Query 037967
Match_columns 66
No_of_seqs 162 out of 1013
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 10:13:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q2l_A Protease III; hydrolase 99.6 1.9E-15 6.7E-20 108.8 4.7 60 7-66 8-67 (939)
2 3cww_A Insulysin, insulin-degr 99.5 3.8E-15 1.3E-19 107.9 4.7 62 5-66 20-81 (990)
3 3eoq_A Putative zinc protease; 99.3 5.4E-13 1.8E-17 88.4 4.0 47 20-66 2-48 (406)
4 3hdi_A Processing protease; CA 99.3 1.2E-12 4E-17 86.9 4.1 47 20-66 2-48 (421)
5 3go9_A Insulinase family prote 99.2 4.8E-12 1.6E-16 86.9 4.2 50 17-66 23-74 (492)
6 3ami_A Zinc peptidase; alpha/b 99.2 1.1E-11 3.7E-16 83.0 5.0 49 18-66 5-53 (445)
7 1hr6_A Alpha-MPP, mitochondria 99.2 2E-11 6.8E-16 82.7 4.1 49 17-66 3-51 (475)
8 3amj_B Zinc peptidase inactive 99.1 7.1E-11 2.4E-15 78.1 4.8 48 19-66 3-50 (424)
9 1pp9_A Ubiquinol-cytochrome C 99.1 5.7E-11 1.9E-15 79.5 4.2 51 15-66 9-59 (446)
10 1hr6_B Beta-MPP, mitochondrial 99.1 7.6E-11 2.6E-15 78.4 4.8 49 18-66 5-53 (443)
11 3gwb_A Peptidase M16 inactive 99.1 1.7E-10 5.8E-15 76.3 4.7 52 14-66 8-59 (434)
12 3cx5_A Cytochrome B-C1 complex 99.0 1.4E-10 4.9E-15 76.5 3.3 45 22-66 3-47 (431)
13 1pp9_B Ubiquinol-cytochrome C 99.0 3.1E-10 1.1E-14 75.2 4.8 51 15-66 19-69 (439)
14 2fge_A Atprep2;, zinc metallop 98.7 5.2E-09 1.8E-13 76.2 3.8 51 11-66 29-79 (995)
15 3d3y_A Uncharacterized protein 98.4 1.1E-07 3.9E-12 62.3 2.5 41 23-66 6-46 (425)
16 3s5m_A Falcilysin; M16 metallo 98.3 3.5E-07 1.2E-11 69.3 2.8 54 11-66 78-131 (1193)
17 3cx5_B Cytochrome B-C1 complex 97.5 5.8E-05 2E-09 48.7 3.0 35 29-66 1-35 (352)
18 1q2l_A Protease III; hydrolase 94.8 0.012 4.2E-07 42.5 2.0 45 21-65 501-548 (939)
19 2fge_A Atprep2;, zinc metallop 94.3 0.062 2.1E-06 39.3 4.7 41 23-65 556-596 (995)
20 3cww_A Insulysin, insulin-degr 88.2 0.19 6.6E-06 36.6 1.6 45 21-65 520-566 (990)
21 3uze_C Envelope protein; dengu 61.9 2.7 9.1E-05 25.1 0.9 40 23-64 75-114 (139)
22 3aqy_A Beta-1,3-glucan-binding 46.2 32 0.0011 19.2 3.8 29 20-49 8-37 (106)
23 3ie4_A GRAM-negative binding p 40.5 24 0.00084 19.7 2.6 29 20-48 6-35 (107)
24 2jn4_A Hypothetical protein FI 36.7 23 0.00078 19.4 2.0 18 21-38 57-74 (87)
25 2kha_A Beta-1,3-glucan-binding 31.0 59 0.002 18.8 3.3 31 18-49 15-46 (130)
26 2vqe_L 30S ribosomal protein S 29.8 43 0.0015 19.7 2.6 46 12-57 47-94 (135)
27 3od9_A Putative exported prote 24.6 1.1E+02 0.0039 17.9 3.8 22 19-40 5-26 (135)
28 4gie_A Prostaglandin F synthas 24.4 36 0.0012 21.5 1.7 15 18-32 11-25 (290)
29 3uaj_B Envelope protein; dengu 22.8 24 0.00084 24.6 0.7 41 23-65 369-409 (433)
30 3s5m_A Falcilysin; M16 metallo 20.5 1.5E+02 0.0051 23.0 4.5 29 26-54 724-752 (1193)
No 1
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=99.56 E-value=1.9e-15 Score=108.78 Aligned_cols=60 Identities=43% Similarity=0.696 Sum_probs=57.1
Q ss_pred CcceeecCCCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 7 DVEIIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 7 ~~~~~k~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
.+.++||+.|.+.|+..+|+|||+|++++++..+.+++++++++||++||++.+|+||||
T Consensus 8 ~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~l~v~~Gs~~e~~~~~GlAH~l 67 (939)
T 1q2l_A 8 QETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYL 67 (939)
T ss_dssp CSCCCCCTTCCCEEEEEEETTSCEEEEEECTTCSSEEEEEEESCCGGGCCGGGTTHHHHH
T ss_pred cccCcCCCCCCcceEEEEecCCCEEEEEECCCCCceEEEEEeCccCCCCCCCCCchHHHH
Confidence 456899999999999999999999999999999999999999999999999999999985
No 2
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Probab=99.54 E-value=3.8e-15 Score=107.88 Aligned_cols=62 Identities=47% Similarity=0.805 Sum_probs=58.8
Q ss_pred CCCcceeecCCCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 5 KDDVEIIKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 5 ~~~~~~~k~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
+....++||..|++.|+..+|+|||+|++++++..+++++++++++||++||++.+|+||||
T Consensus 20 ~~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAH~l 81 (990)
T 3cww_A 20 RIGNHITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFL 81 (990)
T ss_dssp EECSCCCCCTTCCCEEEEEEETTCCEEEEEECTTCSEEEEEEEESCCGGGSCTTSTTHHHHH
T ss_pred ccCCcccCCCCCCcceEEEEeCCCCEEEEEECCCCCcEEEEEEecccCCCCCCCCCChHHHH
Confidence 45567999999999999999999999999999999999999999999999999999999985
No 3
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=99.35 E-value=5.4e-13 Score=88.44 Aligned_cols=47 Identities=32% Similarity=0.429 Sum_probs=45.2
Q ss_pred eEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 20 YRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 20 ~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
++..+|+|||+|++++++..+.+++++++++||++||++.+|+||||
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~l 48 (406)
T 3eoq_A 2 FREAELRNGLRVIAEVVPGARSVALGYFVKTGARDETKEESGVSHFL 48 (406)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEEESCSGGGSCGGGTTHHHHH
T ss_pred ceeEEcCCCCEEEEEECCCCCeEEEEEEEccccCCCCCCCCCHHHHH
Confidence 67899999999999999999999999999999999999999999985
No 4
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=99.31 E-value=1.2e-12 Score=86.89 Aligned_cols=47 Identities=17% Similarity=0.348 Sum_probs=45.2
Q ss_pred eEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 20 YRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 20 ~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
|+..+|+||++|++++++..+.+++.+++++||++||++.+|+|||+
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~l 48 (421)
T 3hdi_A 2 INTMTLDNGVRIITEKMSTVRSVSIGIWVGTGSRYESAEENGISHFL 48 (421)
T ss_dssp CEEEECTTSCEEEEEECTTCSEEEEEEEESCCGGGCCGGGTTHHHHH
T ss_pred ceEEEcCCCCEEEEEECCCCCEEEEEEEEccccCCCCCCCCcHHHHH
Confidence 78899999999999999999999999999999999999999999985
No 5
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=99.24 E-value=4.8e-12 Score=86.94 Aligned_cols=50 Identities=22% Similarity=0.408 Sum_probs=45.5
Q ss_pred ccceEEEEccCCCEEEEEEcCCC--CeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 17 KRQYRRLVLKNSLQVLLISDPDA--DKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 17 ~~~~~~~~L~NGl~v~~~~~~~~--~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
++.++..+|+|||+|++++++.. +.+++.+++++||++|++++.|+|||+
T Consensus 23 dp~~~~~~L~NGl~v~~~~~~~~~~~~v~~~l~~~~Gs~~e~~~~~Glahll 74 (492)
T 3go9_A 23 DPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLL 74 (492)
T ss_dssp CTTEEEEECTTSCEEEEEECTTSTTSCEEEEEEESCCGGGCCGGGTTHHHHH
T ss_pred CCCeEEEECCCCCEEEEEECCCCCCCeEEEEEEEecccCCCCCCCcCHHHHH
Confidence 46799999999999999998754 579999999999999999999999985
No 6
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=99.22 E-value=1.1e-11 Score=82.97 Aligned_cols=49 Identities=27% Similarity=0.312 Sum_probs=46.3
Q ss_pred cceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 18 RQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 18 ~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
..++..+|+||++|++++++..+.+++.+++++||++||++..|+|||+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~~~v~~~~~~~~Gs~~e~~~~~Glah~l 53 (445)
T 3ami_A 5 ASTFETTLPNGLKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHAL 53 (445)
T ss_dssp GGEEEEECTTSCEEEEEECTTSSEEEEEEEESCCGGGCCTTCTTHHHHH
T ss_pred cCcEEEECCCCCEEEEEECCCCCeEEEEEEEeeccCCCCCCCccHHHHH
Confidence 4688899999999999999999999999999999999999999999985
No 7
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A*
Probab=99.16 E-value=2e-11 Score=82.66 Aligned_cols=49 Identities=22% Similarity=0.362 Sum_probs=44.8
Q ss_pred ccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 17 KRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 17 ~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
++.++..+|+||++|++.+.+. +.+++.+++++||++|+++..|+||||
T Consensus 3 ~~~~~~~~L~NGl~v~~~~~~~-~~~~~~l~~~~Gs~~e~~~~~Glah~l 51 (475)
T 1hr6_A 3 TDNFKLSSLANGLKVATSNTPG-HFSALGLYIDAGSRFEGRNLKGCTHIL 51 (475)
T ss_dssp TTCCEEEECTTSCEEEEESCCC-SSEEEEEEESCCGGGCTTTTTTHHHHH
T ss_pred CCCceEEECCCCCEEEEEeCCC-CEEEEEEEEccccCCCCCCCCcHHHHH
Confidence 4678899999999999988774 899999999999999999999999985
No 8
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=99.11 E-value=7.1e-11 Score=78.07 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=45.5
Q ss_pred ceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 19 QYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 19 ~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
.++..+|+||++|++.+++..+.+++.+++++|+.+||++..|+|||+
T Consensus 3 ~~~~~~L~NGl~v~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~g~ahll 50 (424)
T 3amj_B 3 KIEHWTAPSGAQVYYVENRTLPMLDVQVDFDAGSAREPADQVGVASMT 50 (424)
T ss_dssp CCEEEECTTSCEEEEEECCSSSEEEEEEEESCSGGGSCTTSTTHHHHH
T ss_pred ccEEEECCCCcEEEEEECCCCCEEEEEEEEecCCccCCCccchHHHHH
Confidence 478899999999999999999999999999999999999999999985
No 9
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=99.10 E-value=5.7e-11 Score=79.50 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=46.0
Q ss_pred CCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 15 TDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 15 ~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
...+.++..+|+||++|++.+.+. +.+++.+++++|+++||++..|+|||+
T Consensus 9 ~~~~~~~~~~L~NGl~v~~~~~~~-~~~~~~l~~~~Gs~~e~~~~~Glahll 59 (446)
T 1pp9_A 9 QSVPETQVSQLDNGLRVASEQSSQ-PTCTVGVWIDAGSRYESEKNNGAGYFV 59 (446)
T ss_dssp TTSCCCEEEECTTCCEEEEEECSC-SEEEEEEEESCSGGGCCTTTTTHHHHH
T ss_pred ccccCceEEECCCCCEEEEEeCCC-CEEEEEEEEccccCCCCCCCCcHHHHH
Confidence 334678899999999999998885 799999999999999999999999985
No 10
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=99.10 E-value=7.6e-11 Score=78.42 Aligned_cols=49 Identities=27% Similarity=0.331 Sum_probs=45.6
Q ss_pred cceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 18 RQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 18 ~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
+.++..+|+||++|++.+++..+.+++.+++++|+++||++..|+|||+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~Gs~~e~~~~~G~ah~l 53 (443)
T 1hr6_B 5 PGTRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFL 53 (443)
T ss_dssp CCCEEEECTTSCEEEEEECSSCSEEEEEEEEECSGGGCCTTTTTHHHHH
T ss_pred CCceEEECCCCCEEEEEECCCCCEEEEEEEEccccCCCCCCCCcHHHHH
Confidence 5678899999999999999987799999999999999999999999985
No 11
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}
Probab=99.05 E-value=1.7e-10 Score=76.29 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=45.7
Q ss_pred CCCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 14 RTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 14 ~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
....+.++..+|+||++|++.+++..+++++.+++++|+.+| ++..|+|||+
T Consensus 8 ~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~Gs~~e-~~~~g~a~ll 59 (434)
T 3gwb_A 8 SHRNLNVQTWSTAEGAKVLFVEARELPMFDLRLIFAAGSSQD-GNAPGVALLT 59 (434)
T ss_dssp ----CCCEEEECTTCCEEEEEECCSSSEEEEEEEESCSGGGC-TTSTTHHHHH
T ss_pred cccCCCCEEEEcCCCeEEEEEECCCCCEEEEEEEEecccccC-CcchhHHHHH
Confidence 334567899999999999999999999999999999999999 8999999985
No 12
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A*
Probab=99.02 E-value=1.4e-10 Score=76.47 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=42.7
Q ss_pred EEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 22 RLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 22 ~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
..+|+||++|++.+++..+.+++.+++++|+++||++..|+|||+
T Consensus 3 ~~~L~NGl~v~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~g~ahll 47 (431)
T 3cx5_A 3 VTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLW 47 (431)
T ss_dssp CEEEESSSEEEEEECTTCSSEEEEEEESCCGGGSCTTTTTHHHHH
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEEEecCccCCCCCCcchHHHH
Confidence 568999999999999999999999999999999999999999985
No 13
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ...
Probab=99.01 E-value=3.1e-10 Score=75.16 Aligned_cols=51 Identities=16% Similarity=0.196 Sum_probs=46.6
Q ss_pred CCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 15 TDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 15 ~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
.+...++..+|+||++|++.++ ..+.+++.+++++|+++|+++..|+|||+
T Consensus 19 ~~~~~~~~~~L~nGl~v~~~~~-~~~~~~~~~~~~~Gs~~e~~~~~g~a~ll 69 (439)
T 1pp9_B 19 PHPQDLEFTRLPNGLVIASLEN-YAPASRIGLFIKAGSRYENSNNLGTSHLL 69 (439)
T ss_dssp C-CCCCEEEECTTSCEEEEECC-CCSEEEEEEEESCSGGGCCTTSTTHHHHH
T ss_pred ccCCCceEEECCCCcEEEEEeC-CCceEEEEEEEeccccCCCCCcCcHHHHH
Confidence 3567899999999999999999 78999999999999999999999999985
No 14
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=98.75 E-value=5.2e-09 Score=76.19 Aligned_cols=51 Identities=20% Similarity=0.209 Sum_probs=44.7
Q ss_pred eecCCCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 11 IKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 11 ~k~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
..+..+.+.|++.+|+|||+|+++++++.+. ++.+|+++||++.+|+||||
T Consensus 29 ~~~~~~~~~~~~~~l~nGl~v~~~~~~~~~~-----~~~vg~~~e~~~~~GlAH~l 79 (995)
T 2fge_A 29 FISECKSKAILFKHKKTGCEVMSVSNEDENK-----VFGVVFRTPPKDSTGIPHIL 79 (995)
T ss_dssp EETTTTEEEEEEEETTTCCEEEEEECSCSSE-----EEEEEEECCCSSSSCHHHHH
T ss_pred ecccccceEEEEEECCCCCEEEEEEcCCCcc-----EEEEEeCCCCcCCCChHHHH
Confidence 4566777889999999999999999998776 36789999999999999985
No 15
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}
Probab=98.40 E-value=1.1e-07 Score=62.31 Aligned_cols=41 Identities=7% Similarity=0.045 Sum_probs=37.7
Q ss_pred EEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 23 LVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 23 ~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
++|+||++|++.+++..+.+++.+++++|+.+|+ .|+|||+
T Consensus 6 ~~L~nG~~v~~~~~~~~~~~~~~~~~~~g~~~e~---~g~a~ll 46 (425)
T 3d3y_A 6 VQLVKGVNLHVIPTEKYKTVRLLVRFNTRLNHET---ITKRTLL 46 (425)
T ss_dssp EEEETTEEEEEEECSSCSEEEEEEEEEEECCTTT---HHHHHHH
T ss_pred eeccCCcEEEEEecCccceEEEEEEEeCCCCccc---hhHHHHH
Confidence 7899999999999999999999999999998776 6999984
No 16
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=98.26 E-value=3.5e-07 Score=69.32 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=42.7
Q ss_pred eecCCCccceEEEEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 11 IKPRTDKRQYRRLVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 11 ~k~~~d~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
.-|..+.+.|++..|+||++|+++++++.+.+.. ++.+|+.+||++.+|+||||
T Consensus 78 ~~p~~~~~~~~~~~l~nGl~vl~i~~~~~~~~~~--~f~vg~~tep~~~~GvAH~l 131 (1193)
T 3s5m_A 78 YNEEFKMTYTVYQHKKAKTQVISLGTNDPLDVEQ--AFAFYVKTLTHSGKGIPHIL 131 (1193)
T ss_dssp EETTTTEEEEEEEETTTCCEEEEEEECCTTCCCE--EEEEEEECCCSSSSCHHHHH
T ss_pred cCCCccccceEEEECCCCCEEEEEECCCCCeEEE--EEEEEECCCCCCCchHHHHH
Confidence 3455566788999999999999999998754333 34567788999999999985
No 17
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B*
Probab=97.51 E-value=5.8e-05 Score=48.67 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=29.0
Q ss_pred CEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceeeC
Q 037967 29 LQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHFL 66 (66)
Q Consensus 29 l~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHfl 66 (66)
|+|+. +++..+.+++++++++||++| +..|+|||+
T Consensus 1 l~v~~-~~~~~~~v~~~~~~~~Gs~~e--~~~G~ah~l 35 (352)
T 3cx5_B 1 LTVSA-RDAPTKISTLAVKVHGGSRYA--TKDGVAHLL 35 (352)
T ss_dssp CEEEE-ECCSCSEEEEEEEESCSGGGC--SSTTHHHHH
T ss_pred CEEEE-eeCCCceEEEEEEEeeeccCC--CcccHHHHH
Confidence 56776 455578999999999999997 479999985
No 18
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=94.81 E-value=0.012 Score=42.50 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=37.6
Q ss_pred EEEEccCCCEEEEEEcCCC---CeEEEEEEEcccCCCCCCCCCcceee
Q 037967 21 RRLVLKNSLQVLLISDPDA---DKCAASMNVSVGAFCDPVGLEGLAHF 65 (66)
Q Consensus 21 ~~~~L~NGl~v~~~~~~~~---~~~~~~~~v~~Gs~~ep~~~~GlAHf 65 (66)
..++|.||++|++.+++.. |+..+.+.+.+|...+++...|++++
T Consensus 501 ~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~~~~~~~~~l 548 (939)
T 1q2l_A 501 ELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFAL 548 (939)
T ss_dssp EEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSSHHHHHHHHH
T ss_pred EEEEECCCceEeecCCCccCCCCcEEEEEEEeCCcccCCHHHHHHHHH
Confidence 4678999999999999864 39999999999998887766677765
No 19
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=94.29 E-value=0.062 Score=39.27 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=32.9
Q ss_pred EEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceee
Q 037967 23 LVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHF 65 (66)
Q Consensus 23 ~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHf 65 (66)
..+.||++|++.+++..+.+.+.+.++.|++ +++..|++++
T Consensus 556 ~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l 596 (995)
T 2fge_A 556 VGDINGVKVLRHDLFTNDIIYTEVVFDIGSL--KHELLPLVPL 596 (995)
T ss_dssp EEESSSSEEEEEECCCSSEEEEEEEEECTTS--CTTTGGGHHH
T ss_pred eeecCCceEEEEecCCCCeEEEEEEeeCCCC--CHHHhhhHHH
Confidence 3458999999999998899999999999987 4455555544
No 20
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Probab=88.19 E-value=0.19 Score=36.57 Aligned_cols=45 Identities=7% Similarity=-0.108 Sum_probs=35.0
Q ss_pred EEEEccCCCEEEEEEcCC--CCeEEEEEEEcccCCCCCCCCCcceee
Q 037967 21 RRLVLKNSLQVLLISDPD--ADKCAASMNVSVGAFCDPVGLEGLAHF 65 (66)
Q Consensus 21 ~~~~L~NGl~v~~~~~~~--~~~~~~~~~v~~Gs~~ep~~~~GlAHf 65 (66)
...++.||++|++.+++. .|...+.+.+..+...+++...|++++
T Consensus 520 ~~~~~~ng~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~L 566 (990)
T 3cww_A 520 ALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYL 566 (990)
T ss_dssp EEEEECSSEEEEEEECSSCCCSEEEEEEEEECGGGTSSHHHHHHHHH
T ss_pred eeeecCCCceEeeccCCccCCCcEEEEEEEeCCCCCCCHHHHHHHHH
Confidence 457789999999999887 458888888888777777665566554
No 21
>3uze_C Envelope protein; dengue antibody neutralization, immune system; HET: EPE; 2.04A {Dengue virus 3}
Probab=61.86 E-value=2.7 Score=25.05 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=15.0
Q ss_pred EEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCccee
Q 037967 23 LVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAH 64 (66)
Q Consensus 23 ~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAH 64 (66)
...|=|-.++++-.-. ..--.=|.+.||+.|.+++.|.+|
T Consensus 75 ~ePPfGDSyI~VG~G~--~~L~~qW~k~GS~~~~~~~~~~~~ 114 (139)
T 3uze_C 75 AEPPFGESNIVIGIGD--KALKINWYRKGPFEDDDDKAGWSH 114 (139)
T ss_dssp EECCSEEEEEEESSTT--TSEEEEEEECCCC-----------
T ss_pred EeCCCCceEEEEccCC--CceeEeeccCCCCccccccccccC
Confidence 3444455544443321 112235789999999999999998
No 22
>3aqy_A Beta-1,3-glucan-binding protein; beta-sandwich, immune receptor, sugar bindi protein; 1.58A {Plodia interpunctella} PDB: 3aqz_A* 3aqx_A* 2rqe_A
Probab=46.22 E-value=32 Score=19.15 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=21.8
Q ss_pred eEEEEc-cCCCEEEEEEcCCCCeEEEEEEEc
Q 037967 20 YRRLVL-KNSLQVLLISDPDADKCAASMNVS 49 (66)
Q Consensus 20 ~~~~~L-~NGl~v~~~~~~~~~~~~~~~~v~ 49 (66)
.+...| |.|++|.+- .|+....++.+.++
T Consensus 8 ~~ve~l~PkG~~vSip-~pGi~lfafh~~iN 37 (106)
T 3aqy_A 8 AKLEAIYPKGLRVSIP-DDGFSLFAFHGKLN 37 (106)
T ss_dssp CEEEEESSSCEEEEEE-CSSCSEEEEEEEES
T ss_pred cEEEEeCCCcEEEEEe-CCCcEEEEEEEEec
Confidence 344444 599999987 88888888877774
No 23
>3ie4_A GRAM-negative binding protein 3; immunoglobulin fold, immune system; 1.45A {Drosophila melanogaster}
Probab=40.45 E-value=24 Score=19.75 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=19.0
Q ss_pred eEEEEc-cCCCEEEEEEcCCCCeEEEEEEE
Q 037967 20 YRRLVL-KNSLQVLLISDPDADKCAASMNV 48 (66)
Q Consensus 20 ~~~~~L-~NGl~v~~~~~~~~~~~~~~~~v 48 (66)
.+...| |.|++|.+-..|+....++...+
T Consensus 6 ~~ve~l~P~G~rvsipD~pgi~lf~fh~~i 35 (107)
T 3ie4_A 6 AKIDVFYPKGFEVSIPDEEGITLFAFHGKL 35 (107)
T ss_dssp CEEEECSSSCEEEEEECCTTEEEEEEEEEE
T ss_pred cEEEEeCCCCEEEEEcCCCCCEEEEEEEEe
Confidence 334444 69999997666766666665555
No 24
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=36.73 E-value=23 Score=19.42 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=12.9
Q ss_pred EEEEccCCCEEEEEEcCC
Q 037967 21 RRLVLKNSLQVLLISDPD 38 (66)
Q Consensus 21 ~~~~L~NGl~v~~~~~~~ 38 (66)
-.++|.||.++.+-+.+.
T Consensus 57 G~vtLaNGw~l~lp~l~~ 74 (87)
T 2jn4_A 57 GKVTLANGWQLELPAMAA 74 (87)
T ss_dssp SEEEETTSCEEECCCCSS
T ss_pred cEEEECCccEEEeCCCCC
Confidence 457888888888765443
No 25
>2kha_A Beta-1,3-glucan-binding protein; glycoprotein, immune response, innate immunity, secreted, sugar binding protein; NMR {Plodia interpunctella}
Probab=31.02 E-value=59 Score=18.81 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=22.9
Q ss_pred cceEEEEc-cCCCEEEEEEcCCCCeEEEEEEEc
Q 037967 18 RQYRRLVL-KNSLQVLLISDPDADKCAASMNVS 49 (66)
Q Consensus 18 ~~~~~~~L-~NGl~v~~~~~~~~~~~~~~~~v~ 49 (66)
+..+...| |.|++|.+- .|+....++...++
T Consensus 15 P~~~ve~l~PkGf~VSIp-epGi~lFaFh~~iN 46 (130)
T 2kha_A 15 PSAKLEAIYPRGLRVSIP-DDGFSLFAFHGKLN 46 (130)
T ss_dssp CCCEEEEETTTEEEEEEE-CCSCSEEEEEEEES
T ss_pred CCcEEEEeCCCCEEEEEe-CCCcEEEEEEEEcc
Confidence 44444445 599999987 88888888877774
No 26
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=29.85 E-value=43 Score=19.73 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=28.5
Q ss_pred ecCCCccceEEEEccCCCEEEE-EEcCCCCe-EEEEEEEcccCCCCCC
Q 037967 12 KPRTDKRQYRRLVLKNSLQVLL-ISDPDADK-CAASMNVSVGAFCDPV 57 (66)
Q Consensus 12 k~~~d~~~~~~~~L~NGl~v~~-~~~~~~~~-~~~~~~v~~Gs~~ep~ 57 (66)
||-.-.+.+-+.+|.||-+|.. ++..+-.. -.-.+.|+.|..-|-+
T Consensus 47 KPNSA~RK~arVrL~ngk~VtAyIPG~GhnlqEhs~VLVrGgrv~DlP 94 (135)
T 2vqe_L 47 KPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLP 94 (135)
T ss_dssp TTCCCCEECCEEEETTSCEEEEECCSSCCCCCTTCEEEEEECCCTTST
T ss_pred CCchhheeEEEEEcCCCCEEEEEcCCCCCccCcCCEEEEcCCCcCCCC
Confidence 3334457788899999999874 44443222 1234556678777654
No 27
>3od9_A Putative exported protein; beta sandwich, C-terminal helix, hydrolase inhibitor; 1.41A {Aeromonas hydrophila}
Probab=24.55 E-value=1.1e+02 Score=17.90 Aligned_cols=22 Identities=14% Similarity=0.202 Sum_probs=14.2
Q ss_pred ceEEEEccCCCEEEEEEcCCCC
Q 037967 19 QYRRLVLKNSLQVLLISDPDAD 40 (66)
Q Consensus 19 ~~~~~~L~NGl~v~~~~~~~~~ 40 (66)
-++.++||+|..+++-+-.-.|
T Consensus 5 f~k~i~Lp~g~~~VvseG~lEP 26 (135)
T 3od9_A 5 FFKQLTLPSGQVVTVSEGRGEP 26 (135)
T ss_dssp CEEEEECTTSCEEEEEECTTCC
T ss_pred hhhhccCCCCcEEEEecCCCCc
Confidence 3578999999655554444333
No 28
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=24.43 E-value=36 Score=21.55 Aligned_cols=15 Identities=27% Similarity=0.432 Sum_probs=11.6
Q ss_pred cceEEEEccCCCEEE
Q 037967 18 RQYRRLVLKNSLQVL 32 (66)
Q Consensus 18 ~~~~~~~L~NGl~v~ 32 (66)
....++||.||+++-
T Consensus 11 ~~~~~v~Ln~G~~ip 25 (290)
T 4gie_A 11 CNYNCVTLHNSVRMP 25 (290)
T ss_dssp SSSCEEECTTSCEEE
T ss_pred CCCCEEEcCCCCCcc
Confidence 456678999999864
No 29
>3uaj_B Envelope protein; dengue antibody membrane fusion, viral protein-immune system; HET: NAG; 3.23A {Dengue virus 4}
Probab=22.77 E-value=24 Score=24.59 Aligned_cols=41 Identities=17% Similarity=0.073 Sum_probs=12.7
Q ss_pred EEccCCCEEEEEEcCCCCeEEEEEEEcccCCCCCCCCCcceee
Q 037967 23 LVLKNSLQVLLISDPDADKCAASMNVSVGAFCDPVGLEGLAHF 65 (66)
Q Consensus 23 ~~L~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ep~~~~GlAHf 65 (66)
...|=|-.++++-.-. ..--.=|.+-||..|.+++.|.+|-
T Consensus 369 ~epPfGdS~I~vG~g~--~~l~~~W~k~GS~~~~~~~~~~~~~ 409 (433)
T 3uaj_B 369 LEPPFGDSYIVIGVGN--SALTLHWFRKGPFEDDDDKAGWSHP 409 (433)
T ss_dssp EECCSEEEEEEESSTT--SSEEEEEEECC--------------
T ss_pred EeCCCCceEEEEccCC--CceeEEecCCCCCccccccccccCc
Confidence 3444454444443321 1122357899999999999999983
No 30
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=20.46 E-value=1.5e+02 Score=23.00 Aligned_cols=29 Identities=10% Similarity=0.195 Sum_probs=26.1
Q ss_pred cCCCEEEEEEcCCCCeEEEEEEEcccCCC
Q 037967 26 KNSLQVLLISDPDADKCAASMNVSVGAFC 54 (66)
Q Consensus 26 ~NGl~v~~~~~~~~~~~~~~~~v~~Gs~~ 54 (66)
.||+++++.+.+....+++.+.++.|+..
T Consensus 724 ~~gv~v~~~~~~TNGIvY~~l~fdl~~l~ 752 (1193)
T 3s5m_A 724 EGNVPILVYEMPTTGIVYLQFVFSLDHLT 752 (1193)
T ss_dssp TTCEEEEEEECCCTTEEEEEEEEECTTCC
T ss_pred cCCeEEEEEECCCCCeEEEEEEEECCCCC
Confidence 48999999999999999999999999754
Done!