BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037967
         (66 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp
          Length = 1019

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 44/64 (68%)

Query: 2   AVGKDDVEIIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEG 61
           A+ + +  I+K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + G
Sbjct: 46  AIQRIEDHIVKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIPG 105

Query: 62  LAHF 65
           L+HF
Sbjct: 106 LSHF 109


>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With
           Two Bound Peptides
          Length = 1019

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 44/64 (68%)

Query: 2   AVGKDDVEIIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEG 61
           A+ + +  I+K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + G
Sbjct: 46  AIQRIEDHIVKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIPG 105

Query: 62  LAHF 65
           L+HF
Sbjct: 106 LSHF 109


>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin)
          Length = 978

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 44/64 (68%)

Query: 2  AVGKDDVEIIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEG 61
          A+ + +  I+K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + G
Sbjct: 5  AIQRIEDHIVKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIPG 64

Query: 62 LAHF 65
          L+HF
Sbjct: 65 LSHF 68


>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
          Enzyme
 pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
          Enzyme
 pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
          (ide) In Complex With Compund 41367
 pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
          (ide) In Complex With Compund 41367
          Length = 990

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 81


>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amylin
 pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amylin
          Length = 969

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 12 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 68


>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Insulin-Like Growth Factor Ii
 pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Insulin-Like Growth Factor Ii
          Length = 990

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 81


>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
 pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
 pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
           Complex With Amyloid-Beta (1-42)
 pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
           Complex With Amyloid-Beta (1-42)
          Length = 1019

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10  IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
           I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 54  ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 110


>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Insulin
 pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Insulin
 pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Iodinated Insulin
 pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Iodinated Insulin
 pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
          With Macrophage Inflammatory Protein 1 Alpha
 pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
          With Macrophage Inflammatory Protein 1 Alpha
 pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Ubiquitin
 pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Ubiquitin
 pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme
          (Ide) In Complex With Human B-Type Natriuretic Peptide
          (Bnp)
 pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme
          (Ide) In Complex With Human B-Type Natriuretic Peptide
          (Bnp)
 pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme
          (Ide) In Complex With Human Atrial Natriuretic Peptide
          (Anp)
 pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme
          (Ide) In Complex With Human Atrial Natriuretic Peptide
          (Anp)
 pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
          Inhibitor Compound 41367
 pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
          Inhibitor Compound 41367
          Length = 990

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 81


>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex
 pdb|3CWW|B Chain B, Crystal Structure Of Ide-Bradykinin Complex
          Length = 990

 Score = 65.5 bits (158), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HFL
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 81


>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
 pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
          Length = 990

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHF 65
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HF
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHF 80


>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amyloid-Beta (1-40)
 pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amyloid-Beta (1-40)
 pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amylin
 pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Amylin
 pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Glucagon
 pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
          Complex With Glucagon
 pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
          Enzyme In Complex With Insulin B Chain
 pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
          Enzyme In Complex With Insulin B Chain
 pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
          Complex With Insulin B Chain
 pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
          Complex With Insulin B Chain
 pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
          Complexed With Co-Purified Peptides.
 pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
          Complexed With Co-Purified Peptides.
 pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Transforming Growth Factor-Alpha
 pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
          Complex With Transforming Growth Factor-Alpha
          Length = 990

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHF 65
          I K   DKR+YR L L N ++VLLISDP  DK +A+++V +G+  DP  + GL+HF
Sbjct: 25 ITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHF 80


>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin
          Length = 939

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 36/57 (63%)

Query: 10 IIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66
          I K   D RQY+ + L N + VLL+SDP A K  +++ V VG+  DP   +GLAH+L
Sbjct: 11 IRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYL 67


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.139    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,814,934
Number of Sequences: 62578
Number of extensions: 49001
Number of successful extensions: 131
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119
Number of HSP's gapped (non-prelim): 12
length of query: 66
length of database: 14,973,337
effective HSP length: 37
effective length of query: 29
effective length of database: 12,657,951
effective search space: 367080579
effective search space used: 367080579
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)