Query 037968
Match_columns 115
No_of_seqs 142 out of 548
Neff 4.0
Searched_HMMs 46136
Date Fri Mar 29 06:13:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037968.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037968hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 3.1E-34 6.7E-39 241.6 5.6 67 48-114 48-115 (387)
2 PF14416 PMR5N: PMR5 N termina 100.0 2.2E-33 4.8E-38 181.8 4.9 54 51-104 2-55 (55)
3 PF07172 GRP: Glycine rich pro 66.9 7.6 0.00016 27.3 3.1 13 8-20 6-18 (95)
4 PF12273 RCR: Chitin synthesis 43.1 24 0.00053 25.2 2.5 13 8-20 5-17 (130)
5 PF15183 MRAP: Melanocortin-2 37.6 55 0.0012 23.4 3.5 11 58-68 78-88 (90)
6 PF07771 TSGP1: Tick salivary 36.7 56 0.0012 24.0 3.6 27 49-78 35-66 (120)
7 KOG4682 Uncharacterized conser 35.6 17 0.00037 32.6 0.9 24 76-99 346-374 (488)
8 PF03811 Zn_Tnp_IS1: InsA N-te 25.7 53 0.0012 19.3 1.6 26 73-98 7-32 (36)
9 PF11195 DUF2829: Protein of u 23.3 30 0.00065 23.1 0.2 12 95-106 57-68 (75)
10 PF11105 CCAP: Arthropod cardi 22.1 32 0.00069 26.2 0.2 24 48-71 43-66 (133)
11 cd02859 AMPKbeta_GBD_like AMP- 20.1 86 0.0019 20.5 1.9 16 56-71 54-69 (79)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=3.1e-34 Score=241.57 Aligned_cols=67 Identities=52% Similarity=1.143 Sum_probs=64.4
Q ss_pred CCCCCccceeccEEeCCCCCCcCCCCCC-CcccccchhhcCCCCCCCceeeeecCCCCCCCCCcccCC
Q 037968 48 SKVGGCDFFQGSWVRDDAYPLYDTSICP-FIEREFDCLKNGRPDKLYLKYKWKPTACELPRYKKHLDL 114 (115)
Q Consensus 48 ~~~~~CD~~~G~WV~D~s~PlY~~~~Cp-fi~~~~nC~~nGRpD~~yl~wRWqP~~C~LPrFd~~~fL 114 (115)
.+.+.||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||..||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fL 115 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFL 115 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHH
Confidence 4456899999999999999999999999 999999999999999999999999999999999999997
No 2
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.98 E-value=2.2e-33 Score=181.79 Aligned_cols=54 Identities=56% Similarity=1.371 Sum_probs=52.6
Q ss_pred CCccceeccEEeCCCCCCcCCCCCCCcccccchhhcCCCCCCCceeeeecCCCC
Q 037968 51 GGCDFFQGSWVRDDAYPLYDTSICPFIEREFDCLKNGRPDKLYLKYKWKPTACE 104 (115)
Q Consensus 51 ~~CD~~~G~WV~D~s~PlY~~~~Cpfi~~~~nC~~nGRpD~~yl~wRWqP~~C~ 104 (115)
+.||+|+|+||+|+++|+|++++||||+++|||++|||||++|++|||||++|+
T Consensus 2 ~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 2 KRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 379999999999999999999999999999999999999999999999999997
No 3
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=66.90 E-value=7.6 Score=27.35 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=5.8
Q ss_pred hHHHHHHHHHHHH
Q 037968 8 FLYTIAFAAVVFV 20 (115)
Q Consensus 8 ~l~~~~~~~~~~~ 20 (115)
+|++.++|+++||
T Consensus 6 ~llL~l~LA~lLl 18 (95)
T PF07172_consen 6 FLLLGLLLAALLL 18 (95)
T ss_pred HHHHHHHHHHHHH
Confidence 5544444444444
No 4
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=43.13 E-value=24 Score=25.20 Aligned_cols=13 Identities=15% Similarity=0.214 Sum_probs=5.7
Q ss_pred hHHHHHHHHHHHH
Q 037968 8 FLYTIAFAAVVFV 20 (115)
Q Consensus 8 ~l~~~~~~~~~~~ 20 (115)
|+++|++++|+|+
T Consensus 5 ~~iii~~i~l~~~ 17 (130)
T PF12273_consen 5 FAIIIVAILLFLF 17 (130)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444444
No 5
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=37.63 E-value=55 Score=23.39 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=6.1
Q ss_pred ccEEeCCCCCC
Q 037968 58 GSWVRDDAYPL 68 (115)
Q Consensus 58 G~WV~D~s~Pl 68 (115)
+.|+.+-..|+
T Consensus 78 ~p~~~~~~lpL 88 (90)
T PF15183_consen 78 CPWSHSLGLPL 88 (90)
T ss_pred CCcccccCCCc
Confidence 45666655554
No 6
>PF07771 TSGP1: Tick salivary peptide group 1; InterPro: IPR011694 This entry contains a group of peptides derived from a salivary gland cDNA library of the tick Ixodes scapularis (Black-legged tick) []. Also present are peptides from a related tick species, Ixodes ricinus (Sheep tick). They are characterised by a putative signal peptide, indicative of secretion, and conserved cysteine residues.
Probab=36.74 E-value=56 Score=23.99 Aligned_cols=27 Identities=22% Similarity=0.655 Sum_probs=15.1
Q ss_pred CCCCccce-----eccEEeCCCCCCcCCCCCCCcc
Q 037968 49 KVGGCDFF-----QGSWVRDDAYPLYDTSICPFIE 78 (115)
Q Consensus 49 ~~~~CD~~-----~G~WV~D~s~PlY~~~~Cpfi~ 78 (115)
..+.|+|+ .+.|++-- +. ++..|-+-.
T Consensus 35 ~~~~C~YYC~~~~~~~W~~g~-~~--dGt~C~y~~ 66 (120)
T PF07771_consen 35 NREGCNYYCWNDDTNGWDYGF-YG--DGTPCFYNT 66 (120)
T ss_pred CCCCcEEEcCCCCCCceEEEE-ec--CCCccccCC
Confidence 33579997 45798631 11 344565543
No 7
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=35.62 E-value=17 Score=32.64 Aligned_cols=24 Identities=21% Similarity=0.459 Sum_probs=18.1
Q ss_pred Ccccc---cchhhcCCCCCC--Cceeeee
Q 037968 76 FIERE---FDCLKNGRPDKL--YLKYKWK 99 (115)
Q Consensus 76 fi~~~---~nC~~nGRpD~~--yl~wRWq 99 (115)
-++++ ++|+++||.=.. +..|||-
T Consensus 346 ~lnde~ff~~cmr~gr~l~~~g~k~wrw~ 374 (488)
T KOG4682|consen 346 ELNDEAFFGNCMRCGRKLAKDGEKCWRWT 374 (488)
T ss_pred hcCHHHHHhHHHhhhhhhcCCcceeEEEE
Confidence 45555 799999996544 7789994
No 8
>PF03811 Zn_Tnp_IS1: InsA N-terminal domain; InterPro: IPR003220 Insertion elements are mobile elements in DNA, usually encoding proteins required for transposition, for example transposases. Protein InsA is absolutely required for transposition of insertion element 1. This entry represents a short zinc binding domain found in IS1 InsA family protein. It is found at the N terminus of the protein and may be a DNA-binding domain.; GO: 0006313 transposition, DNA-mediated
Probab=25.68 E-value=53 Score=19.35 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=21.2
Q ss_pred CCCCcccccchhhcCCCCCCCceeee
Q 037968 73 ICPFIEREFDCLKNGRPDKLYLKYKW 98 (115)
Q Consensus 73 ~Cpfi~~~~nC~~nGRpD~~yl~wRW 98 (115)
.||+=.....=.+||+-..+.++||=
T Consensus 7 ~CP~C~s~~~v~k~G~~~~G~qryrC 32 (36)
T PF03811_consen 7 HCPRCQSTEGVKKNGKSPSGHQRYRC 32 (36)
T ss_pred eCCCCCCCCcceeCCCCCCCCEeEec
Confidence 58877776667899999999999874
No 9
>PF11195 DUF2829: Protein of unknown function (DUF2829) ; InterPro: IPR021361 This entry is represented by Bacteriophage 16-3, p046. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=23.29 E-value=30 Score=23.05 Aligned_cols=12 Identities=33% Similarity=0.963 Sum_probs=10.2
Q ss_pred eeeeecCCCCCC
Q 037968 95 KYKWKPTACELP 106 (115)
Q Consensus 95 ~wRWqP~~C~LP 106 (115)
.-+|+|+.|||=
T Consensus 57 ~~~W~Ps~~DlL 68 (75)
T PF11195_consen 57 FSPWQPSQCDLL 68 (75)
T ss_pred eecccCCchhhe
Confidence 578999999974
No 10
>PF11105 CCAP: Arthropod cardioacceleratory peptide 2a; InterPro: IPR024276 Crustacean cardioactive peptide (CCAP), also known as cardioacceleratory peptide 2a, exerts a reversible and dose-dependent cardio-stimulatory effect on the semi-isolated heart of experimental beetles. CCAP also increases free hemolymph sugar concentration in young larvae and adults of the meal-worm beetle [].; PDB: 1Y49_A 1V46_A.
Probab=22.08 E-value=32 Score=26.16 Aligned_cols=24 Identities=29% Similarity=0.530 Sum_probs=4.9
Q ss_pred CCCCCccceeccEEeCCCCCCcCC
Q 037968 48 SKVGGCDFFQGSWVRDDAYPLYDT 71 (115)
Q Consensus 48 ~~~~~CD~~~G~WV~D~s~PlY~~ 71 (115)
++-+-||-|.|==....++|-|..
T Consensus 43 ~KRPFCNAFTGCGrKRs~~~~~pp 66 (133)
T PF11105_consen 43 KKRPFCNAFTGCGRKRSSYPSYPP 66 (133)
T ss_dssp -----SSSSS--------------
T ss_pred ccCccchhhcccCcccccCCCCCC
Confidence 455569999998887776666653
No 11
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD). AMPK is a metabolic stress sensing protein that senses AMP/ATP and has recently been found to act as a glycogen sensor as well. The protein functions as a alpha-beta-gamma heterotrimer. This domain is the glycogen binding domain of the beta subunit.
Probab=20.13 E-value=86 Score=20.47 Aligned_cols=16 Identities=19% Similarity=0.495 Sum_probs=11.8
Q ss_pred eeccEEeCCCCCCcCC
Q 037968 56 FQGSWVRDDAYPLYDT 71 (115)
Q Consensus 56 ~~G~WV~D~s~PlY~~ 71 (115)
.+|+|+.|+..|.-.+
T Consensus 54 Vdg~w~~d~~~~~~~d 69 (79)
T cd02859 54 VDGEWRHSPDLPTETD 69 (79)
T ss_pred ECCEEEeCCCCCccCC
Confidence 4699999987775443
Done!