BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037968
         (115 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6
            PE=1 SV=2
          Length = 4857

 Score = 31.2 bits (69), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 9    LYTIAFAAVVF------VSCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDFFQGSW 60
            LY+  F  V+F       SC + Y+ +  V   D+  LSDV  GN KV  C   +GS+
Sbjct: 1498 LYSSPFDPVLFDLEMSGSSCKNVYNSSIGVQS-DEIDLSDVLSGNGKVSSCTAAEGSF 1554


>sp|Q80Z32|ORC1_RAT Origin recognition complex subunit 1 OS=Rattus norvegicus GN=Orc1
           PE=2 SV=1
          Length = 848

 Score = 30.8 bits (68), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 75  PFIEREFDCLKNGR--PDKLYLKYKWKPTACELPRYKKHL 112
           P++ +  +  +NG   P K Y + +W    CE+P  K+HL
Sbjct: 62  PYVAKLIELFENGSEVPPKKYARVQWFVRFCEIPIPKRHL 101


>sp|Q2VL90|C163A_PIG Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa
           GN=CD163 PE=1 SV=1
          Length = 1115

 Score = 29.6 bits (65), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 21  SCLHQYSDAAKVHDGDDQQLSDVSLGNSKVGGCDF-FQGSW--VRDDAYPLYDTSICPFI 77
           +C HQ        DG D ++  V+ GN  +G  +  FQG W  V DD + +   S+   +
Sbjct: 139 NCTHQQDAGVTCSDGSDLEMGLVNGGNRCLGRIEVKFQGRWGTVCDDNFNINHASV---V 195

Query: 78  EREFDC 83
            ++ +C
Sbjct: 196 CKQLEC 201


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.143    0.472 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,526,530
Number of Sequences: 539616
Number of extensions: 1954228
Number of successful extensions: 3734
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3734
Number of HSP's gapped (non-prelim): 3
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)