Confidence 3688886632221 12 4457788888898 776665533223333344444443
No 436
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.57 E-value=5 Score=32.37 Aligned_cols=87 Identities=8% Similarity=0.049 Sum_probs=53.6
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCe-EEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQH-VIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
.+|.=+|||. | .++..+++.+.+ |.++|.+++.++.+.+.-++.... +.++. -...|+|+..-.-.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~---~~~~Dvvi~av~~~- 79 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTT-------DLAEV---NPYAKLYIVSLKDS- 79 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEES-------CGGGS---CSCCSEEEECCCHH-
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeC-------CHHHH---hcCCCEEEEecCHH-
Confidence 4678899985 3 334456667887 899999999887665432344321 12221 12479999765433
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
....+++++...++ +|..++-
T Consensus 80 -~~~~v~~~l~~~~~-~~~ivv~ 100 (266)
T 3d1l_A 80 -AFAELLQGIVEGKR-EEALMVH 100 (266)
T ss_dssp -HHHHHHHHHHTTCC-TTCEEEE
T ss_pred -HHHHHHHHHHhhcC-CCcEEEE
Confidence 22556677777777 6665544
No 437
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.52 E-value=4.4 Score=33.21 Aligned_cols=84 Identities=12% Similarity=0.161 Sum_probs=53.1
Q ss_pred CeEEEEcC-cc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 35 NLAWDVGT-RS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 35 ~~vlDvGc-G~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
.+|.=||+ |. | .++..|+..+.+|+++|.+++.++.+.+. ++... + ..+. -...|+|+..-.-..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~--~------~~~~---~~~aDvVi~av~~~~ 79 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-GIPLT--D------GDGW---IDEADVVVLALPDNI 79 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-TCCCC--C------SSGG---GGTCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-CCCcC--C------HHHH---hcCCCEEEEcCCchH
Confidence 46888999 85 3 34556667788999999999888776653 22221 1 1111 124799987644332
Q ss_pred CChhHHHHHHHHhhcCCCeEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~ 133 (262)
...+++++...++ ||..++
T Consensus 80 --~~~v~~~l~~~l~-~~~ivv 98 (286)
T 3c24_A 80 --IEKVAEDIVPRVR-PGTIVL 98 (286)
T ss_dssp --HHHHHHHHGGGSC-TTCEEE
T ss_pred --HHHHHHHHHHhCC-CCCEEE
Confidence 4556777777777 666544
No 438
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=81.36 E-value=0.88 Score=37.73 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=49.1
Q ss_pred cCcccHhHHHHHh-hCCeEEEEcCCHHHHHHHhcCCCceEEeCC---CCc-hhhhhhccCCCCceeeEEEcccc----cc
Q 037961 41 GTRSGQAAASLAQ-IYQHVIATDTSPKQLKFAIKLPNIRYQLTP---TMS-ITELEQNVATQSSVDLVTIASAL----HW 111 (262)
Q Consensus 41 GcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~D~V~~~~~~----~~ 111 (262)
.++.|.+...+.+ .|..|..||-.-.. ....++++.-- .+. ..|+.. |...+.+|+|++..+- |+
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~~-----p~k~v~wi~Pi~GAt~~~~lDfg~-p~~~~k~DvV~SDMApn~sGh~ 222 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLSV-----PGKMVDWLSDRPEATFRARLDLGI-PGDVPKYDIIFVNVRTPYKYHH 222 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCCC-----TTSEEEEEESSTTCSEECCGGGCS-CTTSCCEEEEEEECCCCCCSCH
T ss_pred ccCCCCHHHHHhhCCCcEEEEEeccccc-----CCceeEeeccCCCceeecccccCC-ccccCcCCEEEEcCCCCCCCcc
Confidence 4566667766666 37777777532110 11223333210 000 012211 1123679999986554 44
Q ss_pred ----CChhH----HHHHHHHhhcCCCeEEEEEecC
Q 037961 112 ----FDLPQ----FYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 112 ----~d~~~----~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
.|... ++..+.++|+ |||+|++-.+.
T Consensus 223 yqQC~DHarii~Lal~fA~~vLk-PGGtfV~Kvyg 256 (320)
T 2hwk_A 223 YQQCEDHAIKLSMLTKKACLHLN-PGGTCVSIGYG 256 (320)
T ss_dssp HHHHHHHHHHHHHTHHHHGGGEE-EEEEEEEEECC
T ss_pred ccccchHHHHHHHHHHHHHHhcC-CCceEEEEEec
Confidence 23222 5678889999 99999984444
No 439
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=81.30 E-value=5.2 Score=31.75 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc--CCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 32 PKRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK--LPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 32 ~~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
.++.+||=.|++.|. ++..|++.|++|+.++.++..++...+ ..++.+...|.-+..++...--.-+..|+++.+
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 366788888877652 445566779999999999988776543 246777777722222333322123568999976
Q ss_pred ccc
Q 037961 107 SAL 109 (262)
Q Consensus 107 ~~~ 109 (262)
-+.
T Consensus 92 Ag~ 94 (249)
T 3f9i_A 92 AGI 94 (249)
T ss_dssp CC-
T ss_pred CCC
Confidence 654
No 440
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.12 E-value=8 Score=31.74 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=55.6
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-----CCchhhhhhccCCCCceeeEEEcc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-----TMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
.+|.=+|+|. | .++..|++.|.+|+++|.+++.++..++. ++...... .....+..+..-.-..+|+|+..-
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 3578899985 3 34455667789999999999888776543 22222100 000000111100012589998765
Q ss_pred ccccCChhHHHHHHHHhhcCCCeEEEEE
Q 037961 108 ALHWFDLPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 108 ~~~~~d~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
.-+ ....+++++...++ |+..++..
T Consensus 83 ~~~--~~~~v~~~l~~~l~-~~~~iv~~ 107 (316)
T 2ew2_A 83 KAQ--QLDAMFKAIQPMIT-EKTYVLCL 107 (316)
T ss_dssp CHH--HHHHHHHHHGGGCC-TTCEEEEC
T ss_pred ccc--cHHHHHHHHHHhcC-CCCEEEEe
Confidence 432 34567778888888 77665543
No 441
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=80.35 E-value=7.9 Score=32.31 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-----CCc-hhhhhhccCCCCceeeEE
Q 037961 33 KRNLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-----TMS-ITELEQNVATQSSVDLVT 104 (262)
Q Consensus 33 ~~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~D~V~ 104 (262)
...+|.=+|+|. | .++..|++.|.+|+.+ .+++.++..++. ++.....+ ... ..+.+. -..+|+|+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vi 91 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT-GLRLETQSFDEQVKVSASSDPSA----VQGADLVL 91 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH-CEEEECSSCEEEECCEEESCGGG----GTTCSEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC-CeEEEcCCCcEEEeeeeeCCHHH----cCCCCEEE
Confidence 456789999996 3 4556677789999999 898888776642 11111000 000 011211 14689998
Q ss_pred EccccccCChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhh
Q 037961 105 IASALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVF 150 (262)
Q Consensus 105 ~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~ 150 (262)
..---+ +...+++++...++ |+..++....+-.. .+.+.+++
T Consensus 92 lavk~~--~~~~~l~~l~~~l~-~~~~iv~~~nGi~~-~~~l~~~~ 133 (318)
T 3hwr_A 92 FCVKST--DTQSAALAMKPALA-KSALVLSLQNGVEN-ADTLRSLL 133 (318)
T ss_dssp ECCCGG--GHHHHHHHHTTTSC-TTCEEEEECSSSSH-HHHHHHHC
T ss_pred EEcccc--cHHHHHHHHHHhcC-CCCEEEEeCCCCCc-HHHHHHHc
Confidence 765443 56778888888888 77665544333222 23445555
No 442
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=80.19 E-value=12 Score=30.02 Aligned_cols=103 Identities=15% Similarity=0.035 Sum_probs=60.0
Q ss_pred CCCeEEEEcCc--cc--H-hHHHHHhhCCeEEEEcCCHHHHHHHhc----C--CCceEEeCCCCchhhhhhc----cCCC
Q 037961 33 KRNLAWDVGTR--SG--Q-AAASLAQIYQHVIATDTSPKQLKFAIK----L--PNIRYQLTPTMSITELEQN----VATQ 97 (262)
Q Consensus 33 ~~~~vlDvGcG--~G--~-~~~~l~~~~~~v~~vD~s~~~~~~a~~----~--~~~~~~~~~~~~~~~~~~~----~~~~ 97 (262)
.++++|=.|++ .| . ++..|++.|++|+.++.++...+.+.+ . .++.++..|.-+..+++.+ .-..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45678888876 33 2 556677789999999888754443332 2 2678888772111222221 1112
Q ss_pred CceeeEEEcccccc----------CChhH--------------HHHHHHHhhcCCCeEEEEEe
Q 037961 98 SSVDLVTIASALHW----------FDLPQ--------------FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 98 ~~~D~V~~~~~~~~----------~d~~~--------------~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+|+++.+-++.. .+.+. +.+.+...++ ++|.++...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT-EGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-TCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCceEEEEe
Confidence 46899887655432 12222 3456666777 789888644
No 443
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.78 E-value=4.1 Score=32.43 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=46.6
Q ss_pred CCeEEEEcCccc---HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 34 RNLAWDVGTRSG---QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 34 ~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
++++|=.|++.| .++..|++.|++|++++.++..++...+..++.++..|.-+..+.+...-.-+.+|+++.+-+.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence 456777777655 2445566779999999999877665444446777777722222222221112468999976554
No 444
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=79.75 E-value=12 Score=29.39 Aligned_cols=77 Identities=19% Similarity=0.151 Sum_probs=46.7
Q ss_pred CCCeEEEEcCccc---HhHHHHHhhCCeEEEEcCCHHHHHHHh-cCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRSG---QAAASLAQIYQHVIATDTSPKQLKFAI-KLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
+++++|=.|++.| .++..|++.|++|++++.++..++... +..+++++..|..+..+.+..--.-+.+|+|+.+-+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 3456787776543 234445567999999999987765443 345677777772222233332212356899997655
Q ss_pred c
Q 037961 109 L 109 (262)
Q Consensus 109 ~ 109 (262)
.
T Consensus 86 ~ 86 (244)
T 1cyd_A 86 L 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
No 445
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.14 E-value=18 Score=27.67 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=55.5
Q ss_pred eEEEEcCcccHhHHH----HHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 36 LAWDVGTRSGQAAAS----LAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 36 ~vlDvGcG~G~~~~~----l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
+||=.|+ +|..+.. |++.|.+|++++-++.-+.... ..++.++.+|. .+.+.. .-..+|+|+.+.+..|
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~---~d~~~~--~~~~~d~vi~~ag~~~ 74 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEP---LVLTEA--DLDSVDAVVDALSVPW 74 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCG---GGCCHH--HHTTCSEEEECCCCCT
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEeccc---ccccHh--hcccCCEEEECCccCC
Confidence 3566664 4544444 4456899999999988766443 25788888871 111111 1235799998776654
Q ss_pred C-C----hhHHHHHHHHhhcCCCeEEEEE
Q 037961 112 F-D----LPQFYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 112 ~-d----~~~~l~~~~r~Lk~pgG~l~i~ 135 (262)
. + .......+.+.+++.|+.+++.
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 75 GSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp TSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 3 1 1224556666776345566653
No 446
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.09 E-value=7.5 Score=32.68 Aligned_cols=94 Identities=16% Similarity=0.063 Sum_probs=55.2
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-----CC--chhhhhhccCCCCceeeEEE
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-----TM--SITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~D~V~~ 105 (262)
.+|.=+|+|. | .++..|++.+.+|+++|.+++.++..++...+.+.... .. ...+.++. -..+|+|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEEEE
Confidence 4678899986 3 34455666789999999999888766543122111000 00 00112111 135799987
Q ss_pred ccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 106 ASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 106 ~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.-.-+. ...+++++...++ +|..++.
T Consensus 82 ~v~~~~--~~~~~~~l~~~l~-~~~~vv~ 107 (359)
T 1bg6_A 82 VVPAIH--HASIAANIASYIS-EGQLIIL 107 (359)
T ss_dssp CSCGGG--HHHHHHHHGGGCC-TTCEEEE
T ss_pred eCCchH--HHHHHHHHHHhCC-CCCEEEE
Confidence 654332 3567788888888 7765554
No 447
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=78.97 E-value=9.1 Score=31.26 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=49.7
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
.++++|=.|++.|. ++..|++.|++|++++.++.-++.+.+. .++.++..|..+..++...--.-+..|+++.+-
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA 94 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA 94 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 45678888877652 4455667799999999999888766543 457777777222233333211125789999765
Q ss_pred cc
Q 037961 108 AL 109 (262)
Q Consensus 108 ~~ 109 (262)
++
T Consensus 95 g~ 96 (291)
T 3rd5_A 95 GI 96 (291)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 448
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=76.77 E-value=8.3 Score=27.28 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=51.2
Q ss_pred CCeEEEEcCcc-cHh-HHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 34 RNLAWDVGTRS-GQA-AASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
..+|+=+|+|. |.. +..|.+.+.+|+++|.++..++.+++. ......++..+....... .-..+|+|+....-..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~--~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSL--GIRNFEYVIVAIGANI 82 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTT--TGGGCSEEEECCCSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhc--CCCCCCEEEECCCCch
Confidence 34678889753 222 223344588999999998877665543 345555552111222222 1246899986544210
Q ss_pred CChhHHHHHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+....+....+-+. +. .++.
T Consensus 83 -~~~~~~~~~~~~~~-~~-~ii~ 102 (144)
T 2hmt_A 83 -QASTLTTLLLKELD-IP-NIWV 102 (144)
T ss_dssp -HHHHHHHHHHHHTT-CS-EEEE
T ss_pred -HHHHHHHHHHHHcC-CC-eEEE
Confidence 11224445555666 65 4443
No 449
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=76.72 E-value=20 Score=32.01 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCcc-c-HhHHHHHhh-CC-eEEEEcCCHH----HHHHHhcC-CCce-EE------------eCCCCch-h
Q 037961 32 PKRNLAWDVGTRS-G-QAAASLAQI-YQ-HVIATDTSPK----QLKFAIKL-PNIR-YQ------------LTPTMSI-T 88 (262)
Q Consensus 32 ~~~~~vlDvGcG~-G-~~~~~l~~~-~~-~v~~vD~s~~----~~~~a~~~-~~~~-~~------------~~~~~~~-~ 88 (262)
.+.+.|-=+|+|. | ..+..|+.. |. +|+++|.+++ -++..++. ..+. +. .+. +.. .
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~-l~~tt 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGK-FECTP 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTC-EEEES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCC-eEEeC
Confidence 4556788899997 3 344567778 89 9999999999 77766542 1110 00 000 000 0
Q ss_pred hhhhccCCCCceeeEEEcccccc-------CCh---hHHHHHHHHhhcCCCeEEEE
Q 037961 89 ELEQNVATQSSVDLVTIASALHW-------FDL---PQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 89 ~~~~~~~~~~~~D~V~~~~~~~~-------~d~---~~~l~~~~r~Lk~pgG~l~i 134 (262)
+.+. -...|+|+.+-.-.. .|. ..+.+.+...|+ +|-.++.
T Consensus 95 d~ea----~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~-~g~iVV~ 145 (478)
T 3g79_A 95 DFSR----ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLK-PGMLVVL 145 (478)
T ss_dssp CGGG----GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCC-TTCEEEE
T ss_pred cHHH----HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcC-CCcEEEE
Confidence 1111 124688887654443 233 346678888899 7776654
No 450
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=76.61 E-value=2.2 Score=31.25 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=38.5
Q ss_pred ccCCCCceeeEEEcccc--ccC-ChhHHHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhhcccc
Q 037961 93 NVATQSSVDLVTIASAL--HWF-DLPQFYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVFKPFD 154 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~--~~~-d~~~~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~~~~~ 154 (262)
..++..+||+|+....- ... =+..+++.+.+.|| |||.|.- .+. ....+.+++-|.
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLk-pgG~L~g----l~~-~~~~EailaGfv 111 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLK-PNGSLIG----LSD-IYKVDALINGFE 111 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCC-TTCCEEC----CCH-HHHHHHHHHTEE
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhC-CCCEEEe----cCc-chhhHHHhhccE
Confidence 34688999999854322 222 34779999999999 9999986 111 245666777665
No 451
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=76.52 E-value=17 Score=28.46 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=46.9
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHh-cCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAI-KLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++.++|=.|++.|. ++..|++.|.+|++++.++..++... +..++.++..|..+..+++..--.-+.+|+|+.+-+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 34677877775542 34455667999999999987776543 344667777762222233332112356899997655
Q ss_pred c
Q 037961 109 L 109 (262)
Q Consensus 109 ~ 109 (262)
.
T Consensus 86 ~ 86 (244)
T 3d3w_A 86 V 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
No 452
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=76.35 E-value=7.2 Score=34.91 Aligned_cols=88 Identities=19% Similarity=0.157 Sum_probs=54.7
Q ss_pred CeEEEEcCcc--cHhHHHHHhhCCeEEEEcCCHHHHHHHhcC-----------C------------CceEEeCCCCchhh
Q 037961 35 NLAWDVGTRS--GQAAASLAQIYQHVIATDTSPKQLKFAIKL-----------P------------NIRYQLTPTMSITE 89 (262)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------~------------~~~~~~~~~~~~~~ 89 (262)
.+|-=||+|+ +..+..++..|.+|++.|.+++.++.+.+. . ++... . +
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~------~ 78 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-T------D 78 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-C------C
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-C------C
Confidence 3467789987 345666778899999999999999876531 1 11111 1 1
Q ss_pred hhhccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 90 LEQNVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 90 ~~~~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.+. -...|+|+.+-.-..--...+++++...++ |+..|+.
T Consensus 79 ~~~----~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-~~~Ilas 118 (483)
T 3mog_A 79 IHA----LAAADLVIEAASERLEVKKALFAQLAEVCP-PQTLLTT 118 (483)
T ss_dssp GGG----GGGCSEEEECCCCCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred HHH----hcCCCEEEEcCCCcHHHHHHHHHHHHHhhc-cCcEEEe
Confidence 111 134699986532110012458889999998 7776654
No 453
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=76.32 E-value=12 Score=30.75 Aligned_cols=103 Identities=15% Similarity=0.020 Sum_probs=59.9
Q ss_pred CCCeEEEEcCcc----cH-hHHHHHhhCCeEEEEcCCHHHHHHHh----cCCCceEEeCCCCchhhhhhcc----CCCCc
Q 037961 33 KRNLAWDVGTRS----GQ-AAASLAQIYQHVIATDTSPKQLKFAI----KLPNIRYQLTPTMSITELEQNV----ATQSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG~----G~-~~~~l~~~~~~v~~vD~s~~~~~~a~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (262)
.++++|=.|++. |. ++..|++.|++|+.+|.++...+.+. ....+.++..|.-+..+++.+- -.-+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 356788888753 32 55667778999999999975444332 2245677777722222222211 01246
Q ss_pred eeeEEEcccccc----------CChhH--------------HHHHHHHhhcCCCeEEEEEe
Q 037961 100 VDLVTIASALHW----------FDLPQ--------------FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 100 ~D~V~~~~~~~~----------~d~~~--------------~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+|+++.+-++.. .+.+. +.+.+...++ .+|.++...
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~g~IV~is 168 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMT-NGGSILTLS 168 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-TCEEEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCEEEEEE
Confidence 899997665431 12221 3445666777 688888644
No 454
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=76.32 E-value=13 Score=30.33 Aligned_cols=86 Identities=12% Similarity=0.079 Sum_probs=54.2
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCC---eEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQ---HVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
.+|.=||||. | .++..+++.+. +|++.|.+++.++.+.+.-++...... .+.. ...|+|+.+-.-
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~------~~~~----~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDN------RQGA----LNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCH------HHHH----SSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCCh------HHHH----hcCCeEEEEeCH
Confidence 4577789986 3 34555666776 899999999988877654355443211 1111 246999865432
Q ss_pred ccCChhHHHHHHHHh-hcCCCeEEE
Q 037961 110 HWFDLPQFYKQVKWV-LKKPSGVIA 133 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~-Lk~pgG~l~ 133 (262)
-....+++++... ++ ++-.++
T Consensus 74 --~~~~~vl~~l~~~~l~-~~~iii 95 (280)
T 3tri_A 74 --HQIKMVCEELKDILSE-TKILVI 95 (280)
T ss_dssp --GGHHHHHHHHHHHHHT-TTCEEE
T ss_pred --HHHHHHHHHHHhhccC-CCeEEE
Confidence 2456678888887 77 554433
No 455
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=76.28 E-value=8 Score=32.29 Aligned_cols=88 Identities=20% Similarity=0.123 Sum_probs=49.1
Q ss_pred CChHHHHHHHHhhCCCCCeEEEEcCcccHhHHHH----HhhCCeEEEEcCC----HHHHHHHhcC------CCceEEeCC
Q 037961 18 NYPKELFKLIASKTPKRNLAWDVGTRSGQAAASL----AQIYQHVIATDTS----PKQLKFAIKL------PNIRYQLTP 83 (262)
Q Consensus 18 ~yp~~~~~~l~~~~~~~~~vlDvGcG~G~~~~~l----~~~~~~v~~vD~s----~~~~~~a~~~------~~~~~~~~~ 83 (262)
.||+.+-+.........++||=.| |+|.++..+ ++.|.+|++++.+ ...+...... .++.++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 9 IYMSRYEEITQQLIFSPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp -CCHHHHHHHHHHHHSCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred HHHHHHhhHHhhCCCCCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEcc
Confidence 344444333333223456788777 455555554 4568999999984 3344433332 678888888
Q ss_pred CCchhhhhhccCCCCceeeEEEcccc
Q 037961 84 TMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 84 ~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
..+.+++... + ..+|+|+..-+.
T Consensus 88 l~d~~~~~~~-~--~~~d~Vih~A~~ 110 (351)
T 3ruf_A 88 IRDLTTCEQV-M--KGVDHVLHQAAL 110 (351)
T ss_dssp TTCHHHHHHH-T--TTCSEEEECCCC
T ss_pred CCCHHHHHHH-h--cCCCEEEECCcc
Confidence 2222223332 1 268999866553
No 456
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=75.83 E-value=5.8 Score=37.73 Aligned_cols=51 Identities=12% Similarity=0.004 Sum_probs=38.2
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC-------CeEEEEcCCHHHHHHHhc-CCCceEEeCC
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY-------QHVIATDTSPKQLKFAIK-LPNIRYQLTP 83 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~-------~~v~~vD~s~~~~~~a~~-~~~~~~~~~~ 83 (262)
+..+++|+-||.|.++.-+...| .-+.++|+++.+++.-+. +++......+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~d 269 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEK 269 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCc
Confidence 34678999999999999887654 346799999999986654 4565555444
No 457
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=75.49 E-value=16 Score=29.08 Aligned_cols=76 Identities=11% Similarity=0.028 Sum_probs=44.3
Q ss_pred CCeEEEEcCccc---HhHHHHHhhCCeEEEEcCCHHHHHHHhc--CCCceEEeCCCCchhhhhhcc----CCCCceeeEE
Q 037961 34 RNLAWDVGTRSG---QAAASLAQIYQHVIATDTSPKQLKFAIK--LPNIRYQLTPTMSITELEQNV----ATQSSVDLVT 104 (262)
Q Consensus 34 ~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~V~ 104 (262)
++++|=.|++.| .++..|++.|++|++++.++..++...+ ..++.++..|..+..+.+..- -.-+..|+++
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 85 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLV 85 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 456777776654 2344556679999999999877665432 245666766621112221110 0124689998
Q ss_pred Ecccc
Q 037961 105 IASAL 109 (262)
Q Consensus 105 ~~~~~ 109 (262)
.+-+.
T Consensus 86 ~~Ag~ 90 (253)
T 1hxh_A 86 NNAGI 90 (253)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 76654
No 458
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=75.09 E-value=26 Score=31.12 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=30.5
Q ss_pred CeEEEEcCcc-c-HhHHHHHhh--CCeEEEEcCCHHHHHHHhc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQI--YQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~--~~~v~~vD~s~~~~~~a~~ 73 (262)
..|.=||+|. | ..+..|++. +.+|+++|.+++-++..++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~ 52 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS 52 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC
Confidence 4788899996 4 345566777 6899999999999888764
No 459
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=74.79 E-value=16 Score=29.70 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=52.0
Q ss_pred CeEEEEcCcc-c-HhHHHHHhh--CCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 35 NLAWDVGTRS-G-QAAASLAQI--YQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+|.=||+|. | .++..|+.. +.+|++.|.+++.++.+.+.........+ .++. -...|+|+.+-.-+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~------~~~~---~~~aDvVilavp~~ 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATAD------FKVF---AALADVIILAVPIK 77 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESC------TTTT---GGGCSEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCC------HHHh---hcCCCEEEEcCCHH
Confidence 4678899886 3 344556666 57899999999888776553211111111 1111 13479998765433
Q ss_pred cCChhHHHHHHHHh-hcCCCeEEE
Q 037961 111 WFDLPQFYKQVKWV-LKKPSGVIA 133 (262)
Q Consensus 111 ~~d~~~~l~~~~r~-Lk~pgG~l~ 133 (262)
.. ..+++++... |+ +|..++
T Consensus 78 ~~--~~v~~~l~~~~l~-~~~ivi 98 (290)
T 3b1f_A 78 KT--IDFIKILADLDLK-EDVIIT 98 (290)
T ss_dssp HH--HHHHHHHHTSCCC-TTCEEE
T ss_pred HH--HHHHHHHHhcCCC-CCCEEE
Confidence 22 5567777777 87 665544
No 460
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=74.58 E-value=4.1 Score=32.94 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=62.3
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
.++++|=-|++.|. .++.|++.|++|+.+|.+++.++.+. ..++.....|.-+.++.+.+--.-++.|+++.+-.+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 46788888988874 56667788999999999987654332 346677777722223333332223679999876544
Q ss_pred c----cCChhH--------------HHHHHHHhhcCCCeEEEEE
Q 037961 110 H----WFDLPQ--------------FYKQVKWVLKKPSGVIAAW 135 (262)
Q Consensus 110 ~----~~d~~~--------------~l~~~~r~Lk~pgG~l~i~ 135 (262)
. -++.+. ..+.+...|++.||.++..
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 132 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNI 132 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEE
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 2 112211 2345566665257887753
No 461
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=74.14 E-value=13 Score=31.04 Aligned_cols=91 Identities=14% Similarity=0.065 Sum_probs=54.6
Q ss_pred CCCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 33 KRNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
...+|.=||+|. |. .+..|++.|.+|++.|.+++-++.+.+. ++.... +.++. -...|+|+..-.-.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~~~-------~~~e~---~~~aDvVi~~vp~~ 98 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GATIHE-------QARAA---ARDADIVVSMLENG 98 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCEEES-------SHHHH---HTTCSEEEECCSSH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCEeeC-------CHHHH---HhcCCEEEEECCCH
Confidence 445788899986 43 4556677899999999999988877654 443332 12221 12368888654310
Q ss_pred cCChhHHHH--HHHHhhcCCCeEEEEEe
Q 037961 111 WFDLPQFYK--QVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 111 ~~d~~~~l~--~~~r~Lk~pgG~l~i~~ 136 (262)
.+.+.++. ++...++ +|.+++-.+
T Consensus 99 -~~~~~v~~~~~~~~~l~-~~~~vi~~s 124 (320)
T 4dll_A 99 -AVVQDVLFAQGVAAAMK-PGSLFLDMA 124 (320)
T ss_dssp -HHHHHHHTTTCHHHHCC-TTCEEEECS
T ss_pred -HHHHHHHcchhHHhhCC-CCCEEEecC
Confidence 01223443 5556777 776665543
No 462
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=74.09 E-value=9.1 Score=31.50 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=45.2
Q ss_pred CCCeEEEEcCccc---HhHHHHHhhCCeEEEEcCCHHHHHHHhc----C-C---CceEEeCCCCchhhhhhcc----CCC
Q 037961 33 KRNLAWDVGTRSG---QAAASLAQIYQHVIATDTSPKQLKFAIK----L-P---NIRYQLTPTMSITELEQNV----ATQ 97 (262)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~-~---~~~~~~~~~~~~~~~~~~~----~~~ 97 (262)
.++++|=.|++.| .++..|++.|++|++++.+++-++...+ . . ++.++..|.-+..+++..- -.-
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 3466777777655 2444566679999999999876654321 1 2 5677777721112222210 012
Q ss_pred CceeeEEEcccc
Q 037961 98 SSVDLVTIASAL 109 (262)
Q Consensus 98 ~~~D~V~~~~~~ 109 (262)
+.+|+++.+-+.
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999976654
No 463
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=73.88 E-value=7.7 Score=34.17 Aligned_cols=90 Identities=14% Similarity=0.059 Sum_probs=53.3
Q ss_pred CCCeEEEEcCcc-cHhHHHHH-hhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 33 KRNLAWDVGTRS-GQAAASLA-QIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+.+|+=+|+|. |......+ ..|.+|+++|+++.-...+... +..+. + +++. -...|+|+....-.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~-G~~v~--~------Leea---l~~ADIVi~atgt~ 286 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD-GFRLV--K------LNEV---IRQVDIVITCTGNK 286 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC--C------HHHH---TTTCSEEEECSSCS
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHc-CCEec--c------HHHH---HhcCCEEEECCCCc
Confidence 678899999986 54444443 4589999999998655445432 23222 1 2221 12469888742211
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEEEecCC
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAAWTYTM 139 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~ 139 (262)
.+ +-.+..+.+| +|++++-.....
T Consensus 287 ~l----I~~e~l~~MK-~gailINvgrg~ 310 (435)
T 3gvp_A 287 NV----VTREHLDRMK-NSCIVCNMGHSN 310 (435)
T ss_dssp CS----BCHHHHHHSC-TTEEEEECSSTT
T ss_pred cc----CCHHHHHhcC-CCcEEEEecCCC
Confidence 11 1135667889 898877544443
No 464
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=73.63 E-value=7.1 Score=32.14 Aligned_cols=87 Identities=10% Similarity=0.037 Sum_probs=51.2
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF 112 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~ 112 (262)
.+|.=||||. | ..+..|++.|.+|++.|.+++.++.+.+. ++.... +.++. -...|+|+..-.-. .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~~-------~~~~~---~~~aDvvi~~vp~~-~ 71 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-GASAAR-------SARDA---VQGADVVISMLPAS-Q 71 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCEECS-------SHHHH---HTTCSEEEECCSCH-H
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCeEcC-------CHHHH---HhCCCeEEEECCCH-H
Confidence 4677889996 3 34556777899999999999988877654 333221 12111 12368888653210 0
Q ss_pred ChhHHHH---HHHHhhcCCCeEEEE
Q 037961 113 DLPQFYK---QVKWVLKKPSGVIAA 134 (262)
Q Consensus 113 d~~~~l~---~~~r~Lk~pgG~l~i 134 (262)
+.+.++. ++...++ +|.+++-
T Consensus 72 ~~~~v~~~~~~~~~~l~-~~~~vi~ 95 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIA-PGTLVLE 95 (302)
T ss_dssp HHHHHHHSSSCGGGSSC-SSCEEEE
T ss_pred HHHHHHcCchhHHhcCC-CCcEEEE
Confidence 1223444 4555677 6665544
No 465
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=73.54 E-value=1 Score=36.88 Aligned_cols=40 Identities=28% Similarity=0.429 Sum_probs=28.4
Q ss_pred CceeeEEEccc----cccC-C-------hhHHHHHHHHhhcCCCeEEEEEecC
Q 037961 98 SSVDLVTIASA----LHWF-D-------LPQFYKQVKWVLKKPSGVIAAWTYT 138 (262)
Q Consensus 98 ~~~D~V~~~~~----~~~~-d-------~~~~l~~~~r~Lk~pgG~l~i~~~~ 138 (262)
+.||+|+++-. .||. . ...+-..+.+.|+ |||++++-.|+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~-pGGtlv~~aYG 261 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLK-PGGSLLIRAYG 261 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEE-EEEEEEEEECC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcC-CCceEEEEeec
Confidence 79999998643 3443 1 2224557888999 99999996665
No 466
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=73.48 E-value=2.7 Score=33.76 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=50.1
Q ss_pred eEEEEcCcc-c-HhHHHHHhhCC----eEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 36 LAWDVGTRS-G-QAAASLAQIYQ----HVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
+|.=||||. | ..+..|++.+. +|++.|.+++-++.+.+..++.... + .++. -...|+|+..-
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~-~------~~e~---~~~aDvVilav-- 71 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTT-D------NNEV---AKNADILILSI-- 71 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECS-C------HHHH---HHHCSEEEECS--
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeC-C------hHHH---HHhCCEEEEEe--
Confidence 567789886 3 34556667776 9999999999887765322333321 1 1111 12369988654
Q ss_pred ccCChhHHHHHHHHhhcCCCeEEE
Q 037961 110 HWFDLPQFYKQVKWVLKKPSGVIA 133 (262)
Q Consensus 110 ~~~d~~~~l~~~~r~Lk~pgG~l~ 133 (262)
.--+...+++++...++ ||..++
T Consensus 72 ~~~~~~~v~~~l~~~l~-~~~~vv 94 (247)
T 3gt0_A 72 KPDLYASIINEIKEIIK-NDAIIV 94 (247)
T ss_dssp CTTTHHHHC---CCSSC-TTCEEE
T ss_pred CHHHHHHHHHHHHhhcC-CCCEEE
Confidence 22245567777777787 666554
No 467
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=73.25 E-value=14 Score=29.47 Aligned_cols=77 Identities=21% Similarity=0.153 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc-------C-CCceEEeCCCCchhhhhhc----cCCC
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK-------L-PNIRYQLTPTMSITELEQN----VATQ 97 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~-------~-~~~~~~~~~~~~~~~~~~~----~~~~ 97 (262)
.+.++|=.|++.|. ++..|++.|++|+.++.+++.++...+ . .++.++..|.-+..+.+.. .-.-
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 45678888887763 455677789999999999887765432 1 5677777772111222211 1112
Q ss_pred CceeeEEEcccc
Q 037961 98 SSVDLVTIASAL 109 (262)
Q Consensus 98 ~~~D~V~~~~~~ 109 (262)
+..|+++.+-++
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999977665
No 468
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=72.99 E-value=15 Score=30.59 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=48.3
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc-----CC--CceEEeCCCCchhhhhhc----cCCCC
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK-----LP--NIRYQLTPTMSITELEQN----VATQS 98 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~--~~~~~~~~~~~~~~~~~~----~~~~~ 98 (262)
.+.+||=.|++.|. ++..|++.|++|++++.++.-++.+.+ .. ++.++..|..+.+++... .-..+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 34678888887663 455566789999999999887765432 12 677777772112222221 11125
Q ss_pred ceeeEEEcccc
Q 037961 99 SVDLVTIASAL 109 (262)
Q Consensus 99 ~~D~V~~~~~~ 109 (262)
.+|+++.+-++
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999977664
No 469
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=72.83 E-value=4.7 Score=34.03 Aligned_cols=41 Identities=24% Similarity=0.131 Sum_probs=31.5
Q ss_pred CCCeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 33 KRNLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 33 ~~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
...+|.=||+|+ | .++..++..|.+|+..|++++.++.+.+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~ 47 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALE 47 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 346788999997 2 3566677889999999999999887653
No 470
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=72.75 E-value=11 Score=30.71 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=46.5
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc-----CCCceEEeCCCCchhhhhhcc---CCCCcee
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK-----LPNIRYQLTPTMSITELEQNV---ATQSSVD 101 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~D 101 (262)
.++++|=.|++.|. .+..|++.|++|+.+|.+++.++.+.+ ..++.++..|.-+..+.+.+- ...+..|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 45678888877653 455666789999999998766554332 246777777711111111110 0115789
Q ss_pred eEEEcccc
Q 037961 102 LVTIASAL 109 (262)
Q Consensus 102 ~V~~~~~~ 109 (262)
+++.+-+.
T Consensus 112 ~lvnnAg~ 119 (275)
T 4imr_A 112 ILVINASA 119 (275)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99977664
No 471
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.71 E-value=31 Score=26.73 Aligned_cols=74 Identities=22% Similarity=0.118 Sum_probs=46.0
Q ss_pred eEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcC--CCceEEeCCCCchhhhhhcc-CCCCceeeEEEcccc
Q 037961 36 LAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKL--PNIRYQLTPTMSITELEQNV-ATQSSVDLVTIASAL 109 (262)
Q Consensus 36 ~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~D~V~~~~~~ 109 (262)
++|=.|++.|. ++..|++.|++|+.++.+++.++.+.+. .++.+...|..+..+++.+- --...+|+++.+-+.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~ 82 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGS 82 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCc
Confidence 46777776652 4455667799999999999888766542 46777777722222232221 112345998876554
No 472
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=72.68 E-value=7.7 Score=32.01 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=54.9
Q ss_pred CeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC
Q 037961 35 NLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF 112 (262)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~ 112 (262)
.+|.=||+|. | ..+..|++.|.+|++.|.+++-++.+.+. ++... .+.++. . . .|+|+..-.-. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~-------~~~~~~--~-~-aDvvi~~vp~~-~ 82 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GATLA-------DSVADV--A-A-ADLIHITVLDD-A 82 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCEEC-------SSHHHH--T-T-SSEEEECCSSH-H
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCEEc-------CCHHHH--H-h-CCEEEEECCCh-H
Confidence 4678899986 3 34556667789999999999887776653 33322 122222 1 2 69988653310 0
Q ss_pred ChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 113 DLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 113 d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
+.+.+++++...++ ||.+++-.+
T Consensus 83 ~~~~v~~~l~~~l~-~g~ivv~~s 105 (296)
T 3qha_A 83 QVREVVGELAGHAK-PGTVIAIHS 105 (296)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEECS
T ss_pred HHHHHHHHHHHhcC-CCCEEEEeC
Confidence 23446678888888 777665433
No 473
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=72.30 E-value=15 Score=30.70 Aligned_cols=89 Identities=9% Similarity=0.028 Sum_probs=56.2
Q ss_pred CCeEEEEcCcccHhHHHHHh----hCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccc
Q 037961 34 RNLAWDVGTRSGQAAASLAQ----IYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASAL 109 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~ 109 (262)
.++++=+|+ |..+..+++ .+. |+++|.+++.++ +++ .++.++.+|..+.+..+... -...|.|++...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~--i~~a~~vi~~~~- 186 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKAN--VRGARAVIVDLE- 186 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTC--STTEEEEEECCS-
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcC--hhhccEEEEcCC-
Confidence 456777776 556666554 467 999999999998 665 47888888833333344443 345888887532
Q ss_pred ccCChhH--HHHHHHHhhcCCCeEEEE
Q 037961 110 HWFDLPQ--FYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 110 ~~~d~~~--~l~~~~r~Lk~pgG~l~i 134 (262)
|.+. ......+-+. |...++.
T Consensus 187 ---~d~~n~~~~~~ar~~~-~~~~iia 209 (336)
T 1lnq_A 187 ---SDSETIHCILGIRKID-ESVRIIA 209 (336)
T ss_dssp ---SHHHHHHHHHHHHTTC-TTSEEEE
T ss_pred ---ccHHHHHHHHHHHHHC-CCCeEEE
Confidence 2222 4445566677 6656555
No 474
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=72.22 E-value=18 Score=32.09 Aligned_cols=88 Identities=9% Similarity=0.088 Sum_probs=52.8
Q ss_pred CeEEEEcCcc--cHhHHHHHhhCCeEEEEcCCHHH--------HHHHhcC------------CCceEEeCCCCchhhhhh
Q 037961 35 NLAWDVGTRS--GQAAASLAQIYQHVIATDTSPKQ--------LKFAIKL------------PNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~--------~~~a~~~------------~~~~~~~~~~~~~~~~~~ 92 (262)
.+|.=||+|+ +..+..++..|.+|++.|++++. ++.+.+. .++.+.. +.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~-------dl~a 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITS-------DFHK 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEES-------CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeC-------CHHH
Confidence 5688899997 34566777889999999999982 1111111 1122221 1221
Q ss_pred ccCCCCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 93 NVATQSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 93 ~~~~~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
-...|+|+.+-.-.---...+++++...++ |+-+|+.
T Consensus 128 ----l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-~~aIlas 164 (460)
T 3k6j_A 128 ----LSNCDLIVESVIEDMKLKKELFANLENICK-STCIFGT 164 (460)
T ss_dssp ----CTTCSEEEECCCSCHHHHHHHHHHHHTTSC-TTCEEEE
T ss_pred ----HccCCEEEEcCCCCHHHHHHHHHHHHhhCC-CCCEEEe
Confidence 234799986543111012347888999998 7776654
No 475
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.05 E-value=24 Score=28.37 Aligned_cols=103 Identities=16% Similarity=0.084 Sum_probs=59.2
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCC------------HHHHHHHh-----cCCCceEEeCCCCchhhhhh
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTS------------PKQLKFAI-----KLPNIRYQLTPTMSITELEQ 92 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s------------~~~~~~a~-----~~~~~~~~~~~~~~~~~~~~ 92 (262)
.++++|=-|++.|. .+..|++.|++|+.+|.+ ...++.+. ...++.++..|.-+..++..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 35678888887663 455667789999999987 44444332 12467777777222222221
Q ss_pred c----cCCCCceeeEEEcccccc----CChhH--------------HHHHHHHhhcCCCeEEEEEe
Q 037961 93 N----VATQSSVDLVTIASALHW----FDLPQ--------------FYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 93 ~----~~~~~~~D~V~~~~~~~~----~d~~~--------------~l~~~~r~Lk~pgG~l~i~~ 136 (262)
. .-.-+..|+++.+-+... .+.+. +.+.+...|+ .+|.++...
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~g~iv~is 153 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT-SGASIITTG 153 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-TTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-cCcEEEEec
Confidence 1 001246899997655432 12211 3445666677 788877633
No 476
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=72.02 E-value=3.8 Score=33.17 Aligned_cols=78 Identities=12% Similarity=-0.035 Sum_probs=44.8
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhc----cCCCCceeeEEE
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQN----VATQSSVDLVTI 105 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~V~~ 105 (262)
.++++|=.|++.|. ++..|++.|++|+.++.++.-+....+..++.++..|.-+..+.+.+ .-..+..|+++.
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 45677888876652 44556677999999998875543222222467777772111222211 111257899997
Q ss_pred ccccc
Q 037961 106 ASALH 110 (262)
Q Consensus 106 ~~~~~ 110 (262)
+-+..
T Consensus 106 nAg~~ 110 (260)
T 3gem_A 106 NASEW 110 (260)
T ss_dssp CCCCC
T ss_pred CCCcc
Confidence 66543
No 477
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.84 E-value=40 Score=27.60 Aligned_cols=89 Identities=18% Similarity=0.097 Sum_probs=51.7
Q ss_pred CCeEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcccccc
Q 037961 34 RNLAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHW 111 (262)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~ 111 (262)
..+|.=||+|. | ..+..|++.|.+|++.|.+++.++.+.+. +......+ .++. -...|+|+..-.-..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~~------~~e~---~~~aDvvi~~vp~~~ 76 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE-GACGAAAS------AREF---AGVVDALVILVVNAA 76 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSEEESS------STTT---TTTCSEEEECCSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc-CCccccCC------HHHH---HhcCCEEEEECCCHH
Confidence 35678889886 3 34556677799999999999988877654 22221111 1111 134698886533110
Q ss_pred CChhHHH---HHHHHhhcCCCeEEEE
Q 037961 112 FDLPQFY---KQVKWVLKKPSGVIAA 134 (262)
Q Consensus 112 ~d~~~~l---~~~~r~Lk~pgG~l~i 134 (262)
..+.++ +++...|+ ||..++-
T Consensus 77 -~~~~v~~~~~~l~~~l~-~g~ivv~ 100 (303)
T 3g0o_A 77 -QVRQVLFGEDGVAHLMK-PGSAVMV 100 (303)
T ss_dssp -HHHHHHC--CCCGGGSC-TTCEEEE
T ss_pred -HHHHHHhChhhHHhhCC-CCCEEEe
Confidence 112233 44456777 7766654
No 478
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=71.31 E-value=16 Score=29.41 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=49.1
Q ss_pred CeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHh-cCCCceEEeCCCCchhhhhhc----cCCCCceeeEEEc
Q 037961 35 NLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAI-KLPNIRYQLTPTMSITELEQN----VATQSSVDLVTIA 106 (262)
Q Consensus 35 ~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~V~~~ 106 (262)
++||=-|++.|. .+..|++.|++|+.+|.+++.++... +..++.+...|.-+..+.+.+ .-.-+..|+++.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 467777877763 56667788999999999998887654 456777787772222222221 1123578999876
Q ss_pred ccc
Q 037961 107 SAL 109 (262)
Q Consensus 107 ~~~ 109 (262)
-+.
T Consensus 83 AG~ 85 (247)
T 3ged_A 83 ACR 85 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 479
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=71.14 E-value=27 Score=27.78 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=44.5
Q ss_pred CCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHh----c---CCCceEEeCCCCchhhhhhcc----CCCCc
Q 037961 34 RNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAI----K---LPNIRYQLTPTMSITELEQNV----ATQSS 99 (262)
Q Consensus 34 ~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~----~---~~~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (262)
+.++|=.|++.|. ++..|++.|++|++++.++..++... + ..++.++..|..+..+++..- -.-+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 4577888876552 44556667999999999987655332 1 124566666621112222210 01146
Q ss_pred eeeEEEccccc
Q 037961 100 VDLVTIASALH 110 (262)
Q Consensus 100 ~D~V~~~~~~~ 110 (262)
+|+++.+-+..
T Consensus 87 id~lv~~Ag~~ 97 (267)
T 2gdz_A 87 LDILVNNAGVN 97 (267)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999776543
No 480
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=70.93 E-value=36 Score=27.35 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=48.3
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCH--HHHHHHhc-CCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSP--KQLKFAIK-LPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~--~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
+++++|=-|.+.|. .++.|++.|++|+.+|.+. +.++..++ ..++..+..|.-+....+.. +..+..|+++.+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~-~~~g~iDiLVNN 86 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDS-FTDAGFDILVNN 86 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTS-STTTCCCEEEEC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHH-HHhCCCCEEEEC
Confidence 45677777877763 5666778899999999874 33444333 35667777772111222222 356789999977
Q ss_pred cccc
Q 037961 107 SALH 110 (262)
Q Consensus 107 ~~~~ 110 (262)
-.+.
T Consensus 87 AGi~ 90 (247)
T 4hp8_A 87 AGII 90 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6553
No 481
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=70.72 E-value=11 Score=38.09 Aligned_cols=80 Identities=11% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCCeEEEEcCcccHhHHHHHhhCC-e-EEEEcCCHHHHHHHhc-CCCceEEeCC--CCc----hhhhhh---ccCC-CCc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIYQ-H-VIATDTSPKQLKFAIK-LPNIRYQLTP--TMS----ITELEQ---NVAT-QSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~-v~~vD~s~~~~~~a~~-~~~~~~~~~~--~~~----~~~~~~---~~~~-~~~ 99 (262)
+..+++|+-||.|.++..+...|. + +.++|+++..++.-+. .++..+..+| .+. .++... ..++ .+.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~~ 929 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGD 929 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTTT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccccCc
Confidence 345789999999999999988886 4 6799999999886654 4666666555 110 011111 0112 357
Q ss_pred eeeEEEccccccC
Q 037961 100 VDLVTIASALHWF 112 (262)
Q Consensus 100 ~D~V~~~~~~~~~ 112 (262)
+|+|+....++-+
T Consensus 930 vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 930 VEMLCGGPPCQGF 942 (1330)
T ss_dssp CSEEEECCCCTTT
T ss_pred cceEEecCCCccc
Confidence 9999988766644
No 482
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=70.51 E-value=20 Score=29.68 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=53.4
Q ss_pred eEEEEcCcc-c-HhHHHHHhhCCeEEEEcC--CHHHHHHHhcCC-----CceE---EeCCCCchhhhhhccCCCCceeeE
Q 037961 36 LAWDVGTRS-G-QAAASLAQIYQHVIATDT--SPKQLKFAIKLP-----NIRY---QLTPTMSITELEQNVATQSSVDLV 103 (262)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~--s~~~~~~a~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~D~V 103 (262)
+|.=+|+|. | .++..|++.+.+|+++|. +++.++..++.. ++.+ ...+ .++..+. -...|+|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---~~~~D~v 75 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW---PEQLEKC---LENAEVV 75 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC---GGGHHHH---HTTCSEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEec---HHhHHHH---HhcCCEE
Confidence 466788886 3 344556677999999999 988887766531 1110 0000 0012111 1357999
Q ss_pred EEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 104 TIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
+..-.-+ ....+++++.. |+ ||..++.
T Consensus 76 i~~v~~~--~~~~v~~~i~~-l~-~~~~vv~ 102 (335)
T 1txg_A 76 LLGVSTD--GVLPVMSRILP-YL-KDQYIVL 102 (335)
T ss_dssp EECSCGG--GHHHHHHHHTT-TC-CSCEEEE
T ss_pred EEcCChH--HHHHHHHHHhc-CC-CCCEEEE
Confidence 8765443 45667788888 88 7766554
No 483
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=70.22 E-value=19 Score=31.21 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=27.1
Q ss_pred eEEEEcCcc-c-HhHHHHHhhCCeEEEEcCCHHHHHHHhc
Q 037961 36 LAWDVGTRS-G-QAAASLAQIYQHVIATDTSPKQLKFAIK 73 (262)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (262)
.|.=+|+|. | .++..|++ +.+|+++|.+++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~ 40 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN 40 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc
Confidence 456688875 3 33445566 8899999999998887764
No 484
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=70.07 E-value=3.1 Score=36.73 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=29.7
Q ss_pred CCeEEEEcCcccHhHHHHHhh-------CCeEEEEcCCHHHHHH
Q 037961 34 RNLAWDVGTRSGQAAASLAQI-------YQHVIATDTSPKQLKF 70 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~-------~~~v~~vD~s~~~~~~ 70 (262)
.-.++|+|+|+|.+...+.+. ..+++.||+|+.+.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~ 181 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRAR 181 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHH
Confidence 468999999999998887642 2379999999987654
No 485
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=69.77 E-value=8.6 Score=29.77 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=53.4
Q ss_pred CeEEEEcCcc--cH-hHHHHH-hhCCeEEEEcCCHH-HHHHHh-cCCCceEEeCCCCchhhhhhccCCCCceeeEEEccc
Q 037961 35 NLAWDVGTRS--GQ-AAASLA-QIYQHVIATDTSPK-QLKFAI-KLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASA 108 (262)
Q Consensus 35 ~~vlDvGcG~--G~-~~~~l~-~~~~~v~~vD~s~~-~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~ 108 (262)
++||=.|++. |. ++..|+ +.|.+|++++.++. .++... ...++.++.+|..+..++...- ..+|+|+.+-+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV---TNAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH---TTCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH---cCCCEEEEcCC
Confidence 3477777433 32 334456 57899999999987 655442 4467888888722222333321 25799997765
Q ss_pred cccCChhHHHHHHHHhhcCCC-eEEEE
Q 037961 109 LHWFDLPQFYKQVKWVLKKPS-GVIAA 134 (262)
Q Consensus 109 ~~~~d~~~~l~~~~r~Lk~pg-G~l~i 134 (262)
..-++ .+.+.+.+++.| |.++.
T Consensus 83 ~~n~~----~~~~~~~~~~~~~~~iv~ 105 (221)
T 3r6d_A 83 ESGSD----MASIVKALSRXNIRRVIG 105 (221)
T ss_dssp CCHHH----HHHHHHHHHHTTCCEEEE
T ss_pred CCChh----HHHHHHHHHhcCCCeEEE
Confidence 43222 445555554123 45654
No 486
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=69.36 E-value=9.2 Score=34.68 Aligned_cols=68 Identities=7% Similarity=-0.014 Sum_probs=47.5
Q ss_pred CCeEEEEcCcccHhHHHHH----hhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEE
Q 037961 34 RNLAWDVGTRSGQAAASLA----QIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTI 105 (262)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~ 105 (262)
.++++=+|+| ..+..++ +.+.+|+.+|.+++.++.++...++.++.+|..+....+.... ..+|.|++
T Consensus 127 ~~hviI~G~g--~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i--~~a~~vi~ 198 (565)
T 4gx0_A 127 RGHILIFGID--PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRV--AAARSIIA 198 (565)
T ss_dssp CSCEEEESCC--HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTG--GGCSEEEE
T ss_pred CCeEEEECCC--hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCc--ccCCEEEE
Confidence 4567777766 4444444 3578999999999999988765578899998433344555543 35788876
No 487
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=69.21 E-value=25 Score=28.29 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred CChHHHHHHHHhhC-CCCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCC-HHHHHHHh----c-CCCceEEeCCCCch
Q 037961 18 NYPKELFKLIASKT-PKRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTS-PKQLKFAI----K-LPNIRYQLTPTMSI 87 (262)
Q Consensus 18 ~yp~~~~~~l~~~~-~~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s-~~~~~~a~----~-~~~~~~~~~~~~~~ 87 (262)
.|+...+..+.... -.++++|=.|++.|. ++..|++.|++|+.++.+ ...++... + ..++.++..|..+.
T Consensus 14 ~~~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 93 (271)
T 3v2g_A 14 GTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA 93 (271)
T ss_dssp ------CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cccccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 34444444444333 256788989987763 455677789999988654 34333322 1 24667777772222
Q ss_pred hhhhhc----cCCCCceeeEEEccccccC------Chh--------------HHHHHHHHhhcCCCeEEEEEe
Q 037961 88 TELEQN----VATQSSVDLVTIASALHWF------DLP--------------QFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 88 ~~~~~~----~~~~~~~D~V~~~~~~~~~------d~~--------------~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
++++.. .-.-+..|+++.+-+.... +.+ .+.+.+.+.|+ .+|.++...
T Consensus 94 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~g~iv~is 165 (271)
T 3v2g_A 94 EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG-DGGRIITIG 165 (271)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-TTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 222221 0112468999976554321 111 14566777888 788877643
No 488
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=69.00 E-value=14 Score=29.11 Aligned_cols=76 Identities=16% Similarity=0.165 Sum_probs=44.6
Q ss_pred CCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCC-CCc--hhhhhhccCCCCceeeEEEcc
Q 037961 34 RNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTP-TMS--ITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 34 ~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~D~V~~~~ 107 (262)
++++|=.|++.|. ++..|++ +.+|++++.++..++...+..++.+...| .-. ...+...--.-+.+|+++.+-
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~A 83 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAA 83 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4567878876652 3334444 78999999999988877766677777776 100 000111111235789999766
Q ss_pred ccc
Q 037961 108 ALH 110 (262)
Q Consensus 108 ~~~ 110 (262)
+..
T Consensus 84 g~~ 86 (245)
T 3e9n_A 84 AVA 86 (245)
T ss_dssp ---
T ss_pred CcC
Confidence 553
No 489
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=68.98 E-value=20 Score=29.30 Aligned_cols=101 Identities=17% Similarity=0.098 Sum_probs=63.7
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc--CCCceEEeCCCCchhhhhhc----cCCCCceeeE
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK--LPNIRYQLTPTMSITELEQN----VATQSSVDLV 103 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~V 103 (262)
+++++|=-|++.|. .+..|++.|++|+.+|.+++.++.+.+ ..++..+..|.-+..+.+.+ .-.-+..|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45778888888773 566677889999999999998876543 24566677772222222221 1123679999
Q ss_pred EEccccccC------ChhH--------------HHHHHHHhhcCCCeEEEE
Q 037961 104 TIASALHWF------DLPQ--------------FYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 104 ~~~~~~~~~------d~~~--------------~l~~~~r~Lk~pgG~l~i 134 (262)
+.+-+.... +.+. ..+.+...|+ .+|.++.
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~-~~G~IIn 157 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA-RGSSVVL 157 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEE
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh-hCCeEEE
Confidence 876554321 1111 3456677788 6777665
No 490
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=68.76 E-value=4.2 Score=33.79 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=50.2
Q ss_pred eEEEEcCccc--HhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccCC
Q 037961 36 LAWDVGTRSG--QAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWFD 113 (262)
Q Consensus 36 ~vlDvGcG~G--~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~d 113 (262)
+|-=||.|.- ..+..|++.|.+|++.|.+++-++...+. +..... +..+. -...|+|++... +
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~~-------s~~e~---~~~~dvvi~~l~----~ 71 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GATVVE-------NAIDA---ITPGGIVFSVLA----D 71 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTT-TCEECS-------SGGGG---CCTTCEEEECCS----S
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CCeEeC-------CHHHH---HhcCCceeeecc----c
Confidence 4666788762 34556777899999999998866544432 222221 11121 134688876432 2
Q ss_pred hhH----HHHHHHHhhcCCCeEEEEEecCCCcccHHHHHhh
Q 037961 114 LPQ----FYKQVKWVLKKPSGVIAAWTYTMPEINESVGAVF 150 (262)
Q Consensus 114 ~~~----~l~~~~r~Lk~pgG~l~i~~~~~~~~~~~~~~~~ 150 (262)
... +..++...++ +|++++-.+...+....++.+..
T Consensus 72 ~~~~~~v~~~~~~~~~~-~~~iiid~sT~~p~~~~~~~~~~ 111 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLG-KDGVHVSMSTISPETSRQLAQVH 111 (297)
T ss_dssp HHHHHHHSCHHHHHHHC-TTCEEEECSCCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhhcC-CCeEEEECCCCChHHHHHHHHHH
Confidence 222 2345777888 88877654444444334444433
No 491
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=68.69 E-value=11 Score=30.76 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=51.9
Q ss_pred CeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccccC
Q 037961 35 NLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALHWF 112 (262)
Q Consensus 35 ~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~~~ 112 (262)
.+|.=+|||. |. ++..|+..+.+|+++|.+++.++...+. ++... . +.++. -...|+|+....-..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~-~------~~~~~---~~~~D~vi~~v~~~~- 73 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAETA-S------TAKAI---AEQCDVIITMLPNSP- 73 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC-S------SHHHH---HHHCSEEEECCSSHH-
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCeec-C------CHHHH---HhCCCEEEEECCCHH-
Confidence 3678899986 33 4455666788999999999988776654 33321 1 11111 023688886543110
Q ss_pred ChhHHH---HHHHHhhcCCCeEEEE
Q 037961 113 DLPQFY---KQVKWVLKKPSGVIAA 134 (262)
Q Consensus 113 d~~~~l---~~~~r~Lk~pgG~l~i 134 (262)
+.+.++ +++...++ ||..++-
T Consensus 74 ~~~~~~~~~~~l~~~l~-~~~~vv~ 97 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAK-PGTVLID 97 (299)
T ss_dssp HHHHHHHSTTCHHHHCC-TTCEEEE
T ss_pred HHHHHHhCcchHhhcCC-CCCEEEE
Confidence 123344 45667788 7876643
No 492
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=68.67 E-value=17 Score=28.90 Aligned_cols=77 Identities=6% Similarity=-0.104 Sum_probs=45.9
Q ss_pred CCCeEEEEcCc--cc---HhHHHHHhhCCeEEEEcCCHHHHHHHh----cCCCceEEeCCCCchhhhhhc----cCCCCc
Q 037961 33 KRNLAWDVGTR--SG---QAAASLAQIYQHVIATDTSPKQLKFAI----KLPNIRYQLTPTMSITELEQN----VATQSS 99 (262)
Q Consensus 33 ~~~~vlDvGcG--~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 99 (262)
++++||=.|++ .| .++..|++.|++|+.++.+....+.++ +...+.++..|.-+..+.+.+ .-.-+.
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56788888875 33 234556677999999988754433332 345677887772222222221 111257
Q ss_pred eeeEEEcccc
Q 037961 100 VDLVTIASAL 109 (262)
Q Consensus 100 ~D~V~~~~~~ 109 (262)
.|+++.+-++
T Consensus 93 id~lv~nAg~ 102 (271)
T 3ek2_A 93 LDGLVHSIGF 102 (271)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999976554
No 493
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=68.50 E-value=24 Score=31.54 Aligned_cols=87 Identities=20% Similarity=0.154 Sum_probs=51.4
Q ss_pred CCCeEEEEcCcc-cH-hHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEccccc
Q 037961 33 KRNLAWDVGTRS-GQ-AAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIASALH 110 (262)
Q Consensus 33 ~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~~~~ 110 (262)
.+.+|+=+|+|. |. .+..++..|++|+++|+++.-...+... .+.+. + .++. ...+|+|+....-.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~-g~dv~--~------lee~---~~~aDvVi~atG~~ 331 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATME-GLQVL--T------LEDV---VSEADIFVTTTGNK 331 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC--C------GGGT---TTTCSEEEECSSCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-CCccC--C------HHHH---HHhcCEEEeCCCCh
Confidence 678889999882 22 3334445699999999998876665543 22221 1 1111 23579887544322
Q ss_pred cCChhHHHHHHHHhhcCCCeEEEEEe
Q 037961 111 WFDLPQFYKQVKWVLKKPSGVIAAWT 136 (262)
Q Consensus 111 ~~d~~~~l~~~~r~Lk~pgG~l~i~~ 136 (262)
.+ +-.+..+.++ +|+.++-..
T Consensus 332 ~v----l~~e~l~~mk-~gaiVvNaG 352 (488)
T 3ond_A 332 DI----IMLDHMKKMK-NNAIVCNIG 352 (488)
T ss_dssp CS----BCHHHHTTSC-TTEEEEESS
T ss_pred hh----hhHHHHHhcC-CCeEEEEcC
Confidence 22 1133567789 898776544
No 494
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=68.44 E-value=16 Score=34.58 Aligned_cols=87 Identities=25% Similarity=0.376 Sum_probs=56.8
Q ss_pred CeEEEEcCccc--HhHHHHHhhCCeEEEEcCCHHHHHHHhcC---------------------CCceEEeCCCCchhhhh
Q 037961 35 NLAWDVGTRSG--QAAASLAQIYQHVIATDTSPKQLKFAIKL---------------------PNIRYQLTPTMSITELE 91 (262)
Q Consensus 35 ~~vlDvGcG~G--~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------~~~~~~~~~~~~~~~~~ 91 (262)
.+|--||+|+- ..+..++..|.+|+..|++++.++.+++. ..+.+. .+.+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 389 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS-------SSTK 389 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEE-------SCGG
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhccc-------CcHH
Confidence 57889999983 45566777899999999999998876531 011111 1111
Q ss_pred hccCCCCceeeEEEccccccCC-hhHHHHHHHHhhcCCCeEEEE
Q 037961 92 QNVATQSSVDLVTIASALHWFD-LPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 92 ~~~~~~~~~D~V~~~~~~~~~d-~~~~l~~~~r~Lk~pgG~l~i 134 (262)
.+ ...|+|+-+ .+.-++ ..++++++..+++ |+-+|+-
T Consensus 390 ~l----~~aDlVIEA-V~E~l~iK~~vf~~le~~~~-~~aIlAS 427 (742)
T 3zwc_A 390 EL----STVDLVVEA-VFEDMNLKKKVFAELSALCK-PGAFLCT 427 (742)
T ss_dssp GG----GSCSEEEEC-CCSCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred HH----hhCCEEEEe-ccccHHHHHHHHHHHhhcCC-CCceEEe
Confidence 11 246888844 222233 3448999999999 8877765
No 495
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=68.27 E-value=18 Score=31.22 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=57.3
Q ss_pred HHHHHHHhhCCCCCeEEEEcCcccHhHH-HHHhhCCe--EEEEcCCHHHHHHHhcCCC--ceEEeCCCCchhhhhhccCC
Q 037961 22 ELFKLIASKTPKRNLAWDVGTRSGQAAA-SLAQIYQH--VIATDTSPKQLKFAIKLPN--IRYQLTPTMSITELEQNVAT 96 (262)
Q Consensus 22 ~~~~~l~~~~~~~~~vlDvGcG~G~~~~-~l~~~~~~--v~~vD~s~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~ 96 (262)
++.+.|......+.+|+--|+|+...+. ..+..+.+ ...+|.+|.- +.+..++ +.++.-+ . +.
T Consensus 307 ~l~~~l~~~k~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k--~g~~~~g~~ipi~~p~--------~--~~ 374 (416)
T 4e2x_A 307 ELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDK--QNRLTPGAHIPVRPAS--------A--FS 374 (416)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGG--TTEECTTTCCEEEEGG--------G--CC
T ss_pred HHHHHHHHHHHcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccc--cCccCCCCCCcCCCHH--------H--Hh
Confidence 4444444444567788889988744433 23333322 3368988762 2223455 6666432 1 13
Q ss_pred CCceeeEEEccccccCChhHHHHHHHHhhcCCCeEEEE
Q 037961 97 QSSVDLVTIASALHWFDLPQFYKQVKWVLKKPSGVIAA 134 (262)
Q Consensus 97 ~~~~D~V~~~~~~~~~d~~~~l~~~~r~Lk~pgG~l~i 134 (262)
....|.|+.. .|.-.++.++++...+. -||.+++
T Consensus 375 ~~~~d~vl~~---~~~~~~ei~~~~~~~~~-~g~~~~~ 408 (416)
T 4e2x_A 375 DPYPDYALLF---AWNHAEEIMAKEQEFHQ-AGGRWIL 408 (416)
T ss_dssp SSCCSEEEES---CGGGHHHHHHHCHHHHH-TTCEEEE
T ss_pred hcCCCEEEEe---cchhHHHHHHHHHHHHh-cCCEEEE
Confidence 4567877653 22226778888888888 8999987
No 496
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=68.19 E-value=29 Score=26.90 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=44.6
Q ss_pred CCCeEEEEcCcccHhHH----HHHhhCCeEEEEcCCHHHHHHHhcCCCc-eEEeCC-CCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQAAA----SLAQIYQHVIATDTSPKQLKFAIKLPNI-RYQLTP-TMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~----~l~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
.+++||=.|+. |..+. .|++.|.+|++++.++.-++.... .++ .++.+| . .++... -+.+|+|+.+
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~---~~~~~~---~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE---EDFSHA---FASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT---SCCGGG---GTTCSEEEEC
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH---HHHHHH---HcCCCEEEEC
Confidence 45678888753 44444 445569999999999887765543 367 888877 3 122221 2368999976
Q ss_pred cccc
Q 037961 107 SALH 110 (262)
Q Consensus 107 ~~~~ 110 (262)
-+..
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6654
No 497
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=67.92 E-value=18 Score=29.99 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=47.3
Q ss_pred CCCeEEEEcCcccHhHHHHHhhC------CeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEc
Q 037961 33 KRNLAWDVGTRSGQAAASLAQIY------QHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIA 106 (262)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~ 106 (262)
.+..|+=+|||.|.....|++.+ -+.+++|+.+. ....+..+++... .
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~-~~~l~~~~NV~li-------------------------~ 113 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH-DPILNGLRDVTLV-------------------------T 113 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC-CGGGTTCTTEEEE-------------------------E
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc-hhhhcCCCcEEEE-------------------------e
Confidence 35799999999999999998753 26778888543 1111222232222 2
Q ss_pred cccccCChhHHHHHHHHhhcCCCeEEEEEecCCC
Q 037961 107 SALHWFDLPQFYKQVKWVLKKPSGVIAAWTYTMP 140 (262)
Q Consensus 107 ~~~~~~d~~~~l~~~~r~Lk~pgG~l~i~~~~~~ 140 (262)
.. +| +.-+.+..+.+. ...+|.||..+..
T Consensus 114 ~f---vd-e~dl~~l~~~~~-~~~iLLISDIRS~ 142 (307)
T 3mag_A 114 RF---VD-EEYLRSIKKQLH-PSKIILISDVRSK 142 (307)
T ss_dssp CC---CC-HHHHHHHHHHHT-TSCEEEEECCCC-
T ss_pred cc---CC-HHHHHHHHHhcc-CCCEEEEEEecCC
Confidence 11 12 334566667777 7788888887643
No 498
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=67.45 E-value=8.7 Score=32.74 Aligned_cols=70 Identities=16% Similarity=0.040 Sum_probs=42.2
Q ss_pred CCCeEEEEcCc-ccHhHHHHHhhCCeEEEEcCCHHHHHHHhcCCCceEEeCCCCchhhhhhccCCCCceeeEEEcc
Q 037961 33 KRNLAWDVGTR-SGQAAASLAQIYQHVIATDTSPKQLKFAIKLPNIRYQLTPTMSITELEQNVATQSSVDLVTIAS 107 (262)
Q Consensus 33 ~~~~vlDvGcG-~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~V~~~~ 107 (262)
+.++||=+||| .|......+....+|+..|.+..-++.+++. +..+..|..+...+... -..+|+|++..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~--~~~~~~d~~d~~~l~~~---~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF--ATPLKVDASNFDKLVEV---MKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT--SEEEECCTTCHHHHHHH---HTTCSEEEECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc--CCcEEEecCCHHHHHHH---HhCCCEEEEec
Confidence 55679999996 3554444444567899999999988887653 34444442111222222 13579998743
No 499
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=66.94 E-value=39 Score=26.35 Aligned_cols=76 Identities=13% Similarity=0.060 Sum_probs=44.2
Q ss_pred CCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc----CCCceEEeCCCCchhhhhhcc----CCCCceee
Q 037961 34 RNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK----LPNIRYQLTPTMSITELEQNV----ATQSSVDL 102 (262)
Q Consensus 34 ~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~ 102 (262)
+.++|=.|++.|. ++..|++.|++|++++.++..++...+ ..++.++..|..+..++...- -.-+.+|+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4567777765542 344455679999999999876654332 146777777721112222110 01136899
Q ss_pred EEEcccc
Q 037961 103 VTIASAL 109 (262)
Q Consensus 103 V~~~~~~ 109 (262)
|+.+-+.
T Consensus 86 li~~Ag~ 92 (251)
T 1zk4_A 86 LVNNAGI 92 (251)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9876654
No 500
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=66.82 E-value=17 Score=29.48 Aligned_cols=78 Identities=18% Similarity=0.092 Sum_probs=49.8
Q ss_pred CCCeEEEEcCcccH---hHHHHHhhCCeEEEEcCCHHHHHHHhc-----CCCceEEeCCCCchhhhhh----ccCCCCce
Q 037961 33 KRNLAWDVGTRSGQ---AAASLAQIYQHVIATDTSPKQLKFAIK-----LPNIRYQLTPTMSITELEQ----NVATQSSV 100 (262)
Q Consensus 33 ~~~~vlDvGcG~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 100 (262)
+++++|=-|++.|. .+..|++.|++|+.+|.+++.++.+.+ ..++..+..|.-+..+.+. ..-.-+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 45677777877763 456677789999999999988765432 2456666666211222222 21234679
Q ss_pred eeEEEccccc
Q 037961 101 DLVTIASALH 110 (262)
Q Consensus 101 D~V~~~~~~~ 110 (262)
|+++.+-...
T Consensus 88 DiLVNNAG~~ 97 (255)
T 4g81_D 88 DILINNAGIQ 97 (255)
T ss_dssp CEEEECCCCC
T ss_pred cEEEECCCCC
Confidence 9999876554
Done!