BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037972
(480 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357452443|ref|XP_003596498.1| Cyclin-D1-1 [Medicago truncatula]
gi|355485546|gb|AES66749.1| Cyclin-D1-1 [Medicago truncatula]
Length = 423
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 28/227 (12%)
Query: 13 YFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKH- 71
YF+VE + + A R A+ +I + S+S+ +++IPYLA+NYFDRF+S+H
Sbjct: 22 YFNVESEFIAATDTFTTPHDILFRNLAVSIIAKLSRSDDPDSFIPYLAMNYFDRFLSQHK 81
Query: 72 -TLPEVLGNVEDDLV-LAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKH-----ALN 124
L +V G E + V L A CL I+ K+R SFS F+ NL R+ + +
Sbjct: 82 LNLEDVEGRTETERVRLIAVSCLTISSKMRTNSFSVDRFL--ENLYRDMNVRITPPMVMR 139
Query: 125 MELQILNGLEWRSRAVVAVNFV----PFFLNISSAKGIKRRHVNRIIIEAQADLSFASCK 180
MEL IL L+W R+V A F+ P+F G KRR +N II++AQ + +FA
Sbjct: 140 MELLILQELQWAMRSVTAFCFLNHYYPYFKKFC---GFKRRSINEIIVQAQGEHTFAHYM 196
Query: 181 PSVIAAAALVHVCKLL-----------LRDENGERPDAKRCRESLID 216
PS IA +A + + ++ + G + K C + ++D
Sbjct: 197 PSHIAISAFLAAAQTKYPSKYSEIAEDIKSKIGLQGQVKECVKKMVD 243
>gi|224078830|ref|XP_002305644.1| predicted protein [Populus trichocarpa]
gi|159025731|emb|CAN88866.1| D6-type cyclin [Populus trichocarpa]
gi|222848608|gb|EEE86155.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 16/188 (8%)
Query: 14 FDVEEKSMPAAGYAY-INEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F E MP+ + + + + F R AI +ILQ S +A+IPYLA+NY DRFIS
Sbjct: 24 FASESDHMPSRNFLHCLKTSGFYVSFRQEAISLILQAQYSCNYDAFIPYLAVNYMDRFIS 83
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQ 128
K +P+ + L L CL +A K+++ FS SDF G + +N MEL
Sbjct: 84 KQEIPQGKPWI---LRLVVISCLSLAAKMKNAHFSVSDF-QGEEAGFIFDTQTINRMELL 139
Query: 129 ILNGLEWRSRAVVAVNFVPFFLNI------SSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
IL+ L WR R++ +FV FF+++ SS++ +K R II +AQ ++ F KPS
Sbjct: 140 ILDALNWRMRSITPFSFVHFFISVLELKDPSSSQPLKDR-ATEIIFKAQNEIKFLEFKPS 198
Query: 183 VIAAAALV 190
++AA+AL+
Sbjct: 199 IVAASALL 206
>gi|297745660|emb|CBI40871.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
FD E M + + A LR AI +ILQ S + +I YLA+NY DRFISK +
Sbjct: 99 FDSESDHMVSQIFLRRFHAEPLRREAIALILQAQYSCNLDNFISYLAVNYVDRFISKKEV 158
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
PE + LV++ CL +A K++ FS+SDF + ++ MEL IL+ L
Sbjct: 159 PEEKPWILRLLVIS---CLSLAAKMKKIDFSYSDFQKDEGFIFD-AQRIHRMELLILSTL 214
Query: 134 EWRSRAVVAVNFVPFFLNI------SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAA 187
WR R++ +FV FF+++ + K +K R +I +A+ ++ KPS+IAA+
Sbjct: 215 NWRMRSITPFSFVYFFISLFELKDPALTKALKDR-ATELIFKARDEIKLLEYKPSIIAAS 273
Query: 188 ALV 190
AL+
Sbjct: 274 ALL 276
>gi|224114109|ref|XP_002316670.1| predicted protein [Populus trichocarpa]
gi|159025733|emb|CAN88867.1| D6-type cyclin [Populus trichocarpa]
gi|222859735|gb|EEE97282.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 16/188 (8%)
Query: 14 FDVEEKSMPAAGYAY-INEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F E MP+ + + + ++F R AI ILQ S + +IPYLA+NY DRFIS
Sbjct: 24 FVSESDHMPSRNFLHCLKTSDFYVSFREEAISRILQAQYSCNYDLFIPYLAVNYMDRFIS 83
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQ 128
+ +P+ + LV++ CL +A K++++ FS S+ + +N MEL
Sbjct: 84 RQEIPQGKPWILRLLVIS---CLSLAAKMKNKHFSISNSQEAEA-GFIFDTQTINRMELL 139
Query: 129 ILNGLEWRSRAVVAVNFVPFFLNI------SSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
+L+ L WR R++ +FV FF+++ SS++ +K R II +AQ ++ F KPS
Sbjct: 140 VLDALNWRMRSITPFSFVHFFVSLFELKDPSSSQPLKDR-ATEIIFKAQNEIKFLEFKPS 198
Query: 183 VIAAAALV 190
+IAA+AL+
Sbjct: 199 IIAASALL 206
>gi|359495729|ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partial [Vitis vinifera]
Length = 327
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
FD E M + + A LR AI +ILQ S + +I YLA+NY DRFISK +
Sbjct: 16 FDSESDHMVSQIFLRRFHAEPLRREAIALILQAQYSCNLDNFISYLAVNYVDRFISKKEV 75
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
PE + LV++ CL +A K++ FS+SDF + ++ MEL IL+ L
Sbjct: 76 PEEKPWILRLLVIS---CLSLAAKMKKIDFSYSDFQKDEGFIFD-AQRIHRMELLILSTL 131
Query: 134 EWRSRAVVAVNFVPFFLNI------SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAA 187
WR R++ +FV FF+++ + K +K R +I +A+ ++ KPS+IAA+
Sbjct: 132 NWRMRSITPFSFVYFFISLFELKDPALTKALKDR-ATELIFKARDEIKLLEYKPSIIAAS 190
Query: 188 ALV 190
AL+
Sbjct: 191 ALL 193
>gi|224116258|ref|XP_002317253.1| predicted protein [Populus trichocarpa]
gi|159025729|emb|CAN88865.1| D6-type cyclin [Populus trichocarpa]
gi|222860318|gb|EEE97865.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
R AI +ILQ S +IPYLA+N+ DRFIS+ +P+ + L L CL +
Sbjct: 50 FRHEAISLILQAQYSCNCGPFIPYLAVNFMDRFISRMEIPQGKPWI---LRLVVVSCLSL 106
Query: 95 AWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + FS S+F G+ + +N MEL IL+ L+WR R++ +FV FF+++S
Sbjct: 107 AAKMENTDFSISNF-QGDEAGFIFDNKTINRMELLILDTLDWRMRSITPFSFVHFFISLS 165
Query: 154 SAK------GIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLL 197
K +K R II +AQ ++ KPS+IAA+AL+ K LL
Sbjct: 166 QLKDPALTQTLKDR-ATEIIFKAQNEIKLLKFKPSIIAASALLVASKELL 214
>gi|225447693|ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinifera]
Length = 294
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYA----YINEANFLRPRAIKVILQNSKSNKRNAYIP 57
D H+ A F E MP+ Y ++ R +AI ILQ S S + ++
Sbjct: 14 DLHSHA--VASLFQAENHHMPSIDYCGSLDSVDCDVSFRRQAISSILQMSSSF--DPFLS 69
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+NY DRF+S+ +P + L L A C+ +A K++ FS +DF +
Sbjct: 70 YLAINYLDRFLSRSEMPSEKPWI---LRLLAVSCVSLAAKMKKTEFSLADFQGEGGFIFD 126
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIEAQ 171
S+ + ME+ +L L+WR R+V +F+ FF+++ K +K R V II+++Q
Sbjct: 127 -SETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKLKDPPLLEALKAR-VIEIILKSQ 184
Query: 172 ADLSFASCKPSVIAAAALVHVC 193
++ KPS+IAA+ L++ C
Sbjct: 185 KEIKLLQFKPSIIAASTLLYAC 206
>gi|296081259|emb|CBI18003.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 14 FDVEEKSMPAAGYA----YINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F E MP+ Y ++ R +AI ILQ S S + ++ YLA+NY DRF+S
Sbjct: 24 FQAENHHMPSIDYCGSLDSVDCDVSFRRQAISSILQMSSS--FDPFLSYLAINYLDRFLS 81
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ +P + L L A C+ +A K++ FS +DF + S+ + ME+ +
Sbjct: 82 RSEMPSEKPWI---LRLLAVSCVSLAAKMKKTEFSLADFQGEGGFIFD-SETIMRMEILV 137
Query: 130 LNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIEAQADLSFASCKPSV 183
L L+WR R+V +F+ FF+++ K +K R V II+++Q ++ KPS+
Sbjct: 138 LGALKWRMRSVTPFSFISFFISLFKLKDPPLLEALKAR-VIEIILKSQKEIKLLQFKPSI 196
Query: 184 IAAAALVHVC 193
IAA+ L++ C
Sbjct: 197 IAASTLLYAC 206
>gi|147778292|emb|CAN65140.1| hypothetical protein VITISV_034614 [Vitis vinifera]
Length = 435
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
FD E M + + A LR AI +ILQ S + +I YLA+NY DRFISK +
Sbjct: 100 FDSESDHMVSQIFLRRFHAEPLRREAIALILQAQYSCNLDNFISYLAVNYVDRFISKKEV 159
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
PE + LV++ CL +A K++ FS+SDF + ++ MEL IL+ L
Sbjct: 160 PEEKPWILRLLVIS---CLSLAAKMKKIDFSYSDFQKDEGFIFD-AQRIHRMELLILSTL 215
Query: 134 EWRSRAVVAVNFVPFFLNI------SSAKGIK--------------------------RR 161
WR R++ +FV FF+++ + K +K R
Sbjct: 216 NWRMRSITPFSFVYFFISLFELKDPALTKALKDRATELIFKARDGKIGYRFFKLIFEEAR 275
Query: 162 HVNRIIIEAQADLSFASCKPSVIAAAALV 190
+ II+ A++ KPS+IAA+AL+
Sbjct: 276 FLRNIIVVYIAEIKLLEYKPSIIAASALL 304
>gi|356546684|ref|XP_003541753.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 272
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 39 AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKL 98
AI +ILQ S K + ++ YLA+NY RF+S +P+ LV++ CL +A K+
Sbjct: 49 AISLILQVQVSCKLDQFVAYLAINYLHRFMSCQEIPQGKPWFLRLLVIS---CLSLASKM 105
Query: 99 RDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK-- 156
++ + S D + S MEL IL L+WR R++ +F+ FF++++ K
Sbjct: 106 KNTTLSILDMQKEGCYFKAQSIQ--RMELLILGALKWRMRSITPFSFLHFFISLAEIKDQ 163
Query: 157 GIKRRHVNR---IIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRES 213
+K+ NR II AQ + F KPS IAA +L+ L + R S
Sbjct: 164 SLKQTLKNRASEIIFNAQNGIKFLEYKPSTIAATSLIFASHELFPQQYS------TLRAS 217
Query: 214 LIDSTYVDEDSLD-SFCTMLDHM 235
+ Y+DE++L F M D M
Sbjct: 218 ITACEYLDEETLSKCFDLMQDMM 240
>gi|356557648|ref|XP_003547127.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 272
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 39 AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKL 98
AI +ILQ S K + ++ YLA+NY RF+S +P+ L L CL +A K+
Sbjct: 49 AISLILQVQVSCKLDPFVAYLAINYLHRFMSSQEIPQ---GKPWFLRLVVISCLSLASKM 105
Query: 99 RDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS----- 153
++ + SF + S MEL IL L+WR R++ +F+ FF++++
Sbjct: 106 KNTTLSFLVIQKEGCYFKAQSIQ--RMELLILGALKWRMRSITPFSFLHFFISLAEIKDQ 163
Query: 154 SAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRES 213
S K + + II AQ D+ KPS +AA AL+ L + R S
Sbjct: 164 SLKQALKSRASEIIFNAQNDIKLLEYKPSTVAATALIFASHELFPQQYS------ILRAS 217
Query: 214 LIDSTYVDEDSLD-SFCTMLDHM 235
+ S Y+D ++L F M D M
Sbjct: 218 ITASEYLDGETLSKCFDLMQDMM 240
>gi|359359238|gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
Length = 324
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 31/284 (10%)
Query: 14 FDVEEKSMPAAGY-AYINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F +E MP+ Y + E +F R AI + + S + + YLA+NY DRF+S
Sbjct: 24 FLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVFR--VSCNFDPSLSYLAVNYLDRFLS 81
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL---PRNYSKHALNME 126
+P+ V L L A C+ +A K+++ F +D P+ K ME
Sbjct: 82 SQGIPQPKPWV---LKLLAVACVSLAAKMKEAEFYVTDIQGDGGFVFDPQTIQK----ME 134
Query: 127 LQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR-----IIIEAQADLSFASCKP 181
+ IL L WR R++ +F+ FF+++ K R + II +AQ D++ +P
Sbjct: 135 VLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACEIIFKAQNDINLLEFRP 194
Query: 182 SVIAAAALVHVC-KLLLRDENGERPDAKRC----RESLIDS-TYVDEDSLDSFCTMLDHM 235
S+ AA+AL++ C +L R C +E+L+ + E ++D + + D +
Sbjct: 195 SLTAASALLYACHELFPMQFLCFRKAISICSHVNKENLLQCYNAMQETAMDGYKSQFDMV 254
Query: 236 CCRKKMFQEINEEFLS----DVGGFHVLLNLDDAQQLWSLYDFK 275
++ FLS + G V+++ D + + W D K
Sbjct: 255 SSSDTPVNVLDRHFLSSESENTNGTVVMISSDGSNKTWPEKDIK 298
>gi|224146705|ref|XP_002326106.1| predicted protein [Populus trichocarpa]
gi|159025735|emb|CAN88868.1| D6-type cyclin [Populus trichocarpa]
gi|222862981|gb|EEF00488.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 14 FDVEEKSMPAAGY-AYINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F +E MP+ Y + E +F R AI +L+ S + + YLA+NY DRF+S
Sbjct: 24 FLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVLR--VSCNFDPSLSYLAVNYLDRFLS 81
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL---PRNYSKHALNME 126
+P+ V L +A C+ +A K+++ F +D P+ K ME
Sbjct: 82 SQGIPQPKPWVFKLLAVA---CVSLAAKMKEAEFYVTDIQGDGGFVFDPQTIQK----ME 134
Query: 127 LQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR-----IIIEAQADLSFASCKP 181
+ IL L WR R++ +F+ FF+++ K R + II +AQ D++ +P
Sbjct: 135 VLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACEIIFKAQNDINLLEFRP 194
Query: 182 SVIAAAALVHVCKLLLRDENGERPDAKRC-RESLIDSTYVDEDSL 225
S+ AA+AL++ C L P C R+++ +YV++++L
Sbjct: 195 SLTAASALLYACHELF-------PMQFLCFRKAISICSYVNKENL 232
>gi|255567453|ref|XP_002524706.1| cyclin d, putative [Ricinus communis]
gi|223536067|gb|EEF37725.1| cyclin d, putative [Ricinus communis]
Length = 305
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
R AI +ILQ + + YLA+NY DR +S+ +P+ + L L A CL +
Sbjct: 49 FRQEAISLILQAQYTCNFEPFFAYLAINYMDRCVSRQEIPQGKPWL---LRLLAISCLSL 105
Query: 95 AWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K++D F S+ + N+ ++ MEL IL L WR R++ +F+ FF+++
Sbjct: 106 AAKMKDTHFPLSNLQREESF--NFDMQTVSRMELLILGALNWRMRSITPFSFLHFFISLF 163
Query: 154 SAK------GIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
K +K R II +A ++ +PSVIAA+AL+
Sbjct: 164 ELKDPPLTQALKDR-ATEIIFKAHHEIKLLEFRPSVIAASALL 205
>gi|15236274|ref|NP_192236.1| cyclin D6-1 [Arabidopsis thaliana]
gi|75315709|sp|Q9ZR04.1|CCD61_ARATH RecName: Full=Putative cyclin-D6-1; AltName: Full=G1/S-specific
cyclin-D6-1; Short=CycD6;1
gi|4262155|gb|AAD14455.1| putative D-type cyclin [Arabidopsis thaliana]
gi|7270197|emb|CAB77812.1| putative D-type cyclin [Arabidopsis thaliana]
gi|332656900|gb|AEE82300.1| cyclin D6-1 [Arabidopsis thaliana]
Length = 302
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 30/195 (15%)
Query: 14 FDVEEKSMPAAGYAY-INEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F VE + MP++ Y + + + FL R +AI I Q S+ + + YLA+NY DRF+S
Sbjct: 32 FLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFD-DPSLTYLAVNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSD------FMAGNNLPRNYSKHAL 123
+P+ + L L + C+ ++ K+R S SD F + R
Sbjct: 91 SEDMPQSKPWI---LKLISLSCVSLSAKMRKPDMSVSDLPVEGEFFDAQMIER------- 140
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG---IKRRH-----VNRIIIEAQADLS 175
ME IL L+WR R+V +F+ FF+++ K + +H + + Q D+S
Sbjct: 141 -MENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDIS 199
Query: 176 FASCKPSVIAAAALV 190
F KPSVIA AAL+
Sbjct: 200 FLEFKPSVIAGAALL 214
>gi|363808000|ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycine max]
gi|255634925|gb|ACU17821.1| unknown [Glycine max]
Length = 316
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 2 DFHNVAPDFV-KYFDVEEKSMPAAGYAY-INEANF-LRPRAIKVILQNSKSNKRNAYIPY 58
+FH++ D V F +E +P Y + ++F + R V L + S + +PY
Sbjct: 11 NFHDLPCDAVPSLFLIESDHIPPPNYCQSLKASDFDISVRRDVVSLISQLSCTFDPVLPY 70
Query: 59 LALNYFDRFISKHTL--PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMA----GN 112
LA+NY DRF++ + P+ N L A C +A K+ +S +D G+
Sbjct: 71 LAINYLDRFLANQGILQPKPWANK-----LLAVSCFSLAAKMLKTEYSATDVQVLMNHGD 125
Query: 113 NLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV-----NRII 167
++ ME +L L+WR R++ +F+PFF+N+ K R V + II
Sbjct: 126 GGAIFETQTIQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPALRQVLKDRASEII 185
Query: 168 IEAQADLSFASCKPSVIAAAALVH 191
+++Q ++ KPS +AA+AL++
Sbjct: 186 LKSQREIKVLEFKPSTVAASALLY 209
>gi|357153552|ref|XP_003576488.1| PREDICTED: cyclin-D2-1-like [Brachypodium distachyon]
Length = 323
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ S YLA+NY DRF+S H LP+ G + L A CL +A
Sbjct: 85 RADSVAWILKVQVSYGFLPLTAYLAVNYMDRFLSLHRLPQEDGWA---MQLLAVTCLSLA 141
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + S D A + + L MEL IL L WR R+V F+ FF
Sbjct: 142 AKMEETLVPSLLDLQAESTRYIFEPQTILRMELLILTALNWRLRSVTPFTFIDFFACKVD 201
Query: 155 AKGIKRRHV----NRIIIEAQADLSFASCKPSVIAAAALV 190
+G R++ +II+ A D+ F PS +AAAA++
Sbjct: 202 PRGKHTRYLIARATQIILAALHDIKFLDHCPSTMAAAAVL 241
>gi|356543770|ref|XP_003540333.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 315
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 2 DFHNVAPDFV-KYFDVEEKSMPAAGYAY-INEANF-LRPRAIKVILQNSKSNKRNAYIPY 58
+FH++ D V F +E +P Y ++F + R V L + S + +PY
Sbjct: 11 NFHDLPCDAVPSLFLIESDHIPPPNYCQSFKASDFDISVRRDVVSLISQLSCTFDPVLPY 70
Query: 59 LALNYFDRFISKHTL--PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMA----GN 112
LA+NY DRF++ + P+ N L A C +A K+ +S +D G+
Sbjct: 71 LAINYLDRFLAHQGILQPKPWANK-----LLAISCFSLAAKMLKTEYSATDVQVLMNHGD 125
Query: 113 NLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV-----NRII 167
++ ME +L L+WR R++ +F+PFF+N+ K R V + II
Sbjct: 126 GGAIFEAQTIQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPALRQVLKDGASEII 185
Query: 168 IEAQADLSFASCKPSVIAAAALVH 191
+++Q ++ KPS +AA+AL++
Sbjct: 186 LKSQREIKVLEFKPSTVAASALLY 209
>gi|297809809|ref|XP_002872788.1| CYCD6_1 [Arabidopsis lyrata subsp. lyrata]
gi|297318625|gb|EFH49047.1| CYCD6_1 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 31/195 (15%)
Query: 14 FDVEEKSMPAAGYAY-INEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
F VE + MP++ Y + + + FL R AI I+Q S+ + + YLA+NY DRF+S
Sbjct: 33 FLVEFQHMPSSHYFHSLKSSAFLLSNRNHAISSIIQYSRKFD-DPSLTYLAVNYLDRFLS 91
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS------DFMAGNNLPRNYSKHAL 123
+P+ + L L + C+ ++ K+R S S +F + R
Sbjct: 92 SEDMPQSKPWI---LRLISLSCVSLSAKMRKPEMSVSHLPVEGEFFDAQMIER------- 141
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSAK--------GIKRRHVNRIIIEAQADLS 175
ME IL L+WR R+V +F+ FF+++ K +K + ++ + Q D+
Sbjct: 142 -MENVILGALKWRMRSVTPFSFLAFFISLFELKEDPLVLKHSLKSQAID-LTFNLQHDIR 199
Query: 176 FASCKPSVIAAAALV 190
F KPSVIA AAL+
Sbjct: 200 FLEFKPSVIAGAALL 214
>gi|356515222|ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 41/271 (15%)
Query: 3 FHNVAPDFVKY-FDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIP 57
F N+ D V Y F +E P+ ++ +A L R I +I Q S + + +
Sbjct: 9 FENLHSDAVSYLFLIESDHTPSQNHSQTLKARDLDISVRRELISLISQLSCA--LDPVLS 66
Query: 58 YLALNYFDRFISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNN 113
YLA+NY DRF++ + P VL L A C+ +A K+ + F+D A N
Sbjct: 67 YLAINYLDRFLANQGILQPKPWVLR-------LIAVSCISLAVKMMRTEYPFTDVQALLN 119
Query: 114 LPRN----YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV--NR-- 165
++ ME IL L+WR R++ +FV FF+ + K + V NR
Sbjct: 120 QSDGGIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIALMGLKDLPMGQVLKNRAS 179
Query: 166 -IIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDS 224
II ++Q ++ KPS+IAA+AL+ L + P + ++ DS+YV+++S
Sbjct: 180 EIIFKSQREIRLWGFKPSIIAASALLCASHELFP---FQYPSFLK---AISDSSYVNKES 233
Query: 225 LDSFCTMLDHMCCRKKMFQEINEEFLSDVGG 255
++ C + I EE+ S + G
Sbjct: 234 VEQ--------CYKVIQDIAIEEEYSSALNG 256
>gi|147900730|ref|NP_001087887.1| cyclin Dx [Xenopus laevis]
gi|51950089|gb|AAH82426.1| MGC83328 protein [Xenopus laevis]
Length = 290
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
+K ++EE+ +P+A Y Y + + ++R +L+ + K + LA+N DR
Sbjct: 28 LMKLLELEERYIPSASYFYCVQTHLQPYMRRMLTSWMLEVCEDQKCGEDVFPLAVNCLDR 87
Query: 67 FISKHTLPEVLGNVEDD-LVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNM 125
F+S L VE L L + CL +A KLR+ + ++ + + K L M
Sbjct: 88 FLS-------LVPVEKRRLQLLGSTCLFLASKLRETTPMTAESLCMYSDYCFTDKELLAM 140
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR----IIIEAQADLSFASCKP 181
EL +LN L+W AV F+P FL + KRR V + I D +F + P
Sbjct: 141 ELLVLNKLKWDIEAVTPREFLPHFLELLGLPTEKRRQVRKHSETFIALCTTDCTFIALPP 200
Query: 182 SV 183
S+
Sbjct: 201 SM 202
>gi|47208111|emb|CAF90703.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1282
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S ++ L L C+ +A KL++ ++ +
Sbjct: 1070 LAMNYMDRFLSAEP------TKKNRLQLLGAACMFLASKLKETIPLTANKLCIYTDNSVT 1123
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADL 174
L MEL +LN L+W +V ++F+ FL + +K + R+H + D+
Sbjct: 1124 PAQLLQMELLVLNRLKWDLASVTPLDFIDHFLRQLPGMRDSKLVLRKHAQTFVALCATDV 1183
Query: 175 SFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSL 225
F + PS++AA+++V + L GER +++ E L + D D L
Sbjct: 1184 KFIASPPSMVAASSMVAAVEGLQGRLPGERDLSQKMAEQLAQTIRCDPDCL 1234
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 14 FDVEEKSMPAAGYAYINE---ANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
E+K PA Y + A ++R +L+ + K + LA+NY DRF+S
Sbjct: 726 LRAEDKYQPAPNYFKCVQRDLAPYMRRVVATWMLEVCEEQKCEEEVFPLAMNYMDRFLSA 785
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
++ L L C+ +A KL++ ++ + L MEL +L
Sbjct: 786 EP------TKKNRLQLLGAACMFLASKLKETIPLTANKLCIYTDNSVTPAQLLQMELLVL 839
Query: 131 NGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKP 181
N L+W +V ++F+ FL + +K + R+H + D A+ +P
Sbjct: 840 NRLKWDLASVTPLDFIDHFLRHFPGMRDSKLVLRKHAQTFVALCATDQPEATEQP 894
>gi|357453607|ref|XP_003597084.1| Cyclin-D5-2 [Medicago truncatula]
gi|355486132|gb|AES67335.1| Cyclin-D5-2 [Medicago truncatula]
Length = 302
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 17/148 (11%)
Query: 55 YIPYLALNYFDRFISKHTL--PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMA-- 110
++ YLA+NY DRF++ + P+ N L A C +A K+ +S +D A
Sbjct: 68 FVTYLAINYLDRFLANQGILQPKPWANK-----LLAVTCFSLAVKMLKTEYSATDVQALM 122
Query: 111 --GNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI-----SSAKGIKRRHV 163
G+ ++ ME +L L+WR R++ +F+P+F N+ + K +K R
Sbjct: 123 NHGDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNLFMLDDITLKVLKDR-A 181
Query: 164 NRIIIEAQADLSFASCKPSVIAAAALVH 191
+ II+++Q D+ KPS++AA++L++
Sbjct: 182 SEIILKSQKDVKVMEFKPSIVAASSLLY 209
>gi|168008326|ref|XP_001756858.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692096|gb|EDQ78455.1| predicted protein [Physcomitrella patens subsp. patens]
gi|343960564|dbj|BAK64053.1| cyclin D;2 [Physcomitrella patens subsp. patens]
Length = 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S+H LPE + L L + C+ +A K+ + + +
Sbjct: 108 LAVNYMDRFLSRHHLPE---GKDWMLQLLSVSCISLAAKMEESEVPILLDLQVEQQEHIF 164
Query: 119 SKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR----HVNRIIIEAQAD 173
H + MEL +L+ LEWR V +++ +F + + R V+ II++A D
Sbjct: 165 EAHTIQRMELLVLSTLEWRMSVVTPFSYIDYFFHKLGISELLLRALLSRVSEIIMKAIED 224
Query: 174 LSFASCKPSVIAAAALV 190
+F PSV+AAA+L+
Sbjct: 225 TTFLQYLPSVVAAASLI 241
>gi|356540664|ref|XP_003538806.1| PREDICTED: cyclin-D3-2-like [Glycine max]
Length = 335
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 35 LRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCL 92
L PR +++I + S + + LA+NYFDRF++ L L A C+
Sbjct: 60 LSPRHHVVRLISKLSNFHGFSPLTTVLAVNYFDRFVATLRFQSELKPWMTQLTAVA--CV 117
Query: 93 IIAWKLRDQSFSF-SDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + SDF + +K MEL +L+ LEW+ V ++F FL
Sbjct: 118 SLAAKVEETRVPLLSDFQVEESKFLFEAKTIQRMELLVLSTLEWKMNPVTPISFFQHFL- 176
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGER 204
++ G+KR R R+++ AD S PS +AAA ++HV K + E
Sbjct: 177 --TSLGLKRHLHSESLRRCQRLLLSVIADSRVMSYLPSTVAAAIMIHVIKEI------EP 228
Query: 205 PDAKRCRESLIDSTYVDEDSLD-SFCTMLDHMCCRKKM 241
+A R L+ E+ +D + ML + C K +
Sbjct: 229 LNATEYRNQLLGLLKTSEEQVDECYKLMLRLLVCSKGI 266
>gi|255569637|ref|XP_002525784.1| conserved hypothetical protein [Ricinus communis]
gi|223534934|gb|EEF36620.1| conserved hypothetical protein [Ricinus communis]
Length = 282
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 43/191 (22%)
Query: 9 DFVKYFDVEEKSM---PAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
+ V Y + E +SM P A LR +I + S +K +A I YLA+N+FD
Sbjct: 22 ELVSYLNEESQSMDVDPCNNPA----VRILRANVAVLIAEISNHDKLDASITYLAMNFFD 77
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNM 125
RFIS+HTLP+ N+ I W ++ M
Sbjct: 78 RFISRHTLPKSRPNL-----------YIKNWAIKKV-----------------------M 103
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVI 184
L I L RS +V A+ FV FL +S + +V ++II++Q D++ KPSVI
Sbjct: 104 SL-IHKELSERSYSVNALCFVSNFLPLVSDVDESFKANVIKLIIQSQGDINLTQFKPSVI 162
Query: 185 AAAALVHVCKL 195
AA+A++ C +
Sbjct: 163 AASAILVACSV 173
>gi|2995130|emb|CAA58285.1| cyclin delta-1 [Arabidopsis thaliana]
Length = 335
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA+NY DRF+ LPE G + L A CL +A K+ + S DF
Sbjct: 104 YLAVNYMDRFLYARRLPETSGW---PMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYL 160
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQA 172
+K MEL +L+ L+WR R+V +F+ FF + G H II+
Sbjct: 161 FEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIK 220
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ SF PS IAAAA++ V
Sbjct: 221 EASFLEYWPSSIAAAAILCV 240
>gi|15223075|ref|NP_177178.1| cyclin-D1-1 [Arabidopsis thaliana]
gi|59802916|sp|P42751.3|CCD11_ARATH RecName: Full=Cyclin-D1-1; AltName: Full=Cyclin-delta-1;
Short=Cyclin-d1; AltName: Full=G1/S-specific
cyclin-D1-1; Short=CycD1;1
gi|2194121|gb|AAB61096.1| Strong similarity to Arabidopsis cyclin delta-1 (gb|ATCD1). EST
gb|ATTS4338 comes from this gene [Arabidopsis thaliana]
gi|26449478|dbj|BAC41865.1| unknown protein [Arabidopsis thaliana]
gi|28950911|gb|AAO63379.1| At1g70210 [Arabidopsis thaliana]
gi|332196913|gb|AEE35034.1| cyclin-D1-1 [Arabidopsis thaliana]
Length = 339
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA+NY DRF+ LPE G + L A CL +A K+ + S DF
Sbjct: 104 YLAVNYMDRFLYARRLPETSGW---PMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYL 160
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQA 172
+K MEL +L+ L+WR R+V +F+ FF + G H II+
Sbjct: 161 FEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIK 220
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ SF PS IAAAA++ V
Sbjct: 221 EASFLEYWPSSIAAAAILCV 240
>gi|242049156|ref|XP_002462322.1| hypothetical protein SORBIDRAFT_02g023800 [Sorghum bicolor]
gi|241925699|gb|EER98843.1| hypothetical protein SORBIDRAFT_02g023800 [Sorghum bicolor]
Length = 333
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCLIIAWKLRDQ 101
K + ++P YLA+NY DRF+S H LP+ E+D + L A CL +A K+ +
Sbjct: 92 KVQEYYGFLPLTAYLAVNYMDRFLSLHRLPQ-----EEDGWAMQLLAVTCLSLAAKMEET 146
Query: 102 SF-SFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK 159
S D ++ + MEL +L L WR R+V F+ FF G
Sbjct: 147 LVPSLLDLQVEGTSRYDFDPGTVGRMELIVLTALNWRLRSVTPFTFIDFFACKVDPGGRH 206
Query: 160 RRHV----NRIIIEAQADLSFASCKPSVIAAAALV 190
R + ++I+ A D+ F PS +AAAA++
Sbjct: 207 TRCLIARATQVILAAMHDIEFLDHCPSSMAAAAVL 241
>gi|297838811|ref|XP_002887287.1| cyclin delta-1 [Arabidopsis lyrata subsp. lyrata]
gi|297333128|gb|EFH63546.1| cyclin delta-1 [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ + YLA+NY DRF+ LPE G + L A CL +A
Sbjct: 86 REDSVAWILKVQEYYNFQPLTAYLAVNYMDRFLYARRLPETSGW---PMQLLAVACLSLA 142
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN--- 151
K+ + S DF +K MEL +L+ L+WR R+V +F+ FF
Sbjct: 143 AKMEEILVPSLFDFQVAGVKYIFEAKTIKRMELLVLSVLDWRLRSVTPFDFLSFFAYKID 202
Query: 152 -ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+ G H II+ + SF PS IAAAA++ V
Sbjct: 203 PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCV 244
>gi|449444582|ref|XP_004140053.1| PREDICTED: putative cyclin-D6-1-like [Cucumis sativus]
Length = 316
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 3 FHNVAPDFVKYFDVEEKSMPAAGYAYI---NEANF-LRPRAIKVILQNSKSNKRNAYIPY 58
H + D F E M + Y + + ++F +R I I Q ++ + ++ Y
Sbjct: 12 LHQLHSDDASLFLTESDHMLSPSYLHTLLTSPSDFAVRRDTIYFISQCCSNSNIDPHLSY 71
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL---P 115
LA+NY DRF S +P+ V L L A C+ +A K++ + SDF P
Sbjct: 72 LAVNYLDRFFSFQGMPQPKPWV---LRLLAVSCVSLAAKMKQIEHNLSDFQGSEGFIFDP 128
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIE 169
+ + ME+ IL L+WR R++ +F+PFF ++ + +K R II
Sbjct: 129 QTVHR----MEVLILGALKWRMRSITPFSFIPFFSSLFKLRDPPLLQALKGR-ATEIIFI 183
Query: 170 AQADLSFASCKPSVI 184
AQ + K SVI
Sbjct: 184 AQNGIELLEFKASVI 198
>gi|374349348|gb|AEZ35254.1| cyclin D-type [Persea americana]
Length = 334
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 33/198 (16%)
Query: 14 FDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
D E MP + Y + L R A+ IL+ + + YL++NY DRF+S
Sbjct: 38 LDSEPHHMPQSDYLHRFHDRSLDVASRQDAVNWILKVHEHYRFRPVTAYLSVNYLDRFLS 97
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSF--------SDFMAGNNLPRNYSKH 121
H+LP G L L + CL +A KL + FM N R +
Sbjct: 98 SHSLPRGYGW---PLQLLSVACLSVAVKLEETEVPLLLDLQLFEPQFMFEN---RTIGR- 150
Query: 122 ALNMELQILNGLEWRSRAVVAVNFVPFFL---------NISSAKGIKRRHVNRIIIEAQA 172
ME+ ++ L+WR R+V +FV +F N+SS + R V+ +I+
Sbjct: 151 ---MEVMVMASLKWRMRSVTPFDFVDYFAERIESFGARNVSSDRFFCR--VSELILSTHR 205
Query: 173 DLSFASCKPSVIAAAALV 190
+ F + S +AAAA++
Sbjct: 206 VIDFLGFRSSTMAAAAVL 223
>gi|115472725|ref|NP_001059961.1| Os07g0556000 [Oryza sativa Japonica Group]
gi|75289696|sp|Q69S43.1|CCD61_ORYSJ RecName: Full=Cyclin-D6-1; AltName: Full=G1/S-specific cyclin-D6-1;
Short=CycD6;1
gi|50508578|dbj|BAD30903.1| putative cyclin D1 [Oryza sativa Japonica Group]
gi|113611497|dbj|BAF21875.1| Os07g0556000 [Oryza sativa Japonica Group]
gi|215768497|dbj|BAH00726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637262|gb|EEE67394.1| hypothetical protein OsJ_24707 [Oryza sativa Japonica Group]
Length = 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLALNY DR++SK L N +LA +C + A R + S +D G
Sbjct: 78 VAYLALNYVDRYLSKRQL-ACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEFM 136
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK--------GIKRRHVNRII 167
+ +K ME +LN LEWR+R+V + F+ FFL+ + IK R V+ ++
Sbjct: 137 FDEAK-IQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVD-LL 194
Query: 168 IEAQADLSFASCKPSV 183
+ Q ++ A PSV
Sbjct: 195 LRVQPEVKMAEFSPSV 210
>gi|356544884|ref|XP_003540877.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 324
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 3 FHNVAPDFVKY-FDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIP 57
N+ D V Y F +E P+ ++ +A L R I +I Q S + + +
Sbjct: 9 LENLHSDDVSYLFLIESDHTPSQNHSQTLKARDLDISVRRELISLISQLSCA--LDPVLS 66
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+NY DRF++ +L L L A C+ + K+ + +D A N
Sbjct: 67 YLAINYLDRFLTNQG---ILQPKPWALRLVAVSCISLTVKMMGTEYPATDIQALLNQSDG 123
Query: 118 ----YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK-----GIKRRHVNRIII 168
++ ME IL L+WR R++ +FV FF+ + K + + + II
Sbjct: 124 GIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIALMGLKESPMGQVLKNRASEIIF 183
Query: 169 EAQADLSFASCKPSVIAAAALV 190
++Q ++ KPS+IAA+AL+
Sbjct: 184 KSQREIRLWGFKPSIIAASALL 205
>gi|218199831|gb|EEC82258.1| hypothetical protein OsI_26449 [Oryza sativa Indica Group]
Length = 266
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLALNY DR++SK L N +LA +C + A R + S +D G
Sbjct: 30 VAYLALNYVDRYLSKRQL-ACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEFM 88
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK--------GIKRRHVNRII 167
+ +K ME +LN LEWR+R+V + F+ FFL+ + IK R V+ ++
Sbjct: 89 FDEAK-IQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVD-LL 146
Query: 168 IEAQADLSFASCKPSV 183
+ Q ++ A PSV
Sbjct: 147 LRVQPEVKMAEFSPSV 162
>gi|297847460|ref|XP_002891611.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337453|gb|EFH67870.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 46/268 (17%)
Query: 13 YFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSN--KRNAYIPYLALNYFDRFISK 70
YF E + M Y +R A+ VI++ + K ++PYLA+NYFD ++S+
Sbjct: 17 YFAQEWEYMADGEYCSNRYKKRMRQEALDVIIETIRKGDEKVKPFVPYLAMNYFDCYLSR 76
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
N L++ R ++ ++ G + ++E I
Sbjct: 77 ------------------NGGLLLK---RSKN---GKYIQG--------REVHDVEKVIE 104
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK---RRHVNRIIIEAQADLSFASCKPSVIAAA 187
NGL+ R +++ + F+ +FL + R+ + II+E Q+D+ F+ KPS+IA +
Sbjct: 105 NGLKGRMKSITPMCFIGYFLKACEPQDEALEVRQSITHIILETQSDIRFSCYKPSIIAGS 164
Query: 188 ALVHVCKLLLRDENGERPDAKRCRESLIDST--YVDEDSLDSFCTMLDHMCCRKKMFQEI 245
A++ D + P+ + E ++ Y+D++ L + ++ +K + +I
Sbjct: 165 AVIA----FFSDRS---PEYSQIYEEKVERLLGYIDKNKLKNCLVLMKETYDKKNLRADI 217
Query: 246 NEEFLSDVGGFHVLLNLDDAQQLWSLYD 273
LS GG + L D Q W + D
Sbjct: 218 GMRKLSVQGGENGLHVSIDYQLQWKVSD 245
>gi|334188636|ref|NP_001190620.1| cyclin-D4-1 [Arabidopsis thaliana]
gi|332010668|gb|AED98051.1| cyclin-D4-1 [Arabidopsis thaliana]
Length = 318
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G + L L A CL +A K+ + D G+
Sbjct: 111 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVF 167
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS------AKGIKRRHVNRIIIEAQ 171
+K MEL +LN L+WR RA+ +++ +FL S + + R + ++I
Sbjct: 168 EAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSL-QVIASTT 226
Query: 172 ADLSFASCKPSVIAAAALVHV 192
+ F +PS +AAA + V
Sbjct: 227 KGIDFLEFRPSEVAAAVALSV 247
>gi|4586801|dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]
Length = 368
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R A+K IL+ + + + LA+NYFDRF+S L +D + L A CL
Sbjct: 88 RKEAVKWILKVNAHYGFSTFTAILAINYFDRFLSS------LHFQKDKPWMIQLVAVTCL 141
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q DF + +K MEL +L+ L+WR V ++FV +
Sbjct: 142 SLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFVD---H 198
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G+K + RI++ AD F S PSV+A A ++HV
Sbjct: 199 IIRRLGLKSHIHWEFLKQCERILLLVIADCRFLSYMPSVLATATMLHV 246
>gi|15238462|ref|NP_201345.1| cyclin-D4-1 [Arabidopsis thaliana]
gi|147636713|sp|Q8LGA1.2|CCD41_ARATH RecName: Full=Cyclin-D4-1; AltName: Full=G1/S-specific cyclin-D4-1;
Short=CycD4;1
gi|9759622|dbj|BAB11564.1| D-type cyclin [Arabidopsis thaliana]
gi|332010666|gb|AED98049.1| cyclin-D4-1 [Arabidopsis thaliana]
Length = 308
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G + L L A CL +A K+ + D G+
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVF 157
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS------AKGIKRRHVNRIIIEAQ 171
+K MEL +LN L+WR RA+ +++ +FL S + + R + ++I
Sbjct: 158 EAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSL-QVIASTT 216
Query: 172 ADLSFASCKPSVIAAAALVHV 192
+ F +PS +AAA + V
Sbjct: 217 KGIDFLEFRPSEVAAAVALSV 237
>gi|147636501|sp|Q0J233.2|CCD21_ORYSJ RecName: Full=Cyclin-D2-1; AltName: Full=G1/S-specific cyclin-D2-1;
Short=CycD2;1
Length = 308
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF- 103
K + N ++P YLA+NY DRF+S LPE G L +A CL +A K+ +
Sbjct: 91 KVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVA---CLSLAAKMEETLVP 147
Query: 104 SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV 163
S D + + ME IL L WR R+V F+ FF +H+
Sbjct: 148 SLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFF---------ACKHI 198
Query: 164 -NRIIIEAQADLSFASCKPSVIAAAALV 190
N ++ A +D+ F PS +AAAA++
Sbjct: 199 SNAMVQNANSDIQFLDHCPSSMAAAAVL 226
>gi|21536631|gb|AAM60963.1| D-type cyclin [Arabidopsis thaliana]
Length = 308
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G + L L A CL +A K+ + D G+
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVF 157
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS------AKGIKRRHVNRIIIEAQ 171
+K MEL +LN L+WR RA+ +++ +FL S + + R + ++I
Sbjct: 158 EAKSVQRMELLVLNRLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSL-QVIASTT 216
Query: 172 ADLSFASCKPSVIAAAALVHV 192
+ F +PS +AAA + V
Sbjct: 217 KGIDFLEFRPSEVAAAVALSV 237
>gi|410930780|ref|XP_003978776.1| PREDICTED: G1/S-specific cyclin-D1-like [Takifugu rubripes]
Length = 301
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 17 EEKSMPAAGYAYINE---ANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
E+K PA Y + A ++R +L+ + K + LA+NY DRF+S
Sbjct: 37 EDKYQPAPNYFKCVQRELAPYMRRIVATWMLEVCEEQKCEEEVFPLAMNYMDRFLS---- 92
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
V ++ L L C+ +A KL++ ++ + L MEL +LN L
Sbjct: 93 --VEPTKKNHLQLLGATCMFLASKLKETIPLTANKLCIYTDNSITPAQLLQMELLVLNKL 150
Query: 134 EWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL 189
+W +V A++F+ FL + K + R+H + D+ F + PS++AA+++
Sbjct: 151 KWDLASVTALDFIDHFLRQLPGMRECKLVLRKHAQTFVALCATDVKFIASPPSMVAASSM 210
Query: 190 VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSL 225
V L G +++ E L + D D L
Sbjct: 211 VAAVGGLQSRLAGGCNMSQKMTEQLAQTIRCDPDCL 246
>gi|297797571|ref|XP_002866670.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312505|gb|EFH42929.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 31 EANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANC 90
+ N R A+ I + K ++ L++NY DRF+S H LP G + L L A
Sbjct: 73 DLNIGRREALNWIWKACKEHQFGPLCFCLSMNYLDRFLSVHDLPSGKGWI---LQLLAVA 129
Query: 91 CLIIAWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
CL +A K+ + D G+ +K MEL +LN L+WR RA+ +++ +F
Sbjct: 130 CLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSIQRMELLVLNRLKWRLRAITPCSYIRYF 189
Query: 150 L------NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
L + + + R + ++I + F +PS +AAA + V
Sbjct: 190 LRKMNKCDQEPSNTLISRSL-QVIASTTKGIDFMEFRPSEVAAAVALSV 237
>gi|226508910|ref|NP_001149823.1| cyclin delta-2 [Zea mays]
gi|195634883|gb|ACG36910.1| cyclin delta-2 [Zea mays]
Length = 322
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDD--LVLAANCCLIIAWKLRDQS 102
K + ++P YLA+NY DRF+S H LP+ ED + L A CL +A K+ +
Sbjct: 84 KVQEYYGFLPLTAYLAVNYMDRFLSLHRLPQ-----EDGWAMQLLAVTCLSLAAKMEETL 138
Query: 103 F-SFSDF-MAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK 159
S D + G + + + MEL +L L WR R+V FV FF G
Sbjct: 139 VPSLLDLQVEGTSRYDCFEPGTVGRMELLVLMALNWRLRSVTPFTFVDFFACKVDPGGRH 198
Query: 160 RRHV----NRIIIEAQADLSFASCKPSVIAAAALV 190
R + ++I+ A D+ F PS +AAAA++
Sbjct: 199 TRCLIARATQVILAAMHDVEFLDHCPSSMAAAAVL 233
>gi|414885280|tpg|DAA61294.1| TPA: cyclin delta-2 [Zea mays]
Length = 325
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDD--LVLAANCCLIIAWKLRDQS 102
K + ++P YLA+NY DRF+S H LP+ ED + L A CL +A K+ +
Sbjct: 85 KVQEYYGFLPLTAYLAVNYMDRFLSLHRLPQ-----EDGWAMQLLAVTCLSLAAKMEETL 139
Query: 103 F-SFSDF-MAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK 159
S D + G + + + MEL +L L WR R+V FV FF G
Sbjct: 140 VPSLLDLQVEGTSRYDCFEPGTVGQMELLVLMALNWRLRSVTPFTFVDFFACKVDPGGRH 199
Query: 160 RRHV----NRIIIEAQADLSFASCKPSVIAAAALV 190
R + ++I+ A D+ F PS +AAAA++
Sbjct: 200 TRCLIARATQVILAAMHDVEFLDHCPSSMAAAAVL 234
>gi|6448480|emb|CAB61221.1| cyclin D1 [Antirrhinum majus]
Length = 330
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDF-MAGNNL- 114
YLA++YFDRF++ H LP++ G L +A CL +A K+ + S D + G N
Sbjct: 96 YLAVSYFDRFLNAHHLPKLNGWPMQLLSVA---CLSLAAKMEESLVPSLLDLQVEGANFI 152
Query: 115 --PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF-LNI---SSAKGIKRRHVNRIII 168
PRN + MEL +L L+WR R++ ++ FF L I + G II+
Sbjct: 153 FEPRNIQR----MELLVLRVLDWRLRSISPFCYLSFFALKIDPTGTYTGFLTSRAKEIIL 208
Query: 169 EAQADLSFASCKPSVIAAAALV 190
+ S +PS IAAA ++
Sbjct: 209 STVQETSLIEYRPSCIAAATML 230
>gi|326529977|dbj|BAK08268.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDD--LVLAANCCLIIAWKLRDQSF-SFSDFMAGNNL 114
YLA+NY DRF+S H LP+ ED + L A CL +A K+ + S D +
Sbjct: 110 YLAVNYMDRFLSLHRLPQ-----EDGWAMQLLAVTCLSLAAKMEETLVPSLLDLQIESTR 164
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEA 170
+ L MEL +L L WR R+V F+ FF +G R++ ++I+ A
Sbjct: 165 YIFEPRTILRMELLVLTALNWRLRSVTPFTFIDFFACKVDPRGRHMRYLIARATQMILAA 224
Query: 171 QADLSFASCKPS 182
D+ F PS
Sbjct: 225 IHDIEFLDHCPS 236
>gi|224028573|gb|ACN33362.1| unknown [Zea mays]
gi|224029671|gb|ACN33911.1| unknown [Zea mays]
gi|414885279|tpg|DAA61293.1| TPA: hypothetical protein ZEAMMB73_119429 [Zea mays]
Length = 324
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF- 103
K + ++P YLA+NY DRF+S H LPE ++ L A CL +A K+ +
Sbjct: 85 KVQEYYGFLPLTAYLAVNYMDRFLSLHRLPEDGWAMQ----LLAVTCLSLAAKMEETLVP 140
Query: 104 SFSDF-MAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR 161
S D + G + + + MEL +L L WR R+V FV FF G R
Sbjct: 141 SLLDLQVEGTSRYDCFEPGTVGQMELLVLMALNWRLRSVTPFTFVDFFACKVDPGGRHTR 200
Query: 162 HV----NRIIIEAQADLSFASCKPSVIAAAALV 190
+ ++I+ A D+ F PS +AAAA++
Sbjct: 201 CLIARATQVILAAMHDVEFLDHCPSSMAAAAVL 233
>gi|339830706|gb|AEK20778.1| cyclin dependent kinase regulator [Musa acuminata AAA Group]
Length = 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP+ + L +A CL +A K+ + S D G
Sbjct: 114 YLSVNYLDRFLSSYDLPQGKAWMTQLLSVA---CLSLAAKMEETEVPLSLDLQVGEAKYI 170
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEAQA 172
+ MEL +++ L+WR +AV +F+ FFL+ + G + +I+
Sbjct: 171 FEGRTIQRMELLVMSTLKWRMQAVTPFSFIDFFLHKFNGCGAPSKLSLSRSAELILSTIR 230
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ F + +PSVI+AA + V
Sbjct: 231 GIDFLAFRPSVISAAIALLV 250
>gi|255569641|ref|XP_002525786.1| cyclin d, putative [Ricinus communis]
gi|223534936|gb|EEF36622.1| cyclin d, putative [Ricinus communis]
Length = 334
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSFA 177
Y L +E+ I+ L WR R++ + FV +F ++ + IK + II+++Q D+ F
Sbjct: 76 YGDDILKVEILIVRALNWRLRSITPLCFVQYFWSLVAHPAIKS-NAKEIIVQSQGDIRFT 134
Query: 178 SCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTY-VDEDSLDSFCTMLDHMC 236
PSVIAA+A++ + CR+ LI +D+ L+ M+ M
Sbjct: 135 QYNPSVIAASAVL-----------VSYYNEPACRQKLIGGNIKLDQRQLEDCTKMMTDM- 182
Query: 237 CRKKMFQEINEEFL----SDVGG 255
C++KM + +F S GG
Sbjct: 183 CKEKMIPFVERKFYLGECSKAGG 205
>gi|224071313|ref|XP_002303399.1| predicted protein [Populus trichocarpa]
gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus trichocarpa]
gi|222840831|gb|EEE78378.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N F R AI+ IL + YL++ YFDRF+SK ++ E G + +L+
Sbjct: 79 NWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE--GKLWAIRLLSV- 135
Query: 90 CCLIIAWKLRDQS------FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAV 143
CL +A K+ ++ F D+ GN + + MEL +LN LEWR ++
Sbjct: 136 ACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQ-------RMELLVLNTLEWRMNSITPF 188
Query: 144 NFVPFFLNISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
++ +F++ + + + V+R +I+ ++ +PS+I
Sbjct: 189 AYLHYFIHKTCGESTPKETVSRAVELIVAMIKEIDLLDHRPSII 232
>gi|356552951|ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 355
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP+ + + L A CL +A K+ + FS D G +
Sbjct: 118 YLSINYLDRFLSAYELPK---HRAWTMQLLAVGCLSLAAKMEETDVPFSLDLQVGESKYI 174
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQA 172
+K MEL +L+ L WR +A+ +F+ FL + S G ++I+
Sbjct: 175 FEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVR 234
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ F +PS IAAA + V
Sbjct: 235 GIDFLEFRPSEIAAAVAISV 254
>gi|255642346|gb|ACU21437.1| unknown [Glycine max]
Length = 352
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+ + LP+ LV+A CL +A KL + S D G +
Sbjct: 115 YLSINYLDRFLFAYELPKGRVWTMQLLVVA---CLSLAAKLDETEVPLSLDLQVGESKFL 171
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQA 172
+K MEL +L+ L+WR +A+ F+ +FL I+ + R + R +I
Sbjct: 172 FEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTAR 231
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ F KPS IAAA ++V
Sbjct: 232 GIDFLEFKPSEIAAAVAMYV 251
>gi|356501290|ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 339
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLAL 61
D N P F + +S+ A+ R ++ IL+ YL++
Sbjct: 56 DERNFVPGFEYLNRFQSRSLDASA----------REESVAWILKVQAYYAFQPLTAYLSV 105
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSK 120
NY DRF++ LP+ G L L + CL +A K+ + S D K
Sbjct: 106 NYLDRFLNSRQLPQTNGW---PLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPK 162
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSA-KGIKRRHVNRIIIEAQADLSF 176
MEL +L L+WR R+V +F+ FF L+ S G +II+ + SF
Sbjct: 163 TIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASF 222
Query: 177 ASCKPSVIAAAALVH 191
+ PS IAAA+++H
Sbjct: 223 LAYWPSCIAAASILH 237
>gi|449531372|ref|XP_004172660.1| PREDICTED: putative cyclin-D6-1-like [Cucumis sativus]
Length = 230
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 4 HNVAPDFVKYFDVEEKSMPAAGYAYI---NEANF-LRPRAIKVILQNSKSNKRNAYIPYL 59
H + D F E M + Y + + ++F +R I I Q ++ + ++ YL
Sbjct: 13 HQLHSDDASLFLTESDHMLSPSYLHTLLTSPSDFAVRRDTIYFISQCCSNSNIDPHLSYL 72
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL---PR 116
A+NY DRF S +P+ V L L A C+ +A K++ + DF P+
Sbjct: 73 AVNYLDRFFSFQGMPQPKPWV---LRLLAVSCVSLAAKMKQIEHNLFDFQGSEGFIFDPQ 129
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIEA 170
+ ME+ IL L+WR R++ +F+PFF ++ + +K R II A
Sbjct: 130 TVHR----MEVLILGALKWRMRSITPFSFIPFFSSLFKLRDPPLLQALKGR-ATEIIFIA 184
Query: 171 QADLSFASCKPSVI 184
Q + K SVI
Sbjct: 185 QNGIELLEFKASVI 198
>gi|4688615|emb|CAB41347.1| D-type cyclin [Arabidopsis thaliana]
Length = 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G + L L A CL +A K+ + D G+
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVF 157
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
+K MEL +LN L+WR RA+ +++ +FL
Sbjct: 158 EAKSVQRMELLVLNKLKWRLRAITPCSYIRYFL 190
>gi|226508156|ref|NP_001149910.1| cyclin delta-2 [Zea mays]
gi|195635395|gb|ACG37166.1| cyclin delta-2 [Zea mays]
Length = 355
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 13 YFDVEEKSMPAAGYA-YINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI 68
+ + E MP YA + A +R AI I + LA+NY DRF+
Sbjct: 58 FLETEAAHMPREDYAERLRGAGMDLRVRTDAIDWIWKVHTCYGFGPLTACLAVNYLDRFL 117
Query: 69 SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMEL 127
S + LPE + L +A CL +A K+ + S D AG+ +K MEL
Sbjct: 118 SLYQLPEGKAWMTQLLSVA---CLSLAAKMEETYVPSSLDLQAGDARYVFEAKTIQRMEL 174
Query: 128 QILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+L+ L+WR +AV +++V +FL+ + RR V R
Sbjct: 175 LVLSTLKWRMQAVTPLSYVDYFLHRLRGGAAPSRRAVLR 213
>gi|147843830|emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]
Length = 419
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A++ +L+ + +A LA+NYFDRF+ +V G LAA CL +A
Sbjct: 98 RSEAVEWMLRVNAHYSFSALTAVLAVNYFDRFLFS---CDVQGEKPWMTQLAAVACLSLA 154
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D + +K ME+ +L+ L W+ V ++F+ + I+
Sbjct: 155 AKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMVLSTLRWKMNPVTPLSFLDY---ITR 211
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K + R+++ +D F PSVIA A ++HV
Sbjct: 212 RLGLKNHLCWEFLKRCERVLLSVLSDCRFGCYLPSVIATAIMLHV 256
>gi|226502939|ref|NP_001152238.1| cyclin delta-2 [Zea mays]
gi|195654177|gb|ACG46556.1| cyclin delta-2 [Zea mays]
Length = 338
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 17 EEKSMPAAGYAYINEAN----FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
E + MP A Y + +R AI I + YLA+NY DRF+S +
Sbjct: 69 EREHMPRADYGQRLRGDGVDLCVRQEAIDCIWKVYTYYNFRPLTAYLAVNYLDRFLSLYK 128
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILN 131
LPE G + L +A C+ +A K+ + + D G+ +K MEL +L
Sbjct: 129 LPEGKGWMTQLLSVA---CVSLAAKMEETAVPQCLDLQVGDARFVFEAKTIQRMELLVLT 185
Query: 132 GLEWRSRAVVAVNFVPFFLN 151
L WR +AV ++V +FLN
Sbjct: 186 TLNWRMQAVTPFSYVDYFLN 205
>gi|359359236|gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
Length = 337
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N F R AI+ IL + YL++ YFDRF+SK ++ E G + +L+
Sbjct: 79 NWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE--GKLWAIRLLSV- 135
Query: 90 CCLIIAWKLRDQS------FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAV 143
CL +A K+ ++ F D+ GN + + ME +LN LEWR ++
Sbjct: 136 ACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQ-------RMEFLVLNTLEWRMNSITPF 188
Query: 144 NFVPFFLNISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
++ +F++ + + + V+R +I+ ++ +PS+I
Sbjct: 189 AYLHYFIHKTCGESTPKETVSRAVELIVAMIKEIDLLDHRPSII 232
>gi|356495490|ref|XP_003516610.1| PREDICTED: cyclin-D3-2-like [Glycine max]
Length = 334
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NYFDRF++ TL LAA C+ +A K+ + DF G +
Sbjct: 84 LAVNYFDRFVT--TLRFQSEQKPWMTHLAALACVSLAAKVEETRVPLLFDFQVGESKFLF 141
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR-------HVNRIIIEA 170
+K MEL +L+ LEW+ V ++F FL + G+KR R+++
Sbjct: 142 EAKTIQKMELLVLSTLEWKMNPVTPISFFQHFL---ARLGLKRHLHSEFLCRCQRLLLSV 198
Query: 171 QADLSFASCKPSVIAAAALVHVCK 194
AD S PS +AAA ++H+ K
Sbjct: 199 IADSRVMSYLPSTLAAAIMIHIIK 222
>gi|357158843|ref|XP_003578259.1| PREDICTED: cyclin-D4-1-like [Brachypodium distachyon]
Length = 346
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 12 KYFDVEEKSMPAAGYAYINEAN----FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
++ + E + MP YA A +R AI I + LALNY DRF
Sbjct: 60 RWVETEAEHMPREDYAQRLRAGGVDLLVRTDAIDWIWKVHTYYSFGPVTACLALNYLDRF 119
Query: 68 ISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALN-- 124
+S + LPE G +LA C L +A K+ + S S D G+ Y A+
Sbjct: 120 LSLYQLPE--GKTWMTQLLAVAC-LSVAAKMEETSVPQSLDLQVGDA---QYVFEAMTIQ 173
Query: 125 -MELQILNGLEWRSRAVVAVNFVPFFLN 151
MEL +L+ L+WR +AV +++ +FL+
Sbjct: 174 RMELLVLSTLKWRMQAVTPFSYIDYFLH 201
>gi|414885823|tpg|DAA61837.1| TPA: cyclin delta-2 [Zea mays]
Length = 355
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE + L +A CL +A K+ + S D AG+
Sbjct: 108 LAVNYLDRFLSLYQLPEGKAWMTQLLSVA---CLSLAAKMEETYVPSSLDLQAGDARYVF 164
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++V +FL+ + RR V R
Sbjct: 165 EAKTIQRMELLVLSTLKWRMQAVTPLSYVDYFLHRLRGGAAPSRRAVLR 213
>gi|356498831|ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 357
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP+ + + L A CL +A K+ + S D G +
Sbjct: 118 YLSINYLDRFLSAYELPK---HRTWTMQLLAVGCLSLAAKMEETDAPMSLDLQVGESKYI 174
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQA 172
+K MEL +L+ L WR +A+ +F+ FL + S G ++I+
Sbjct: 175 FEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVR 234
Query: 173 DLSFASCKPSVIAAAALVHV 192
+ F +PS IAAA + V
Sbjct: 235 GIDFLEFRPSEIAAAVAISV 254
>gi|334188634|ref|NP_001190619.1| cyclin-D4-1 [Arabidopsis thaliana]
gi|332010667|gb|AED98050.1| cyclin-D4-1 [Arabidopsis thaliana]
Length = 242
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G + L L A CL +A K+ + D G+
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVF 157
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
+K MEL +LN L+WR RA+ +++ +FL
Sbjct: 158 EAKSVQRMELLVLNKLKWRLRAITPCSYIRYFL 190
>gi|49387642|dbj|BAD25836.1| putative cyclin D1 [Oryza sativa Japonica Group]
Length = 320
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLP--EVLGNVEDD----LVLAANCCLIIAWKL 98
K + N ++P YLA+NY DRF+S LP + ++++ + L A CL +A K+
Sbjct: 91 KVQEYNGFLPLTAYLAVNYMDRFLSLRHLPVFVLFPSMQEGQGWAMQLLAVACLSLAAKM 150
Query: 99 RDQSF-SFSDFMAGNNLPRNYS---KHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
+ S D A Y + ME IL L WR R+V F+ FF
Sbjct: 151 EETLVPSLLDLQASTVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFF----- 205
Query: 155 AKGIKRRHV-NRIIIEAQADLSFASCKPSVIAAAALV 190
+H+ N ++ A +D+ F PS +AAAA++
Sbjct: 206 ----ACKHISNAMVQNANSDIQFLDHCPSSMAAAAVL 238
>gi|225458713|ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera]
gi|302142269|emb|CBI19472.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A++ +L+ + +A LA+NYFDRF+ +V G LAA CL +A
Sbjct: 98 RSEAVEWMLRVNAHYSFSALTAVLAVNYFDRFLFS---CDVQGEKPWMTQLAAVACLSLA 154
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D + +K ME+ +L+ L W+ V ++F+ + I+
Sbjct: 155 AKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMVLSTLRWKMNPVTPLSFLDY---ITR 211
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K + R+++ +D F PSVIA A ++HV
Sbjct: 212 RLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVIATAIMLHV 256
>gi|348523441|ref|XP_003449232.1| PREDICTED: G1/S-specific cyclin-D1-like [Oreochromis niloticus]
Length = 293
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 16 VEEKSMPAAGYAYINE---ANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
VE+ +PA Y + + ++R +L+ + K + LA+NY DR +S
Sbjct: 36 VEDMYLPAPNYFKCVQREISPYMRRIVAAWMLEVCEEQKCEEEVFPLAMNYMDRILS--- 92
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
V ++ L L C+ +A KL++ ++ + L MEL +LN
Sbjct: 93 ---VEPTKKNHLQLLGAACMFLASKLKETIPLTAEKLCIYTDNSVTPSQLLQMELLVLNK 149
Query: 133 LEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W + ++F+ FL+ K I R+H + D+ F + PS++AA +
Sbjct: 150 LKWDLASPTPLDFIDHFLSQLPVNKENKSILRKHAQTFVALCATDVKFIASPPSMVAAGS 209
Query: 189 LVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSL 225
+V + L G +++ E L + D D L
Sbjct: 210 MVAAVEGLQMRMVGNAMMSQKLTEQLAQTIKSDPDCL 246
>gi|351726748|ref|NP_001237137.1| cyclin d2 [Glycine max]
gi|42362309|gb|AAS13370.1| cyclin d2 [Glycine max]
Length = 361
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+ + LP+ G V + L A C+ +A KL + S D G +
Sbjct: 115 YLSINYLDRFLFAYELPK--GRVWT-MQLLAVACVSLAAKLDETEVPLSLDLQVGESKFL 171
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQA 172
+K MEL +L+ L+WR +A+ F+ +FL I+ + R + R +I
Sbjct: 172 FEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTAR 231
Query: 173 DLSFASCKPSVIAAAA 188
+ F KPS IAAA
Sbjct: 232 GIDFLEFKPSEIAAAV 247
>gi|344264313|ref|XP_003404237.1| PREDICTED: G1/S-specific cyclin-D3-like [Loxodonta africana]
Length = 291
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 16 VEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKH 71
+EE+ +P Y + N ++P K++ L+ + + LA+NY DRF+S
Sbjct: 34 MEERYLPCVSY-FQCVQNEIKPHMRKMLAYWMLEVCEEQHCEEDVFLLAMNYVDRFLS-- 90
Query: 72 TLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHA------LN 124
+ + L L + C+++A KLRD + + YS HA L+
Sbjct: 91 ----CVPTRKSQLQLLGSVCMLLASKLRDSKPLTIEKLCI-------YSDHAVSHRQMLD 139
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCK 180
EL +L L+W AV+A +F+ L+ S + R+H + D +FA
Sbjct: 140 WELLVLGRLKWDLAAVIAHDFLVLILHRLSLPSDRLALVRKHAQTFLALCATDYAFAMYP 199
Query: 181 PSVIAAAAL 189
PS+IA ++
Sbjct: 200 PSMIATGSV 208
>gi|356574327|ref|XP_003555300.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 324
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 39 AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKL 98
A+ IL+ + + +L++NY DRF+S+ +LP+ G L+ A CL +A K+
Sbjct: 76 AVNWILKVHAFYEFSPVTAFLSVNYLDRFLSRCSLPQESGGWAFQLLSVA--CLSLAAKM 133
Query: 99 RDQSFSF-SDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVP-FFLNISSAK 156
+ F D K MEL +++ L+WR R+V +++ FF + S+
Sbjct: 134 EESHVPFLLDLQLFQPKFVFEPKTVQRMELWVMSNLKWRLRSVTPFDYLHYFFTKLPSSS 193
Query: 157 GIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERP---------DA 207
+ +I+ ++F PS +AAAA+ C NG+ P +
Sbjct: 194 SQSITTASNLILSTTRVINFLGFAPSTVAAAAV--QCS-----ANGQLPLSFHDRLNSEM 246
Query: 208 KRCRESLIDSTYVD 221
RC L++ VD
Sbjct: 247 VRCCHQLMEEYVVD 260
>gi|1705782|sp|P50755.1|CCND1_XENLA RecName: Full=G1/S-specific cyclin-D1
gi|897819|emb|CAA61664.1| cyclin D1 [Xenopus laevis]
Length = 291
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE S P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 33 EETSCPSMSYFKCVQKEIL-PNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEP 91
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
L + L L C+ +A K+++ ++ + L MEL++LN
Sbjct: 92 LRKSW------LQLLGATCMFLASKMKETIPLTAEKLCIYTDNSIRPDELLIMELRVLNK 145
Query: 133 LEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W +V +F+ FLN K I R+H + D++F S PS+IAA +
Sbjct: 146 LKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDVNFISNPPSMIAAGS 205
Query: 189 L 189
+
Sbjct: 206 V 206
>gi|30683167|ref|NP_196606.3| cyclin-D4-2 [Arabidopsis thaliana]
gi|147636776|sp|Q0WQN9.2|CCD42_ARATH RecName: Full=Cyclin-D4-2; AltName: Full=G1/S-specific cyclin-D4-2;
Short=CycD4;2
gi|46931234|gb|AAT06421.1| At5g10440 [Arabidopsis thaliana]
gi|48958515|gb|AAT47810.1| At5g10440 [Arabidopsis thaliana]
gi|332004157|gb|AED91540.1| cyclin-D4-2 [Arabidopsis thaliana]
Length = 298
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G +LA CL +A K+ + + G +
Sbjct: 92 LAMNYLDRFLSVHDLPS--GKAWTVQLLAV-ACLSLAAKIEETNVPELMQLQVGAPMFVF 148
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR----RHVNR---IIIEA 170
+K MEL +LN L WR RAV ++V +FL S G + R V R +I
Sbjct: 149 EAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFL--SKINGYDQEPHSRLVTRSLQVIAST 206
Query: 171 QADLSFASCKPSVIAAAALVHV 192
+ F + S IAAA + V
Sbjct: 207 TKGIDFLEFRASEIAAAVALSV 228
>gi|297811149|ref|XP_002873458.1| CYCD4_2 [Arabidopsis lyrata subsp. lyrata]
gi|297319295|gb|EFH49717.1| CYCD4_2 [Arabidopsis lyrata subsp. lyrata]
Length = 296
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G +LA CL +A K+ + + G+ L
Sbjct: 92 LAMNYLDRFLSVHDLPN--GKAWTVQLLAV-ACLSLAAKIEETNVPELIHLQVGDPLFVF 148
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR----RHVNR---IIIEA 170
+K MEL +LN L WR RAV ++V +FL S G + R ++R +I
Sbjct: 149 EAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFL--SKINGYDQEPHSRLISRSLQVIAST 206
Query: 171 QADLSFASCKPSVIAAAALVHV 192
+ F + S IAAA + V
Sbjct: 207 TKGIDFLEFRASEIAAAVALSV 228
>gi|70568824|dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]
Length = 372
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 24/225 (10%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R AI +L+ NA LA+NY+DRFI+ + + LAA CL +
Sbjct: 96 MRNEAINWMLKVIAHYGFNALTAVLAVNYYDRFITSVCFQKDKPWMSQ---LAAVACLSV 152
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF----F 149
A K+ + Q D + +K MEL +L+ L+WR V ++F F
Sbjct: 153 AAKVEETQVPLLLDLQVEESKYLFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIARRF 212
Query: 150 LNISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKR 209
+ + + R +I+ D PSVIA+AA+++ + E PDA
Sbjct: 213 EFVKNLHSVFLRRCESLILSIITDCRLVKYFPSVIASAAMIYAIR------EFETPDALE 266
Query: 210 CRESLIDSTYVDEDSLDSFCTML---------DHMCCRKKMFQEI 245
+ L+ +D +D C L H C K+ ++ I
Sbjct: 267 YEDQLLSVLRTSKDKVDD-CRKLIVDAMYGGFSHKPCYKRKYESI 310
>gi|148237510|ref|NP_001080245.1| G1/S-specific cyclin-D1 [Xenopus laevis]
gi|27371142|gb|AAH41525.1| Ccnd1-prov protein [Xenopus laevis]
Length = 291
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE S P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 33 EETSCPSMSYFKCVQKEIL-PNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEP 91
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
L + L L C+ +A K+++ ++ + L MEL++LN
Sbjct: 92 LRKSW------LQLLGATCMFLASKMKETIPLTAEKLCIYTDNSIRPDELLIMELRVLNK 145
Query: 133 LEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W +V +F+ FLN K I R+H + D++F S PS+IAA +
Sbjct: 146 LKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDVNFISNPPSMIAAGS 205
Query: 189 L 189
+
Sbjct: 206 V 206
>gi|357516735|ref|XP_003628656.1| Cyclin-D1-1 [Medicago truncatula]
gi|355522678|gb|AET03132.1| Cyclin-D1-1 [Medicago truncatula]
Length = 355
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ + YL++NY DRF+ LPE G L L + CL +A
Sbjct: 94 REEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGW---PLQLLSVACLSLA 150
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + S DF + L MEL +L L+WR R++ ++F+ FF
Sbjct: 151 AKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFFACKLD 210
Query: 155 AKGIKRRHV----NRIIIEAQADLSFASCKPS 182
+ G + II+ D SF + +PS
Sbjct: 211 STGTFTHFIISRATEIILSNIQDASFLTYRPS 242
>gi|290578972|gb|ADD51364.1| D3-type cyclin [Malus x domestica]
Length = 376
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV--LAANCCLI 93
R A+ +L+ + +A LA +YFDRF+S L VE + LAA C+
Sbjct: 107 RREAVDWMLRVASHYSFSALTAVLAADYFDRFLSSLQL-----QVEKPWMTQLAAVACIS 161
Query: 94 IAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI 152
+A K+ + Q DF ++ ++ ME+ +L+ L+WR V ++F+ + I
Sbjct: 162 LAAKVEETQVPLLLDFQVEDSKYVFEARTIKRMEILVLSTLQWRMNPVTPISFIDY---I 218
Query: 153 SSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERP 205
+ G+K + I++ +D F PSV+A A ++HV K N E
Sbjct: 219 TRRLGLKNHLCWEVLKRCELILLNLISDSRFMYFLPSVVATATMLHVVK------NMEPC 272
Query: 206 DAKRCRESLIDSTYVDEDSLDSFCTMLDHM 235
+ L+ +++D +D C ++ +
Sbjct: 273 LLIEYQTQLLGILGINKDKVDDCCKLISEL 302
>gi|414885825|tpg|DAA61839.1| TPA: hypothetical protein ZEAMMB73_857360 [Zea mays]
Length = 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE + L +A CL +A K+ + S D AG+
Sbjct: 108 LAVNYLDRFLSLYQLPEGKAWMTQLLSVA---CLSLAAKMEETYVPSSLDLQAGDARYVF 164
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++V +FL+ + RR V R
Sbjct: 165 EAKTIQRMELLVLSTLKWRMQAVTPLSYVDYFLHRLRGGAAPSRRAVLR 213
>gi|168062696|ref|XP_001783314.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665166|gb|EDQ51859.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 17 EEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
E + MP A Y ++ L R AI+ IL+ + LA+NY DRF+S++
Sbjct: 60 EAQFMPEADYLERYQSRKLSLEARLAAIEWILKVHSFYNYSPLTVALAVNYMDRFLSRYY 119
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALN-MELQIL 130
PE E L L + C+ +A K+ + DF + H + MEL +L
Sbjct: 120 FPE---GKEWMLQLLSVACISLAAKMEESDVPILLDFQVEQE-EHIFEAHTIQRMELLVL 175
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIKRR----HVNRIIIEAQADLSFASCKPSVIAA 186
+ LEWR V ++V +F + + R V+ II+++ + PSV+AA
Sbjct: 176 STLEWRMSGVTPFSYVDYFFHKLGVSDLLLRALLSRVSEIILKSIRVTTSLQYLPSVVAA 235
Query: 187 AALVHVCKL----------LLRDENGERPDAKRCRESLID 216
A++ +C L LLR N + + ++ ID
Sbjct: 236 ASI--ICALEEVTTIRTGDLLRTFNELLVNVESVKDCYID 273
>gi|414885824|tpg|DAA61838.1| TPA: hypothetical protein ZEAMMB73_857360 [Zea mays]
Length = 274
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE + L +A CL +A K+ + S D AG+
Sbjct: 108 LAVNYLDRFLSLYQLPEGKAWMTQLLSVA---CLSLAAKMEETYVPSSLDLQAGDARYVF 164
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++V +FL+ + RR V R
Sbjct: 165 EAKTIQRMELLVLSTLKWRMQAVTPLSYVDYFLHRLRGGAAPSRRAVLR 213
>gi|356534274|ref|XP_003535682.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 299
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 39 AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKL 98
A+ IL+ + + +L++NYFDRF+S+ +LP+ G L+ A CL +A K+
Sbjct: 56 AVNWILKVHAYYEFSPVTAFLSVNYFDRFLSRCSLPQQSGGWAFQLLSVA--CLSLAAKM 113
Query: 99 RDQSFSF-SDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN--ISSA 155
+ F D K MEL +++ L+WR R+V +++ +F++ SS+
Sbjct: 114 EESHVPFLLDLQLFEPKFVFEPKTIQRMELWVMSNLKWRLRSVTPFDYLHYFISKLPSSS 173
Query: 156 KGIKRRHV----NRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERP------ 205
H + +I+ ++F PS +AAAA +L NG+ P
Sbjct: 174 SSQSLNHFFSTSSNLILSTTRVINFLGFAPSTVAAAA-------VLCSANGQLPLSFHDR 226
Query: 206 DAKRCRESLIDSTYVD 221
+ RC L++ VD
Sbjct: 227 EMVRCCHQLMEEYVVD 242
>gi|25809160|emb|CAD32542.1| cyclin D protein [Physcomitrella patens]
gi|26190151|emb|CAD21955.1| cyclin D [Physcomitrella patens]
Length = 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 17 EEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
E + MP A Y ++ L R AI+ IL+ + LA+NY DRF+S++
Sbjct: 60 EAQFMPEADYLERYQSRKLSLEARLAAIEWILKVHSFYNYSPLTVALAVNYMDRFLSRYY 119
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALN-MELQIL 130
PE E L L + C+ +A K+ + DF + H + MEL +L
Sbjct: 120 FPE---GKEWMLQLLSVACISLAAKMEESDVPILLDFQVEQE-EHIFEAHTIQRMELLVL 175
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIKRR----HVNRIIIEAQADLSFASCKPSVIAA 186
+ LEWR V ++V +F + + R V+ II+++ + PSV+AA
Sbjct: 176 STLEWRMSGVTPFSYVDYFFHKLGVSDLLLRALLSRVSEIILKSIRVTTSLQYLPSVVAA 235
Query: 187 AALVHVCKL----------LLRDENGERPDAKRCRESLID 216
A++ +C L LLR N + + ++ ID
Sbjct: 236 ASI--ICALEEVTTIRTGDLLRTFNELLVNVESVKDCYID 273
>gi|449447295|ref|XP_004141404.1| PREDICTED: cyclin-D5-1-like [Cucumis sativus]
Length = 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 1 MDFHNVAP----DFVKYFDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRN 53
+D N +P D+V V+E S + N++ R AI IL+
Sbjct: 19 IDIANPSPAEEDDYVDTLLVKETSFGFRKDKSLMFGNWMKCARLDAIAWILKTRNVFGFG 78
Query: 54 AYIPYLALNYFDRFISKHTLP-EVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAG 111
YL++ YFDRF+S+ + E L + L A CL +A K+ + + S+F
Sbjct: 79 CQTAYLSMIYFDRFLSRRAITNEKLWAIR----LLAVACLSLASKMEELKVPALSEFPVD 134
Query: 112 NNLPRNY-SKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNRII 167
+ N+ SK MEL +LN LEW+ + +F+P+F L+I S K + +I
Sbjct: 135 DF---NFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQIVELI 191
Query: 168 IEAQADLSFASCKPSVIAAAALV 190
+ S + +PSV+AAA +
Sbjct: 192 WVMIRETSTQNHRPSVVAAATAI 214
>gi|414887071|tpg|DAA63085.1| TPA: hypothetical protein ZEAMMB73_209613 [Zea mays]
Length = 304
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLALNY DRF+SK L +LA +C + A R +FS +D +
Sbjct: 78 VAYLALNYVDRFLSKRQL-ACEQQPWAPRLLAISCLSLAAKMQRVATFSTADIQRDEDFM 136
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS--------SAKGIKRRHVNRII 167
+ + ME +L LEWR+R+V + F+ FFL+ +K R V+ ++
Sbjct: 137 FD-AVTIRRMERVVLGALEWRARSVTPLAFLGFFLSACYPPPQHPPQVAAVKARAVD-LL 194
Query: 168 IEAQADLSFASCKPS 182
+ AQ ++ A PS
Sbjct: 195 LHAQPEVKMAEFSPS 209
>gi|89111301|dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]
Length = 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRN 117
LA+NYFDRFIS + + L A CL +A K+ + Q DF +
Sbjct: 119 LAVNYFDRFISSLSFQREKPWMSQ---LVAVACLSLAAKVEETQVPLLLDFQVEESKFVF 175
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR-------HVNRIIIEA 170
+K MEL +L+ L+W+ V ++FV +I G K R+++ A
Sbjct: 176 EAKTIQRMELLVLSTLQWKMNPVTPLSFVD---HIVRRFGFKTNLHLEFLWRCERLLLSA 232
Query: 171 QADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLD 226
D F PSV+AAA ++HV K E + C+ L+D + +D +D
Sbjct: 233 ITDSRFGCYLPSVLAAATMLHVIK------EVEPSNVLDCQNELMDVLKMSKDKVD 282
>gi|90991353|dbj|BAE93057.1| cyclin [Nicotiana tabacum]
Length = 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R A++ IL+ + +A LA+NYFDRF++ L +D + LAA CL
Sbjct: 99 RVDAVEWILKVNGYYGFSALTAILAINYFDRFLTS------LHYQKDKPWMIQLAAVTCL 152
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q DF + +K MEL +L+ L+WR V ++F+ +
Sbjct: 153 SLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLD---H 209
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G+K R +++ AD F PSV+A A ++HV
Sbjct: 210 IIRRLGLKNNVHWEFLRRCESLLLSIMADCRFVRYMPSVLATAIMLHV 257
>gi|357474759|ref|XP_003607665.1| Cyclin d2 [Medicago truncatula]
gi|355508720|gb|AES89862.1| Cyclin d2 [Medicago truncatula]
Length = 342
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL++NY DRF+S + PE + + L A CL +A K+ + + G +
Sbjct: 114 YLSINYMDRFLSAYQFPE---RRDWSMQLLAVACLSLAAKVDETDVPRILELQIGESKFV 170
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLS- 175
+K +EL +L L+WR +A+ +F+ +FL S K N II++ +S
Sbjct: 171 FEAKTIQKIELLVLTTLKWRMQAITPFSFIEYFL--SKINDDKSSLNNSIILQCTQLISS 228
Query: 176 ------FASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDSFC 229
F KPS IAAA +V E + D+ + +LI Y++++ L
Sbjct: 229 TIKSPDFLEFKPSEIAAAVATYVV------EEFQAIDSSKSISTLIQ--YIEKERLLKCV 280
Query: 230 TMLDHMC 236
+ MC
Sbjct: 281 EKVQEMC 287
>gi|356508013|ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 352
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSK 120
NY DRF+ + LP+ G V + L A CL +A KL + S D G + +K
Sbjct: 119 NYLDRFLCAYELPK--GRVWT-MQLLAVACLSLAAKLDETEVPLSLDLQVGESKFLFEAK 175
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQADLSF 176
MEL +L+ L+WR +A+ F+ +FL I+ + R + R +I + F
Sbjct: 176 TIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDF 235
Query: 177 ASCKPSVIAAAALVHV 192
KPS IAAA ++V
Sbjct: 236 LEFKPSEIAAAVAMYV 251
>gi|226529395|ref|NP_001149068.1| CYCD6 [Zea mays]
gi|195624478|gb|ACG34069.1| CYCD6 [Zea mays]
gi|414887070|tpg|DAA63084.1| TPA: CYCD6 [Zea mays]
Length = 307
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLALNY DRF+SK L +LA +C + A R +FS +D +
Sbjct: 78 VAYLALNYVDRFLSKRQL-ACEQQPWAPRLLAISCLSLAAKMQRVATFSTADIQRDEDFM 136
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS--------SAKGIKRRHVNRII 167
+ + ME +L LEWR+R+V + F+ FFL+ +K R V+ ++
Sbjct: 137 FD-AVTIRRMERVVLGALEWRARSVTPLAFLGFFLSACYPPPQHPPQVAAVKARAVD-LL 194
Query: 168 IEAQADLSFASCKPS 182
+ AQ ++ A PS
Sbjct: 195 LHAQPEVKMAEFSPS 209
>gi|387915948|gb|AFK11583.1| cyclin D1 [Callorhinchus milii]
Length = 292
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS--- 69
EE +P+ Y + L P K++ L+ + K + LA+NY DR++S
Sbjct: 35 EENCLPSLSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRYLSIEL 93
Query: 70 -KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQ 128
K T ++LG C+ +A K+++ ++ + + L MEL
Sbjct: 94 TKKTHLQLLGAT----------CMFLASKMKETIPLTAEKLCIYTDNSIKPEELLQMELL 143
Query: 129 ILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVI 184
+LN L+W +V +F+ FL+ +K I R+H + D+ F S PS+I
Sbjct: 144 VLNKLKWDLASVTPHDFIEHFLSKLPVPKDSKQIIRKHAQTFVALCATDVKFISNPPSMI 203
Query: 185 AA---AALVH 191
AA AA VH
Sbjct: 204 AAGSMAAAVH 213
>gi|146231492|gb|AAV28533.2| D-type cyclin [Saccharum hybrid cultivar ROC16]
Length = 358
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S + PE + L +A CL +A K+ + D
Sbjct: 125 LSVNYLDRFLSTYEFPEDRAWMTQLLAVA---CLSLASKMEETFVPLPLDLQVAETKFVF 181
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEAQAD 173
+ MEL +LN L+WR AV A ++V +FL+ S G + R + +++
Sbjct: 182 EGRTIRRMELHVLNTLKWRMHAVTACSYVKYFLHKLSDHGAPSLLARSRSSDLVLSTAKG 241
Query: 174 LSFASCKPSVIAAA 187
F +PS IAA+
Sbjct: 242 AEFVVFRPSEIAAS 255
>gi|62859391|ref|NP_001016108.1| cyclin Dx [Xenopus (Silurana) tropicalis]
gi|89269075|emb|CAJ83744.1| novel cyclin [Xenopus (Silurana) tropicalis]
gi|96997660|gb|ABF57995.1| Cyclin Dx [Xenopus (Silurana) tropicalis]
gi|166796557|gb|AAI58908.1| cyclin Dx [Xenopus (Silurana) tropicalis]
Length = 290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
+K +EE+ +P+A Y + + ++R +L+ + K + LA+N DR
Sbjct: 28 LMKLLALEERYIPSASYFRCVQRDIQPYMRHMLTCWMLEVCEDQKCGEEVFPLAVNCLDR 87
Query: 67 FISKHTLPEVLGNVED-DLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHA--- 122
++S L VE L L CL +A KLR+ S M +L YS H
Sbjct: 88 YLS-------LVPVEKRHLQLLGATCLFLASKLRE-----SKPMTAESLCM-YSDHCFTD 134
Query: 123 ---LNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLS 175
L MEL +LN L+W V ++P FL + + K R+H I D +
Sbjct: 135 KELLAMELLVLNKLKWDLEVVTPREYLPHFLELLNIPAEKRPQVRKHSETFIALCTTDCT 194
Query: 176 FASCKPSV 183
F + PS+
Sbjct: 195 FIALPPSM 202
>gi|33517432|gb|AAQ19972.1| cyclin D3-2 [Euphorbia esula]
Length = 355
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCCL 92
R AI IL+ NA LA+NYFDRFIS +G LAA CL
Sbjct: 82 RKEAIDWILRVKGFYGFNALSCVLAVNYFDRFISSLVFTRDKPWMGQ------LAAVACL 135
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q D + +K MEL +L+ L+WR V + +F +
Sbjct: 136 SLAAKMEETQVPLLLDLQVEESKYVFEAKTIKRMELLVLSTLQWRMNPVTP---ICYFDH 192
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
I G+K R +++ +D F S PS++A + ++HV K
Sbjct: 193 IIRRLGLKNHLHWEFLRRCELLLLSVISDSRFMSYAPSILATSIMIHVIK 242
>gi|221271526|dbj|BAH15074.1| cyclin D3 [Ipomoea batatas]
Length = 361
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R +A++ IL+ + + P LA+NY DRF+S L ED + LAA CL
Sbjct: 83 RTQAVRWILKVNAHYGFSPLTPTLAVNYLDRFLSG------LQYQEDKPWMIQLAAVACL 136
Query: 93 IIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + DF + +K MEL +L+ L+WR V ++F+ +
Sbjct: 137 SLAAKVEETHVPLLLDFQVEDAEFVFDAKTIQKMELLVLSTLKWRMNPVTPLSFLD---H 193
Query: 152 ISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I+ G+K +I+ D F PSV+A A ++HV
Sbjct: 194 ITRRLGLKNHLHWEFFTKCESLILSFMPDSRFVRFLPSVLATATMLHV 241
>gi|357148138|ref|XP_003574644.1| PREDICTED: cyclin-D4-2-like [Brachypodium distachyon]
Length = 353
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YLA+NY DRF+S++ LPE + L +A CL +A K+ + S D G
Sbjct: 113 YLAVNYLDRFLSRYELPEDKAWMAQLLSVA---CLSLAAKMEETYVPRSLDLQIGEEQYA 169
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+K MEL +L+ L WR +AV +++ +FL
Sbjct: 170 FEAKTIQRMELIVLSTLNWRMQAVTPFSYIDYFLG 204
>gi|110737225|dbj|BAF00560.1| cyclin protein - like [Arabidopsis thaliana]
Length = 298
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G +LA CL +A K+ + + G +
Sbjct: 92 LAMNYLDRFLSVHDLPS--GKAWTVQLLAV-ACLSLAAKIEETNVPELMQLQVGAPMFVF 148
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR----RHVNR---IIIEA 170
+K MEL +LN L WR RAV ++V +FL S G + R V R +I
Sbjct: 149 EAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFL--SKINGYDQEPHSRLVTRSLQVIAST 206
Query: 171 QADLSFASCKPSVIAAAALVHV 192
+ F + S IAA + V
Sbjct: 207 TKGIDFLEFRASEIAATVALSV 228
>gi|449530548|ref|XP_004172256.1| PREDICTED: cyclin-D5-1-like, partial [Cucumis sativus]
Length = 242
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 1 MDFHNVAP----DFVKYFDVEEKSM---PAAGYAYINEANFLRPRAIKVILQNSKSNKRN 53
+D N +P D+V V+E S + N R AI IL+
Sbjct: 19 IDIANPSPAEEDDYVDTLLVKETSFGFRKDKSLVFGNWMKCARLDAIAWILKTRNVFGFG 78
Query: 54 AYIPYLALNYFDRFISKHTLP-EVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAG 111
YL++ YFDRF+S+ + E L + L A CL +A K+ + + S+F
Sbjct: 79 CQTAYLSMIYFDRFLSRRAITNEKLWAIR----LLAVACLSLASKMEELKVPALSEFPVD 134
Query: 112 NNLPRNY-SKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNRII 167
+ N+ SK MEL +LN LEW+ + +F+P+F L+I S K + +I
Sbjct: 135 DF---NFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQIVELI 191
Query: 168 IEAQADLSFASCKPSVIAAAALV 190
+ S + +PSV+AAA +
Sbjct: 192 WVMIRETSTQNHRPSVVAAATAI 214
>gi|118482952|gb|ABK93388.1| unknown [Populus trichocarpa]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCC 91
+R A++ L+ +A LA+NYFDRFIS +G LAA C
Sbjct: 97 VRREAVEWFLRVKAHYGFSALTGVLAVNYFDRFISSSRFRRDKPWMGQ------LAAVAC 150
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
L +A K+ + Q D + +K MEL +L+ L WR V +++F F
Sbjct: 151 LSLAAKVEETQVPLLLDLQVEDAKYVFEAKTIKRMELWVLSTLHWRMNPVTSISF---FD 207
Query: 151 NISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
+I G+K R+++ +D F S PS++A A ++HV K
Sbjct: 208 HIIRRLGLKTHMHWEFLWRCERLLLSVISDSRFMSYLPSILATATMLHVIK 258
>gi|224081763|ref|XP_002306487.1| predicted protein [Populus trichocarpa]
gi|159025721|emb|CAN88861.1| D3-type cyclin [Populus trichocarpa]
gi|222855936|gb|EEE93483.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCC 91
+R A++ L+ +A LA+NYFDRFIS +G LAA C
Sbjct: 97 VRREAVEWFLRVKAHYGFSALTGVLAVNYFDRFISSSRFRRDKPWMGQ------LAAVAC 150
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
L +A K+ + Q D + +K MEL +L+ L WR V +++F F
Sbjct: 151 LSLAAKVEETQVPLLLDLQVEDAKYVFEAKTIKRMELWVLSTLHWRMNPVTSISF---FD 207
Query: 151 NISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
+I G+K R+++ +D F S PS++A A ++HV K
Sbjct: 208 HIIRRLGLKTHMHWEFLWRCERLLLSVISDSRFMSYLPSILATATMLHVIK 258
>gi|29374148|gb|AAO72990.1| cyclin D [Populus alba]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCC 91
+R A++ L+ +A LA+NYFDRFIS +G LAA C
Sbjct: 97 VRREAVEWFLRVKAHYGFSALTGVLAVNYFDRFISSSRFRRDKPWMGQ------LAAVAC 150
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
L +A K+ + Q D + +K MEL +L+ L WR V +++F F
Sbjct: 151 LSLAAKVEETQVPLLLDLQVEDAKYVFEAKTIKRMELWVLSTLHWRMNPVTSISF---FD 207
Query: 151 NISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
+I G+K R+++ +D F S PS++A A ++HV K
Sbjct: 208 HIIRRLGLKTHMHWEFLWRCERLLLSVISDSRFMSYLPSILATATMLHVIK 258
>gi|147905454|ref|NP_001087717.1| MGC83948 protein [Xenopus laevis]
gi|51703535|gb|AAH81132.1| MGC83948 protein [Xenopus laevis]
Length = 289
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 19 KSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE 75
+ +P Y + + ++R +L+ + K + LA+N DRF+S
Sbjct: 36 RHIPCISYFHCVQTRLQPYMRRMLTSWMLEVCEEQKCGEDVFPLAVNCLDRFLS------ 89
Query: 76 VLGNVED-DLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLE 134
L VE L L + CL +A KLRD + ++ + + K L MEL +LN L+
Sbjct: 90 -LVPVEKRHLQLLGSTCLFLASKLRDSTPMTAESLCMYSDYCFTDKELLAMELLVLNKLK 148
Query: 135 WRSRAVVAVNFVPFFLNISSAKGIKRRHVNRI----IIEAQADLSFASCKPSV 183
W AV F+P FL + KR V ++ I D +F + PS+
Sbjct: 149 WDIEAVTPRQFLPHFLELLVIPTEKRPRVRKLAETFITLCSTDCTFITLPPSM 201
>gi|414589709|tpg|DAA40280.1| TPA: hypothetical protein ZEAMMB73_495366 [Zea mays]
Length = 361
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE L +A CL +A K+ + S D G+
Sbjct: 112 LAVNYLDRFLSLYQLPEGKSWTTQLLSVA---CLSLAAKMEETYVPPSLDLQVGDARYVF 168
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L WR RAV +++ +FL+ + RR V R
Sbjct: 169 EAKTVQRMELLVLSTLRWRMRAVTPFSYIDYFLHRLKDGGAPSRRAVLR 217
>gi|115476916|ref|NP_001062054.1| Os08g0479300 [Oryza sativa Japonica Group]
gi|147636834|sp|Q4KYM5.2|CCD42_ORYSJ RecName: Full=Cyclin-D4-2; AltName: Full=G1/S-specific cyclin-D4-2;
Short=CycD4;2
gi|42408572|dbj|BAD09749.1| putative D-type cyclin [Oryza sativa Japonica Group]
gi|113624023|dbj|BAF23968.1| Os08g0479300 [Oryza sativa Japonica Group]
gi|125603767|gb|EAZ43092.1| hypothetical protein OsJ_27684 [Oryza sativa Japonica Group]
Length = 383
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R AI I + ++ YLA+NY DRF+S++ LPE + L +A CL I
Sbjct: 109 VRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVA---CLSI 165
Query: 95 AWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NI 152
A K+ + D G + MEL +L L WR +AV +++ +FL +
Sbjct: 166 AAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKL 225
Query: 153 SSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
+S R + R +I+ A F +PS I
Sbjct: 226 NSGNAAPRSWLLRSSELILRIAAGTGFLEFRPSEI 260
>gi|357138020|ref|XP_003570596.1| PREDICTED: cyclin-D3-1-like [Brachypodium distachyon]
Length = 352
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 17 EEKSMPAAGYAY-----INEANF--LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
EE+ MP GY + E + +R A+ I + + L++NY DRF+S
Sbjct: 73 EEEHMPKEGYPQELRRPLGELDLAAVRRDAVDWIWKVIEHYNFEPLTAVLSVNYLDRFLS 132
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQ 128
+ LPE + L +A CL +A K+ + D G+ ++ MEL
Sbjct: 133 VYELPEGKAWMTQLLAVA---CLSLAAKMEETYVPLPLDLQVGDAKFVFEARTIKRMELL 189
Query: 129 ILNGLEWRSRAVVAVNFVPFFLN 151
+L L+WR RAV A +F+ +FL+
Sbjct: 190 VLRILKWRMRAVTACSFIDYFLH 212
>gi|242079527|ref|XP_002444532.1| hypothetical protein SORBIDRAFT_07g023350 [Sorghum bicolor]
gi|241940882|gb|EES14027.1| hypothetical protein SORBIDRAFT_07g023350 [Sorghum bicolor]
Length = 373
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YLA+NY DRF+S++ LP+ + L +A C+ +A K+ + + S D G+
Sbjct: 120 YLAVNYLDRFLSRYELPDGKDWMTQLLSVA---CVSLAAKMEETAVPQSLDLQVGDARYV 176
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+K MEL +L+ L WR +AV +++ +FLN
Sbjct: 177 FEAKTIQRMELLVLSTLNWRMQAVTPFSYMDYFLN 211
>gi|44889865|gb|AAS48460.1| cyclin D3-2 [Euphorbia esula]
Length = 355
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCCL 92
R AI IL+ NA LA+NYFDRFIS +G LAA CL
Sbjct: 82 RKEAIDWILRVKGFYGFNALSCVLAVNYFDRFISSLVFTRDKPWMGQ------LAAVACL 135
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q D + +K MEL +L+ L+WR V + +F +
Sbjct: 136 SLAAKMEETQVPLLLDLQVEESKYVFEAKTIKRMELLVLSTLQWRMNPVTP---ICYFDH 192
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
I G+K R +++ +D F S PS++A ++HV K
Sbjct: 193 IIRRLGLKNHLHWEFLRRCELLLLSVISDSRFMSYAPSILATLIMIHVIK 242
>gi|345305554|ref|XP_001506630.2| PREDICTED: G1/S-specific cyclin-D1-like [Ornithorhynchus anatinus]
Length = 308
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 43 ILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS 102
+LQ + K + LA+NY DRF+S L + + L L C+ +A K+++
Sbjct: 80 LLQVCEEQKCEEEVFPLAMNYLDRFLSLEPLKK------NRLQLLGATCMFVASKMKETI 133
Query: 103 FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGI 158
++ + L MEL ++N L+W A+ +F+ FL+ K I
Sbjct: 134 PLTAEKLCIYTDNSIRPDELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPLAEENKQI 193
Query: 159 KRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
R+H + D+ F S PS+IAA ++V
Sbjct: 194 IRKHAQTFVALCATDVKFISNPPSMIAAGSVV 225
>gi|147636468|sp|Q8H339.2|CCD12_ORYSJ RecName: Full=Cyclin-D1-2; AltName: Full=G1/S-specific cyclin-D1-2;
Short=CycD1;2
Length = 354
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA++Y DRF+S H LP GN +LA CL +A K+ + S D +
Sbjct: 138 YLAVSYMDRFLSLHRLP---GNGWAMQLLAVT-CLSLAAKMEETLVPSILDLQMEDARYI 193
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQA---- 172
+ MEL +L+ L+WR R++ F+ F + G +H+ +I +A
Sbjct: 194 FEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNG---KHIRELIHQATQVTLA 250
Query: 173 ---DLSFASCKPSVIAAAALV 190
D F PS IAAAA++
Sbjct: 251 TIHDTEFLDHCPSSIAAAAVL 271
>gi|224050473|ref|XP_002186752.1| PREDICTED: G1/S-specific cyclin-D1 [Taeniopygia guttata]
gi|449270744|gb|EMC81400.1| G1/S-specific cyclin-D1 [Columba livia]
Length = 292
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 35 EETCSPSVSYFKCVQKEIL-PYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSFEP 93
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
L + L L C+ +A K+++ ++ + L MEL ++N
Sbjct: 94 LKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLLVNK 147
Query: 133 LEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W A+ +F+ FL K I R+H + D+ F S PS+IAA +
Sbjct: 148 LKWNLAAMTPHDFIEHFLTKMPLAEDTKQIIRKHAQTFVALCATDIKFISNPPSMIAAGS 207
Query: 189 LV 190
+V
Sbjct: 208 VV 209
>gi|255538076|ref|XP_002510103.1| cyclin d, putative [Ricinus communis]
gi|223550804|gb|EEF52290.1| cyclin d, putative [Ricinus communis]
Length = 327
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N F R AI IL+N YL++ YFDRF+S+ ++ L +A
Sbjct: 67 NWVKFARLEAITWILKNRAIFGFGFQTAYLSITYFDRFLSRRSIDREKSWAVKLLSVA-- 124
Query: 90 CCLIIAWKLRDQSFS-FSDFMAGNNLPRNY-SKHALNMELQILNGLEWRSRAVVAVNFVP 147
CL +A K+ + S+F N+ SK MEL +LN LEWR + F+
Sbjct: 125 -CLSLAAKMEEIKVPPLSNFQIEEY---NFESKVIQRMELLVLNTLEWRMISSTPFAFLH 180
Query: 148 FFLNISSAKGIKRRH-VNR---IIIEAQADLSFASCKPSVIAAAA 188
+F+ S + RH V+R +I +++ +PSVIAAAA
Sbjct: 181 YFIIKFSKEPPPSRHLVSRTVGLIFAVVKEITSMEHRPSVIAAAA 225
>gi|357482617|ref|XP_003611595.1| Cyclin-D5-1 [Medicago truncatula]
gi|355512930|gb|AES94553.1| Cyclin-D5-1 [Medicago truncatula]
Length = 353
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI I YL++NYFDRF+SK ++ E + + L + CL IA
Sbjct: 103 RLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDE---SKPWAIQLLSVACLSIA 159
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNY---SKHALNMELQILNGLEWRSRAVVAVNFVPFFL- 150
K+ +QS S++ P Y +K NMEL IL+ LEW+ ++ +F
Sbjct: 160 AKMEEQSVPPLSEY------PIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFT 213
Query: 151 ---NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
N S ++ I + I+ + D + + +PS IA+A+++
Sbjct: 214 KFCNGSRSETIITKATQHIVTMVK-DFNLMNQRPSTIASASIL 255
>gi|15229665|ref|NP_190576.1| cyclin-D3-3 [Arabidopsis thaliana]
gi|75313638|sp|Q9SN11.1|CCD33_ARATH RecName: Full=Cyclin-D3-3; AltName: Full=G1/S-specific cyclin-D3-3;
Short=CycD3;3
gi|6522928|emb|CAB62115.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|15450595|gb|AAK96569.1| AT3g50070/F3A4_150 [Arabidopsis thaliana]
gi|17380632|gb|AAL36079.1| AT3g50070/F3A4_150 [Arabidopsis thaliana]
gi|21593092|gb|AAM65041.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|332645102|gb|AEE78623.1| cyclin-D3-3 [Arabidopsis thaliana]
Length = 361
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 34/233 (14%)
Query: 26 YAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED 82
Y I + FL R +A+ I + N+ LA+NYFDRFI+ +
Sbjct: 73 YDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQ 132
Query: 83 DLVLAANCCLIIAWKLRDQSFSF-SDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVV 141
L A CL +A K+ + F DF +K MEL +L+ L+WR V
Sbjct: 133 ---LTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVT 189
Query: 142 AVNFVPFFLNISSAKGIKRRH-------VNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
++ FF +I K H +++ D F S PSV+A A +V V +
Sbjct: 190 PIS---FFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIR 246
Query: 195 LLLRDENGERPDAKRCRESLIDSTYVDEDSLDS------FCTMLDHMCCRKKM 241
D K C E++ S + +DS + +LDH +K+M
Sbjct: 247 -----------DLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSPSKKRM 288
>gi|18858509|ref|NP_571100.1| G1/S-specific cyclin-D1 [Danio rerio]
gi|189230144|ref|NP_001121396.1| uncharacterized protein LOC100158484 [Xenopus (Silurana)
tropicalis]
gi|3023475|sp|Q90459.1|CCND1_DANRE RecName: Full=G1/S-specific cyclin-D1
gi|1143441|emb|CAA60885.1| Cyclin D1 [Danio rerio]
gi|49899159|gb|AAH75743.1| Cyclin D1 [Danio rerio]
gi|156914837|gb|AAI52629.1| Cyclin D1 [Danio rerio]
gi|183985596|gb|AAI66096.1| LOC100158484 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE +P+ Y + + P+ K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEENYLPSPNYFKCVQKEIV-PKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 ----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNM 125
K T ++LG C+ +A K+++ ++ + L M
Sbjct: 91 VEPTKKTRLQLLGAT----------CMFLASKMKETVPLTAEKLCIYTDNSVRPGELLQM 140
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKP 181
EL LN L+W +V +F+ FL S+K I R+H + D++F + P
Sbjct: 141 ELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDVNFIASPP 200
Query: 182 SVIAAAAL 189
S+IAA ++
Sbjct: 201 SMIAAGSV 208
>gi|356511899|ref|XP_003524659.1| PREDICTED: cyclin-D3-2-like [Glycine max]
Length = 383
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ + + S +A LA+NYFDRFI+ + LAA CL +A
Sbjct: 107 RVEAVNWVSKVSGHYGFSALTTVLAVNYFDRFITSLKFQRDKPWMTQ---LAAVACLSLA 163
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K + D + +K MEL +L+ L+WR ++ V + FF +I
Sbjct: 164 AKTEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWR---MLPVTPISFFEHIVR 220
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
G+K R R+++ AD S PS +AAA ++HV K
Sbjct: 221 RLGLKSRLHWEFLWRCERVLLNIIADSRVMSYLPSTLAAATMIHVIK 267
>gi|45382411|ref|NP_990712.1| G1/S-specific cyclin-D1 [Gallus gallus]
gi|1705781|sp|P55169.1|CCND1_CHICK RecName: Full=G1/S-specific cyclin-D1
gi|1118005|gb|AAA83271.1| cyclin D1 [Gallus gallus]
Length = 292
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 35 EETCSPSVSYFKCVQKEIL-PYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSFEP 93
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
L + L L C+ +A K+++ ++ + L MEL ++N
Sbjct: 94 LKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLLVNK 147
Query: 133 LEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W A+ +F+ FL K I R+H + D+ F S PS+IAA +
Sbjct: 148 LKWNLAAMTPHDFIEHFLTKMPLAEDTKQIIRKHAQTFVALCATDVKFISNPPSMIAAGS 207
Query: 189 LV 190
+V
Sbjct: 208 VV 209
>gi|387015338|gb|AFJ49788.1| Cyclin D1 [Crotalus adamanteus]
Length = 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DR++S
Sbjct: 32 LKAEETCSPSVSYFKCVQKEIL-PYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L MEL +
Sbjct: 91 FEPIKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPNELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIA 185
+N L+W A +F+ FLN +K I R+H + D+ F S PS+IA
Sbjct: 145 VNKLKWNLAATTPHDFIEHFLNKMPVAEDSKQIIRKHAQTFVALCATDVKFISNPPSMIA 204
Query: 186 AAALV 190
A ++V
Sbjct: 205 AGSVV 209
>gi|19070615|gb|AAL83928.1|AF351191_1 D-type cyclin [Zea mays]
Length = 390
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ I + ++ YLA+NY DRF+S +P+ + L +A C+ +
Sbjct: 91 VRREAVDWIWKAYTHHRFRPLTAYLAVNYLDRFLSLSEVPDGKDWMTQLLAVA---CVSL 147
Query: 95 AWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + + D G+ +K MEL +L L WR AV ++V +FLN
Sbjct: 148 AAKMEETAVPQCLDLQVGDARYVFEAKTVQRMELLVLTTLNWRMHAVTPFSYVDYFLNKL 207
Query: 154 SAKG 157
S G
Sbjct: 208 SNGG 211
>gi|255579724|ref|XP_002530701.1| cyclin d, putative [Ricinus communis]
gi|223529757|gb|EEF31696.1| cyclin d, putative [Ricinus communis]
Length = 366
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S + LP+ G +LA CL +A K+ + + S D G
Sbjct: 121 LSMNYLDRFLSVYQLPK--GKAWTMQLLAV-ACLSLAAKMEETNVPLSVDLQVGEPKFVF 177
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSFA 177
+K MEL +L+ L+WR +++ +F+ ++L + +G + + + Q LS
Sbjct: 178 EAKTIQRMELLVLSTLKWRMQSLTPCSFIDYYL--AKIRGNQHLSTSLVTRSLQLILSII 235
Query: 178 SC------KPSVIAAAALVHV 192
C +PS IAAA + V
Sbjct: 236 KCIDFLEFRPSEIAAAVAIFV 256
>gi|414589710|tpg|DAA40281.1| TPA: hypothetical protein ZEAMMB73_495366 [Zea mays]
Length = 291
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE L +A CL +A K+ + S D G+
Sbjct: 112 LAVNYLDRFLSLYQLPEGKSWTTQLLSVA---CLSLAAKMEETYVPPSLDLQVGDARYVF 168
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L WR RAV +++ +FL+ + RR V R
Sbjct: 169 EAKTVQRMELLVLSTLRWRMRAVTPFSYIDYFLHRLKDGGAPSRRAVLR 217
>gi|19880484|gb|AAM00355.1|AF365874_1 cyclin D1 [Danio rerio]
Length = 291
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE +P+ Y + + P+ K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEENYLPSPNYFKCVQKEIV-PKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
V ++ L L C+ +A K+++ ++ + L MEL
Sbjct: 91 ------VEPTKKNRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNSVRPGELLQMELLA 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIA 185
LN L+W +V +F+ FL S+K I R+H + D++F + PS+IA
Sbjct: 145 LNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDVNFIASPPSMIA 204
Query: 186 AAAL 189
A ++
Sbjct: 205 AGSV 208
>gi|357119709|ref|XP_003561577.1| PREDICTED: putative cyclin-D2-3-like [Brachypodium distachyon]
Length = 338
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 48 KSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS 104
K R ++ P YLA+NY DRF+S LP + L +A CL +A K+ +
Sbjct: 94 KVQARYSFGPLCVYLAVNYLDRFLSSKQLPNEAPWTQQLLAVA---CLSLAAKMEETVVP 150
Query: 105 FS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
S DF A + ME+ +L+ LEWR +V +++ +FLN
Sbjct: 151 LSQDFQACGTKYVFEANAIQRMEVLLLSALEWRMHSVTPFSYIAYFLN 198
>gi|414885822|tpg|DAA61836.1| TPA: hypothetical protein ZEAMMB73_857360 [Zea mays]
Length = 356
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF--SFSDFMAGNNLPR 116
LA+NY DRF+S + LPE + L +A CL +A K+ + S AG+
Sbjct: 108 LAVNYLDRFLSLYQLPEGKAWMTQLLSVA---CLSLAAKMEETYVPSSLDLQQAGDARYV 164
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++V +FL+ + RR V R
Sbjct: 165 FEAKTIQRMELLVLSTLKWRMQAVTPLSYVDYFLHRLRGGAAPSRRAVLR 214
>gi|357122460|ref|XP_003562933.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D6-1-like [Brachypodium
distachyon]
Length = 285
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLALNY DR++SK LP L LA +C I A R + S +D
Sbjct: 73 VAYLALNYVDRYLSKRQLPCEHKPWAPRL-LAVSCLSIAAKMQRVDAISIADIQRDEEFM 131
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL--------NISSAKGIKRRHVNRII 167
+ + ME +L LEWR+R+V + F+ FFL + +K R V+ ++
Sbjct: 132 FD-AVSIRRMERLVLGALEWRARSVTPLAFLGFFLSECFPPPRHPPLLAAVKARAVD-LL 189
Query: 168 IEAQADL 174
+ AQ DL
Sbjct: 190 LRAQPDL 196
>gi|222640567|gb|EEE68699.1| hypothetical protein OsJ_27347 [Oryza sativa Japonica Group]
Length = 330
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA++Y DRF+S H LP GN +LA CL +A K+ + S D +
Sbjct: 138 YLAVSYMDRFLSLHRLP---GNGWAMQLLAVT-CLSLAAKMEETLVPSILDLQMEDARYI 193
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQA---- 172
+ MEL +L+ L+WR R++ F+ F + G +H+ +I +A
Sbjct: 194 FEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNG---KHIRELIHQATQVTLA 250
Query: 173 ---DLSFASCKPSVIAAAALV 190
D F PS IAAAA++
Sbjct: 251 TIHDTEFLDHCPSSIAAAAVL 271
>gi|4160300|emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]
Length = 373
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R +++ IL+ + +A LA+NYFDRF++ L +D + LAA CL
Sbjct: 103 RVDSVEWILKVNGYYGFSALTAVLAINYFDRFLTS------LHYQKDKPWMIQLAAVTCL 156
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q DF + +K MEL +L+ L+WR V ++F+ +
Sbjct: 157 SLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLD---H 213
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G++ R +++ AD F PSV+A A ++HV
Sbjct: 214 IIRRLGLRNNIHWEFLRRCENLLLSIMADCRFVRYMPSVLATAIMLHV 261
>gi|60822866|gb|AAX36623.1| cyclin D3 [synthetic construct]
Length = 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 R------VPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ F L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|224096702|ref|XP_002310704.1| predicted protein [Populus trichocarpa]
gi|159025719|emb|CAN88860.1| D3-type cyclin [Populus trichocarpa]
gi|222853607|gb|EEE91154.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL---PEVLGNVEDDLVLAANCCL 92
R A++ L+ +A LA+NYFDRFIS +G LAA CL
Sbjct: 95 RREAVEWFLRVKAHYGFSALTGVLAVNYFDRFISSSRFQRDKSWMGQ------LAAVACL 148
Query: 93 IIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + D + +K MEL +L+ L+WR V +++F F +
Sbjct: 149 SLAAKVEETHVPLLLDLQVEDAKYIFEAKTIKRMELLVLSTLQWRMNPVTSISF---FDH 205
Query: 152 ISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
I G+K R+++ +D F S PS++A ++HV K
Sbjct: 206 IIRRLGLKTHLHWEFLWRCERLLLSVISDSRFMSYLPSILATVTMLHVIK 255
>gi|90991355|dbj|BAE93058.1| cyclin [Nicotiana tabacum]
Length = 373
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R +++ IL+ + +A LA+NYFDRF++ L +D + LAA CL
Sbjct: 103 RVDSVEWILKVNGYYGFSALTAVLAINYFDRFLTS------LHYQKDKPWMIQLAAVTCL 156
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q DF + +K MEL +L+ L+WR V ++F+ +
Sbjct: 157 SLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLD---H 213
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G++ R +++ AD F PSV+A A ++HV
Sbjct: 214 IIRRLGLRNNIHWEFLRRCENLLLSIMADCRFVRYMPSVLATAIMLHV 261
>gi|7671459|emb|CAB89399.1| cyclin protein-like [Arabidopsis thaliana]
Length = 317
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DRF+S H LP G +LA CL +A K+ + + G +
Sbjct: 92 LAMNYLDRFLSVHDLPS--GKAWTVQLLAV-ACLSLAAKIEETNVPELMQLQVGAPMFVF 148
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+K MEL +LN L WR RAV ++V +FL+
Sbjct: 149 EAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLS 182
>gi|224008673|ref|XP_002293295.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970695|gb|EED89031.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 339
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 56 IPYLALNYFDRFISKHTLPEVL-GNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAG--- 111
I + + YFDRF+S L G+ E L CLI++ K R+ DF+
Sbjct: 73 IAVIGIQYFDRFMSSKLGSRFLIGSREFQLAFIG--CLIVSLKAREGMVFEVDFITNVLC 130
Query: 112 NNLPRNYSK-HALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGI--------KRRH 162
NNL YS+ L +E+++L LEWR +FV +FL++ S + +
Sbjct: 131 NNL---YSQCEILAIEIEVLIALEWRLNGPTPQDFVGYFLDLYSYSSMFADERVVETLKQ 187
Query: 163 VNRIIIE-AQADLSFASCKPSVIAAAALV 190
+ +++E A D + A PS IA AAL+
Sbjct: 188 SSLVLVEQAMTDYALALQTPSSIAYAALL 216
>gi|218201324|gb|EEC83751.1| hypothetical protein OsI_29617 [Oryza sativa Indica Group]
Length = 318
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R AI I + ++ YLA+NY DRF+S++ LPE + L +A CL I
Sbjct: 41 VRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVA---CLSI 97
Query: 95 AWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NI 152
A K+ + D G + MEL +L L WR +AV +++ +FL +
Sbjct: 98 AAKMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKL 157
Query: 153 SSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
+ R + R +I+ A F +PS I
Sbjct: 158 NGGNAAPRSWLLRSSELILRIAAGTGFLEFRPSEI 192
>gi|224983654|pdb|3G33|B Chain B, Crystal Structure Of Cdk4CYCLIN D3
gi|224983656|pdb|3G33|D Chain D, Crystal Structure Of Cdk4CYCLIN D3
Length = 306
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 27/188 (14%)
Query: 16 VEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKH 71
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 48 LEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS-- 104
Query: 72 TLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------NM 125
+ + L L C+++A KLR+ + + + Y+ HA+ +
Sbjct: 105 ----CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLRDW 154
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASCKP 181
E+ +L L+W AV+A +F+ F L+ S + + ++H + D +FA P
Sbjct: 155 EVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPP 214
Query: 182 SVIAAAAL 189
S+IA ++
Sbjct: 215 SMIATGSI 222
>gi|413924449|gb|AFW64381.1| D-type cyclin [Zea mays]
Length = 360
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR--------DQSFSFSDFM- 109
L++NY DRF+S + PE + L +A CL +A K+ D + + F+
Sbjct: 127 LSVNYLDRFLSTYEFPEGRAWMTQLLAVA---CLSLASKIEETFVPLPLDLQVAEAKFVF 183
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNR 165
G + R MEL +L+ L+WR AV A +FV +FL+ S G + R +
Sbjct: 184 EGRTIKR--------MELLVLSTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSD 235
Query: 166 IIIEAQADLSFASCKPSVIAAA 187
+++ F +PS IAA+
Sbjct: 236 LVLSTAKGAEFVVFRPSEIAAS 257
>gi|162464115|ref|NP_001105048.1| LOC541915 [Zea mays]
gi|19070611|gb|AAL83926.1|AF351189_1 D-type cyclin [Zea mays]
Length = 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR--------DQSFSFSDFM- 109
L++NY DRF+S + PE + L +A CL +A K+ D + + F+
Sbjct: 125 LSVNYLDRFLSTYEFPEGRAWMTQLLAVA---CLSLASKIEETFVPLPLDLQVAEAKFVF 181
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNR 165
G + R MEL +L+ L+WR AV A +FV +FL+ S G + R +
Sbjct: 182 EGRTIKR--------MELLVLSTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSD 233
Query: 166 IIIEAQADLSFASCKPSVIAAA 187
+++ F +PS IAA+
Sbjct: 234 LVLSTAKGAEFVVFRPSEIAAS 255
>gi|348510070|ref|XP_003442569.1| PREDICTED: G1/S-specific cyclin-D2-like [Oreochromis niloticus]
Length = 317
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 26/194 (13%)
Query: 12 KYFDVEEKSMPAAGY-AYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+ VEE+ MP+ Y I+ R K L+ + + L+++ DRF+S
Sbjct: 55 RLLHVEERYMPSMLYITLIHRDPERREELAKWALEVCCECGCDETVFPLSVSLMDRFLSA 114
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNN----LPRNYSKHALNME 126
++ L A C++IA KL + +D + LP N L ME
Sbjct: 115 SL------SIPVSLYCLAAGCILIASKLTECDSVTADTLCAAAEYSFLPSNL----LEME 164
Query: 127 LQILNGLEWRSRAVVAVNFVPFFLNISSAKG-----------IKRRHVNRIIIEAQADLS 175
IL L W + AV +F+P FL +G RRH + + D
Sbjct: 165 RVILATLRWDTAAVTPQDFLPHFLACVEERGDSGESAEEQLSTLRRHSDTLAAMCVCDSR 224
Query: 176 FASCKPSVIAAAAL 189
F PS++AAA+L
Sbjct: 225 FLGALPSLVAAASL 238
>gi|242044988|ref|XP_002460365.1| hypothetical protein SORBIDRAFT_02g027020 [Sorghum bicolor]
gi|241923742|gb|EER96886.1| hypothetical protein SORBIDRAFT_02g027020 [Sorghum bicolor]
Length = 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE L +A CL +A K+ + S D G+
Sbjct: 114 LAVNYLDRFLSLYQLPEGKAWTTQLLSVA---CLSLAAKMEETYVPPSLDLQVGDARYVF 170
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++ +F LN RR V R
Sbjct: 171 EAKTIQRMELLVLSTLKWRMQAVTPFSYIDYFLHRLNGGGGDAPSRRAVLR 221
>gi|388497020|gb|AFK36576.1| unknown [Medicago truncatula]
Length = 273
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ + YL++NY DRF+ LPE G L L + CL +A
Sbjct: 94 REEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGW---PLQLLSVACLSLA 150
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
K+ + S DF K L MEL +L L+WR R++ ++F+ FF
Sbjct: 151 AKMEEPLVPSLLDFQIEGAKYIFQPKTILRMELLVLTILDWRLRSITPLSFLSFF 205
>gi|54043089|gb|AAV28532.1| D-type cyclin [Saccharum hybrid cultivar ROC16]
Length = 343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LPE L +A CL +A K+ + S D G+
Sbjct: 111 LAVNYLDRFLSLYQLPEGKAWTTQLLSVA---CLSLAAKMEETYVPPSLDLQIGDARYVF 167
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR 165
+K MEL +L+ L+WR +AV +++ +FL+ ++ RR V R
Sbjct: 168 EAKTIQRMELLVLSTLKWRMQAVTPFSYIDYFLHRLNGGDAPSRRAVLR 216
>gi|242066590|ref|XP_002454584.1| hypothetical protein SORBIDRAFT_04g033870 [Sorghum bicolor]
gi|241934415|gb|EES07560.1| hypothetical protein SORBIDRAFT_04g033870 [Sorghum bicolor]
Length = 358
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 17 EEKSMPAAGYAYINEANF-------LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
E + MPA GY + +R A+ I + ++ L++NY DRF+S
Sbjct: 76 EVEHMPAEGYPQKLQRRHGDLDLAAVRKDAVDWIWKVTEHYNFAPLTAVLSVNYLDRFLS 135
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQ 128
+ PE + L +A CL +A K+ + D + MEL
Sbjct: 136 TYEFPEDRAWMTQLLAVA---CLSLASKMEETFVPLPLDLQVAETRFVFEGRTIRRMELH 192
Query: 129 ILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEAQADLSFASCKPSVI 184
+L+ L+WR AV A +FV FL+ S G + R + +++ F +PS I
Sbjct: 193 VLSTLKWRMHAVTACSFVEHFLHKLSDHGAPSLLARSRSSDLVLSTAKGAEFVVFRPSEI 252
Query: 185 AAA 187
AA+
Sbjct: 253 AAS 255
>gi|255545908|ref|XP_002514014.1| cyclin d, putative [Ricinus communis]
gi|223547100|gb|EEF48597.1| cyclin d, putative [Ricinus communis]
Length = 354
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPR 116
YL++NY DRF+S + LP+ + + L A CL IA K+ + F D G +
Sbjct: 121 YLSINYLDRFLSAYELPK---GKDWMMQLLAVACLSIAAKMEETEVPIFLDLQVGESRFV 177
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
++ MEL +L+ L WR +A+ +F+ FLN
Sbjct: 178 FEARTIQRMELLVLSTLSWRMKAITPFSFIDDFLN 212
>gi|225438825|ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
Length = 372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 26 YAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED 82
Y+ I FL R +A++ +L+ + +A LA+NYFDRF+S +
Sbjct: 83 YSGIISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQ 142
Query: 83 DLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVV 141
LAA CL +A K+ + D +K MEL +L+ L+W+ V
Sbjct: 143 ---LAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMNPVT 199
Query: 142 AVNFVPFFLNISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
++ FF +I G+K R+++ AD F PS +A A ++H+
Sbjct: 200 PIS---FFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHI 254
>gi|297724639|ref|NP_001174683.1| Os06g0236600 [Oryza sativa Japonica Group]
gi|255676869|dbj|BAH93411.1| Os06g0236600 [Oryza sativa Japonica Group]
Length = 347
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDF-MAGNNL- 114
YLA++Y DRF+S +LP+ G L +A CL +A K+ + S D + G
Sbjct: 147 YLAVSYMDRFMSSRSLPD-HGWASQLLCVA---CLSLAAKMEESSAPPLLDLQIEGTRFI 202
Query: 115 --PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR----HVNRIII 168
PR + MEL +L L+WR R+V FV FF + G R +II+
Sbjct: 203 FEPRTIQR----MELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRSSRILALRACQIIL 258
Query: 169 EAQADLSFAS-CKPSVIAAAALVHV 192
A +L F + C S+ AAA L V
Sbjct: 259 SAIHELEFLNHCASSMAAAAVLFAV 283
>gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Homo sapiens]
gi|180003|gb|AAA51927.1| D3-type cyclin [Homo sapiens]
gi|49457486|emb|CAG47042.1| CCND3 [Homo sapiens]
gi|119624476|gb|EAX04071.1| cyclin D3, isoform CRA_b [Homo sapiens]
gi|168278365|dbj|BAG11062.1| G1/S-specific cyclin-D3 [synthetic construct]
Length = 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ F L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|4502619|ref|NP_001751.1| G1/S-specific cyclin-D3 isoform 2 [Homo sapiens]
gi|20981685|sp|P30281.2|CCND3_HUMAN RecName: Full=G1/S-specific cyclin-D3
gi|181247|gb|AAA52137.1| cyclin D3 [Homo sapiens]
gi|15079591|gb|AAH11616.1| Cyclin D3 [Homo sapiens]
gi|123981690|gb|ABM82674.1| cyclin D3 [synthetic construct]
gi|123996909|gb|ABM86056.1| cyclin D3 [synthetic construct]
gi|189067872|dbj|BAG37810.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ F L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|432115461|gb|ELK36874.1| G1/S-specific cyclin-D2 [Myotis davidii]
Length = 289
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 26/251 (10%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFV-PFFLNI---SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ P + + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEPILRRLPQDNEKLPLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDSFCTMLDHMCCRKKMFQEIN 246
++ L +DE A E L T D D C K ++I
Sbjct: 205 GSVGAAVCGLQQDEEVSSLTADALVEMLAKITNTDVD-------------CLKACQEQIE 251
Query: 247 EEFLSDVGGFH 257
E +S++ F
Sbjct: 252 EVLISNLQQFQ 262
>gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic construct]
Length = 293
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ F L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|224081975|ref|XP_002306546.1| predicted protein [Populus trichocarpa]
gi|222855995|gb|EEE93542.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 47 SKSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF 103
+K N + P YL++NY DRF+S + LP+ GN + L CL +A K+ +
Sbjct: 101 AKVNAHFGFGPLCAYLSVNYLDRFLSAYELPK--GNAWM-MQLLGVACLSLAAKMEETEV 157
Query: 104 SFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
S D G + ++ MEL +L+ L+WR A+ +F+ +FL
Sbjct: 158 PLSLDLQVGESRFVFEARTIQRMELLVLSTLDWRMHAITPFSFIDYFLG 206
>gi|57900652|ref|NP_071603.1| G1/S-specific cyclin-D2 [Rattus norvegicus]
gi|416789|sp|Q04827.1|CCND2_RAT RecName: Full=G1/S-specific cyclin-D2; AltName: Full=Vin-1
proto-oncogene
gi|203704|gb|AAA41010.1| cyclin D2 [Rattus norvegicus]
Length = 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 21/225 (9%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AAL-VHVCKLLLRDENGERPDAKRC---RESLIDSTYVDEDSLDS 227
++ +C L + E +A C E L T+ D D L +
Sbjct: 204 GSVGAAICGL----QQDEEVNALTCDALTELLTKITHTDVDCLKA 244
>gi|427792433|gb|JAA61668.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYS 119
A+N FDR++S V + L L CL++A KLR D +A
Sbjct: 177 AMNLFDRYLS------VAVARKSQLQLLGCVCLLLATKLRQTRALPVDVLAYFTEDSVTV 230
Query: 120 KHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNRIIIEAQADLSF 176
+ ELQ+L+ L+W +VVA +FV L ++ RRH N I + F
Sbjct: 231 QDIQACELQVLDRLKWDVASVVANDFVDHLVTMLGLADCGDTVRRHANTFIALCATEYHF 290
Query: 177 ASCKPSVIA---AAALVH 191
S P+++A AA VH
Sbjct: 291 MSYSPALLATSSVAAAVH 308
>gi|159025709|emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]
Length = 319
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 47 SKSNKRNAYIP---YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF 103
+K N + P YL++NY DRF+S + LP+ GN + L CL +A K+ +
Sbjct: 101 AKVNAHFGFGPLCAYLSVNYLDRFLSAYELPK--GNAWM-MQLLGVACLSLAAKMEETEV 157
Query: 104 SFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
S D G + ++ MEL +L+ L+WR A+ +F+ +FL
Sbjct: 158 PLSLDLQVGESRFVFEARTIQRMELLVLSTLDWRMHAITPFSFIDYFLG 206
>gi|432862502|ref|XP_004069887.1| PREDICTED: G1/S-specific cyclin-D2-like [Oryzias latipes]
Length = 299
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 12 KYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI 68
+ +EE+ +P Y + + + F+R +L+ + K + LA+NY DRF+
Sbjct: 29 RLLTIEERFLPQYSYFKVVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFL 88
Query: 69 SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQ 128
+ V+ + +L L C+ +A KL++ ++ + + L EL
Sbjct: 89 A------VVPTKKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWELV 142
Query: 129 ILNGLEWRSRAVVAVNFVPFF---LNISSAK-GIKRRHVNRIIIEAQADLSFASCKPSVI 184
+L L+W AV +F+ L + K + R+HV I D FA PS+I
Sbjct: 143 VLGKLKWNLAAVTPNDFIEHIVRRLPLPEDKLALIRKHVQTFIALCATDFRFAMYPPSMI 202
Query: 185 AAAAL-VHVCKLLL 197
A ++ +C L L
Sbjct: 203 ATGSVGAAICGLQL 216
>gi|75289181|sp|Q67V81.1|CCD11_ORYSJ RecName: Full=Cyclin-D1-1; AltName: Full=G1/S-specific cyclin-D1-1;
Short=CycD1;1
gi|51535854|dbj|BAD37938.1| putative cyclin D1 [Oryza sativa Japonica Group]
gi|125554687|gb|EAZ00293.1| hypothetical protein OsI_22308 [Oryza sativa Indica Group]
gi|125596628|gb|EAZ36408.1| hypothetical protein OsJ_20738 [Oryza sativa Japonica Group]
Length = 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDF-MAGNNL- 114
YLA++Y DRF+S +LP+ G L +A CL +A K+ + S D + G
Sbjct: 147 YLAVSYMDRFMSSRSLPD-HGWASQLLCVA---CLSLAAKMEESSAPPLLDLQIEGTRFI 202
Query: 115 --PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR----HVNRIII 168
PR + MEL +L L+WR R+V FV FF + G R +II+
Sbjct: 203 FEPRTIQR----MELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRSSRILALRACQIIL 258
Query: 169 EAQADLSFAS-CKPSVIAAAALVHV 192
A +L F + C S+ AAA L V
Sbjct: 259 SAIHELEFLNHCASSMAAAAVLFAV 283
>gi|62089236|dbj|BAD93062.1| cyclin D3 variant [Homo sapiens]
Length = 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 76 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 123
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 124 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLA 183
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 184 LCATDYTFAMYPPSMIATGSI 204
>gi|159025738|emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]
Length = 156
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIEAQADLSFAS 178
ME+ IL L WR R++ +F+ FF+++ K +K R + II +AQ D++
Sbjct: 13 MEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKAR-ASEIIFKAQNDINLLE 71
Query: 179 CKPSVIAAAALVH 191
KPS+IAA+AL++
Sbjct: 72 FKPSLIAASALLY 84
>gi|427792431|gb|JAA61667.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYS 119
A+N FDR++S V + L L CL++A KLR D +A
Sbjct: 177 AMNLFDRYLS------VAVARKSQLQLLGCVCLLLATKLRQTRALPVDVLAYFTEDSVTV 230
Query: 120 KHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNRIIIEAQADLSF 176
+ ELQ+L+ L+W +VVA +FV L ++ RRH N I + F
Sbjct: 231 QDIQACELQVLDRLKWDVASVVANDFVDHLVTMLGLADCGDTVRRHANTFIALCATEYHF 290
Query: 177 ASCKPSVIA---AAALVH 191
S P+++A AA VH
Sbjct: 291 MSYSPALLATSSVAAAVH 308
>gi|147810960|emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
Length = 372
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 26 YAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED 82
Y+ I FL R +A++ +L+ + +A LA+NYFDRF+S +
Sbjct: 83 YSGIISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQ 142
Query: 83 DLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVV 141
LAA CL +A K+ + D +K MEL +L+ L+W+ V
Sbjct: 143 ---LAAVTCLSLAAKVDETDVPLLLDLQVEEXKYVFEAKTIQRMELLVLSSLQWKMNPVT 199
Query: 142 AVNFVPFFLNISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
++ FF +I G+K R+++ AD F PS +A A ++H+
Sbjct: 200 PIS---FFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHI 254
>gi|162463053|ref|NP_001105834.1| LOC732735 [Zea mays]
gi|78217447|gb|ABB36799.1| D-type cyclin [Zea mays]
Length = 355
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S + PE + L +A CL +A K+ + D
Sbjct: 122 LSVNYLDRFLSTYDFPEGRAWMTQLLAVA---CLSLASKIEETFVPLPLDLQVAEAKFVF 178
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEAQAD 173
+ MEL +L L+WR AV A +FV +FL+ S G + R + +++
Sbjct: 179 EGRTIKRMELLVLRTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSDLVLSTAKG 238
Query: 174 LSFASCKPSVIAAA 187
F +PS IAA+
Sbjct: 239 AEFVVFRPSEIAAS 252
>gi|348543722|ref|XP_003459332.1| PREDICTED: G1/S-specific cyclin-D1-like [Oreochromis niloticus]
Length = 292
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE +P+ Y + + P+ K++ L+ + K + LA+NY DRF+S
Sbjct: 35 EENYLPSPNYFKCVQKEIV-PKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS--- 90
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQ----SFSFSDFMAGNNLPRNYSKHALNMELQ 128
V + L L C+ +A K+++ + + + LP + L MEL
Sbjct: 91 ---VEATRKTRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNSVLP----EELLQMELL 143
Query: 129 ILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+LN L+W +V +F+ FL+ S K I R+H + D++F + PS+
Sbjct: 144 VLNKLKWDLASVTPHDFIEHFLSKLKIYPSTKQILRKHAQTFVALCATDVNFIASPPSM 202
>gi|355563899|gb|EHH20399.1| G1/S-specific cyclin-D2 [Macaca mulatta]
gi|355785816|gb|EHH65999.1| G1/S-specific cyclin-D2 [Macaca fascicularis]
gi|380786205|gb|AFE64978.1| G1/S-specific cyclin-D2 [Macaca mulatta]
gi|383422577|gb|AFH34502.1| G1/S-specific cyclin-D2 [Macaca mulatta]
gi|384939870|gb|AFI33540.1| G1/S-specific cyclin-D2 [Macaca mulatta]
gi|384939872|gb|AFI33541.1| G1/S-specific cyclin-D2 [Macaca mulatta]
Length = 289
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSVVRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|194707406|gb|ACF87787.1| unknown [Zea mays]
Length = 279
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR--------DQSFSFSDFM- 109
L++NY DRF+S + PE + L +A CL +A K+ D + + F+
Sbjct: 46 LSVNYLDRFLSTYDFPEGRAWMTQLLAVA---CLSLASKIEETFVPLPLDLQVAEAKFVF 102
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNR 165
G + R MEL +L L+WR AV A +FV +FL+ S G + R +
Sbjct: 103 EGRTIKR--------MELLVLRTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSD 154
Query: 166 IIIEAQADLSFASCKPSVIAAA 187
+++ F +PS IAA+
Sbjct: 155 LVLSTAKGAEFVVFRPSEIAAS 176
>gi|354467233|ref|XP_003496074.1| PREDICTED: G1/S-specific cyclin-D2-like [Cricetulus griseus]
gi|344242394|gb|EGV98497.1| G1/S-specific cyclin-D2 [Cricetulus griseus]
Length = 288
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T+ D D L +
Sbjct: 204 GSVGAAICGLQQDEEENTLTCDALTELLAKITHTDVDCLKA 244
>gi|61355683|gb|AAX41165.1| cyclin D2 [synthetic construct]
Length = 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIMPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|357489939|ref|XP_003615257.1| Cyclin d2 [Medicago truncatula]
gi|355516592|gb|AES98215.1| Cyclin d2 [Medicago truncatula]
Length = 352
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+ Y DRF+S + ++L + + L A CCL +A K+ + S M +
Sbjct: 110 YLAIRYMDRFLS---VVDMLKERKWSIQLLAFCCLYLAAKIDEVVVPRSVDMQMDEKKYL 166
Query: 118 YSKHAL-NMELQILNGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQA 172
+ K L EL IL+ L WR +A+ +++ FFLN + G R+I+
Sbjct: 167 FDKKTLRTTELLILSTLNWRMQAITPFSYIDFFLNKVNGDQVPIGDSILQSFRLIMSTVR 226
Query: 173 DLSFASCKPSVI 184
L F +PS I
Sbjct: 227 GLDFIQFRPSEI 238
>gi|326525028|dbj|BAK07784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 309
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
+ YLA NY DRF+SK LP L+ A CL IA K++ D++ +
Sbjct: 75 VAYLAQNYVDRFLSKGQLPFERKPWAPRLL--AISCLSIAAKMQRVDAISMDYIQRDEEF 132
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI--------SSAKGIKRRHVNRII 167
+ ME +L LEWR+R+V + F+ FFL+ + +K R V+ ++
Sbjct: 133 MFDAVTIRRMERVVLGALEWRARSVTPLAFLGFFLSACFPPPRHPALLDAVKERAVD-LL 191
Query: 168 IEAQADLSFASCKP 181
+ AQ ++ A P
Sbjct: 192 LRAQPEVKMAEFSP 205
>gi|449469807|ref|XP_004152610.1| PREDICTED: cyclin-D3-1-like [Cucumis sativus]
gi|449531374|ref|XP_004172661.1| PREDICTED: cyclin-D3-1-like [Cucumis sativus]
Length = 357
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
++ + E + +P GY + L R A+ I + S YLA+NY D
Sbjct: 67 LIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAVNYLD 126
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALN 124
RF+S + LP+ G + L A C+ +A KL + S D G + ++
Sbjct: 127 RFLSAYDLPK--GKAW-TMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIER 183
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN 151
MEL +L L WR +AV +F+ +L+
Sbjct: 184 MELLVLTTLGWRMQAVTPFSFIDHYLH 210
>gi|148910187|gb|ABR18175.1| unknown [Picea sitchensis]
Length = 368
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ IL+ L++NY DRF+S + L + + LAA CL +A
Sbjct: 89 RQDAVDWILKVHAHYGFGPVTAVLSINYLDRFLSANQLQQDKPWMTQ---LAAVACLSLA 145
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + DF S+ MEL +L+ LEWR V ++++ + S
Sbjct: 146 AKMDETEVPLLLDFQVEEAKYLFESRTIQRMELLVLSTLEWRMSPVTPLSYID---HASR 202
Query: 155 AKGIKRRHV-------NRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
G++ H I++ D F PSV+AAA ++HV K
Sbjct: 203 MIGLENHHCWIFTMRCKEILLNTLRDAKFLGFLPSVVAAAIMLHVIK 249
>gi|149049359|gb|EDM01813.1| cyclin D2, isoform CRA_d [Rattus norvegicus]
gi|149049360|gb|EDM01814.1| cyclin D2, isoform CRA_d [Rattus norvegicus]
gi|149049361|gb|EDM01815.1| cyclin D2, isoform CRA_d [Rattus norvegicus]
Length = 288
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 21/225 (9%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AAL-VHVCKLLLRDENGERPDAKRC---RESLIDSTYVDEDSLDS 227
++ +C L + E +A C E L T+ D D L +
Sbjct: 204 GSVGAAICGL----QQDEEVNALTCDALTELLAKITHTDVDCLKA 244
>gi|6753310|ref|NP_033959.1| G1/S-specific cyclin-D2 [Mus musculus]
gi|231742|sp|P30280.1|CCND2_MOUSE RecName: Full=G1/S-specific cyclin-D2
gi|192880|gb|AAA37503.1| cyclin 2 [Mus musculus]
gi|192939|gb|AAA37519.1| D-type cyclin [Mus musculus]
gi|29144987|gb|AAH49086.1| Cyclin D2 [Mus musculus]
gi|71059743|emb|CAJ18415.1| Ccnd2 [Mus musculus]
gi|74141419|dbj|BAE35987.1| unnamed protein product [Mus musculus]
gi|74181206|dbj|BAE27858.1| unnamed protein product [Mus musculus]
gi|74223254|dbj|BAE40760.1| unnamed protein product [Mus musculus]
gi|148667440|gb|EDK99856.1| cyclin D2 [Mus musculus]
Length = 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 17/223 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AAL-VHVCKLLLRDE-NGERPDAKRCRESLIDSTYVDEDSLDS 227
++ +C L DE N DA E L T+ D D L +
Sbjct: 204 GSVGAAICGLQQDDEVNTLTCDAL--TELLAKITHTDVDCLKA 244
>gi|147843360|emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
Length = 375
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YLA+NY DRF+S + LP+ + L +A CL +A K+ + D +
Sbjct: 121 YLAINYLDRFLSTYELPKGKAWMAQLLAVA---CLSLAAKMEENEVPLCLDLQVAESRFV 177
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
++ MEL +L L+WR +AV +FV +FL
Sbjct: 178 FEARTIQRMELLVLRTLKWRMQAVTPFSFVDYFL 211
>gi|427778041|gb|JAA54472.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 335
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYS 119
A+N FDR++S V + L L CL++A KLR D +A
Sbjct: 107 AMNLFDRYLS------VAVARKSQLQLLGCVCLLLATKLRQTRALPVDVLAYFTEDSVTV 160
Query: 120 KHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIKRRHVNRIIIEAQADLSF 176
+ ELQ+L+ L+W +VVA +FV L ++ RRH N I + F
Sbjct: 161 QDIQACELQVLDRLKWDVASVVANDFVDHLVTMLGLADCGDTVRRHANTFIALCATEYHF 220
Query: 177 ASCKPSVIA---AAALVH 191
S P+++A AA VH
Sbjct: 221 MSYSPALLATSSVAAAVH 238
>gi|410903163|ref|XP_003965063.1| PREDICTED: G1/S-specific cyclin-D3-like [Takifugu rubripes]
Length = 300
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 12 KYFDVEEKSMPAAGY-AYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+ VEE+ P+ Y + I + R K LQ + + LA++ DRF+S
Sbjct: 37 RLLHVEERYSPSVLYVSLIQQEPGRREELTKWTLQVCCDCGCDEAVFPLAVSLVDRFLSA 96
Query: 71 H-TLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
TLP + + LAA C ++IA KL + ++ + +ME I
Sbjct: 97 LLTLPV---SPVSPVCLAAGC-ILIASKLTECETVTAELLCAAAEHDFLPSSLRDMERLI 152
Query: 130 LNGLEWRSRAVVAVNFVPFFLNISSAKG---------IKRRHVNRIIIEAQADLSFASCK 180
L L W + AV +F+P FL +G RRH + + D F
Sbjct: 153 LATLRWDTAAVTPQDFLPHFLASLEERGGTFGTELLSTLRRHSDTLASMCVCDSQFLGTP 212
Query: 181 PSVIAAAAL 189
PS++AAA+L
Sbjct: 213 PSLVAAASL 221
>gi|449452098|ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
gi|449527605|ref|XP_004170800.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
Length = 335
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL++NY DRF+ LPE G L L + CL +A K+ + SF D
Sbjct: 98 YLSVNYLDRFLYSRRLPETNGW---PLQLLSVACLSLAAKMEEPIVPSFVDLQIEGAKYI 154
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVN----RIIIEAQA 172
+ MEL +L L WR R+V +F+ FF G +N II+
Sbjct: 155 FEPRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYKVDPTGTFSSFLNSRSTEIILSNTR 214
Query: 173 DLSFASCKPSVI 184
D +F PS I
Sbjct: 215 DATFLEYWPSCI 226
>gi|115479647|ref|NP_001063417.1| Os09g0466100 [Oryza sativa Japonica Group]
gi|147636734|sp|Q6YXH8.2|CCD41_ORYSJ RecName: Full=Cyclin-D4-1; AltName: Full=G1/S-specific cyclin-D4-1;
Short=CycD4;1
gi|18916916|dbj|BAB85522.1| cyclin [Oryza sativa Japonica Group]
gi|46806319|dbj|BAD17511.1| cyclin [Oryza sativa Japonica Group]
gi|113631650|dbj|BAF25331.1| Os09g0466100 [Oryza sativa Japonica Group]
gi|215686670|dbj|BAG88923.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 356
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LP+ + L +A CL +A K+ + S D G
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVA---CLSLAAKMEETDVPQSLDLQVGEERYVF 182
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
+K MEL +L+ L+WR +AV ++V +FL
Sbjct: 183 EAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFL 215
>gi|348575846|ref|XP_003473699.1| PREDICTED: hypothetical protein LOC100718785 [Cavia porcellus]
Length = 624
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 32 ANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCC 91
A PR + Q + + + LA+NY DR++S + + L L C
Sbjct: 385 ARLSGPRGRECYQQVCEEQRCEEEVFPLAMNYLDRYLS------CVPTRKAQLQLLGAVC 438
Query: 92 LIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN------MELQILNGLEWRSRAVVAVNF 145
+++A KLR+ + + + Y+ HA++ E+ +L L+W AV+A +F
Sbjct: 439 MLLASKLRETTPLTIEKLC------IYTDHAVSPRQMREWEVLVLGKLKWDLAAVIAHDF 492
Query: 146 VPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL 189
+ L+ S + + ++H + D +FA PS+IA ++
Sbjct: 493 LALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSI 540
>gi|302142033|emb|CBI19236.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YLA+NY DRF+S + LP+ + L +A CL +A K+ + D +
Sbjct: 121 YLAINYLDRFLSTYELPKGKAWMAQLLAVA---CLSLAAKMEENEVPLCLDLQVAESRFV 177
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
++ MEL +L L+WR +AV +FV +FL
Sbjct: 178 FEARTIQRMELLVLRTLKWRMQAVTPFSFVDYFL 211
>gi|125564038|gb|EAZ09418.1| hypothetical protein OsI_31691 [Oryza sativa Indica Group]
Length = 356
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LP+ + L +A CL +A K+ + S D G
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVA---CLSLAAKMEETDVPQSLDLQVGEERYVF 182
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
+K MEL +L+ L+WR +AV ++V +FL
Sbjct: 183 EAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFL 215
>gi|4502617|ref|NP_001750.1| G1/S-specific cyclin-D2 [Homo sapiens]
gi|114642905|ref|XP_001156857.1| PREDICTED: G1/S-specific cyclin-D2 [Pan troglodytes]
gi|397499290|ref|XP_003820389.1| PREDICTED: G1/S-specific cyclin-D2 [Pan paniscus]
gi|231741|sp|P30279.1|CCND2_HUMAN RecName: Full=G1/S-specific cyclin-D2
gi|21435963|gb|AAM54041.1|AF518005_1 cyclin D2 [Homo sapiens]
gi|38416|emb|CAA48493.1| cyclin D2 [Homo sapiens]
gi|180000|gb|AAA51926.1| D-type cyclin [Homo sapiens]
gi|285991|dbj|BAA02802.1| KIAK0002 [Homo sapiens]
gi|15012105|gb|AAH10958.1| Cyclin D2 [Homo sapiens]
gi|54696556|gb|AAV38650.1| cyclin D2 [Homo sapiens]
gi|58475990|gb|AAH89384.1| Cyclin D2 [Homo sapiens]
gi|60819613|gb|AAX36506.1| cyclin D2 [synthetic construct]
gi|61355692|gb|AAX41166.1| cyclin D2 [synthetic construct]
gi|61363151|gb|AAX42343.1| cyclin D2 [synthetic construct]
gi|61363383|gb|AAX42381.1| cyclin D2 [synthetic construct]
gi|119609257|gb|EAW88851.1| cyclin D2 [Homo sapiens]
gi|123986597|gb|ABM83771.1| cyclin D2 [synthetic construct]
gi|123999006|gb|ABM87090.1| cyclin D2 [synthetic construct]
gi|158255728|dbj|BAF83835.1| unnamed protein product [Homo sapiens]
gi|168278377|dbj|BAG11068.1| G1/S-specific cyclin-D2 [synthetic construct]
gi|410214660|gb|JAA04549.1| cyclin D2 [Pan troglodytes]
gi|410263554|gb|JAA19743.1| cyclin D2 [Pan troglodytes]
gi|410297426|gb|JAA27313.1| cyclin D2 [Pan troglodytes]
gi|410337345|gb|JAA37619.1| cyclin D2 [Pan troglodytes]
Length = 289
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|296211128|ref|XP_002752277.1| PREDICTED: G1/S-specific cyclin-D2 [Callithrix jacchus]
gi|403303212|ref|XP_003942237.1| PREDICTED: G1/S-specific cyclin-D2 [Saimiri boliviensis
boliviensis]
Length = 289
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|297690873|ref|XP_002822829.1| PREDICTED: G1/S-specific cyclin-D2 [Pongo abelii]
gi|402884819|ref|XP_003905870.1| PREDICTED: G1/S-specific cyclin-D2 [Papio anubis]
Length = 289
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|180010|gb|AAA51928.1| cyclin D2, partial [Homo sapiens]
Length = 240
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L N+ + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRNVPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AAL-VHVCKL 195
++ +C L
Sbjct: 205 GSVGAAICGL 214
>gi|426371271|ref|XP_004052572.1| PREDICTED: G1/S-specific cyclin-D2 [Gorilla gorilla gorilla]
gi|62898886|dbj|BAD97297.1| cyclin D2 variant [Homo sapiens]
Length = 289
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAICMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|61365653|gb|AAX42741.1| cyclin D2 [synthetic construct]
Length = 290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|54696554|gb|AAV38649.1| cyclin D2 [synthetic construct]
gi|60654185|gb|AAX29785.1| cyclin D2 [synthetic construct]
gi|60654249|gb|AAX29817.1| cyclin D2 [synthetic construct]
gi|60830964|gb|AAX36952.1| cyclin D2 [synthetic construct]
gi|61365646|gb|AAX42740.1| cyclin D2 [synthetic construct]
Length = 290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ S ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|359492924|ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
Length = 325
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 17 EEKSMPAAGYAY-INEANFLRPRAIKVILQNSKSNKRNAYIP---YLALNYFDRFISKHT 72
E + +PAA Y + + V+ +K++ + P YLA+NY DRF+S +
Sbjct: 76 ESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGPLCAYLAINYLDRFLSTYE 135
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILN 131
LP+ + L +A CL +A K+ + D + ++ MEL +L
Sbjct: 136 LPKGKAWMAQLLAVA---CLSLAAKMEENEVPLCLDLQVAESRFVFEARTIQRMELLVLR 192
Query: 132 GLEWRSRAVVAVNFVPFFL 150
L+WR +AV +FV +FL
Sbjct: 193 TLKWRMQAVTPFSFVDYFL 211
>gi|225716966|gb|ACO14329.1| G1/S-specific cyclin-D2 [Esox lucius]
Length = 300
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-- 68
++EE+ +P Y + + F+R +L+ + K + LA+NY DRF+
Sbjct: 31 LNIEERFIPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAV 90
Query: 69 --SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNME 126
+K ++LG V C+ +A KL++ ++ + + L+ E
Sbjct: 91 FPTKKCYLQLLGAV----------CMFLASKLKETRPLTAEKLCIYTDNSIRPQELLDWE 140
Query: 127 LQILNGLEWRSRAVVAVNFVPFF---LNISSAKGIK-RRHVNRIIIEAQADLSFASCKPS 182
L +L L+W AV +F+ L + K + R+HV I D +FA PS
Sbjct: 141 LVVLGKLKWNLAAVTPNDFIEHIVRKLPLPEEKLVLIRKHVQTFIALCATDFNFAMYPPS 200
Query: 183 VIAAAAL-VHVCKLLL 197
+IA ++ +C L L
Sbjct: 201 MIATGSVGAAICGLQL 216
>gi|356565485|ref|XP_003550970.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 319
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ YL+++YF+RF+ HTL + L L + CL +A
Sbjct: 85 REEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTLT---PDKAWPLQLLSVACLALA 141
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ ++ D + K MEL ++ L+WR R + +FV F+
Sbjct: 142 AKMEERKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFIAKLP 201
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
R V+ +II + F PS IAAAAL+ V
Sbjct: 202 CSASTWRDLSYIVSRVSDVIIRTCLVMDFLEFSPSTIAAAALLWV 246
>gi|356526858|ref|XP_003532033.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 360
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA+NY DRF+ LPE G L L + CL +A K+ + S D
Sbjct: 119 YLAVNYMDRFLDSSQLPETNGW---PLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYI 175
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEAQA 172
+ MEL +L L+WR R+V + F+ FF + + G R + II+
Sbjct: 176 FEPRTIRRMELLVLGVLDWRLRSVTPLCFLVFFACKADSTGTFTRFLISRATEIIVSNIQ 235
Query: 173 DLSFASCKPS 182
+ SF + +PS
Sbjct: 236 EASFLAYRPS 245
>gi|47216366|emb|CAG02424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ ++ L L C+ +A KL+D ++ +
Sbjct: 14 LAINYLDRFLA------VMPTRKNYLQLLGAVCIFLASKLKDCRPLSAEKLCMYTENSIT 67
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADL 174
S+ L+ EL +L L+W +V +FV + G+ R+H + D
Sbjct: 68 SRELLDWELVVLGKLKWNMASVTPNDFVEHIIRRLPLPKDKLGMVRKHTQTFVALCATDD 127
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLID 216
A PS+IA ++ VC L L +R DA+ R++L D
Sbjct: 128 RLAMNPPSMIATGSMGAAVCGLQL-----DRADARLSRDNLTD 165
>gi|25989347|gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
Length = 315
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIP 57
DF + +F+ + E K +P Y ++ L R ++ IL+ +
Sbjct: 38 DFDDSIAEFI---EQERKFVPGIDYVERFQSQVLDASAREESVAWILKVQRFYGFQPLTA 94
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL++NY DRFI P G L L + CL +A K+ + S D
Sbjct: 95 YLSVNYLDRFIYCRGFPVANGW---PLQLLSVACLSLAAKMEETLIPSILDLQVEGAKYI 151
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEAQA 172
K ME +L+ L+WR R+V +F+ FF + G+ + +II+
Sbjct: 152 FEPKTIRRMEFLVLSVLDWRLRSVTPFSFIGFFSHKIDPSGMYTGFLISRATQIILSNIQ 211
Query: 173 DLSFASCKPSVIAAAALV 190
+ S PS IAAA ++
Sbjct: 212 EASLLEYWPSCIAAATIL 229
>gi|302798593|ref|XP_002981056.1| hypothetical protein SELMODRAFT_420671 [Selaginella moellendorffii]
gi|300151110|gb|EFJ17757.1| hypothetical protein SELMODRAFT_420671 [Selaginella moellendorffii]
Length = 338
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 17 EEKSMPAAGY-AYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
E +P AGY A + + + R A+ +++ + LA+NYFDR++SK
Sbjct: 54 ESGHLPDAGYFAVLRSEDVISSARSNAVYWMMKVRNVYSFSPLTIALAVNYFDRYLSKQL 113
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY-SKHALNMELQILN 131
L + + L +A CL +A K+ + + L + SK ME+ ++
Sbjct: 114 LRTWKAWMIELLTVA---CLSLAAKMEEPDVPMLQDLQIEGLDHIFESKTIQRMEIAVMK 170
Query: 132 GLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAA 187
L WR +V +++ L N+ ++ +K +NR ++++ ++ F + PSV++ A
Sbjct: 171 LLGWRMGSVTPFSYIEGLLQNLDVSRNMKLSLLNRTSEVLVKTLPEMDFLAFPPSVVSLA 230
Query: 188 AL 189
A+
Sbjct: 231 AM 232
>gi|40539012|gb|AAR87269.1| putative cyclin [Oryza sativa Japonica Group]
Length = 358
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+NY DRF+S + ++ L++A CL +A K+ + + + + N
Sbjct: 126 YLAVNYLDRFLSSVEFSNDMPWMQQLLIVA---CLSLAAKMEETAAPGTLDLQVCNPEYV 182
Query: 118 YSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEAQA 172
+ ++ ME+ +L L+WR +AV ++ FL+ I+ I ++R II+
Sbjct: 183 FDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMK 242
Query: 173 DLSFASCKPSVIAAAALVHVCKLLLR--DENG---------ERPDAKRCRESLIDSTYVD 221
F +PS IA A + V R D G ++ + RC +++ + V
Sbjct: 243 ATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALVM 302
Query: 222 EDSLDSFCTMLDHMCCRKK 240
++S S +LD C K
Sbjct: 303 QNSTASPSGVLDTSCFTSK 321
>gi|125606002|gb|EAZ45038.1| hypothetical protein OsJ_29676 [Oryza sativa Japonica Group]
Length = 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S + LP+ + L +A CL +A K+ + S D G
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVA---CLSLAAKMEETDVPQSLDLQVGEERYVF 182
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
+K MEL +L+ L+WR +AV ++V +FL
Sbjct: 183 EAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFL 215
>gi|290563072|gb|ADD38930.1| G1/S-specific cyclin-D3 [Lepeophtheirus salmonis]
Length = 300
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-------QSFSFSDFMAG 111
LA+NY DRF+S T+ + L L CL+++WK+R+ + +SDF
Sbjct: 89 LAMNYLDRFLSVCTIS------KSQLQLLGAVCLLVSWKVREHRPLPASKLVEYSDF--- 139
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF------FLNISSAKGIKRRHVNR 165
NL + E+ +L+ L+W AV+A +F+ L++SS R+
Sbjct: 140 -NLTL---IDIMEWEVLLLSKLDWDMSAVIASDFLEHIVQRLTILDVSSNLVHIRQQAEA 195
Query: 166 IIIEAQADLSFASCKPSVIAAAALV 190
I+ + F+S PS+IA A ++
Sbjct: 196 RILLCSSHYEFSSINPSLIAIACVL 220
>gi|388520241|gb|AFK48182.1| unknown [Lotus japonicus]
Length = 217
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 84 LVLAANCCLIIAWKLRDQSFSFSDFM-AGNNLPRNYSKHALNMELQILNGLEWRSRAVVA 142
L LA L +A K+ + SFS AG N +++ MEL IL L WR R++
Sbjct: 39 LKLAVISSLSLASKMMNTPISFSIMQKAGCNFK---AENIQRMELIILGALNWRMRSITP 95
Query: 143 VNFVPFFLNIS-----SAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLL 197
F+ FF++++ S K + + II A D+ KPS IAA AL+ L+
Sbjct: 96 FPFLHFFISLAEIKDQSLKQALKERASEIIFNAHNDIKHLEYKPSTIAATALICASHELV 155
Query: 198 RDENGERPDAKRCRESLIDSTYVDEDSLDSFCTMLDHM 235
+ R S+ +VD+++L ++ M
Sbjct: 156 PQQYSV------LRASITACEHVDKETLSKCFDLMQEM 187
>gi|356497718|ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 361
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
LA+NY DRF+S LP V + L A CL IA K+ + S D G
Sbjct: 123 LAVNYLDRFLSVFDLPR---GVTWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVF 179
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVN---RIIIEAQAD 173
++ MEL +L+ L W+ A+ +F+ +FL I+ + + V+ ++I+
Sbjct: 180 EARTIQKMELLVLSTLGWKMCAITPCSFIDYFLGKITCEQHPAKSSVSISVQLILGIIMG 239
Query: 174 LSFASCKPSVIAAAALVHVCKLL 196
+ + +PS IAAA V V K L
Sbjct: 240 IDYLEFRPSEIAAAVAVSVLKEL 262
>gi|224067210|ref|XP_002302410.1| predicted protein [Populus trichocarpa]
gi|159025727|emb|CAN88864.1| D5-type cyclin [Populus trichocarpa]
gi|222844136|gb|EEE81683.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ K+ + + YL++ YFDRFIS ++ V + L + C+ +A
Sbjct: 77 RLEAITWILRTRKTFGFHFHTAYLSMIYFDRFISSRSIDRRYSWV---VKLISVACISLA 133
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF-LNIS 153
K+ + Q S +F + SK +EL IL+ L+WR F+ +F + S
Sbjct: 134 SKMEEVQVPSSPEFQTDGVIFE--SKSVKRVELGILSTLQWRMNYTTPFAFLRYFIMRFS 191
Query: 154 SAKGIKRRHVNRI---IIEAQADLSFASCKPSVIAAAA 188
R ++R I+ ++ S +PSVIAAAA
Sbjct: 192 RQDSPPRETISRTVRYILALMKEIHLMSHRPSVIAAAA 229
>gi|357517237|ref|XP_003628907.1| Cyclin D2 [Medicago truncatula]
gi|355522929|gb|AET03383.1| Cyclin D2 [Medicago truncatula]
Length = 374
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R AI+ + + + I LA+NY DRF+S + G++ + +LA CL I
Sbjct: 107 IRREAIEWMWKAAACYGFGPCIFSLAVNYVDRFLSVYKFER--GHLWSEKLLAL-ACLSI 163
Query: 95 AWKLRDQSF--SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN- 151
A KL + DF G + +K MEL IL+ L W ++ +FV +FL+
Sbjct: 164 AAKLEEGKKLPKSIDFKLGELVFVFETKGITTMELLILDHLNWEMQSSTPCSFVDYFLSK 223
Query: 152 ISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLL 196
I+S + G + +I++ + F KPS IAAA + V K L
Sbjct: 224 ITSEQQFPSGSSMLNSIDLILKMPKYIDFLEFKPSEIAAATAICVSKEL 272
>gi|6448484|emb|CAB61223.1| cyclin D3b [Antirrhinum majus]
Length = 361
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCC 91
+R IK +L+ NA LA+NY+DRFI+ +G +D LAA C
Sbjct: 102 VRNEGIKWMLKVIGHYGFNAMTAVLAVNYYDRFITN------VGFQKDKPWMSQLAAVAC 155
Query: 92 LIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF--- 148
L + + Q DF + +K MEL +L L+W+ V ++F
Sbjct: 156 LSVKVE-ETQVPLLLDFQVEESKYVFEAKTIQRMELLVLTTLKWKMNPVTPISFFDHIVR 214
Query: 149 ---FLNISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLL 196
+N + +KR +I+ D F PSV+AAA +++V K L
Sbjct: 215 RFELMNNVQCEFMKR--CESVILSIITDYRFVRYLPSVVAAATMIYVIKEL 263
>gi|221271524|dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]
Length = 344
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ +L+ + NA LA+NYFDRFIS + LAA C+ IA
Sbjct: 95 RNEAVDWMLKVIRHYGFNALTAVLAVNYFDRFISGVCFQRDKPWMSQ---LAAVACVSIA 151
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D +K MEL +L+ L+WR V ++F+ I
Sbjct: 152 AKVEEIQVPLLLDLQVAETKFLFEAKTIQRMELLVLSTLQWRMNLVTPISFIDHI--IRR 209
Query: 155 AKGIKRRH------VNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
K + H R+I+ AD PSV+A A + V K
Sbjct: 210 FKLMTNLHWEFLGLCERLILSVIADSRLLQYLPSVVATAIMFTVIK 255
>gi|119624481|gb|EAX04076.1| cyclin D3, isoform CRA_d [Homo sapiens]
Length = 242
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 77
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 78 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLA 137
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 138 LCATDYTFAMYPPSMIATGSI 158
>gi|365927270|gb|AEX07599.1| cyclin A3-2, partial [Brassica juncea]
Length = 246
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NYFDRFI++ + L A CL +A K+ + + +
Sbjct: 2 LAVNYFDRFIARVKFQTDKPWMSQ---LVAVACLSLAAKVEEIHVPLLIHLQVEEARYVF 58
Query: 119 -SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEAQAD 173
+K MEL +L+ L+WR V ++F + + ++ + R++I AD
Sbjct: 59 EAKTIQRMELLVLSTLQWRMHPVTPISFFDHIIRRLGSDCHQQLDLFGSCERLLISVVAD 118
Query: 174 LSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRE-----SLIDSTYVDEDSL-DS 227
F S PSV+A A ++HV K D K C + L+ V+++ + +
Sbjct: 119 TRFMSYIPSVLATAIMIHVIK-----------DLKPCEQVEYQSQLMTLLKVNQEKVNEC 167
Query: 228 FCTMLDHMCCRKKMFQEINEE 248
+ +L+H +K+M ++++
Sbjct: 168 YELLLEHKSSKKRMMNWLDQD 188
>gi|201066435|gb|ACH92568.1| cyclin D3 (predicted) [Otolemur garnettii]
Length = 292
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|184185441|gb|ACC68848.1| cyclin D3 (predicted) [Rhinolophus ferrumequinum]
Length = 292
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTHKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|255538192|ref|XP_002510161.1| cyclin d, putative [Ricinus communis]
gi|223550862|gb|EEF52348.1| cyclin d, putative [Ricinus communis]
Length = 378
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 48 KSNKRNAYIPY---LALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QS 102
K N ++ P LA+NY DRF+ S H E + LAA CL +A K+ + Q
Sbjct: 118 KVNAHYSFTPLTAVLAVNYLDRFLFSFHIQTEKPWMTQ----LAAVACLSLAAKVEETQV 173
Query: 103 FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-- 160
D ++ +K ME+ +L+ L+WR V ++F + ++ G+K
Sbjct: 174 PLLLDLQVEDSKYVFEAKTIQRMEILVLSTLQWRMNPVTPLSFFDY---VTRRLGLKNYI 230
Query: 161 -----RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRES-L 214
R I++ +D PSVIAAAA++HV N +P ES L
Sbjct: 231 CWEFLRRCELIVLSIISDTRCMRYLPSVIAAAAMLHVI-------NSIKPCLGAKFESQL 283
Query: 215 IDSTYVDEDSLDSFCTML 232
+ +D+D ++ CT+L
Sbjct: 284 LGILAIDKDKVND-CTIL 300
>gi|302801550|ref|XP_002982531.1| hypothetical protein SELMODRAFT_421971 [Selaginella moellendorffii]
gi|300149630|gb|EFJ16284.1| hypothetical protein SELMODRAFT_421971 [Selaginella moellendorffii]
Length = 338
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 17 EEKSMPAAGY-AYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
E +P AGY A + + + R A+ +++ + LA+NYFDR++SK
Sbjct: 54 ESGHLPDAGYFAVLRSEDVISSARSNAVYWMMKVRNVYSFSPLTIALAVNYFDRYLSKQL 113
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY-SKHALNMELQILN 131
L + + L +A CL +A K+ + + L + SK ME+ ++
Sbjct: 114 LRTWKAWMIELLTVA---CLSLAAKMEEPDVPMLQDLQIEGLDHIFESKTIQRMEIAVMK 170
Query: 132 GLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAA 187
L WR +V +++ L N+ ++ +K +NR ++++ ++ F + PSV++ A
Sbjct: 171 LLGWRMGSVTPFSYIEGLLQNLDVSRNMKLSLLNRTSEVLVKMLPEMDFLAFPPSVVSLA 230
Query: 188 AL 189
A+
Sbjct: 231 AM 232
>gi|395832347|ref|XP_003789233.1| PREDICTED: G1/S-specific cyclin-D3 [Otolemur garnettii]
Length = 292
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|33324661|gb|AAQ08041.1| cyclin D2 [Triticum aestivum]
Length = 353
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 15 DVEEKSMPAAGYAYIN-------EANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
+ E++ MPA GY + + +R AI I + + L++NY DRF
Sbjct: 72 ETEKEHMPADGYPQMLLRRPGALDLAAVRRDAIDWIWEVIEHFNFAPLTAVLSVNYLDRF 131
Query: 68 ISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSF-SDFMAGNNLPRNYSKHALNME 126
+S + LPE V L +A CL +A K+ + D + ME
Sbjct: 132 LSVYPLPEGKAWVTQLLAVA---CLSLASKMEETYVPLPVDLQVVEANSAFEGRTIKRME 188
Query: 127 LQILNGLEWRSRAVVAVNFVPFFL 150
L +L+ L+WR +AV A +F+ +FL
Sbjct: 189 LLVLSTLKWRMQAVTACSFIDYFL 212
>gi|224010117|ref|XP_002294016.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970033|gb|EED88371.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 337
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 56 IPYLALNYFDRFISKHTLPEVLG-NVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
I A + FDRF+SK +L L + + D L CLIIA K R SDF++
Sbjct: 77 IALSAASLFDRFMSKQSLRAGLAMHSKYDFQLIFITCLIIALKARAGMVVESDFVSATMC 136
Query: 115 PRNYSK-HALNMELQILNGLEWRSRAVVAVNFVPFFL-----NISSAKGIKRRHVNRIII 168
Y + ++ME++IL L WR F+ FL ++ S+K I +
Sbjct: 137 QGLYQQDEIVSMEMKILEVLGWRVNGPSIHEFIHLFLELLPDDVKSSKTIAMLTNSATAT 196
Query: 169 EAQADLSF--ASCKPSVIAAAALV 190
QA L + A PS IA A ++
Sbjct: 197 AEQATLDYPMALQAPSTIAMACIL 220
>gi|444725484|gb|ELW66048.1| G1/S-specific cyclin-D3 [Tupaia chinensis]
Length = 286
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFD 65
F +EE+ +P A Y + ++P K++ L+ + + + LA+NY D
Sbjct: 22 FPSLLRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLD 80
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYSKHAL- 123
R++S + + L L C+++A KLR+ + + + S H L
Sbjct: 81 RYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTD--HAVSPHQLR 132
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 133 DWEVLVLVKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 192
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 193 PPSMIATGSI 202
>gi|242046332|ref|XP_002461037.1| hypothetical protein SORBIDRAFT_02g039550 [Sorghum bicolor]
gi|241924414|gb|EER97558.1| hypothetical protein SORBIDRAFT_02g039550 [Sorghum bicolor]
Length = 345
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+NY DRF+S + LP ++ L +A CL +A K+ + F + ++
Sbjct: 109 YLAVNYLDRFLSLYELPHDKPWMQQLLSVA---CLSLAVKMEETVVPFPVDLQVCDVKFE 165
Query: 118 YSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN 151
+ + ME+ +L L+WR +AV F+ +FL+
Sbjct: 166 FEGKTIGRMEVLVLKTLKWRMQAVTPFTFISYFLD 200
>gi|255544363|ref|XP_002513243.1| cyclin d, putative [Ricinus communis]
gi|223547617|gb|EEF49111.1| cyclin d, putative [Ricinus communis]
Length = 144
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAK------GIKRRHVNRIIIEAQADLSFAS 178
ME IL L+WR R+V +F+ FF+++S K +K R + II++AQ D+
Sbjct: 1 MEELILGALKWRMRSVTPFSFISFFISLSKFKDPPLRQALKARAIE-IILKAQDDIRILK 59
Query: 179 CKPSVIAAAALVH 191
K SVIAA+AL++
Sbjct: 60 FKASVIAASALLN 72
>gi|27435851|gb|AAO13248.1|AF181993_1 cyclin D [Populus tremula x Populus tremuloides]
Length = 376
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ ++ A LA+NY DRF+ S H E + LAA CL +
Sbjct: 103 RCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQKEKPWMAQ----LAAVSCLSL 158
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q DF ++ +K ME+ +L+ L+W+ V ++F+ + I+
Sbjct: 159 AAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDY---IT 215
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPD 206
G++ + R+++ AD PSV+AAA +++V +N E
Sbjct: 216 RRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATMLYVI------DNIEPSL 269
Query: 207 AKRCRESLIDSTYVDEDSLD 226
A + L+ +D+D ++
Sbjct: 270 AAEYQSQLLSILGIDKDKVE 289
>gi|162956917|gb|ABY25837.1| D-type cyclin family 3 subgroup 3 [Solanum tuberosum]
Length = 332
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +++ IL+ + +A +LA+NYFDRF+ + + L + + LAA C +A
Sbjct: 76 RRESVEWILKTTAYYSFSAQTAFLAVNYFDRFL-LFSFNQSLKHKPWMIQLAAVTCPSLA 134
Query: 96 WKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + D + SK ME+ +L+ L+W+ V +F+ F I+
Sbjct: 135 AKVEETDVPLLLDLQVEESRFVFESKTIQRMEMLVLSTLKWKMNPVTPFSFLDF---ITR 191
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R ++++ D F PS +A+A ++HV
Sbjct: 192 RLGLKYCLSLEFLRRCEKVLLYTITDGRFIGYLPSAMASATMLHV 236
>gi|359359232|gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
Length = 353
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP + L +A CL +A K+ + S D G +
Sbjct: 118 YLSINYLDRFLSAYELPNGKPWMMQLLAVA---CLSLAAKMEETEVPLSLDLQVGESRFV 174
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
++ MEL +L+ L WR +A+ +F+ +FL+
Sbjct: 175 FEARTIQRMELLVLSTLSWRMQAITPFSFIDYFLS 209
>gi|22091622|emb|CAD43141.1| cyclin D2 [Daucus carota]
Length = 382
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 9 DFVKYFDVEEKSMPAAGYAYINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
DFV F+ + P ++ +R A+ I + A LA+NY D
Sbjct: 65 DFVFVFESKVNFCPEVIFSTDRSGELDLCVRKEALDWIYKAHAHYNFGALSVCLAVNYLD 124
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALN 124
RF+S + LP + + L A CL +A K+ + + + D + +K
Sbjct: 125 RFLSLYELP---SGKKWTVQLLAVACLSLAAKMEEVNVPLTVDLQVADPKFVFEAKTIKR 181
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHV----NRIIIEAQADLSFASC 179
MEL +L+ L+WR +A +F+ +FL I++A + + + I++ + F
Sbjct: 182 MELLVLSTLKWRMQACTPCSFIDYFLRKINNADALPSGSLIDRSIQFILKTMKGIDFLEF 241
Query: 180 KPSVIAAAALVHV 192
+PS I+AA + V
Sbjct: 242 RPSEISAAVAICV 254
>gi|350536333|ref|NP_001234753.1| CycD3;2 protein [Solanum lycopersicum]
gi|6434199|emb|CAB60837.1| CycD3;2 [Solanum lycopersicum]
Length = 364
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ + +A LA+NY DRF+S + + LAA CL +A
Sbjct: 98 RVDVVEWILKVNAHYDFSALTAILAINYLDRFLSSLQFQKDKPWMTQ---LAAVTCLSLA 154
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q DF + +K MEL +L+ L+WR V ++F+ +I
Sbjct: 155 AKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLD---HIIR 211
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R +++ D F PSV+A A ++HV
Sbjct: 212 RLGLKNNVHWEFLRRCESLLLSVMIDCRFVRYMPSVLATAIMLHV 256
>gi|388242712|gb|AFK15626.1| cyclin D2 [Eleutherodactylus coqui]
Length = 291
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 15/222 (6%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
VEE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTVEERYLPQCSYFKCVQKDIQPFMRKMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L K R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPLPKDKLLMVRKHAQTFIALCATDFNFALYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ +C L L D + E L T D D L +
Sbjct: 205 GSVGAAICGLQLDDAESDL-SGDSLTEHLAKITNTDVDCLKA 245
>gi|296087399|emb|CBI33773.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +A++ +L+ + +A LA+NYFDRF+S + LAA CL +A
Sbjct: 33 RTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQ---LAAVTCLSLA 89
Query: 96 WKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + D +K MEL +L+ L+W+ V ++ FF +I
Sbjct: 90 AKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMNPVTPIS---FFDHIIR 146
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R+++ AD F PS +A A ++H+
Sbjct: 147 RLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHI 191
>gi|404557420|gb|AFR79419.1| G1/S-specific cyclin-D1, partial [Trachemys scripta elegans]
Length = 241
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S L + + L L C+ +A K+++ ++ +
Sbjct: 29 LAMNYLDRFLSFEPLKK------NRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIR 82
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
L MEL ++N L+W A+ +F+ FL K I R+H + D+
Sbjct: 83 PDELLQMELFLVNKLKWNLAAMTPHDFIEHFLTKMPVAEDTKQIIRKHAQTFVALCATDV 142
Query: 175 SFASCKPSVIAAAALV 190
F S P +IAA ++V
Sbjct: 143 KFISNPPFMIAAGSVV 158
>gi|126340068|ref|XP_001365985.1| PREDICTED: g1/S-specific cyclin-D2-like [Monodelphis domestica]
Length = 290
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 16/226 (7%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
+ +EE+ +P Y + + ++R +L+ + K + LA+NY DR
Sbjct: 27 LLNLLTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDR 86
Query: 67 FISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNME 126
F++ P+ L L C+ +A KL++ ++ + + L E
Sbjct: 87 FLAGVPTPKC------RLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWE 140
Query: 127 LQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPS 182
L +L L+W AV +F+ L K R+H I D +FA PS
Sbjct: 141 LVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLLLIRKHAQTFIALCATDFNFAMYPPS 200
Query: 183 VIAAAAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
+IA ++ +C L L E+ ++ E L T D D L +
Sbjct: 201 MIATGSVGAAICGLQLDSEDNSL--SEHLTELLAKITNTDVDCLKA 244
>gi|159025707|emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]
Length = 361
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP + L +A CL +A K+ + S D G +
Sbjct: 130 YLSINYLDRFLSAYELPNGKPWMMQLLAVA---CLSLAAKMEETEVPLSLDLQVGESRFV 186
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
++ MEL +L+ L WR +A+ +F+ +FL+
Sbjct: 187 FEARTIQRMELLVLSTLSWRMQAITPFSFIDYFLS 221
>gi|388515489|gb|AFK45806.1| unknown [Lotus japonicus]
Length = 390
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 17 EEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHT 72
+EK Y +N FL R A+K +L+ + +A LA+ YFD F+ S H
Sbjct: 90 KEKIQHQNYYNDVNSDPFLSQPRHEAVKWMLKVNAHYGFSALTATLAVTYFDNFLLSFHF 149
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILN 131
E ++ LAA C+ +A K+ + Q D + +K L MEL +L+
Sbjct: 150 QSEKPWMIQ----LAAVTCISLAAKVEETQVPLLLDLQVQDAKFVFEAKTILKMELLVLS 205
Query: 132 GLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVI 184
L+W+ V ++F+ +I G+K R +++ D F PSV+
Sbjct: 206 TLKWKMHPVTPLSFLD---HIIRRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGVLPSVL 262
Query: 185 AAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLD 226
A A ++HV + E+ D ++ L+ +++ +D
Sbjct: 263 ATATMLHVI------DQIEKSDGVEYKKQLLGVLKINKGKVD 298
>gi|73997778|ref|XP_854586.1| PREDICTED: G1/S-specific cyclin-D2 [Canis lupus familiaris]
gi|301770155|ref|XP_002920492.1| PREDICTED: g1/S-specific cyclin-D2-like [Ailuropoda melanoleuca]
gi|410963559|ref|XP_003988332.1| PREDICTED: G1/S-specific cyclin-D2 [Felis catus]
gi|281353120|gb|EFB28704.1| hypothetical protein PANDA_009229 [Ailuropoda melanoleuca]
gi|355676260|gb|AER95742.1| cyclin D2 [Mustela putorius furo]
Length = 289
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L S + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE+ + L T D D L +
Sbjct: 205 GSVGAAICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKA 245
>gi|281183246|ref|NP_001162224.1| G1/S-specific cyclin-D3 [Papio anubis]
gi|388490082|ref|NP_001252916.1| G1/S-specific cyclin-D3 [Macaca mulatta]
gi|114607428|ref|XP_518470.2| PREDICTED: G1/S-specific cyclin-D3 isoform 3 [Pan troglodytes]
gi|297678115|ref|XP_002816925.1| PREDICTED: G1/S-specific cyclin-D3 [Pongo abelii]
gi|426353125|ref|XP_004044049.1| PREDICTED: G1/S-specific cyclin-D3 isoform 1 [Gorilla gorilla
gorilla]
gi|157939803|gb|ABW05542.1| cyclin D3 (predicted) [Papio anubis]
gi|355561691|gb|EHH18323.1| hypothetical protein EGK_14897 [Macaca mulatta]
gi|380787787|gb|AFE65769.1| G1/S-specific cyclin-D3 isoform 2 [Macaca mulatta]
gi|384950164|gb|AFI38687.1| G1/S-specific cyclin-D3 isoform 2 [Macaca mulatta]
gi|410227642|gb|JAA11040.1| cyclin D3 [Pan troglodytes]
gi|410248454|gb|JAA12194.1| cyclin D3 [Pan troglodytes]
gi|410294084|gb|JAA25642.1| cyclin D3 [Pan troglodytes]
gi|410338015|gb|JAA37954.1| cyclin D3 [Pan troglodytes]
Length = 292
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|115496822|ref|NP_001069840.1| G1/S-specific cyclin-D2 [Bos taurus]
gi|187937004|ref|NP_001120762.1| G1/S-specific cyclin-D2 [Ovis aries]
gi|122145325|sp|Q0P5D3.1|CCND2_BOVIN RecName: Full=G1/S-specific cyclin-D2
gi|112362091|gb|AAI20200.1| Cyclin D2 [Bos taurus]
gi|186886480|gb|ACC93616.1| Ccnd2 [Ovis aries]
gi|296487087|tpg|DAA29200.1| TPA: G1/S-specific cyclin-D2 [Bos taurus]
Length = 289
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L S + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE+ + L T D D L +
Sbjct: 205 GSVGAAICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKA 245
>gi|397526899|ref|XP_003833352.1| PREDICTED: G1/S-specific cyclin-D3 [Pan paniscus]
Length = 292
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|410929649|ref|XP_003978212.1| PREDICTED: G1/S-specific cyclin-D2-like [Takifugu rubripes]
Length = 296
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 13 YFDVEEKSMPAAGYAYINEAN-----FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
+EE+ +P Y+Y F+R +L+ + K + LA+NY DRF
Sbjct: 30 LLTIEERFLPQ--YSYFKGVQKDIQPFMRRMVATWMLEVCQEQKCEEEVFPLAMNYLDRF 87
Query: 68 ISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMEL 127
++ V+ + +L L C+ +A KL++ ++ + + L EL
Sbjct: 88 LA------VVPTKKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWEL 141
Query: 128 QILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+L L+W AV +F+ + + R+HV I D FA PS+
Sbjct: 142 VVLGKLKWNLAAVTPNDFIEHIMRRLPLPDDKLSLIRKHVQTFIALCATDFRFAMYPPSM 201
Query: 184 IAAAAL-VHVCKLLLRDEN 201
IA ++ +C L L N
Sbjct: 202 IATGSVGAAICGLQLDSTN 220
>gi|332234245|ref|XP_003266321.1| PREDICTED: G1/S-specific cyclin-D3 isoform 1 [Nomascus leucogenys]
Length = 292
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ HA+
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHAVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|350536431|ref|NP_001234758.1| CycD3;3 protein [Solanum lycopersicum]
gi|6434201|emb|CAB60838.1| CycD3;3 [Solanum lycopersicum]
Length = 336
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +++ IL+ + +A +LA+NYFDRF+ + + L + L A CL +A
Sbjct: 80 RRESVEWILKTTAYYSFSAQTGFLAVNYFDRFL-LFSFNQSLNHKPWMNQLVAVTCLSLA 138
Query: 96 WKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + D + SK ME+ IL+ L+W+ V +F+ F I+
Sbjct: 139 AKVEETDVPLLLDLQVEESGFLFESKTIQRMEMLILSTLKWKMNPVTPFSFLDF---ITR 195
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R ++++ D F PS +A+A ++HV
Sbjct: 196 RLGLKHCLSLEFLRRCEKVLLYTITDDRFIGYLPSAMASATMLHV 240
>gi|148230430|ref|NP_001089817.1| cyclin D2 [Xenopus laevis]
gi|76779695|gb|AAI06704.1| MGC132398 protein [Xenopus laevis]
Length = 291
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
VEE+ +P Y + + F+R +L+ + + + LA+NY DRF++
Sbjct: 31 LTVEERYLPHCSYFKCVQKDIQPFMRRMVATWMLEVCEEQRCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VIPTRKSHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L K R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPLPKDKLLLIRKHAQTFIALCATDFNFAMYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRD 199
++ +C L L D
Sbjct: 205 GSVGAAICGLQLDD 218
>gi|296090459|emb|CBI40278.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R +A++ +++ + +A LA+NY DRF+S L D + LAA CL
Sbjct: 96 RRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSS------LHFQRDKPWMIQLAAVTCL 149
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q D ++ +K MEL +L+ L+W+ V ++F+ +
Sbjct: 150 SLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLQWKMNPVTPLSFID---H 206
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G+K R R ++ AD F PSV+A A ++HV
Sbjct: 207 IIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATATMLHV 254
>gi|348519162|ref|XP_003447100.1| PREDICTED: G1/S-specific cyclin-D2-like [Oreochromis niloticus]
Length = 297
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 12 KYFDVEEKSMPAAGYAYINEAN-----FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
+ +EE+ +P Y+Y F+R +L+ + K + LA+NY DR
Sbjct: 29 RLLTIEERFLPQ--YSYFKGVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDR 86
Query: 67 FISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNME 126
F++ V+ + +L L C+ +A KL++ ++ + + L E
Sbjct: 87 FLA------VVPTKKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWE 140
Query: 127 LQILNGLEWRSRAVVAVNFVPFF---LNISSAK-GIKRRHVNRIIIEAQADLSFASCKPS 182
L +L L+W AV +F+ L + K + R+HV I D FA PS
Sbjct: 141 LVVLGKLKWNLAAVTPNDFIEHIVRRLPLPEDKLALIRKHVQTFIALCATDFRFAMYPPS 200
Query: 183 VIAAAAL-VHVCKLLL 197
+IA ++ +C L L
Sbjct: 201 MIATGSVGAAICGLQL 216
>gi|410918709|ref|XP_003972827.1| PREDICTED: G1/S-specific cyclin-D2-like [Takifugu rubripes]
Length = 294
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ ++ L L C+ +A KL+D ++ +
Sbjct: 79 LAINYLDRFLA------VMPTRKNYLQLLGAVCIFLASKLKDCRPLSAEKLCMYTENSIT 132
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADL 174
S+ L+ EL +L L+W +V +FV + G+ R+H + D
Sbjct: 133 SRELLDWELVVLGKLKWNMASVTPNDFVEHIIRRLPLPKDKLGMVRKHTQTFVALCATDD 192
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLID 216
A PS+IA ++ VC L L +R D + R++L D
Sbjct: 193 RLAMNPPSMIATGSMGAAVCGLQL-----DRADERLGRDNLTD 230
>gi|219887455|gb|ACL54102.1| unknown [Zea mays]
gi|414869943|tpg|DAA48500.1| TPA: D-type cyclin [Zea mays]
Length = 388
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ I + ++ YLA+NY DRF+S +P+ + L +A C+ +
Sbjct: 91 VRREAVDWIWKAYTHHRFRPLTAYLAVNYLDRFLSLSEVPDCKDWMTQLLAVA---CVSL 147
Query: 95 AWKLRD----QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
A K+ + Q + G+ +K MEL +L L WR AV ++V +FL
Sbjct: 148 AAKMEETAVPQCLDLQEV--GDARYVFEAKTVQRMELLVLTTLNWRMHAVTPFSYVDYFL 205
Query: 151 N 151
N
Sbjct: 206 N 206
>gi|296198149|ref|XP_002746582.1| PREDICTED: G1/S-specific cyclin-D3 [Callithrix jacchus]
Length = 292
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 80 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 127
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
S HAL + E+ +L L+W AV+A +F+ L+ + + ++H +
Sbjct: 128 SDHALSPRQMRDWEVLVLGKLKWDLAAVIAHDFLALILHRLPVPRERQALVKKHAQTFLA 187
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 188 LCATDYTFAMYPPSMIATGSI 208
>gi|417409393|gb|JAA51203.1| Putative g1/s-specific cyclin d, partial [Desmodus rotundus]
Length = 291
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 33 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 92
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 93 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 146
Query: 131 NGLEWRSRAVVAVNFV-PFFLNI---SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ P + S + R+H I D FA PS+IA
Sbjct: 147 GKLKWNLAAVTPHDFIEPILRRLPQPSEKLPLIRKHAQTFIALCATDFKFAMYPPSMIAT 206
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 207 GSVGAAICGLQQDEEVSSLTGDALVELLAKITNTDVDCLKA 247
>gi|225428885|ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
Length = 386
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 17 EEKSMPAAGYAYINEA-NFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE 75
E+++ AG ++ A R +A++ +++ + +A LA+NY DRF+S
Sbjct: 88 EQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSS----- 142
Query: 76 VLGNVEDD---LVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILN 131
L D + LAA CL +A K+ + Q D ++ +K MEL +L+
Sbjct: 143 -LHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLS 201
Query: 132 GLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVI 184
L+W+ V ++F+ +I G+K R R ++ AD F PSV+
Sbjct: 202 TLQWKMNPVTPLSFID---HIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVL 258
Query: 185 AAAALVHV 192
A A ++HV
Sbjct: 259 ATATMLHV 266
>gi|403261265|ref|XP_003923045.1| PREDICTED: G1/S-specific cyclin-D3 [Saimiri boliviensis
boliviensis]
Length = 292
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 80 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 127
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
S HAL + E+ +L L+W AV+A +F+ L+ + + ++H +
Sbjct: 128 SDHALSPRQMRDWEVLVLGKLKWDLAAVIAHDFLALILHRLPVPRERQALVKKHAQTFLA 187
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 188 LCATDYTFAMYPPSMIATGSI 208
>gi|357465337|ref|XP_003602950.1| Cyclin d2 [Medicago truncatula]
gi|355491998|gb|AES73201.1| Cyclin d2 [Medicago truncatula]
Length = 362
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + P+ + L A CL +A K+ + + D G +
Sbjct: 119 YLSINYMDRFLSVYEFPKGRAWT---MQLLAVACLSLAAKVEETAVPQPLDLQIGESKFV 175
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-----NISSAKGIKRRHVNRIIIEAQ 171
+K MEL +L+ L+WR +A+ +F+ FL + S+ ++I
Sbjct: 176 FEAKTIQRMELLVLSTLKWRMQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTI 235
Query: 172 ADLSFASCKPSVIAAAALVHV 192
L F KPS IAAA V
Sbjct: 236 KGLDFLEFKPSEIAAAVATCV 256
>gi|351696898|gb|EHA99816.1| G1/S-specific cyclin-D2 [Heterocephalus glaber]
Length = 288
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQREKLPLIRKHTQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 204 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 244
>gi|225714286|gb|ACO12989.1| G1/S-specific cyclin-D3 [Lepeophtheirus salmonis]
Length = 300
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-------QSFSFSDFMAG 111
LA+NY DRF+S T+ + L L CL+++WK+R+ + +SDF
Sbjct: 89 LAMNYLDRFLSVCTIS------KSQLQLLRAVCLLVSWKVREHRPLPASKLVEYSDF--- 139
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF------FLNISSAKGIKRRHVNR 165
NL + E+ +L+ L+W AV+A +F+ L++SS R+
Sbjct: 140 -NLTL---IDIMEWEVLLLSKLDWDMSAVIASDFLEHIVQRLTILDVSSNLVHIRQQAEA 195
Query: 166 IIIEAQADLSFASCKPSVIAAAALV 190
I+ + F+S PS+IA A ++
Sbjct: 196 RILLCSSHYEFSSINPSLIAIACVL 220
>gi|357121946|ref|XP_003562677.1| PREDICTED: cyclin-D2-2-like [Brachypodium distachyon]
Length = 338
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSF-SDFMAGNNLPRN 117
L++NY DRF+ LP ++ + +A CL +A K+ + D +
Sbjct: 110 LSVNYLDRFLDSFNLPLDKSWMQQLMSVA---CLSVAVKMEETVVPLLVDLQVCDPKCEF 166
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEAQAD 173
+++ MEL ++ L+WR +AV +F+ +FL+ + K +R +I++ D
Sbjct: 167 EARNIKRMELLVMETLKWRMQAVTPFSFMCYFLDKFNEGKPPSYMLASRCAELIVDTVKD 226
Query: 174 LSFASCKPSVIAAAALV 190
SF S +PS IAAA ++
Sbjct: 227 FSFLSFRPSEIAAAVVL 243
>gi|224097248|ref|XP_002310892.1| predicted protein [Populus trichocarpa]
gi|159025705|emb|CAN88853.1| D1-type cyclin [Populus trichocarpa]
gi|222853795|gb|EEE91342.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL+ NYF FI HTL + G L L A CL +A KL + S D PR
Sbjct: 101 YLSANYFHCFILSHTLQKGKGW---PLQLLAVACLSVAAKLEETRVPSLLDIQTLE--PR 155
Query: 117 NYSKHAL--NMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADL 174
K + MEL ++ L+WR + +F+ +F I+ + R N +I+ +DL
Sbjct: 156 FLFKPSTVRRMELLVMGSLKWRLHIITPFSFLHYF--IAKLSHLSPRSKN-LILAHSSDL 212
Query: 175 SFASCK--------PSVIAAAALVHV 192
++C+ PS IAAAA++ V
Sbjct: 213 IISTCRVMNILAYTPSTIAAAAVLWV 238
>gi|348555004|ref|XP_003463314.1| PREDICTED: G1/S-specific cyclin-D2-like [Cavia porcellus]
Length = 288
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 204 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 244
>gi|218192970|gb|EEC75397.1| hypothetical protein OsI_11885 [Oryza sativa Indica Group]
Length = 473
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 58 YLALNYFDRFIS--KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
YLA+NY DRF+S + ++ + ++ L++A CL +A K+ + + + + N
Sbjct: 126 YLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVA---CLSLAAKMEETAAPGTLDLQVCNPE 182
Query: 116 RNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEA 170
+ K ++ ME+ +L L+WR +AV ++ FL+ I+ I ++R II+
Sbjct: 183 YVFDKETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILST 242
Query: 171 QADLSFASCKPSVIAAAALVHV 192
F +PS IA A + V
Sbjct: 243 MKATVFLRFRPSEIATAVALSV 264
>gi|158300277|ref|XP_551892.3| AGAP012299-PA [Anopheles gambiae str. PEST]
gi|157013081|gb|EAL38702.3| AGAP012299-PA [Anopheles gambiae str. PEST]
Length = 323
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 6 VAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
V P+ ++ +E ++P Y ++ ++P K++ K LA+N+FD
Sbjct: 40 VLPNLIR---LERYTIPPCNY-FVAVQQDIKPAMRKIVTTWMLEQKCEEQTFPLAVNFFD 95
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL-- 123
RF+ + L L C L++A K+R D ++ Y+ HA+
Sbjct: 96 RFLCALAIDRY------HLQLLGCCTLLLASKIRQCQPLTVDVLSA------YTDHAVSP 143
Query: 124 ----NMELQILNGLEWRSRAVVAVNFVPFFL---NISSAKGIKRRHVNRIIIEAQADLSF 176
N EL +++ LEW AV A ++V L S R H + +I + F
Sbjct: 144 DQIRNWELLLISKLEWNINAVTAYDYVDHILERVKWGSDDARLREHAHTLIHVCNTETIF 203
Query: 177 ASCKPSVIAAAAL 189
+PS++A + +
Sbjct: 204 MQVEPSLLAVSCI 216
>gi|291396194|ref|XP_002714720.1| PREDICTED: cyclin D3 [Oryctolagus cuniculus]
Length = 273
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 61 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 108
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIII 168
+ HA+ + E +L L+W AVVA +F+ L+ S + + ++H +
Sbjct: 109 TDHAVSPRQLRDWEALVLGKLKWDLAAVVAHDFLALILHRLSLPSDRQALVKKHAQTFLA 168
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 169 LCATDYTFAMYPPSMIATGSI 189
>gi|326504854|dbj|BAK06718.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 20/101 (19%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD---------QSFSFSDFM 109
L++NY DRF+S + LPE V L +A CL +A K+ + Q +
Sbjct: 19 LSVNYLDRFLSVYPLPEGKAWVTQLLAVA---CLSLASKMEETYMPLPVDLQVVEANSAF 75
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
G + R MEL +L+ L+WR +AV A +F+ +FL
Sbjct: 76 EGRTIKR--------MELLVLSTLKWRMQAVTACSFIDYFL 108
>gi|15235254|ref|NP_195142.1| cyclin-D3-1 [Arabidopsis thaliana]
gi|59802919|sp|P42753.3|CCD31_ARATH RecName: Full=Cyclin-D3-1; AltName: Full=Cyclin-delta-3;
Short=Cyclin-d3; AltName: Full=G1/S-specific
cyclin-D3-1; Short=CycD3;1
gi|2911046|emb|CAA17556.1| cyclin delta-3 [Arabidopsis thaliana]
gi|7270365|emb|CAB80133.1| cyclin delta-3 [Arabidopsis thaliana]
gi|62320771|dbj|BAD95437.1| cyclin delta-3 [Arabidopsis thaliana]
gi|332660935|gb|AEE86335.1| cyclin-D3-1 [Arabidopsis thaliana]
Length = 376
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 26/197 (13%)
Query: 9 DFVKYFDVEE-KSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
D V F EE + + Y++ R A+ IL+ + + LA+ Y D+F
Sbjct: 62 DLVTLFSKEEEQGLSCLDDVYLSTD---RKEAVGWILRVNAHYGFSTLAAVLAITYLDKF 118
Query: 68 ISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHA 122
I ++L P +L L + CL +A K+ + Q DF +K
Sbjct: 119 ICSYSLQRDKPWMLQ-------LVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTI 171
Query: 123 LNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLS 175
MEL IL+ LEW+ + ++FV +I G+K +R+++ +D
Sbjct: 172 QRMELLILSTLEWKMHLITPISFVD---HIIRRLGLKNNAHWDFLNKCHRLLLSVISDSR 228
Query: 176 FASCKPSVIAAAALVHV 192
F PSV+AAA ++ +
Sbjct: 229 FVGYLPSVVAAATMMRI 245
>gi|224136828|ref|XP_002326955.1| predicted protein [Populus trichocarpa]
gi|159025711|emb|CAN88856.1| D3-type cyclin [Populus trichocarpa]
gi|222835270|gb|EEE73705.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ ++ A LA+NY DRF+ S H E + LAA CL +
Sbjct: 106 RCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQKEKPWMAQ----LAAVSCLSL 161
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q DF ++ +K ME+ +L+ L+W+ V ++F+ + I+
Sbjct: 162 AAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDY---IT 218
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPD 206
G++ + R+++ AD PSV+AAA +++V +N E
Sbjct: 219 RRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATMLYVI------DNIEPSL 272
Query: 207 AKRCRESLIDSTYVDEDSLD 226
A + L+ +D+D ++
Sbjct: 273 AAEYQSQLLSILGIDKDKVE 292
>gi|126309863|ref|XP_001370590.1| PREDICTED: g1/S-specific cyclin-D3-like [Monodelphis domestica]
Length = 292
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + L+P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-LKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYSKHAL-NMEL 127
+ + L L C+++A KLR+ + + + + + H L + E+
Sbjct: 91 ------CVPTRKCHLQLLGAVCMLLASKLRETTPLTMEKLCIYTD--HSVTPHQLRDWEV 142
Query: 128 QILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASCKPSV 183
+L L+W AV+A +F+ L+ + + ++H + D +FA PS+
Sbjct: 143 IVLGRLKWDLAAVIAHDFLALILHRLPVPMDRRALVKKHAQTFLALCATDYTFAMYPPSM 202
Query: 184 IAAAAL 189
IA ++
Sbjct: 203 IATGSI 208
>gi|2995134|emb|CAA58287.1| cyclin delta-3 [Arabidopsis thaliana]
Length = 376
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 26/197 (13%)
Query: 9 DFVKYFDVEE-KSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
D V F EE + + Y++ R A+ IL+ + + LA+ Y D+F
Sbjct: 62 DLVTLFSKEEEQGLSCLDDVYLSTD---RKEAVGWILRVNAHYGFSTLAAVLAITYLDKF 118
Query: 68 ISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHA 122
I ++L P +L L + CL +A K+ + Q DF +K
Sbjct: 119 ICSYSLQRDKPWMLQ-------LVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTI 171
Query: 123 LNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLS 175
MEL IL+ LEW+ + ++FV +I G+K +R+++ +D
Sbjct: 172 QRMELLILSTLEWKMHLITPISFVD---HIIRRLGLKNNAHWDFLNKCHRLLLSVISDSR 228
Query: 176 FASCKPSVIAAAALVHV 192
F PSV+AAA ++ +
Sbjct: 229 FVGYLPSVVAAATMMRI 245
>gi|239047282|ref|NP_001141798.2| hypothetical protein [Zea mays]
gi|238908959|gb|ACF87065.2| unknown [Zea mays]
gi|414887631|tpg|DAA63645.1| TPA: hypothetical protein ZEAMMB73_540866 [Zea mays]
Length = 345
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
YLA+NY DRF+S + LP + L +A CL +A K+ + + ++
Sbjct: 108 YLAVNYLDRFLSSYDLPHDKPWMRQLLSVA---CLALAVKMEETVLPLPVDLQVCDVKFE 164
Query: 118 YSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEAQA 172
+ + MEL +L L+WR +AV F+ +FL+ + K +R III
Sbjct: 165 FEARTIGRMELLVLATLKWRMQAVTPFTFISYFLDKFNGGKPPSLALASRCTDIIIGTLK 224
Query: 173 DLSFASCKPSVI 184
+F S +PS I
Sbjct: 225 GSTFLSFRPSEI 236
>gi|440902476|gb|ELR53268.1| G1/S-specific cyclin-D3, partial [Bos grunniens mutus]
Length = 287
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 27 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 85
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 86 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 133
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 134 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 193
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 194 PPSMIATGSI 203
>gi|78217445|gb|ABB36798.1| D-type cyclin [Cynodon dactylon]
Length = 255
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR--------DQSFSFSDFM- 109
L++NY DRF+S + PE + L +A CL +A K+ D + + F+
Sbjct: 21 LSVNYLDRFLSTYEFPEGQAWMTQLLAVA---CLSLASKVEETFVPLPLDLQVAEAKFVF 77
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNR 165
G + R MEL +L+ L+WR +AV A +F+ +FL+ + G + R
Sbjct: 78 EGRTIKR--------MELLVLSTLKWRMQAVTACSFIDYFLHKLNDHGAPSMLARSRAAD 129
Query: 166 IIIEAQADLSFASCKPSVIAAA 187
+I+ F +P+ IAA+
Sbjct: 130 LILSTAKGAEFLVFRPTEIAAS 151
>gi|356566036|ref|XP_003551241.1| PREDICTED: cyclin-D4-1-like [Glycine max]
Length = 358
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRN 117
L++NY DRF+S + LP + L A CL IA K+ + F D G
Sbjct: 122 LSVNYLDRFLSVYELPR---GKSWSIQLLAVACLSIAAKMEEIKVPPFVDLQVGEPKFVF 178
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNRI---IIEAQAD 173
+K MEL +L+ L W+ +A +F+ +FL I+ + I + + R I+
Sbjct: 179 EAKTIQRMELLVLSTLRWQMQASTPFSFLDYFLRKINCDQVIVKSSIMRSVGPILNIIKC 238
Query: 174 LSFASCKPSVIAAAALVHVCK 194
++F +PS IAAA + V +
Sbjct: 239 INFLEFRPSEIAAAVAISVSR 259
>gi|326516928|dbj|BAJ96456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 32/149 (21%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR-------------DQSFSF 105
L++NY DRF+S LP ++ + +A CL +A K+ D S+ F
Sbjct: 109 LSVNYMDRFLSSFDLPHDKSWMQQLMSVA---CLSLAVKMEETVAPLPVDLQVCDASYEF 165
Query: 106 SDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVN 164
PRN + MEL ++ L+WR +V +F+ +FL+ + K V+
Sbjct: 166 E--------PRNIKR----MELIVMETLKWRMHSVTPFSFLCYFLDKFNQGKPPSYMLVS 213
Query: 165 R---IIIEAQADLSFASCKPSVIAAAALV 190
R +I+ D F S +PS IAAA ++
Sbjct: 214 RCAELIVATVKDYRFLSFRPSEIAAAVVL 242
>gi|148231179|ref|NP_001082914.1| G1/S-specific cyclin-D2 [Danio rerio]
gi|126631726|gb|AAI33932.1| Zgc:162280 protein [Danio rerio]
gi|257124412|gb|ACV41906.1| cyclin D2A [Danio rerio]
Length = 298
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERFLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + +L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VVPTRKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ + + R+HV I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPNDFIEHIMRKLPLPEDKLELIRKHVQTFIALCATDFNFAMYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRDEN 201
++ +C L L N
Sbjct: 205 GSVAAAICGLQLNSTN 220
>gi|359359234|gb|AEV41135.1| D3-type cyclin [Populus x canadensis]
Length = 379
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ ++ A LA+NY DRF+ S H E + LAA CL +
Sbjct: 106 RCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQKEKPWMAQ----LAAVSCLSL 161
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q DF ++ +K ME+ +L+ L+W+ V ++F+ + I+
Sbjct: 162 AAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDY---IT 218
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G++ + R+++ AD PSV+AAA +++V
Sbjct: 219 RRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATMLYV 264
>gi|45383698|ref|NP_989544.1| G1/S-specific cyclin-D2 [Gallus gallus]
gi|1705784|sp|P49706.1|CCND2_CHICK RecName: Full=G1/S-specific cyclin-D2
gi|968969|gb|AAA96955.1| cyclin D2 [Gallus gallus]
gi|1586561|prf||2204258A cyclin D
Length = 291
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VVPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPLPKDKLVLIRKHAQTFIALCATDFNFAMYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRDENGER 204
++ +C L L D G+R
Sbjct: 205 GSVGAAICGLQLDD--GDR 221
>gi|213513059|ref|NP_001133987.1| G1/S-specific cyclin-D2 [Salmo salar]
gi|209156070|gb|ACI34267.1| G1/S-specific cyclin-D2 [Salmo salar]
Length = 296
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 59 LALNYFDRFI----SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
LA+NY DRF+ ++ ++LG V C+ +A KL++ ++ +
Sbjct: 78 LAINYLDRFLAVEPTRKCYLQLLGAV----------CMFLATKLKESRPLTAEKLCMYTD 127
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN---ISSAK-GIKRRHVNRIIIEA 170
+ L EL +L L+W AV+ +FV L+ + K + R+H I
Sbjct: 128 NSITPRELLEWELVVLGKLKWNMAAVIPNDFVDHILHRLPLPKEKLSVVRKHTQTFIALC 187
Query: 171 QADLSFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
D SFA PS+IA ++ VC L L D++ + R + L T + D L +
Sbjct: 188 ATDFSFAMNPPSMIATGSVGAAVCGLQL-DQSDQALSRDRLTDLLAKITNTEVDCLKA 244
>gi|444509049|gb|ELV09167.1| G1/S-specific cyclin-D2 [Tupaia chinensis]
Length = 289
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LSIEERYLPQCSYFKCVQKDLQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPPQREKMSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L DE E L T D D L +
Sbjct: 205 GSVGAAICGLQHDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|356514431|ref|XP_003525909.1| PREDICTED: cyclin-D3-2-like [Glycine max]
Length = 362
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 33 NFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV-LAANCC 91
+F R A++ +L+ + +A L++NYFDRF+ N + +V LAA C
Sbjct: 77 DFARREAVEWMLKVNSHYSFSALTAVLSVNYFDRFLFSFR----FQNDKPWMVQLAAVAC 132
Query: 92 LIIAWKLRDQSFSFSDFMAGNNLPRNY--SKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
L IA K+ + F + + R +K ME+ +L+ L W+ ++F+ +F
Sbjct: 133 LSIAAKVEETHVPFLIDLQQVDESRYLFEAKTIKKMEILVLSTLGWKMNPPTPLSFLDYF 192
Query: 150 L-NISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAAALVHVCK 194
+ S + +++ +++ D F S PSV+A A ++HV K
Sbjct: 193 TRRLGSKDHLCWEFLSKSQGVLLSLLGDSRFMSYLPSVLATATMMHVVK 241
>gi|1770190|emb|CAA71244.1| cyclin-D like protein [Chenopodium rubrum]
Length = 372
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP ++ L CL +A K+ + D +
Sbjct: 131 YLSVNYLDRFLSAYELPGKAWMMQ----LLGVACLSLAAKVDETDVPLILDLQVSESKFV 186
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEAQA 172
+K MEL +L+ L+WR ++V +F+ +FL S + + + ++I+
Sbjct: 187 FEAKTIQRMELLVLSTLKWRMQSVTPFSFIDYFLYKLSGDKMPSKSLIFQAIQLILSTIK 246
Query: 173 DLSFASCKPSVIAAAALVHVCK 194
+ +PS IAAA + V +
Sbjct: 247 GIDLMEFRPSEIAAAVAISVTQ 268
>gi|345778759|ref|XP_864857.2| PREDICTED: G1/S-specific cyclin-D3 isoform 2 [Canis lupus
familiaris]
Length = 292
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPQDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|225424764|ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
gi|296086502|emb|CBI32091.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ + YL++NY DRF+ LP+ G L L + CL +A
Sbjct: 72 REESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNGW---PLQLLSVACLSLA 128
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL---- 150
K+ + S D SK MEL +L L+WR R++ +F+ FF
Sbjct: 129 AKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGFFAYKLD 188
Query: 151 NISSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
+ S G +II+ + SF PS
Sbjct: 189 SSGSVIGFLISRATQIILSNIQEASFLEYWPS 220
>gi|77736363|ref|NP_001029881.1| G1/S-specific cyclin-D3 [Bos taurus]
gi|115312216|sp|Q3MHH5.1|CCND3_BOVIN RecName: Full=G1/S-specific cyclin-D3
gi|75773685|gb|AAI05237.1| Cyclin D3 [Bos taurus]
Length = 292
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|193786248|dbj|BAG51531.1| unnamed protein product [Homo sapiens]
Length = 242
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 77
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 78 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLA 137
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +F PS+IA ++
Sbjct: 138 LCATDYTFVMYPPSMIATGSI 158
>gi|356567601|ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 348
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YLA+NY DRF+ LPE G L L + CL +A K+ + S D
Sbjct: 112 YLAVNYMDRFLDSRRLPETNGW---PLQLVSVACLSLAAKMEEPLVPSLLDLQIEGAKYI 168
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFF-LNISSAKGIKRRHVNR---IIIEAQA 172
+ MEL +L L+WR R+V + F+ FF + S R ++R II+
Sbjct: 169 FEPRTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFIRFLISRATEIIVSNIQ 228
Query: 173 DLSFASCKPS 182
+ SF + PS
Sbjct: 229 EASFLAYWPS 238
>gi|296474442|tpg|DAA16557.1| TPA: G1/S-specific cyclin-D3 [Bos taurus]
Length = 292
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|187937002|ref|NP_001120761.1| G1/S-specific cyclin-D3 [Ovis aries]
gi|186886482|gb|ACC93617.1| Ccnd3 [Ovis aries]
Length = 292
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|395847637|ref|XP_003796474.1| PREDICTED: G1/S-specific cyclin-D2 [Otolemur garnettii]
Length = 289
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 205 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 245
>gi|384253817|gb|EIE27291.1| cyclin-like protein [Coccomyxa subellipsoidea C-169]
Length = 288
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 43 ILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS 102
++ + + A+ LA+N DRF++ H + G + L LAA CL IA K+ +
Sbjct: 47 MMTAAACHNFGAFTCTLAVNLLDRFMAAHRASD--GELWT-LQLAAVACLSIAAKMEEGV 103
Query: 103 FSFSDFMAGNNLPRNY---SKHALNMELQILNGLEWRSRAVVAVNFVPFF---------L 150
F + + +P ++H +MEL +L LEWR AV A +F+ L
Sbjct: 104 FPDNIALFQVAIPWEQPFEARHIKSMELVVLATLEWRVAAVTAASFLDRLLLGAFDAATL 163
Query: 151 NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDE 200
+ SA R ++ + + +PS +AAA+++ ++ D+
Sbjct: 164 DDPSALHAARTKSMGLLARTLPEERYLDFRPSTVAAASILVAMRMYCTDQ 213
>gi|224034135|gb|ACN36143.1| unknown [Zea mays]
Length = 322
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ I + ++ YLA+NY DRF+S +P+ + L +A C+ +
Sbjct: 91 VRREAVDWIWKAYTHHRFRPLTAYLAVNYLDRFLSLSEVPDCKDWMTQLLAVA---CVSL 147
Query: 95 AWKLRD----QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
A K+ + Q + G+ +K MEL +L L WR AV ++V +FL
Sbjct: 148 AAKMEETAVPQCLDLQEV--GDARYVFEAKTVQRMELLVLTTLNWRMHAVTPFSYVDYFL 205
Query: 151 N 151
N
Sbjct: 206 N 206
>gi|255567883|ref|XP_002524919.1| cyclin d, putative [Ricinus communis]
gi|223535754|gb|EEF37416.1| cyclin d, putative [Ricinus communis]
Length = 276
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE---VLGNVEDDLVLAANCCL 92
R A+ +++ A LA+NYFDRF+ P +G LAA CL
Sbjct: 4 RKEAVDWVMRVKAHYGFTALTSVLAVNYFDRFVLSLKFPNDKPWMGQ------LAAVACL 57
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q D +K MEL L+ L+WR + ++F F +
Sbjct: 58 SLAAKVEETQVPLLLDLQVEEAKYVFEAKTIKRMELLALSTLQWRMNPITPISF---FDH 114
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
I G+K R +++ +D F S PSV+A A ++HV K
Sbjct: 115 IIRRLGLKNHLHWEFLRRCESLLLSVISDSRFMSYLPSVLATAIMLHVIK 164
>gi|118486770|gb|ABK95220.1| unknown [Populus trichocarpa]
Length = 379
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ ++ A LA+NY DRF+ S H E + LAA CL +
Sbjct: 106 RCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQKEKPWMAQ----LAAVSCLSL 161
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q DF ++ +K ME+ +L+ L+W+ V ++F+ + I+
Sbjct: 162 AAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDY---IT 218
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPD 206
G++ + R+++ AD PSV+AAA +++ +N E
Sbjct: 219 RRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATMLY------GIDNIEPSL 272
Query: 207 AKRCRESLIDSTYVDEDSLD 226
A + L+ S +D+D ++
Sbjct: 273 AAEYQSQLLSSLGIDKDKVE 292
>gi|291392683|ref|XP_002712876.1| PREDICTED: cyclin D2 [Oryctolagus cuniculus]
Length = 288
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHPQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T D D L +
Sbjct: 204 GSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKA 244
>gi|357485601|ref|XP_003613088.1| Cyclin D2 [Medicago truncatula]
gi|355514423|gb|AES96046.1| Cyclin D2 [Medicago truncatula]
Length = 346
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S P V + L A C +A K+ + S D G
Sbjct: 115 LSVNYLDRFLSVFQFPR---GVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVF 171
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRHVNR---IIIEAQAD 173
+K MEL IL+ L W+ RA+ +F+ +FL IS K + + R +I+
Sbjct: 172 QAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKG 231
Query: 174 LSFASCKPSVIAAAALVHVCKL 195
+ F + S IAAA + + +L
Sbjct: 232 IDFLEFRSSEIAAAVAISLKEL 253
>gi|27362900|gb|AAN87006.1| cyclin D [Populus alba]
Length = 289
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ ++ A LA+NY DRF+ S H E + LAA CL +
Sbjct: 74 RCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQKEKPWMAQ----LAAVSCLSL 129
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q DF ++ +K ME+ +L+ L+W+ V ++F+ + I+
Sbjct: 130 AAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDY---IT 186
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G++ + R+++ AD PSV+AAA +++V
Sbjct: 187 RRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATMLYV 232
>gi|356511976|ref|XP_003524697.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 318
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ YL+++YF+RF+ HT + + L L + CL +A
Sbjct: 85 REEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTFTQ---DKAWPLQLLSVTCLSLA 141
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN--I 152
K+ + D + K MEL ++ L+WR R + +FV F++ +
Sbjct: 142 AKMEESKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFISKLL 201
Query: 153 SSAK-----GIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
SA V+ +II + F PS IAAAAL+ V
Sbjct: 202 CSASTWGDLSYIVSLVSDVIIRTCLVMDFLEFSPSTIAAAALLWV 246
>gi|180016|gb|AAA51929.1| cyclin D3, partial [Homo sapiens]
Length = 186
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRN 117
LA+NY DR++S + + L L C+++A KLR+ + +
Sbjct: 29 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI------- 75
Query: 118 YSKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRII 167
Y+ HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 76 YTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFL 135
Query: 168 IEAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 136 ALCATDYTFAMYPPSMIATGSI 157
>gi|332824049|ref|XP_003311337.1| PREDICTED: G1/S-specific cyclin-D3 isoform 1 [Pan troglodytes]
Length = 242
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 77
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 78 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLA 137
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 138 LCATDYTFAMYPPSMIATGSI 158
>gi|426353127|ref|XP_004044050.1| PREDICTED: G1/S-specific cyclin-D3 isoform 2 [Gorilla gorilla
gorilla]
Length = 242
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 77
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 78 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLA 137
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 138 LCATDYTFAMYPPSMIATGSI 158
>gi|25989349|gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]
Length = 357
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCCL 92
R A+ IL+ LA+NY DRF+S L ED + L A CL
Sbjct: 93 RKEAVDWILKVKSCYGFTPLTAILAINYLDRFLSS------LHFQEDKPWMIQLVAVSCL 146
Query: 93 IIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + Q D + +K+ MEL +++ L+WR V ++F+ +
Sbjct: 147 SLAAKVEETQVPLLLDLQVEDTKYLFEAKNIQKMELLVMSTLKWRMNPVTPISFLD---H 203
Query: 152 ISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
I G+ + +I+ +D F KPSV+A A ++HV
Sbjct: 204 IVRRLGLTDHVHWDFFKKCEAMILCLVSDSRFVCYKPSVLATATMLHV 251
>gi|356563576|ref|XP_003550037.1| PREDICTED: cyclin-D3-2-like [Glycine max]
Length = 371
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 53 NAYIPYLALNYFDRFISKHTLPEVLGNVEDD----LVLAANCCLIIAWKLRDQSFSFS-D 107
+A LA+NYFDRFI+ ++D L A CL +A K + D
Sbjct: 112 SALTTVLAVNYFDRFITSLKF-------QNDKPWMTQLTAVACLSLAVKTEETHVPLLLD 164
Query: 108 FMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR------ 161
+ +K MEL +L+ L+WR V ++F F +I G+K R
Sbjct: 165 LQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISF---FEHIVRRLGLKSRLHWEFL 221
Query: 162 -HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
R+++ AD S PS +AAA ++ V K
Sbjct: 222 WRCERVLLNVIADSRVMSYLPSTLAAATMIRVIK 255
>gi|317760624|ref|NP_001187525.1| g1/s-specific cyclin-d2 [Ictalurus punctatus]
gi|308323249|gb|ADO28761.1| g1/s-specific cyclin-d2 [Ictalurus punctatus]
Length = 298
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 13 YFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 30 LLTIEERFLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA 89
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
V+ + +L L C+ +A KL++ ++ + + L EL +
Sbjct: 90 ------VMPTRKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWELVV 143
Query: 130 LNGLEWRSRAVVAVNFVPFF---LNISSAK-GIKRRHVNRIIIEAQADLSFASCKPSVIA 185
L L+W AV +F+ L + K + R+HV I + +FA PS+IA
Sbjct: 144 LGKLKWNLAAVTPNDFIEHIVKRLPLPEDKLDLIRKHVQTFIALCATEFNFAMHPPSMIA 203
Query: 186 AAAL-VHVCKLLLRDEN 201
++ +C L L N
Sbjct: 204 TGSVGAAICGLQLNSTN 220
>gi|308321560|gb|ADO27931.1| g1/s-specific cyclin-d2 [Ictalurus furcatus]
Length = 298
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 13 YFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 30 LLTIEERFLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA 89
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
V+ + +L L C+ +A KL++ ++ + + L EL +
Sbjct: 90 ------VMPTRKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWELVV 143
Query: 130 LNGLEWRSRAVVAVNFVPFF---LNISSAK-GIKRRHVNRIIIEAQADLSFASCKPSVIA 185
L L+W AV +F+ L + K + R+HV I + +FA PS+IA
Sbjct: 144 LGKLKWNLAAVTPNDFIEHIVKRLPLPEDKLDLIRKHVQTFIALCATEFNFAMHPPSMIA 203
Query: 186 AAAL-VHVCKLLLRDEN 201
++ +C L L N
Sbjct: 204 TGSVGAAICGLQLNSTN 220
>gi|344250708|gb|EGW06812.1| G1/S-specific cyclin-D3 [Cricetulus griseus]
Length = 353
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 93 LRLEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLS 151
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 152 ------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLR 199
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 200 EWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQSLVKKHAQTFLALCATDYTFAMY 259
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 260 PPSMIATGSI 269
>gi|301757408|ref|XP_002914533.1| PREDICTED: g1/S-specific cyclin-D3-like [Ailuropoda melanoleuca]
gi|281345744|gb|EFB21328.1| hypothetical protein PANDA_002453 [Ailuropoda melanoleuca]
Length = 292
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|47211756|emb|CAG06237.1| unnamed protein product [Tetraodon nigroviridis]
Length = 292
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFD 65
+ EE +P+ Y + L P+ K++ L+ + K + LA+NY D
Sbjct: 28 LLTMLKAEEHYLPSPNYFKCVQKEIL-PKMRKIVATWMLEVCEEQKCEEAVFPLAMNYLD 86
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNM 125
RF+S V + L L C+ +A K+++ ++ + L M
Sbjct: 87 RFLS------VEATRKTRLQLLGAACMFLASKMKETVPLSAEKLCIYTDNSVRLGELLQM 140
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKP 181
EL +L+ L+W +V +F+ FL+ S K + R+H + D++F + P
Sbjct: 141 ELLVLSKLKWDLASVTPHDFIEHFLSKLRIFPSTKHVLRKHAQTFVALCATDVNFIASPP 200
Query: 182 SVIA 185
S++A
Sbjct: 201 SMVA 204
>gi|225429023|ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera]
gi|296083031|emb|CBI22435.3| unnamed protein product [Vitis vinifera]
Length = 354
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 36 RPRAIKVILQNSKSN---KRNAYIPY------LALNYFDRFISKHTLPEVLGNVEDDLVL 86
R R++ V + N K +AY + L++NY DRF+S+H LP+ G L +
Sbjct: 77 RDRSVDVTSRQDSINWILKVHAYYHFRPVTAILSVNYLDRFLSRHALPQGNGWPFQLLSV 136
Query: 87 AANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNF 145
A CL +A K+ + D K MEL ++ L WR R+V +F
Sbjct: 137 A---CLSLAAKMEETHVPLLLDLQMFQTKFVFEPKTIQRMELWVMANLNWRLRSVTPFDF 193
Query: 146 VPFFLNISSAKGIKRRHVNRIIIEAQADL 174
+ +F + R + + ADL
Sbjct: 194 IDYFASKLPCSSASRHDLLTRVFSVSADL 222
>gi|332234247|ref|XP_003266322.1| PREDICTED: G1/S-specific cyclin-D3 isoform 2 [Nomascus leucogenys]
Length = 242
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRN 117
LA+NY DR++S + + L L C+++A KLR+ + +
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI------- 76
Query: 118 YSKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRII 167
Y+ HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 77 YTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFL 136
Query: 168 IEAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 137 ALCATDYTFAMYPPSMIATGSI 158
>gi|255645898|gb|ACU23438.1| unknown [Glycine max]
Length = 371
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 53 NAYIPYLALNYFDRFISKHTLPEVLGNVEDD----LVLAANCCLIIAWKLRDQSFSFS-D 107
+A LA+NYFDRFI+ ++D L A CL +A K + D
Sbjct: 112 SALTTVLAVNYFDRFITSLKF-------QNDKPWMTQLTAVACLSLAVKTEETHVPLLLD 164
Query: 108 FMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR------ 161
+ +K MEL +L+ L+WR V ++F F +I G+K R
Sbjct: 165 LQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISF---FEHIVRRLGLKSRLHWEFL 221
Query: 162 -HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
R+++ AD S PS +AAA ++ V K
Sbjct: 222 WRCERVLLNVIADSRVMSYLPSTLAAATMIRVIK 255
>gi|255568629|ref|XP_002525288.1| cyclin d, putative [Ricinus communis]
gi|223535446|gb|EEF37116.1| cyclin d, putative [Ricinus communis]
Length = 306
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL-PR 116
YL++NY DRF+S H+LP+ G + L A CL +A KL + + + L PR
Sbjct: 100 YLSVNYLDRFLSFHSLPQGKGW---PMQLLAVACLSVAAKLEETNVPL--LLELQILEPR 154
Query: 117 NYSKHAL--NMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRI-------I 167
K + MEL ++ L+WR + F+ +F+ S + + + I
Sbjct: 155 FLFKPSTIQRMELLVMAKLKWRLHIITPFYFLHYFIAKLSCASPDCNNFSSVFPRSSDLI 214
Query: 168 IEAQADLSFASCKPSVIAAAALVHVC-------KLLLRDENGERPDAKRC 210
I ++F PS +AA+A++ V KL E R KRC
Sbjct: 215 INICRVINFLDYTPSAVAASAVLWVTNQTVDDPKLECLHEKVNRDKVKRC 264
>gi|391326751|ref|XP_003737875.1| PREDICTED: G1/S-specific cyclin-D2-like [Metaseiulus occidentalis]
Length = 320
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYS 119
A + DRF+SK + ++ L L CL++A K+R + + + +YS
Sbjct: 95 ATSLMDRFLSK------ISVHKNHLQLLGTVCLLLASKMR---LTRPLTVEKLRMYTDYS 145
Query: 120 ---KHALNMELQILNGLEWRSRAVVA-------VNFVPFFLNISSAKGIKRRHVNRIIIE 169
K L E+ +L+ L+W++ V A ++ +P K R+ +I
Sbjct: 146 VSRKEILEWEMLVLSKLDWQTSLVTANDMLDHLIHQLPLDSQHQRQKETLRKQAQTVIAL 205
Query: 170 AQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVD----EDSL 225
A + F+ PSV AAA+++ +LR ++ D R + + V+ +S+
Sbjct: 206 AATEFDFSQFSPSVTAAASMIVASAYVLRISRRQKSDLMRWVHQAVRADEVELKTCTESI 265
Query: 226 DSFCT 230
D F T
Sbjct: 266 DEFIT 270
>gi|355748558|gb|EHH53041.1| hypothetical protein EGM_13599, partial [Macaca fascicularis]
Length = 227
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 15 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 62
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 63 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLA 122
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 123 LCATDYTFAMYPPSMIATGSI 143
>gi|90078112|dbj|BAE88736.1| unnamed protein product [Macaca fascicularis]
Length = 237
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 25 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 72
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 73 TDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLA 132
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 133 LCATDYTFAMYPPSMIATGSI 153
>gi|4583990|emb|CAB40540.1| cyclin D3 [Medicago sativa]
Length = 378
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 29 INEANFLRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLV 85
IN + +PR A++ +L+ + +A LA+NY DRF+ S H E ++
Sbjct: 93 INFDSLSQPRREAVEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQ---- 148
Query: 86 LAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVN 144
L A C+ +A K+ + Q D + +K MEL IL+ L+W+ V +
Sbjct: 149 LVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHS 208
Query: 145 FVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
F+ +I G+K R +++ D F C PSV+A A ++HV
Sbjct: 209 FLD---HIIRRLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHV 260
>gi|21745138|gb|AAM77273.1|AF519810_1 cyclin D3.1 protein [Lagenaria siceraria]
Length = 352
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ +L+ + +A LA++Y DRF+S + LAA C+ +A
Sbjct: 85 RRSAVGWMLKVNAHYSFSALTAVLAVDYLDRFLSCFHFQRDKPWMSQ---LAAVACISLA 141
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D ++ +K MEL +L+ L+WR V +FV + IS
Sbjct: 142 AKVEETQVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDY---ISR 198
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDA 207
G K R I+ + F S PSV+A A ++HV K + E P
Sbjct: 199 RLGFKEHICWEILWQCERTILSVILESDFMSFLPSVMATATMLHVFKAM------EEPTL 252
Query: 208 KRCRES-LIDSTYVDEDSLDSFCTMLDH 234
+S L++ +D+ +++ C ++ +
Sbjct: 253 SVEYDSQLLNILGIDKGNVEECCKLISN 280
>gi|357486085|ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula]
gi|355514665|gb|AES96288.1| Cyclin-D1-1 [Medicago truncatula]
Length = 334
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +I+ IL+ YLA+NY DRF++ LP+ G L L + CL +A
Sbjct: 77 RDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGW---PLQLLSVACLSLA 133
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL---- 150
K+ + S D MEL +L+ L+WR R+V +F+ FF
Sbjct: 134 AKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLD 193
Query: 151 NISSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
+ S+ G +II+ + S + PS
Sbjct: 194 STSTFTGFLISRATQIILSKIQEASILAYWPS 225
>gi|47522986|ref|NP_999253.1| G1/S-specific cyclin-D2 [Sus scrofa]
gi|75066003|sp|Q8WNW2.1|CCND2_PIG RecName: Full=G1/S-specific cyclin-D2
gi|18147003|dbj|BAB82986.1| cyclin D2 [Sus scrofa]
Length = 288
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 14/190 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQPNEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AAL-VHVCKL 195
++ +C L
Sbjct: 205 GSVGAAICGL 214
>gi|344277779|ref|XP_003410675.1| PREDICTED: G1/S-specific cyclin-D2-like [Loxodonta africana]
Length = 289
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 91 VPTPK------SHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + R+H I D FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPQPREKLPLIRKHAQTFIALCATDFKFAMYPPSMIAT 204
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE+ + L T D D L +
Sbjct: 205 GSVGAAICGLQQDEDVSSLTGDALTDLLAKITNTDVDCLKA 245
>gi|224096131|ref|XP_002196045.1| PREDICTED: G1/S-specific cyclin-D2 [Taeniopygia guttata]
Length = 285
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VVPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAKG---IKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKVPLPKDKLLLIRKHAQTFIALCATDFNFAMYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRD 199
++ +C L L D
Sbjct: 205 GSVGAAICGLQLDD 218
>gi|74197181|dbj|BAE35136.1| unnamed protein product [Mus musculus]
Length = 292
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQKE-IKPHMRKMLTYWMLEVCEEQRCEEDVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 91 ------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 EWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|357116363|ref|XP_003559951.1| PREDICTED: cyclin-D2-2-like [Brachypodium distachyon]
Length = 325
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI I + +N L++NY DRF++ + E + +A CL +A
Sbjct: 75 RKDAIDWICKVHSNNNFGPLSLCLSVNYLDRFLASFNPLHDKSSTEKFIAVA---CLSLA 131
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-IS 153
K+ + DF + SK+ MEL +L+ L+WR RAV +F+ +FL+ +
Sbjct: 132 VKMEETIAVLPIDFQVFDANYEFGSKNIKMMELLVLDTLKWRMRAVTPFSFMRYFLDKFN 191
Query: 154 SAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAAALV 190
K +R +I+ D F S +PS IAA ++
Sbjct: 192 EGKAPTYTIASRCAELIVNTVKDSRFVSFRPSEIAATMVL 231
>gi|354487860|ref|XP_003506089.1| PREDICTED: G1/S-specific cyclin-D3-like [Cricetulus griseus]
Length = 292
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 91 ------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 EWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQSLVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|147767172|emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]
Length = 334
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S+H LP+ G L +A CL +A K+ + D
Sbjct: 109 LSVNYLDRFLSRHALPQGNGWPFQLLSVA---CLSLAAKMEETHVPLLLDLQMFQTKFVF 165
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADL 174
K MEL ++ L WR R+V +F+ +F + R + + ADL
Sbjct: 166 EPKTIQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADL 222
>gi|6724313|ref|NP_031658.1| G1/S-specific cyclin-D3 [Mus musculus]
gi|126012504|ref|NP_001075104.1| G1/S-specific cyclin-D3 [Mus musculus]
gi|126012533|ref|NP_001075105.1| G1/S-specific cyclin-D3 [Mus musculus]
gi|231744|sp|P30282.1|CCND3_MOUSE RecName: Full=G1/S-specific cyclin-D3
gi|192882|gb|AAA37504.1| cyclin 3 [Mus musculus]
gi|1730281|gb|AAC53363.1| cyclin D3 [Mus musculus]
gi|13542808|gb|AAH05605.1| Cyclin D3 [Mus musculus]
gi|55249693|gb|AAH85763.1| Cyclin D3 [Rattus norvegicus]
gi|58476444|gb|AAH89819.1| Ccnd3 protein [Rattus norvegicus]
gi|74180055|dbj|BAE36561.1| unnamed protein product [Mus musculus]
gi|74212146|dbj|BAE40235.1| unnamed protein product [Mus musculus]
gi|148691622|gb|EDL23569.1| mCG15576, isoform CRA_a [Mus musculus]
gi|148691624|gb|EDL23571.1| mCG15576, isoform CRA_a [Mus musculus]
gi|148691625|gb|EDL23572.1| mCG15576, isoform CRA_a [Mus musculus]
gi|149069447|gb|EDM18888.1| cyclin D3 [Rattus norvegicus]
Length = 292
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 91 ------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 EWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|577335|dbj|BAA03815.1| cyclin D2 [Rattus norvegicus]
Length = 288
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + ++R +L+ + K + LA+NY DRF++
Sbjct: 30 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEGQKCEEEVFPLAMNYLDRFLAG 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
P+ L L + +A KL++ ++ + + L EL +L
Sbjct: 90 VPTPKT------HLQLLGAVVMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVL 143
Query: 131 NGLEWRSRAVVAVNFVPFFL-NISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L + K + R+H I D FA PS+IA
Sbjct: 144 GKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIAT 203
Query: 187 AALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ L +DE E L T+ D D L +
Sbjct: 204 GSVGAAICGLQQDEEVNALTCDALTELLAKITHTDVDCLKA 244
>gi|1150932|emb|CAA61334.1| cyclin [Medicago sativa]
Length = 386
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 29 INEANFLRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLV 85
IN + +PR A++ +L+ + +A LA+NY DRF+ S H E ++
Sbjct: 101 INFDSLSQPRREAVEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQ---- 156
Query: 86 LAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVN 144
L A C+ +A K+ + Q D + +K MEL IL+ L+W+ V +
Sbjct: 157 LVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHS 216
Query: 145 FVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVC-KLL 196
F+ +I G+K R +++ D F C PSV+A A ++HV ++
Sbjct: 217 FLD---HIIRRLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIE 273
Query: 197 LRDENG 202
D+NG
Sbjct: 274 QSDDNG 279
>gi|118403824|ref|NP_001072146.1| G1/S-specific cyclin-D3 [Sus scrofa]
gi|115522019|gb|ABJ09399.1| cyclin D3 [Sus scrofa]
Length = 292
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQRE-IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L C+++A KLR+ + + + Y+ H++
Sbjct: 91 ------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IYTDHSVSPRQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASC 179
+ E+ +L L+W AV+A +F+ L+ + + + ++H + D +FA
Sbjct: 139 DWEVLVLGKLKWDLAAVIAHDFLALILHRLALPRDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|13278570|gb|AAH04076.1| Cyclin D3 [Mus musculus]
Length = 292
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 32 LRLEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------ 123
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 91 ------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLR 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA
Sbjct: 139 EWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMY 198
Query: 180 KPSVIAAAAL 189
PS+IA ++
Sbjct: 199 PPSMIATGSI 208
>gi|338718434|ref|XP_001918037.2| PREDICTED: g1/S-specific cyclin-D3-like [Equus caballus]
Length = 324
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 112 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 159
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ H++ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 160 TDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLA 219
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 220 LCATDYTFAMYPPSMIATGSI 240
>gi|47221876|emb|CAF98888.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 13 YFDVEEKSMPAAGYAYINEAN-----FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
++E+ +P Y+Y F+R +L+ + K + LA+NY DRF
Sbjct: 30 LLTIKERFLPQ--YSYFKGVQKDIQPFMRRMVSTWMLEVCQEQKCEEEVFPLAMNYLDRF 87
Query: 68 ISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMEL 127
++ V+ + +L L C+ +A KL++ ++ + + L EL
Sbjct: 88 LA------VVPTKKCNLQLLGAVCMFLASKLKETRPLTAEKLCIYTDNSIRPQELLEWEL 141
Query: 128 QILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+L L+W AV +F+ + + R+HV I D FA PS+
Sbjct: 142 VVLGKLKWNLAAVTPNDFIEHIMRRLPLPEDKLALIRKHVQTFIALCATDFRFAMYPPSM 201
Query: 184 IAAAAL-VHVCKLLLRDEN 201
IA ++ +C L L N
Sbjct: 202 IATGSVGAAICGLQLDSAN 220
>gi|125537218|gb|EAY83706.1| hypothetical protein OsI_38928 [Oryza sativa Indica Group]
Length = 364
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLP-EVLGNVEDDLVLAANCCLII 94
R AIK IL+ YLA+ YFDRF + + E + L +A C+ +
Sbjct: 99 RLAAIKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIA---CVSV 155
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFF 149
A KL + QS + S+F AG R + ++ MEL +L+ L WR AV +F+P F
Sbjct: 156 AAKLEEYQSPALSEFDAGGG--RVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCF 210
>gi|193716056|ref|XP_001952350.1| PREDICTED: g1/S-specific cyclin-D2-like [Acyrthosiphon pisum]
Length = 291
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 12 KYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI 68
K + E + +P Y + +N F+R +L + + + L++N+ DRF+
Sbjct: 32 KLLETESQYVPGCDYMAHSHSNLQPFMRRVVATWMLDVCEEQRCEDQVFPLSVNFLDRFL 91
Query: 69 SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQ 128
+ + L L CL++A K+R + + + + EL
Sbjct: 92 CACDISKT------HLQLTGAVCLLLASKVRQCTALSIELLCYYTENSVTPEEMREWELL 145
Query: 129 ILNGLEWRSRAVVAVNFVPFFLNISSAK----GIKRRHVNRIIIEAQADLSFASCKPSVI 184
+++ LEWR AV + ++V + K + RRH+ +I + F KPSV+
Sbjct: 146 VISKLEWRIVAVTSFDYVDHIMEQIKWKRRNDSMLRRHMLTLISFCYIEPDFIEKKPSVM 205
Query: 185 AAAALV 190
AA+ ++
Sbjct: 206 AASCML 211
>gi|351727156|ref|NP_001237151.1| cyclin d3 [Glycine max]
gi|42362319|gb|AAS13371.1| cyclin d3 [Glycine max]
Length = 396
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ IL+ + +A LA+ Y DRF+ S H E ++ L A C+ +
Sbjct: 116 RREAVEWILKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQ----LVAVTCISL 171
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q D + +K MEL +L+ L+W+ V ++F+ +I
Sbjct: 172 AAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLD---HII 228
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R +++ D F C PSV+A A ++HV
Sbjct: 229 RRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHV 274
>gi|225466890|ref|XP_002268586.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]
Length = 352
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ IL+ + YL++N+ DR +S + LP + L +A CL +
Sbjct: 95 VRREAVDWILKAHACHGFGPLSLYLSINFLDRVLSVYQLPTRRPWIVRLLSVA---CLSV 151
Query: 95 AWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-I 152
A K+ + + S + G+ +K MEL +L L+W+ +A +F+ +FL+ +
Sbjct: 152 AAKVEETNVPLSIELQVGDPRLMFEAKTIRRMELLVLTHLKWKMQAFTPCSFIDYFLSKV 211
Query: 153 SSAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAAALVHV 192
+ K ++R +I+ + F K S IAAA + V
Sbjct: 212 NDHKYPSGSLISRSIQLILSTIKGIDFLEFKASEIAAAVAICV 254
>gi|115473411|ref|NP_001060304.1| Os07g0620800 [Oryza sativa Japonica Group]
gi|75301423|sp|Q8LHA8.1|CCD22_ORYSJ RecName: Full=Cyclin-D2-2; AltName: Full=G1/S-specific cyclin-D2-2;
Short=CycD2;2
gi|22296414|dbj|BAC10182.1| putative D-type cyclin [Oryza sativa Japonica Group]
gi|113611840|dbj|BAF22218.1| Os07g0620800 [Oryza sativa Japonica Group]
gi|125601116|gb|EAZ40692.1| hypothetical protein OsJ_25159 [Oryza sativa Japonica Group]
gi|215686561|dbj|BAG88814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 356
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSF-SDFMAGNNLPR 116
YLA+NY DRF+S LP ++ L ++ CL +A K+ + D +
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQLLSVS---CLSLATKMEETVVPLPMDLQVFDAEYV 173
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
++H MEL ++ L+WR +AV +F+ +FL+
Sbjct: 174 FEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLD 208
>gi|6978619|ref|NP_036898.1| G1/S-specific cyclin-D3 [Rattus norvegicus]
gi|1345742|sp|P48961.1|CCND3_RAT RecName: Full=G1/S-specific cyclin-D3
gi|577337|dbj|BAA03816.1| cyclin D3 [Rattus norvegicus]
Length = 293
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L CL++A KLR+ + + + Y
Sbjct: 80 LAMNYLDRYLS------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IY 127
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIII 168
+ A+ E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 128 TDQAMAPWQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLA 187
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 188 LCATDYTFAMYPPSMIATGSI 208
>gi|125559205|gb|EAZ04741.1| hypothetical protein OsI_26903 [Oryza sativa Indica Group]
Length = 356
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSF-SDFMAGNNLPR 116
YLA+NY DRF+S LP ++ L ++ CL +A K+ + D +
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQLLSVS---CLSLATKMEETVVPLPMDLQVFDAEYV 173
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
++H MEL ++ L+WR +AV +F+ +FL+
Sbjct: 174 FEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLD 208
>gi|224056262|ref|XP_002298781.1| predicted protein [Populus trichocarpa]
gi|222846039|gb|EEE83586.1| predicted protein [Populus trichocarpa]
Length = 400
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
K D E MP + Y + + R +I IL+ + L++NYFD
Sbjct: 101 ITKLIDSESHFMPLSDYLHRCRHRSIDITARQDSINWILKVYAHYEFRPLTALLSVNYFD 160
Query: 66 RFISKHTLPE-----VLGNVEDDLVLAA-----NCCLIIAWKLRDQSFSFSDFMAGNNLP 115
RF+S ++LPE L +V L LAA + L++ ++ + F F P
Sbjct: 161 RFLSSYSLPENGWPFQLLSVA-CLSLAAKMEEPDVPLLLDLQILEPGFIFE--------P 211
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNRIIIEAQADL 174
+N K MEL+++ L WR R+ +++ +F++ + S K + +R +++ ADL
Sbjct: 212 KNIQK----MELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDR-VLKKSADL 266
>gi|222625056|gb|EEE59188.1| hypothetical protein OsJ_11124 [Oryza sativa Japonica Group]
Length = 555
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 58 YLALNYFDRFIS--KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
YLA+NY DRF+S + ++ + ++ L++A CL +A K+ + + + + N
Sbjct: 248 YLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVA---CLSLAAKMEETAAPGTLDLQVCNPE 304
Query: 116 RNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEA 170
+ ++ ME+ +L L+WR +AV ++ FL+ I+ I ++R II+
Sbjct: 305 YVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILST 364
Query: 171 QADLSFASCKPSVIAAAALVHV 192
F +PS IA A + V
Sbjct: 365 MKATVFLRFRPSEIATAVALSV 386
>gi|297825127|ref|XP_002880446.1| CYCD2_1 [Arabidopsis lyrata subsp. lyrata]
gi|297326285|gb|EFH56705.1| CYCD2_1 [Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R +A+ IL+ A L++NY DRF++ + LP+ + + + L A CL +
Sbjct: 97 VRNQALDWILKVCAHYHFGALCICLSMNYLDRFLTSYELPK---DKDWAVQLLAVSCLSL 153
Query: 95 AWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + D + +K MEL +LN L WR +A+ +F+ +F++
Sbjct: 154 AAKMEETDVPQIVDLQVEDPKFVFEAKTIKRMELLVLNTLNWRLQALTPFSFIDYFVDKI 213
Query: 154 S---AKGIKRRHVNRIIIEAQADLSFASCKPS 182
S ++ + R +R I+ + F +PS
Sbjct: 214 SGHVSENLIYRS-SRFILNTTKAIEFLEFRPS 244
>gi|297819688|ref|XP_002877727.1| CYCD3_3 [Arabidopsis lyrata subsp. lyrata]
gi|297323565|gb|EFH53986.1| CYCD3_3 [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 28/230 (12%)
Query: 26 YAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED 82
Y I + FL R +A+ I + N+ LA+NYFDRFI+ +
Sbjct: 74 YDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQ 133
Query: 83 DLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVV 141
L A CL +A K+ + DF +K MEL +L+ LEW+ V
Sbjct: 134 ---LTALACLSLAAKVEEIRVPLLLDFQVEEARYVFEAKTIQRMELLVLSTLEWKMHPVT 190
Query: 142 AVNFVPFFLNISSAKGIKR----RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLL 197
A++F + S K ++ +++ D F PSV+A A +V V +
Sbjct: 191 AISFFDHIIRRYSFKSHQQLEFLSRCESLLLSIVPDSRFLRFSPSVLATAIMVSVIR--- 247
Query: 198 RDENGERPDAKRCRES-----LIDSTYVDEDSLD-SFCTMLDHMCCRKKM 241
D K C E+ L+ VD + ++ + +LDH K+M
Sbjct: 248 --------DFKMCDEADYQSQLMTLLKVDSEKVNKCYELVLDHSPSNKRM 289
>gi|449282260|gb|EMC89124.1| G1/S-specific cyclin-D2 [Columba livia]
Length = 285
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 14/194 (7%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+EE+ +P Y + + F+R +L+ + K + LA+NY DRF++
Sbjct: 31 LTIEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VVPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F L K R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFTEHILRKLPLPKDKLLLIRKHAQTFIAVCATDFNFALYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRD 199
++ +C L L D
Sbjct: 205 GSVGAAICGLQLDD 218
>gi|148231416|ref|NP_001079130.1| G1/S-specific cyclin-D2 [Xenopus laevis]
gi|1705785|sp|P53782.1|CCND2_XENLA RecName: Full=G1/S-specific cyclin-D2
gi|603900|emb|CAA58493.1| cyclin D2 [Xenopus laevis]
gi|897821|emb|CAA61665.1| cyclin D2 [Xenopus laevis]
gi|213623404|gb|AAI69698.1| Cyclin D2 [Xenopus laevis]
gi|213626602|gb|AAI69700.1| Cyclin D2 [Xenopus laevis]
Length = 291
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 15/222 (6%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
VEE+ +P Y + + F+R +L+ + + + +A+NY DRF++
Sbjct: 31 LTVEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQRCEEEVFPMAMNYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL++ ++ + + L EL +L
Sbjct: 90 -----VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W AV +F+ L K R+H I D +FA PS+IA
Sbjct: 145 GKLKWNLAAVTPHDFIEHILRKLPLPKDKLLLIRKHAQTFIALCATDFNFAMYPPSMIAT 204
Query: 187 AAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
++ +C L L D E L T D D L +
Sbjct: 205 GSVGAAICGLQL-DVGETSLSGDSLTEHLAKITSTDVDCLKA 245
>gi|122224365|sp|Q10K98.1|CCD23_ORYSJ RecName: Full=Putative cyclin-D2-3; AltName: Full=G1/S-specific
cyclin-D2-3; Short=CycD2;3
gi|108708580|gb|ABF96375.1| Cyclin, N-terminal domain containing protein [Oryza sativa Japonica
Group]
Length = 405
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 58 YLALNYFDRFIS--KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLP 115
YLA+NY DRF+S + ++ + ++ L++A CL +A K+ + + + + N
Sbjct: 126 YLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVA---CLSLAAKMEETAAPGTLDLQVCNPE 182
Query: 116 RNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNR---IIIEA 170
+ ++ ME+ +L L+WR +AV ++ FL+ I+ I ++R II+
Sbjct: 183 YVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILST 242
Query: 171 QADLSFASCKPSVIAAAALVHV 192
F +PS IA A + V
Sbjct: 243 MKATVFLRFRPSEIATAVALSV 264
>gi|297735936|emb|CBI18712.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ IL+ + YL++N+ DR +S + LP + L +A CL +
Sbjct: 95 VRREAVDWILKAHACHGFGPLSLYLSINFLDRVLSVYQLPTRRPWIVRLLSVA---CLSV 151
Query: 95 AWKLRDQSFSFSDFMAGNNLPRNY--SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN- 151
A K+ + + S + PR +K MEL +L L+W+ +A +F+ +FL+
Sbjct: 152 AAKVEETNVPLSIELQEVGDPRLMFEAKTIRRMELLVLTHLKWKMQAFTPCSFIDYFLSK 211
Query: 152 ISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVIAAAALVHV 192
++ K ++R +I+ + F K S IAAA + V
Sbjct: 212 VNDHKYPSGSLISRSIQLILSTIKGIDFLEFKASEIAAAVAICV 255
>gi|356518130|ref|XP_003527735.1| PREDICTED: cyclin-D5-1-like [Glycine max]
Length = 314
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 24/176 (13%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ + YL++ YFDRF+S+ ++ + L + CL +A
Sbjct: 72 RVEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSID---SEKSWAIRLLSIACLSLA 128
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYS---KHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
K+ + + S+F +YS K MEL +L+ LEW + +F+ +F+
Sbjct: 129 AKMEECNVPGLSEFKLD-----DYSFEGKVIQKMELLVLSTLEWEMGIITPFDFLSYFIT 183
Query: 152 ISSAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAA-LVHVCKLLLRD 199
K K ++I +++ KPSVIA AA LV + + L RD
Sbjct: 184 ----KFCKESPPSPIFYKTMQLIFTTMKEVNLMDHKPSVIAVAATLVAMDQQLTRD 235
>gi|4160298|emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
Length = 354
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S + LP + + L A CL +A K+ + + + D G+
Sbjct: 119 LSINYLDRFLSLYELPR---SKTWTVQLLAVACLSLAAKMEEINVPLTVDLQVGDPKFVF 175
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHV----NRIIIEAQAD 173
K MEL +L+ L+WR +A F+ +F+ + I R + ++I+
Sbjct: 176 EGKTIQRMELLVLSTLKWRMQAYTPYTFIDYFMRKMNGDQIPSRPLISGSMQLILSIIRS 235
Query: 174 LSFASCKPSVIAAAALVHV 192
+ F + S IAA+ + V
Sbjct: 236 IDFLEFRSSEIAASVAMSV 254
>gi|224085407|ref|XP_002187040.1| PREDICTED: G1/S-specific cyclin-D3-like [Taeniopygia guttata]
Length = 287
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + +
Sbjct: 80 LAMNYVDRYLSS------VAVQKSHLQLLGAVCMLLASKLRETMPLTVEKLCIYTDNSIT 133
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-----ISSAKGIKRRHVNRIIIEAQAD 173
+ LN EL +L L+W +V+A +F+P L+ + + +K +H I D
Sbjct: 134 PQELLNWELLVLEKLKWDLVSVIANDFLPHILHQLPLPLDKVELVK-KHAQTFIALCATD 192
Query: 174 LSFASCKPSVIAAAAL 189
+F PS+IA ++
Sbjct: 193 DTFVMYPPSMIATGSI 208
>gi|255581192|ref|XP_002531409.1| cyclin d, putative [Ricinus communis]
gi|223529002|gb|EEF30993.1| cyclin d, putative [Ricinus communis]
Length = 386
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLAL 61
D N P F + +S+ A+ R ++ IL+ + YL++
Sbjct: 89 DERNFVPGFDYLSRFQSRSLDASA----------REDSVAWILKVQTYYRFQPLTAYLSV 138
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSK 120
NY DRF+ +LP+ G L +A CL +A K+ + S D +
Sbjct: 139 NYLDRFLYSRSLPQSKGWPMQLLSVA---CLSLAAKMEEPLVPSLLDLQVEGAKYIFEPR 195
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSA-KGIKRRHVNRIIIEAQADLSF 176
MEL +L+ L+WR R+V +F+ FF L+ S A G II+ + SF
Sbjct: 196 TIRRMELLVLSVLDWRLRSVTPFSFIGFFACKLDSSGAYTGFLISRATEIILSNMQEASF 255
Query: 177 ASCKPS 182
PS
Sbjct: 256 LEYWPS 261
>gi|21745140|gb|AAM77274.1|AF519811_1 cyclin D3.2 protein [Lagenaria siceraria]
Length = 380
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N + R AI +L+ + ++ LA+NY DR +S P + L LAA
Sbjct: 94 NALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSG---PYFQRDKPWMLQLAAV 150
Query: 90 CCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF 148
C+ +A K+ + D ++ +K MEL +L L+W+ V V+F+
Sbjct: 151 TCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVAPVSFLGI 210
Query: 149 FLNISSAKGIKRRHVN--------RIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDE 200
I+ G+K +++ RI++ +D PS++A +A+V V +E
Sbjct: 211 ---ITKGLGMKNQYIQREFLRRCERILLSLVSDSRSVGILPSIMAVSAMVSVV-----EE 262
Query: 201 NGERPDAKRCRESLIDSTYVDEDSLDSFCTML 232
G + ++ L+++ +++ + C ++
Sbjct: 263 MGNCNPLEEFQDQLLNALKINKGRVKECCKVI 294
>gi|350579864|ref|XP_003480701.1| PREDICTED: hypothetical protein LOC100738589 [Sus scrofa]
Length = 660
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 42 VILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQ 101
V LQ + K + LA+NY DRF+S + + L L C+ +A K+++
Sbjct: 285 VPLQVCEEQKCEEEVFPLAMNYLDRFLSLEPV------KKSRLQLLGATCMFVASKMKET 338
Query: 102 SFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKG 157
++ + L MEL ++N L+W A+ +F+ FL+ K
Sbjct: 339 IPLTAEKLCIYTDNSIRPDELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQ 398
Query: 158 IKRRHVNRIIIEAQADLSFASCKPSV 183
I R+H + D+ F S PS+
Sbjct: 399 IIRKHAQTFVALCATDVKFISNPPSM 424
>gi|148691626|gb|EDL23573.1| mCG15576, isoform CRA_c [Mus musculus]
Length = 289
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L CL++A KLR+ + + + Y
Sbjct: 77 LAMNYLDRYLS------CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IY 124
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIII 168
+ A+ E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 125 TDQAVAPWQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLA 184
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 185 LCATDYTFAMYPPSMIATGSI 205
>gi|209862835|ref|NP_001129489.1| G1/S-specific cyclin-D3 isoform 1 [Homo sapiens]
gi|193787061|dbj|BAG51884.1| unnamed protein product [Homo sapiens]
Length = 211
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 61 LNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYS 119
+NY DR++S + + L L C+++A KLR+ + + Y+
Sbjct: 1 MNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI-------YT 47
Query: 120 KHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIE 169
HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 48 DHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLAL 107
Query: 170 AQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 108 CATDYTFAMYPPSMIATGSI 127
>gi|119624477|gb|EAX04072.1| cyclin D3, isoform CRA_c [Homo sapiens]
gi|119624478|gb|EAX04073.1| cyclin D3, isoform CRA_c [Homo sapiens]
gi|119624479|gb|EAX04074.1| cyclin D3, isoform CRA_c [Homo sapiens]
gi|193788351|dbj|BAG53245.1| unnamed protein product [Homo sapiens]
Length = 211
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 61 LNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYS 119
+NY DR++S + + L L C+++A KLR+ + + Y+
Sbjct: 1 MNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI-------YT 47
Query: 120 KHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIE 169
HA+ + E+ +L L+W AV+A +F+ F L+ S + + ++H +
Sbjct: 48 DHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLAL 107
Query: 170 AQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 108 CATDYTFAMYPPSMIATGSI 127
>gi|355676257|gb|AER95741.1| cyclin D1 [Mustela putorius furo]
Length = 293
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 31 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 89
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L MEL +
Sbjct: 90 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLL 143
Query: 130 LNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W AV +F+ FL+ A + I R+H + D+ F S PS+
Sbjct: 144 VNKLKWNLAAVTPHDFIEHFLSKMPAAEENRQIIRKHAQTFVALCATDVKFISNPPSM 201
>gi|356523988|ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]
Length = 351
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 51 KRNAYIPY------LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS 104
K +AY + L++NY DRF+S + LP + L A CL IA K+ +
Sbjct: 109 KAHAYFDFGPCSLCLSVNYLDRFLSVYELPR---GKSWSMQLLAVACLSIAAKMEEIKVP 165
Query: 105 -FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRRH 162
D G +K MEL +L+ L W+ +A +F+ +FL I+ + I +
Sbjct: 166 PCVDLQVGEPKFAFEAKDIQRMELLVLSTLRWKMQASTPFSFLDYFLRKITCDQVIVKSS 225
Query: 163 VNRI---IIEAQADLSFASCKPSVIAAAALVHV 192
+ R I+ ++F +PS IAAA + V
Sbjct: 226 ILRSVGPILNIIKCINFLEFRPSEIAAAVAISV 258
>gi|224010127|ref|XP_002294021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970038|gb|EED88376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 290
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 56 IPYLALNYFDRFISKHTLPEVLG-NVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
I A + FDRF+SK +L L + + D L CLIIA K R SDF++
Sbjct: 119 IALSATSLFDRFMSKQSLRAGLAMHSKYDFQLIFITCLIIALKARAGMVVESDFVSATMC 178
Query: 115 PRNYSK-HALNMELQILNGLEWRSRAVVAVNFVPFFL-----NISSAKGIKRRHVNRIII 168
Y + ++ME++IL L WR F+ +L ++ S+K I +
Sbjct: 179 QGLYQQDEIVSMEMKILKVLGWRVNGPNIHEFIHLYLELLPDDVKSSKTIAMLTDLATAM 238
Query: 169 EAQADLSF--ASCKPSVIAAAALV 190
QA L + A PS IA A ++
Sbjct: 239 AEQATLDYPMALRAPSTIAMACIL 262
>gi|395534141|ref|XP_003769106.1| PREDICTED: G1/S-specific cyclin-D3 [Sarcophilus harrisii]
Length = 264
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRN 117
LA+NY DR++S + + L L C+++A KLR+ + + + +
Sbjct: 52 LAMNYLDRYLS------CVPTRKCHLQLLGAVCMLLASKLRETTPLTMEKLCIYTD--HS 103
Query: 118 YSKHAL-NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQA 172
+ H L + E+ +L L+W AV+A +F+ L+ + + ++H +
Sbjct: 104 ITPHQLRDWEVIVLGRLKWDLAAVIAHDFLALILHRLPVPQDRRALVKKHAQTFLALCAT 163
Query: 173 DLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 164 DYTFAMYPPSMIATGSI 180
>gi|255646576|gb|ACU23762.1| unknown [Glycine max]
Length = 381
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A++ IL+ + + LA+NY DRF+ N LAA CL +A
Sbjct: 103 RQEAVEWILKVNAHYSFSTLTAVLAVNYLDRFLFSFRFQNDSNNNPWLTQLAAVACLSLA 162
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + F D + +K ME+ +L+ L W+ V ++F+ +
Sbjct: 163 AKVEETHVPLFVDLQVEESKYLFEAKAVNRMEILVLSALGWQMNPVTPLSFLDYITRKLG 222
Query: 155 AKGIK----RRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLL 196
KG R +++ AD F PSV+A A ++ V ++
Sbjct: 223 LKGYLCLEFLRRCETVLLSVFADSRFMGYLPSVVATATVMRVVNIV 268
>gi|224010413|ref|XP_002294164.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970181|gb|EED88519.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 301
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 56 IPYLALNYFDRFISKHTLPEVLG-NVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
I A + FDRF+SK +L L + + D L CLIIA K R SDF++
Sbjct: 77 IALSAASLFDRFMSKQSLRAGLAMHSKYDFQLIFITCLIIALKARAGMMVESDFVSATMC 136
Query: 115 PRNYSK-HALNMELQILNGLEWRSRAVVAVNFVPFFL-----NISSAKGIKRRHVNRIII 168
Y + ++ME++IL L WR F+ +L ++ S+K I +
Sbjct: 137 QGLYQQDEIVSMEMEILKVLGWRVNGPNIHEFIHLYLELLPDDVKSSKTIAMLTDLATAM 196
Query: 169 EAQADLSF--ASCKPSVIAAAALV 190
QA L + A PS IA A ++
Sbjct: 197 AEQATLDYLMALRAPSAIAMACIL 220
>gi|162956921|gb|ABY25839.1| D-type cyclin family 3 subgroup 2 [Solanum tuberosum]
Length = 361
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ + +A LA+NY DRF+S + + LAA CL +A
Sbjct: 98 RVDVVEWILKANAHYDFSALTAILAINYLDRFLSSLQFQKDKPWMTQ---LAAVTCLSLA 154
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q DF + +K MEL +L+ L+WR V ++F+ +I
Sbjct: 155 AKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLD---HIIR 211
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R +++ F PSV+A A ++HV
Sbjct: 212 RLGLKNNAHWEFLRRCESLLLFVMTGCRFVRYMPSVLATAIMLHV 256
>gi|3608179|dbj|BAA33153.1| cyclin D [Pisum sativum]
Length = 384
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 48 KSNKRNAYIPY---LALNYFDRFISKHTLPEVLGNVEDD----LVLAANCCLIIAWKLRD 100
K N A+ P LA+ YFDRF+ + + + D + L A C+ +A K+ +
Sbjct: 114 KVNAHYAFSPLTATLAVTYFDRFL-------LTFHFQKDKPWMIQLVAVTCISLAAKVEE 166
Query: 101 -QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK 159
Q D + +K MEL IL+ L+W+ V +F+ +I + G+K
Sbjct: 167 TQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTPHSFLD---HIITRLGLK 223
Query: 160 R-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVC-KLLLRDENG 202
R +++ D F C PSV+A A ++HV ++ D+NG
Sbjct: 224 TNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIEESDDNG 274
>gi|307135857|gb|ADN33726.1| cyclin d3.1 [Cucumis melo subsp. melo]
Length = 359
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A++ +L+ + +A LA++YFDRF+S + LAA C+ +A
Sbjct: 91 RRTAVEWMLKVNAHYSFSALTAVLAVDYFDRFLSCFHFQRDKPWMSQ---LAAVACISLA 147
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + D ++ +K MEL +L+ L+WR V +FV + I+
Sbjct: 148 AKVEETHVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDY---ITR 204
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCK 194
G K R I+ + F S PS +A A ++HV K
Sbjct: 205 RLGFKDHMCWEILWQCERTILSVILESDFMSFLPSAMATATMLHVFK 251
>gi|112280279|gb|ABI14673.1| cyclin D3 [Oryctolagus cuniculus]
Length = 214
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRN 117
LA+NY DR++S + + L L C+++A KLR+ + +
Sbjct: 32 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI------- 78
Query: 118 YSKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRII 167
Y+ HA+ + E +L L+W AVVA +F+ L+ S + + ++H +
Sbjct: 79 YTDHAVSPRQLRDWEALVLGKLKWDLAAVVAHDFLALILHRLSLPSDRQALVKKHAQTFL 138
Query: 168 IEAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 139 ALCATDYTFAMYPPSMIATGSI 160
>gi|432851097|ref|XP_004066854.1| PREDICTED: G1/S-specific cyclin-D1-like [Oryzias latipes]
Length = 292
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE +PA Y + + + P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEENYLPAPNYFKCVQKD-IAPNMRKILATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
V + L L C+ +A K+++ ++ + L MEL +
Sbjct: 91 ------VEPTRKSRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNSVQPGELLQMELLV 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIA 185
L+ L+W +V +F+ FL+ +S K I R+H + D++F + PS++A
Sbjct: 145 LSKLKWDLASVTPHDFIEHFLSKLTIHASTKQILRKHAQTFVALCATDVNFIASPPSMVA 204
>gi|240848607|ref|NP_001155756.1| cyclin D2-like [Acyrthosiphon pisum]
gi|239791929|dbj|BAH72367.1| ACYPI008338 [Acyrthosiphon pisum]
Length = 285
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S + + + + L L CL+++ KLR+ D +
Sbjct: 79 LAVNYMDRFLSVNPINK------NHLQLLGTTCLLVSSKLRESDCLSVDLLVLYTDNTIT 132
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFL---NISSAK---GIKRRHVNRIIIEAQA 172
S+ L EL +L+ L+W A+ A +F+ + L ++ +AK + +H I
Sbjct: 133 SEELLMWELLLLSILKWDVSAITAHDFLWYILKRLHMDTAKPFVDVVIKHCGTFIGMCSR 192
Query: 173 DLSFASCKPSVIAAAAL 189
D F S KPSVIA A++
Sbjct: 193 DYKFCSYKPSVIAGASI 209
>gi|359482094|ref|XP_002271184.2| PREDICTED: putative cyclin-D7-1-like [Vitis vinifera]
gi|297740336|emb|CBI30518.3| unnamed protein product [Vitis vinifera]
Length = 338
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 17 EEKSMPAAGYAY---INEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS---- 69
E MP YA+ ++ R R I+ I+++ + + A NY DRFIS
Sbjct: 54 ELSYMPEPEYAHRLRFDDMGISRFRVIQWIIKSRSRLNLSLETVFSAANYLDRFISMNQW 113
Query: 70 ---KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-M 125
K+ + E+L CL +A K + D + +L ++ + M
Sbjct: 114 HGWKYWMVELLSVA----------CLSVASKFTESFTPSFDEIQMEDLEHSFESSTIQRM 163
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFL-NISSAKGIKRR----HVNRIIIEAQADLSFASCK 180
EL +L L WR R+ F L +I S + + V +++ + +D F +
Sbjct: 164 ELTLLQALGWRLRSTTPYTFAELLLWSIDSLQPYLHQELITRVTDLLLHSLSDSKFLDFR 223
Query: 181 PSVIAAAAL 189
PSV+A +A+
Sbjct: 224 PSVVAVSAI 232
>gi|224103775|ref|XP_002313188.1| predicted protein [Populus trichocarpa]
gi|159025701|emb|CAN88851.1| D1-type cyclin [Populus trichocarpa]
gi|222849596|gb|EEE87143.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 31/157 (19%)
Query: 11 VKYFDVEEKSMPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
K+ D E + MP + Y + + R +I IL+ L++NYFDR
Sbjct: 29 TKFIDSESQFMPLSDYLHRCRHRSIDTTARQDSINWILKVHAHYAFRPLTALLSVNYFDR 88
Query: 67 FISKHTLPEVLGNVEDDLVLAANCC------------LIIAWKLRDQSFSFSDFMAGNNL 114
F+S ++LPE N +L+ C L++ ++ + F F
Sbjct: 89 FLSSYSLPE---NGWPYQILSVACLSLAAKMEEPDVPLLLDLQVLEPGFIFE-------- 137
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
P+N K MEL+++ L WR R+V +++ +F++
Sbjct: 138 PKNIQK----MELRVMAYLNWRLRSVTPFDYLDYFIS 170
>gi|1588543|prf||2208459A cyclin
Length = 281
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRN 117
LA+NY DR++S+ +P L L L+IA K+ + +F+ + N
Sbjct: 83 LAVNYVDRYLSRVPVPR------HQLQLVGVASLLIASKMEEIMHPQIDEFVYITDSTYN 136
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSFA 177
+ L MEL ILN L + V +FV +L ++ A + ++ + +F
Sbjct: 137 -REQVLRMELSILNALRYDMTVVTPRDFVGIYLKVAQASPEVCMLADYLLELILQEYAFL 195
Query: 178 SCKPSVIAAAALV 190
+PS+IAA+A+V
Sbjct: 196 HWEPSMIAASAVV 208
>gi|294461591|gb|ADE76356.1| unknown [Picea sitchensis]
Length = 347
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 14 FDVEEKS--MPAAGYAYINEANFL----RPRAIKVILQNSKSNKRNAYIPYLALNYFDRF 67
F VE++ MP GY ++ L R + IL+ YLA+NY DRF
Sbjct: 61 FLVEKECDHMPQDGYLQRFQSRTLDVSVRQDGLSWILKVHAYYNFGPLTAYLAINYLDRF 120
Query: 68 ISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-ME 126
+S + +P+ + L L + CL +A K+ + + + + + ME
Sbjct: 121 LSSYQMPQGKAWM---LQLLSVSCLSLAAKMEETHVPLLLDLQIEDAKYVFEARTIERME 177
Query: 127 LQILNGLEWRSRAVVAVNFVPFFLN 151
L IL L+WR R++ +F+ +F++
Sbjct: 178 LLILTTLKWRLRSITPFSFLHYFVH 202
>gi|345309071|ref|XP_001518484.2| PREDICTED: G1/S-specific cyclin-D2-like [Ornithorhynchus anatinus]
Length = 264
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 59 LALNYFDRFIS-----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNN 113
LA+NY DRF++ KH L ++LG V C+ +A KL++ + ++ +
Sbjct: 51 LAMNYLDRFLAGVPTPKHHL-QLLGAV----------CMFLASKLKETAPLTAEKLCIYT 99
Query: 114 LPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIE 169
+ L EL +L L+W AV +F+ L K R+H I
Sbjct: 100 DNSIKPRELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLCQPRDKLLLIRKHAQTFIAL 159
Query: 170 AQADLSFASCKPSVIAAAAL-VHVCKLLLRDE 200
D +FA PS+IA ++ +C L L E
Sbjct: 160 CATDFTFAMYPPSMIATGSVGAAICGLQLDVE 191
>gi|350537707|ref|NP_001233794.1| cyclin D3.1 [Solanum lycopersicum]
gi|5679622|emb|CAB51788.1| cyclin D3.1 [Solanum lycopersicum]
gi|6434197|emb|CAB60836.1| CycD3;1 [Solanum lycopersicum]
Length = 359
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ +L+ A LA+NYFDRF+S + + LAA CL IA
Sbjct: 90 RKEALDWMLRVIAYYGFTATTAVLAVNYFDRFVSGWCFQKDKPWMSQ---LAAVACLSIA 146
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN--- 151
K+ + Q D ++ +K MEL +L+ L+W+ V ++F+ +
Sbjct: 147 AKVEETQVPLLLDLQVADSRFVFEAKTIQRMELLVLSTLKWKMNLVTPLSFIDHIMRRFG 206
Query: 152 -ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+S+ + R+I++ D PSVIA A++ +V
Sbjct: 207 FMSNLHMDFLKKCERLILDIITDSRLLHYPPSVIATASMFYV 248
>gi|297802572|ref|XP_002869170.1| CYCD3_1 [Arabidopsis lyrata subsp. lyrata]
gi|297315006|gb|EFH45429.1| CYCD3_1 [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL----PEVLGNVEDDLVLAANCC 91
R A+ IL+ + + LA+ Y D+FI ++L P +L L + C
Sbjct: 90 RKEAVGWILRVNAHYGFSTLAAALAITYLDKFICSYSLQRDKPWMLQ-------LVSVAC 142
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
L +A K+ + Q DF +K MEL IL+ L+W+ + ++FV
Sbjct: 143 LSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLQWKMHLITPISFVD--- 199
Query: 151 NISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+I G+K +R+++ +D F PSV+AAA ++ +
Sbjct: 200 HIIRRLGLKNNAHWDFLNKCHRLLLYVISDSRFVGYLPSVVAAATMMRI 248
>gi|259155244|ref|NP_001158863.1| G1/S-specific cyclin-D1 [Salmo salar]
gi|223647748|gb|ACN10632.1| G1/S-specific cyclin-D1 [Salmo salar]
Length = 292
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 59 LALNYFDRFIS----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
LA+N+ DR++S K T ++LG C+ +A K+++ ++ +
Sbjct: 80 LAMNFLDRYLSVEPTKKTRLQLLGAT----------CMFLASKMKETIPLTAEKLCIYTD 129
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEA 170
+ L MEL +LN L+W +V +F+ FL+ K I +H +
Sbjct: 130 NSIRTGELLQMELLVLNKLKWDLASVTPHDFIDHFLSKLPIHQDTKQILCKHAQTFVALC 189
Query: 171 QADLSFASCKPSVIAAAAL 189
D+ F + PS+IAA ++
Sbjct: 190 ATDVKFIANPPSMIAAGSV 208
>gi|410959170|ref|XP_003986185.1| PREDICTED: G1/S-specific cyclin-D3 [Felis catus]
Length = 242
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + L L C+++A KLR+ + + + Y
Sbjct: 30 LAMNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLC------IY 77
Query: 119 SKHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIII 168
+ H++ + E+ +L L+W AV+A +F+ L+ + + + ++H +
Sbjct: 78 TDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLALPRDRQALVKKHAQTFLA 137
Query: 169 EAQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 138 LCATDYTFAMYPPSMIATGSI 158
>gi|53749718|ref|NP_001005452.1| cyclin D1 [Xenopus (Silurana) tropicalis]
gi|49257947|gb|AAH74566.1| cyclin D1 [Xenopus (Silurana) tropicalis]
Length = 291
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 39/193 (20%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE P Y + L P K++ L+ + K + LA+NY DRF+S T
Sbjct: 33 EETCCPNVSYFKCVQKEIL-PHMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVKT 91
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI--- 129
L + L L C+ +A K+++ +P K + + I
Sbjct: 92 LRK------SQLQLLGATCMFLASKMKE------------TIPLTAEKLCIYTDNSIRPE 133
Query: 130 ---------LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSF 176
LN L+W +V +F+ FLN K I R+H + D+ F
Sbjct: 134 ELLLMELLILNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDIKF 193
Query: 177 ASCKPSVIAAAAL 189
S PS+IAA ++
Sbjct: 194 ISNPPSMIAAGSV 206
>gi|54873555|gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum]
Length = 367
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ +L+ A LA+NYFDRF+S + + LAA CL I
Sbjct: 90 VRKEALDWMLRVIAHYGFTAMTAVLAVNYFDRFVSGLCFQKDKPWMSQ---LAAVACLSI 146
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-- 151
A K+ + Q D ++ +K MEL +L+ L+W+ V ++F+ +
Sbjct: 147 AAKVEETQVPLLLDLQVADSRFVFEAKTIQRMELLVLSTLKWKMNPVTPLSFIDHIMRRF 206
Query: 152 --ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+S+ R R+I+ D PSVIA A + V
Sbjct: 207 GFMSNLHLDFLRRCERLILGIITDSRLLYYSPSVIATAVMFFV 249
>gi|388501794|gb|AFK38963.1| unknown [Lotus japonicus]
Length = 346
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 9 DFVKYFDVEEKSM----PAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYF 64
D++ +EK+ PA G +E + R A++ I S A LA+NYF
Sbjct: 39 DYLTTLISKEKATHFHSPADGILASHEGH--RHDAVRWISGVSAFYGFTALTTVLAVNYF 96
Query: 65 DRFISKHTLPEVLGNVEDDLVLAANC--CLIIAWK-------LRDQSFSFSDFMAGNNLP 115
DRF+S TL + + A C L+ WK L Q S+F+
Sbjct: 97 DRFVS--TLKFQMDKPWMTHLTAVTCFVSLLQKWKKTQVPLLLDLQQVEESEFLFE---- 150
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHV---NRIIIEAQ 171
+K MEL +L+ L WR V ++F + +S G+ + R+++
Sbjct: 151 ---AKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLSFMNGLLSEFLCRCERVLLCLI 207
Query: 172 ADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLD-SFCT 230
D S PS +AAA ++H+ K + E +A + L+D + E+ ++ +
Sbjct: 208 VDSRVMSYPPSTLAAATMIHIIKEI------EPFNATEYTDQLLDLLKISEEQVNECYKI 261
Query: 231 MLDHMCC 237
ML + C
Sbjct: 262 MLKLLVC 268
>gi|302780861|ref|XP_002972205.1| hypothetical protein SELMODRAFT_412774 [Selaginella moellendorffii]
gi|300160504|gb|EFJ27122.1| hypothetical protein SELMODRAFT_412774 [Selaginella moellendorffii]
Length = 358
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 25 GY--AYINEANFLRPRAIKVILQNSKSNKRNAY-----IPYLALNYFDRFISKHTLPEVL 77
GY A +A+ L RA+ V N RN Y LA +Y DR++S+H LP+ L
Sbjct: 65 GYLLALQRDASVLHARAVAV---NWMLKVRNVYAFSPMTAALASSYLDRYLSRH-LPKSL 120
Query: 78 GNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY-SKHALNMELQILNGLEWR 136
L+ A C+ +A K+ + + L + +K MEL +L L+WR
Sbjct: 121 KAWAIQLLSIA--CISLAAKMEEIVVPCLPDLQVEGLEHVFEAKTIQRMELVVLKTLDWR 178
Query: 137 SRAVVAVNFVPFFL-NISSAKGIKRRHVNRI---IIEAQADLSFASCKPSVIAAAA 188
V A +V L + +K +K + RI I+ ++ F +PS IA AA
Sbjct: 179 MCGVTAFEYVDDLLYRLDISKHLKASILARITELILGTLSEPEFLVFRPSAIALAA 234
>gi|302791501|ref|XP_002977517.1| hypothetical protein SELMODRAFT_417325 [Selaginella moellendorffii]
gi|300154887|gb|EFJ21521.1| hypothetical protein SELMODRAFT_417325 [Selaginella moellendorffii]
Length = 358
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 25 GY--AYINEANFLRPRAIKVILQNSKSNKRNAY-----IPYLALNYFDRFISKHTLPEVL 77
GY A +A+ L RA+ V N RN Y LA +Y DR++S+H LP+ L
Sbjct: 65 GYLLALQRDASVLHARAVAV---NWMLKVRNVYAFSPMTAALASSYLDRYLSRH-LPKSL 120
Query: 78 GNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY-SKHALNMELQILNGLEWR 136
L+ A C+ +A K+ + + L + +K MEL +L L+WR
Sbjct: 121 KAWAIQLLSIA--CISLAAKMEEIVVPCLPDLQVEGLEHVFEAKTIQRMELVVLKTLDWR 178
Query: 137 SRAVVAVNFVPFFL-NISSAKGIKRRHVNRI---IIEAQADLSFASCKPSVIAAAA 188
V A +V L + +K +K + RI I+ ++ F +PS IA AA
Sbjct: 179 MCGVTAFEYVDDLLYRLDISKHLKASILARITELILGTLSEPEFLVFRPSAIALAA 234
>gi|148691623|gb|EDL23570.1| mCG15576, isoform CRA_b [Mus musculus]
Length = 237
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 16 VEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKH 71
+EE+ +P A Y + ++P K++ L+ + + + LA+NY DR++S
Sbjct: 34 LEERYVPRASYFQCVQKE-IKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLS-- 90
Query: 72 TLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL------NM 125
+ + L L CL++A KLR+ + + + Y+ A+
Sbjct: 91 ----CVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLC------IYTDQAVAPWQLREW 140
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASCKP 181
E+ +L L+W AV+A +F+ L+ S + + ++H + D +FA P
Sbjct: 141 EVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMYPP 200
Query: 182 SVIAAAAL 189
S+IA ++
Sbjct: 201 SMIATGSI 208
>gi|432867619|ref|XP_004071272.1| PREDICTED: G1/S-specific cyclin-D1-like [Oryzias latipes]
Length = 310
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 12 KYFDVEEKSMPAAGYAYINEANFLRPRAI-KVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+ +EE+ MP+ Y + + + R + K L+ + + +++ DRF+S
Sbjct: 51 RLLHLEERYMPSMLYTTLIQRDPERREELAKWALEVCCDCGCDEAVFPRSVSLMDRFLSA 110
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
L LAA C ++IA KL + +D + ME IL
Sbjct: 111 S-----LSLAVSPYCLAAGC-VLIASKLTECDGVTADSLCAAAEYSFQPSDLREMERVIL 164
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAKG--------IKRRHVNRIIIEAQADLSFASCKPS 182
+ L W + AV +F+P FL +G RRH + + D F PS
Sbjct: 165 STLRWDTAAVTPQDFLPHFLASVGEQGDAEREMLSTLRRHSDTLAAMCACDSRFLGAPPS 224
Query: 183 VIAAAAL 189
++AAA+L
Sbjct: 225 LVAAASL 231
>gi|115489350|ref|NP_001067162.1| Os12g0588800 [Oryza sativa Japonica Group]
gi|122248529|sp|Q2QMW1.1|CCD52_ORYSJ RecName: Full=Cyclin-D5-2; AltName: Full=G1/S-specific cyclin-D5-2;
Short=CycD5;2
gi|77556958|gb|ABA99754.1| Cyclin, N-terminal domain containing protein, expressed [Oryza
sativa Japonica Group]
gi|113649669|dbj|BAF30181.1| Os12g0588800 [Oryza sativa Japonica Group]
Length = 365
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLP-EVLGNVEDDLVLAANCCLII 94
R A+K IL+ YLA+ YFDRF + + E + L +A C+ +
Sbjct: 100 RLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIA---CVSV 156
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFF 149
A K+ + QS + S+F AG R + ++ MEL +L+ L WR AV +F+P F
Sbjct: 157 AAKMEEYQSPALSEFDAGGG--RVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCF 211
>gi|224102013|ref|XP_002312511.1| predicted protein [Populus trichocarpa]
gi|159025697|emb|CAN88849.1| D1-type cyclin [Populus trichocarpa]
gi|222852331|gb|EEE89878.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLAL 61
D N P + + + +S+ A+ R +++ IL+ YL++
Sbjct: 48 DERNFVPGYDYFSRFQSQSLDASA----------REQSVAWILKVQACYGFQPLTAYLSV 97
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSK 120
NY DRF+ LP+ G L L + CL +A K+ + S D +
Sbjct: 98 NYLDRFLYSRRLPQTDGW---PLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPR 154
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSA-KGIKRRHVNRIIIEAQADLSF 176
MEL +L L+WR R++ +F FF L+ + A G II+ + SF
Sbjct: 155 TIRRMELLVLGVLDWRLRSITPFSFTGFFACKLDPAGAYTGFLISRATEIILSNIKEASF 214
Query: 177 ASCKPS 182
+PS
Sbjct: 215 LEYRPS 220
>gi|224090773|ref|XP_002309075.1| predicted protein [Populus trichocarpa]
gi|159025740|emb|CAN88869.1| D7-type cyclin [Populus trichocarpa]
gi|222855051|gb|EEE92598.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 13 YFDVEEKSMPAAGYA-YINEANFL--RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
Y + E MP GY ++ N L R RAI+ ++++ + + + A NY DRF+S
Sbjct: 51 YLEKEFTCMPEPGYVEHLRTKNLLFARLRAIQWLIKSRERLSLSFETVFNAANYLDRFMS 110
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQ 128
+ + + L +A CL +A K + + +L ++ + MEL
Sbjct: 111 MNQCHGWKCWMVELLCVA---CLSVASKFTETRTPCLHDIQMEDLDHSFQPITIQRMELV 167
Query: 129 ILNGLEWRSRAVVAVNFVPF------FLNISS--AKGIKRRHVNRIIIEAQADLSFASCK 180
+L L WR + A ++V FL S K + + +++ A D S +
Sbjct: 168 LLRALGWRLGSTTAYSYVELLMMEIDFLKSYSYLQKDLVACRITELLLGAMQDCSMVGFR 227
Query: 181 PSVIAAAAL 189
PS+ A +AL
Sbjct: 228 PSITAISAL 236
>gi|383792045|dbj|BAM10425.1| cyclin, partial [Salix japonica]
Length = 192
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 14 FDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-- 68
F E++ +A + E FL R A++ +L+ +A LA NY DRF+
Sbjct: 2 FSKEQEQQASASVNNVAEDPFLARARQEAVEWMLKVIAHYGFSALTSILAFNYLDRFLYG 61
Query: 69 ---SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALN 124
+ + P ++ L A CL +A K+ + F D + +K
Sbjct: 62 PCYQRDSRPWMIQ-------LVAVTCLSLAAKVEETHVPFLLDLQVEDTKYVFEAKTIQR 114
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFA 177
MEL +L+ L+W+ V ++F+ +I G+K R +++ A +D
Sbjct: 115 MELLVLSTLKWKMHPVTPLSFLD---HIIRRLGLKTQVHWEFLRRCEHLLLSAVSDSRSV 171
Query: 178 SCKPSVIAAAALVHV 192
S PSV+A A ++HV
Sbjct: 172 SYPPSVLATATMMHV 186
>gi|449478720|ref|XP_004155401.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
Length = 335
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL++NY DRF+ LP+ G L L + CL +A K+ + + D
Sbjct: 95 YLSVNYLDRFLCSRRLPQSNGW---PLQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYI 151
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFF------------LNISSAKGIKRRHVN 164
+ MEL +L L+WR R+V NF+ FF IS A I H+
Sbjct: 152 FEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFAYKLDPSGDFIEFLISRATEIILSHIR 211
Query: 165 RII 167
+I
Sbjct: 212 EVI 214
>gi|224129870|ref|XP_002320691.1| predicted protein [Populus trichocarpa]
gi|159025725|emb|CAN88863.1| D5-type cyclin [Populus trichocarpa]
gi|222861464|gb|EEE99006.1| predicted protein [Populus trichocarpa]
Length = 260
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL+ K+ + + YL++ YFDRF+S + N + L + C+ +A
Sbjct: 76 RLEAITWILRTRKNFGFHFHTAYLSMIYFDRFLSSRFIDR---NYTRVVSLISVGCISLA 132
Query: 96 WKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF-LNISS 154
K+ + + + S + +EL IL+ L+WR F+ +F + S
Sbjct: 133 AKMEEVRVPSLPQLQTEGVTFE-STNVERVELGILSTLQWRMNYATPFAFLRYFIIKFSR 191
Query: 155 AKGIKRRHVNRI---IIEAQADLSFASCKPSVIAAAALVHVCK 194
R V+R I+ ++ S +PSVIAAAA + V
Sbjct: 192 QDSPPRETVSRTVQSILALMREIHLMSHRPSVIAAAATLVVLN 234
>gi|147636593|sp|Q69QB8.2|CCD31_ORYSJ RecName: Full=Cyclin-D3-1; AltName: Full=G1/S-specific cyclin-D3-1;
Short=CycD3;1
gi|218197808|gb|EEC80235.1| hypothetical protein OsI_22173 [Oryza sativa Indica Group]
gi|222635205|gb|EEE65337.1| hypothetical protein OsJ_20604 [Oryza sativa Japonica Group]
Length = 342
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVILQNSKS----------NKRNAYIPYLALNYFDR 66
E++ +P GY + L+P + ++ S + K L++NY DR
Sbjct: 64 EQQHIPMEGYL---QRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDR 120
Query: 67 FISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNM 125
F+S LP+ + L +A+ L +A K+ + D + ++ M
Sbjct: 121 FLSVFDLPQEEACMTQLLAVAS---LSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRM 177
Query: 126 ELQILNGLEWRSRAVVAVNFVPFFLN 151
EL +LN L+WR +AV A +F+ ++L+
Sbjct: 178 ELAVLNALKWRMQAVTACSFIDYYLH 203
>gi|449435382|ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
Length = 335
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL++NY DRF+ LP+ G L L + CL +A K+ + + D
Sbjct: 95 YLSVNYLDRFLCSRRLPQSNGW---PLQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYI 151
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFF------------LNISSAKGIKRRHVN 164
+ MEL +L L+WR R+V NF+ FF IS A I H+
Sbjct: 152 FEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFAYKLDPSGDFIEFLISRATEIILSHIR 211
Query: 165 RII 167
+I
Sbjct: 212 EVI 214
>gi|113682259|ref|NP_001038533.1| cyclin D2, b [Danio rerio]
gi|257124414|gb|ACV41907.1| cyclin D2B [Danio rerio]
Length = 295
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-- 68
VE++ +P Y + + F+R +L+ + K + LA+NY DRF+
Sbjct: 31 LTVEDRYVPQGPYFKCVQKDIQPFMRKMVATWMLEVCEEEKCEDDVFPLAMNYLDRFLAA 90
Query: 69 --SKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDF-MAGNNLPRNYSKHALN 124
++ ++LG V CL +A KL+ Q S M +N + + L
Sbjct: 91 VPTRKCYLQLLGAV----------CLFLASKLKACQPLSARKLCMYTDN---SITSQQLL 137
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFASCK 180
EL +L+ L+W A+ ++F+ L+ + R+H I D SF
Sbjct: 138 WELVVLSKLKWNLAAITPLDFIEHILHKLPFHEDRLTLIRKHTQTFIALCATDHSFTMYP 197
Query: 181 PSVIAAAAL-VHVCKL 195
PS+IA + VC L
Sbjct: 198 PSMIATGCVGAAVCGL 213
>gi|356510489|ref|XP_003523970.1| PREDICTED: cyclin-D3-1-like [Glycine max]
Length = 349
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV-----LAANC 90
R A++ IL+ + +A LA+NYFDRF+ ++D+ LAA
Sbjct: 95 RIEAVEWILKVNAHYSFSALTAVLAVNYFDRFLFSF-------RFQNDIKPWMTRLAAVA 147
Query: 91 CLIIAWKLRDQSFSFSDFMAGNNLPRNY--SKHALNMELQILNGLEWRSRAVVAVNFVPF 148
CL +A K+ + F + R +K ME+ IL+ L W+ +++F+ +
Sbjct: 148 CLSLAAKVDETHVPFLIDLQQVEESRYLFEAKTIKKMEILILSTLGWKMNPPTSLSFLDY 207
Query: 149 FLNISSAKGIKRRHV-------NRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDEN 201
F + G+K +++ D F S PSV+A A ++ V K +
Sbjct: 208 F---TRRLGLKDHLFWEFLTKSEGVLLSLIGDSRFMSYLPSVLATATMMQVLK------S 258
Query: 202 GERPDAKRCRESLIDSTYVDEDSLDSFCTML 232
E + L +D++ ++S C ++
Sbjct: 259 VEPSLEAEYKSQLFGILRIDKEKVNSCCKLM 289
>gi|242086062|ref|XP_002443456.1| hypothetical protein SORBIDRAFT_08g019760 [Sorghum bicolor]
gi|241944149|gb|EES17294.1| hypothetical protein SORBIDRAFT_08g019760 [Sorghum bicolor]
Length = 363
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+K IL+ YLA+ YFD F+ + + L+ A C+ +A
Sbjct: 104 RLAAVKWILETRGCFGFGHRTAYLAIAYFDSFLLRRRVDREAMPWAAQLLSVA--CVSVA 161
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFF 149
K+ + Q + S+F AG ++ ++ MEL +L+ L WR RAV +F+P F
Sbjct: 162 AKMEECQVPALSEFHAGGY---DFDSASIRRMELLVLSTLGWRMRAVTPFDFLPCF 214
>gi|356506716|ref|XP_003522122.1| PREDICTED: putative cyclin-D7-1-like [Glycine max]
Length = 241
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 17 EEKSMPAAGYA-YINEANFLRPRAIKVILQNSKSNKR---NAYIPYLALNYFDRFISKHT 72
E +P + Y Y++ N + PR +VI K R + +LA+NY DRF+S
Sbjct: 46 EVSFLPESDYTKYLHSNNLIFPRC-RVIQWFIKCRSRFNISFGTVFLAVNYLDRFVS--- 101
Query: 73 LPEVLGNVED----DLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY-SKHALNMEL 127
+ D L L + CL IA K + S + NL ++ S L MEL
Sbjct: 102 ----ICQCHDWEYWMLELISIACLSIAIKFNEMSALSLHEIQVENLDYSFQSNVILKMEL 157
Query: 128 QILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRII---IEAQADLSFASCKPSVI 184
+L L WR +V + +FV + + ++R+I I+A D +PS++
Sbjct: 158 ILLKVLGWRLNSVTSFSFVEMLSVGFLEPHLHEKFISRVIDLLIQATLDQKMLEFRPSIV 217
Query: 185 AAAA 188
+A
Sbjct: 218 GISA 221
>gi|242050526|ref|XP_002463007.1| hypothetical protein SORBIDRAFT_02g036130 [Sorghum bicolor]
gi|241926384|gb|EER99528.1| hypothetical protein SORBIDRAFT_02g036130 [Sorghum bicolor]
Length = 314
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 30/143 (20%)
Query: 56 IPYLALNYFDRFISKHTL-----PEVLGNVEDDLVLAANCCLIIAWKL----RDQSFSFS 106
+ YLALNY DRF+SK L P L LAA + + + RD+ F F
Sbjct: 80 VAYLALNYVDRFLSKRQLACEQQPWPRLLALSCLSLAAKMQRVATFSIDHIQRDEDFMFD 139
Query: 107 DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS--------SAKGI 158
+ ME +L LEWR+R+V F+ FFL++ I
Sbjct: 140 ------------AATVRRMERWVLGALEWRARSVTPFAFLSFFLSVCYPPPQHPPQVAAI 187
Query: 159 KRRHVNRIIIEAQADLSFASCKP 181
K R V+ +++ AQ ++ A P
Sbjct: 188 KARAVD-LLLRAQPEVKMAEFSP 209
>gi|344295764|ref|XP_003419581.1| PREDICTED: G1/S-specific cyclin-D1-like [Loxodonta africana]
Length = 295
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L+MEL +
Sbjct: 91 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLHMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W A+ +F+ FL+ K I R+H + D+ F S PS+
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPVAQENKQIIRKHAQTFVALCATDVKFISNPPSM 202
>gi|359496416|ref|XP_003635232.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]
gi|296084691|emb|CBI25833.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++ Y DRF+ + LP+ E L L + C+ +A K+ ++S D
Sbjct: 92 YLSVTYLDRFLCTYDLPQ---GKEWSLQLLSVACIAVAAKMEERSVPLLLDLQVMEPRFL 148
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSF 176
+ MEL ++ L+WR V +FV +F++ + + + +DL
Sbjct: 149 FTAMTVQQMELLVMAVLKWRLSTVTPFSFVNYFISKFPCFSSQFHSSSNV-----SDLIL 203
Query: 177 ASCK--------PSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDSF 228
ASC+ PS IAAA+L+ V + D+ E + +E + Y+ + S+
Sbjct: 204 ASCRVTDHLDFLPSSIAAASLLWVAGKNVDDQILEHFHKRVNKEMVKRCHYLIKQSM--- 260
Query: 229 CTML 232
C+M+
Sbjct: 261 CSMV 264
>gi|288872202|ref|NP_001165869.1| cyclin Dx [Danio rerio]
gi|257124410|gb|ACV41905.1| cyclin Dx [Danio rerio]
Length = 297
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 59 LALNYFDRFISKH-TLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
LA++ DR++S +LP V + AA C+++A K+ + +D +
Sbjct: 85 LAVSLLDRYLSATLSLP-----VSPSCLAAA--CILLASKVTESDTVSADTLCAAAEYDF 137
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKG-------IKRRHVNRI 166
S + ME +L L W AV +F+P FL + G RRH + +
Sbjct: 138 LSANLREMERVVLATLRWDVLAVTPQDFIPLFLRTLGELRDGDGHTGDFLTTMRRHGDTL 197
Query: 167 IIEAQADLSFASCKPSVIAAAAL 189
+ D F PS++AAAAL
Sbjct: 198 VAMCVCDSRFLGTPPSLVAAAAL 220
>gi|224056264|ref|XP_002298782.1| predicted protein [Populus trichocarpa]
gi|159025703|emb|CAN88852.1| D1-type cyclin [Populus trichocarpa]
gi|222846040|gb|EEE83587.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 25/127 (19%)
Query: 59 LALNYFDRFISKHTLPE-----VLGNVEDDLVLAA-----NCCLIIAWKLRDQSFSFSDF 108
L++NYFDRF+S ++LPE L +V L LAA + L++ ++ + F F
Sbjct: 16 LSVNYFDRFLSSYSLPENGWPFQLLSVA-CLSLAAKMEEPDVPLLLDLQILEPGFIFE-- 72
Query: 109 MAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-ISSAKGIKRRHVNRII 167
P+N K MEL+++ L WR R+ +++ +F++ + S K + +R +
Sbjct: 73 ------PKNIQK----MELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDR-V 121
Query: 168 IEAQADL 174
++ ADL
Sbjct: 122 LKKSADL 128
>gi|388242710|gb|AFK15625.1| cyclin D1 [Eleutherodactylus coqui]
Length = 291
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 39/193 (20%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE PAA Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 33 EETCCPAANYFKCVQKEVL-PYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEP 91
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI--- 129
L + + L L C+ +A K+++ +P K + + I
Sbjct: 92 LKK------NRLQLLGATCMFLASKMKE------------TIPLTAEKLCIYTDNSIRPE 133
Query: 130 ---------LNGLEWRSRAVVAVNFVPFFLNISS----AKGIKRRHVNRIIIEAQADLSF 176
LN L+W +V +F+ FL+ S K I R+H + D+ F
Sbjct: 134 ELLIMELLILNKLKWDMASVTPHDFIEHFLDKMSLTDDTKQIIRKHAQTFVALCATDVKF 193
Query: 177 ASCKPSVIAAAAL 189
S PS+IAA ++
Sbjct: 194 ISNPPSMIAAGSV 206
>gi|431910161|gb|ELK13234.1| G1/S-specific cyclin-D1 [Pteropus alecto]
Length = 296
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L MEL +
Sbjct: 91 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W A+ +F+ FL+ K I R+H + D+ F S PS+
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATDVKFISNPPSM 202
>gi|33772250|gb|AAQ54560.1| cyclin D3 [Malus x domestica]
Length = 213
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV--LAANCCLI 93
R A+ +L+ + +A LA +YFD F+S L VE + LAA C+
Sbjct: 46 RREAVDWMLRVASHYSFSALSAVLAADYFDGFLSSLQL-----QVEKPWMTQLAAVACIS 100
Query: 94 IAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI 152
+A K+ + Q DF ++ ++ ME+ +L+ L+W+ V ++F+ + I
Sbjct: 101 LAAKVEETQVPLLLDFQVEDSKYVFEARTIKRMEILVLSTLQWKMNPVTPISFIDY---I 157
Query: 153 SSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+ G+K + +++ +D F S PSV+A A ++HV
Sbjct: 158 TRRLGLKNHLCWEVLKRCELVLLSLISDSRFMSFLPSVVATAIMLHV 204
>gi|224010207|ref|XP_002294061.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970078|gb|EED88416.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 492
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 59 LALNYFDRFISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
+A++ DRFIS + ++ + LV+ ++ L IA KL ++ SDF A L
Sbjct: 75 IAMDIVDRFISNQSAYVAQRALVCRWQYQLVVVSS--LFIAVKLNERVIVESDFFAS--L 130
Query: 115 PRN-YSKHAL-NMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR------- 165
R Y + ME+ IL GL WR A ++ V + L++ S+ HVN+
Sbjct: 131 CRGLYGIDEIEKMEMHILQGLTWRMNAPTSIQMVHYILSLVSS------HVNQLDEHAWT 184
Query: 166 -IIIEAQA-------DLSFASCKPSVIAAAALVHVCKLLLRDE 200
I+ EA+ D F++ + S IA A++V+ ++L +++
Sbjct: 185 FILDEARYQTEHAVRDYYFSTQRSSTIAVASIVNAIEMLKKED 227
>gi|148234534|ref|NP_001079474.1| G1/S-specific cyclin-D1 b [Xenopus laevis]
gi|27694633|gb|AAH43758.1| MGC52909 protein [Xenopus laevis]
gi|76780028|gb|AAI06632.1| MGC52909 protein [Xenopus laevis]
Length = 291
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 39/193 (20%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE S P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 33 EETSCPSVSYFKCVQKEVL-PNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEP 91
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI--- 129
L + L L C+ +A K+++ +P K + + I
Sbjct: 92 LRK------SRLQLLGATCMFLASKMKE------------TIPLTAEKLCIYTDNSIRPD 133
Query: 130 ---------LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSF 176
LN L+W +V +F+ FLN K I R+H + D+ F
Sbjct: 134 ELLLMELLILNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDVKF 193
Query: 177 ASCKPSVIAAAAL 189
S PS+IAA ++
Sbjct: 194 ISNPPSMIAAGSV 206
>gi|405959930|gb|EKC25904.1| G1/S-specific cyclin-D2 [Crassostrea gigas]
Length = 291
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
E++ MP+ Y + + ++R + +L+ + + + LA+NY DRF++
Sbjct: 31 LQTEDRYMPSPTYFSCVQTDIKPYMRKMVAQWMLEVCEEQQCEEEVFPLAMNYMDRFLTV 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQI 129
+P L L C+ +A KL++ + S+ + R+ + L MEL +
Sbjct: 91 VDIPRT------RLQLLGAVCMFLASKLKETNPLTSEKLVIYT-DRSITLEELTEMELFV 143
Query: 130 LNGLEWRSRAVVAVNFVPFFLN-ISSAK---GIKRRHVNRIIIEAQADLSFASCKPSVIA 185
L+ L+W AV +F+ L+ I + + + ++H I D F + PS+IA
Sbjct: 144 LSKLKWDLSAVTPHDFLEQILSRICTDQERCNVIKKHSQTFIALCSTDCKFINYPPSMIA 203
Query: 186 AAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
A ++ LL+ +N + +SL +D D L S
Sbjct: 204 AGSVGAAAHGLLKTDNT------KLLQSLHQILNIDVDCLKS 239
>gi|395851596|ref|XP_003798339.1| PREDICTED: G1/S-specific cyclin-D1 [Otolemur garnettii]
Length = 295
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L MEL +
Sbjct: 91 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W A+ +F+ FL+ K I R+H + D+ F S PS+
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSM 202
>gi|356498000|ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
Length = 339
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 17/186 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLAL 61
D N P F + +S+ A+ R ++ IL+ YL++
Sbjct: 54 DERNFVPGFEYLNRFQSRSLDASA----------REESVAWILKVQAYYAFQPVTAYLSV 103
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSK 120
NY DRF++ LP L+ A CL +A K+ + S D K
Sbjct: 104 NYLDRFLNSRPLPPKTNGWPLQLLSVA--CLSLAAKMEESLVPSLLDLQVEGAKYVFEPK 161
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSF 176
MEL +L L+WR R+V +F+ FF + + G +II+ + SF
Sbjct: 162 TIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASF 221
Query: 177 ASCKPS 182
+ PS
Sbjct: 222 LAYWPS 227
>gi|443702166|gb|ELU00327.1| hypothetical protein CAPTEDRAFT_54530, partial [Capitella teleta]
Length = 285
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 17 EEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
E+K P+ Y + + ++R +L+ + K + L++NY DRF+S
Sbjct: 25 EDKYQPSPSYFQCVQTDIQPYMRKMVAAWMLEVCEEQKCEEEVFPLSMNYLDRFLS---- 80
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNME------L 127
V+ L L + C+ IA KL++ + ++ L Y+ ++ ME L
Sbjct: 81 --VVNIKRTQLQLLGSVCMFIASKLKE-----TIPLSAEKL-VTYTDRSITMEELMEWEL 132
Query: 128 QILNGLEWRSRAVVAVNFVPFFL-----NISSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
IL L+W AV +F+ L + SA+ IKR H + I+ D F PS
Sbjct: 133 IILRVLKWDISAVTPHDFIAQILTRLPLDSESARTIKR-HAHTFIVLCATDYKFIMYTPS 191
Query: 183 V 183
+
Sbjct: 192 M 192
>gi|307204644|gb|EFN83266.1| G1/S-specific cyclin-E [Harpegnathos saltator]
Length = 549
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD------QSFSFSDFMAG 111
YLA++Y DRF+S H L ++ L L CL IA K+ + F++ A
Sbjct: 267 YLAMDYIDRFLSIH-----LNVPKNQLQLIGITCLFIASKVEEIYPPKIAEFAYVTDGAC 321
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSA-------------KGI 158
+ L EL IL GL W + A ++ ++ I S G+
Sbjct: 322 TE------EEILGQELVILKGLGWNLSPITAPGWLNIYMQIESGDWSRPNTFIYPQYGGL 375
Query: 159 KRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+ +++ A D S S IAAAA+ H
Sbjct: 376 QYCQAAQLLDLATLDESSLKFPYSHIAAAAIYHT 409
>gi|297797653|ref|XP_002866711.1| CYCD3_2 [Arabidopsis lyrata subsp. lyrata]
gi|297312546|gb|EFH42970.1| CYCD3_2 [Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRN 117
LA+NYFDRF++ L + L A L +A K+ + Q D
Sbjct: 119 LAVNYFDRFMTSIKLQTDKPWMSQ---LVAVASLSLAAKVEEIQVPLLLDLQVEEARYVF 175
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR----RHVNRIIIEAQAD 173
+K MEL IL+ L+WR V ++F + +K ++ R R++I AD
Sbjct: 176 EAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFFRKCERLLISVIAD 235
Query: 174 LSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSL-DSFCTML 232
+ F S PSV+A A + V E + D + ++ V+++ + + + +L
Sbjct: 236 MRFMSYFPSVLATAIMFFVI------EELKPCDEVEYQSQIMTLLKVNQEKVNECYELLL 289
Query: 233 DHMCCRKKMFQEINEEFLSDVGGF 256
+H +K+M ++++ S V F
Sbjct: 290 EHNPSKKRMMNLLDQDSPSGVLDF 313
>gi|126631999|gb|AAI34247.1| LOC567411 protein [Danio rerio]
Length = 323
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 59 LALNYFDRFISKH-TLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
LA++ DR++S +LP V + AA C+++A K+ + +D +
Sbjct: 111 LAVSLLDRYLSATLSLP-----VSPSCLAAA--CILLASKVTESDTVSADTLCAAAEYDF 163
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFL----NISSAKG-------IKRRHVNRI 166
S + ME +L L W AV +F+P FL + G RRH + +
Sbjct: 164 LSANLREMERVVLATLRWDVLAVTPQDFIPLFLRTLGELRDGDGHTGDFLTTMRRHGDTL 223
Query: 167 IIEAQADLSFASCKPSVIAAAAL 189
+ D F PS++AAAAL
Sbjct: 224 VAMCVCDSRFLGTPPSLVAAAAL 246
>gi|356502065|ref|XP_003519842.1| PREDICTED: cyclin-D4-1 [Glycine max]
Length = 230
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 51 KRNAYIPY------LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS 104
K ++Y+ + LA+NY DRF+S LP V + L A CL IA K+ +
Sbjct: 107 KAHSYLGFGPLSFCLAVNYLDRFLSVFELPR---GVSWTVQLLAVACLSIAAKMEEIKVP 163
Query: 105 FS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
S D G ++ MEL +L+ L W+ A+ +F+ +FL
Sbjct: 164 QSVDLQVGELKFLFEARTIQKMELLVLSTLRWKMCAITPCSFIDYFLG 211
>gi|259013496|ref|NP_001158492.1| cyclin D [Saccoglossus kowalevskii]
gi|197734689|gb|ACH73240.1| cyclin D protein [Saccoglossus kowalevskii]
Length = 289
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 19/218 (8%)
Query: 17 EEKSMPAAGYA--YINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLP 74
E+K P+ GY + +F+R +L+ + + + L++NY DRF+S
Sbjct: 40 EDKYTPSFGYFKWQTDLKDFMRKMVATWMLEVCEEQQCEEEVFTLSMNYVDRFLS----- 94
Query: 75 EVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLE 134
V + L L C+ +A KL++ ++ + L+MEL +L L+
Sbjct: 95 -VTQMKKKYLQLLGAACMFLASKLKETLPLTAEKLCIYTDHSITCDELLDMELLVLTKLK 153
Query: 135 WRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL- 189
W AV +F+ L+ + ++H I D FA PS+IAA ++
Sbjct: 154 WDLSAVTPHDFLEQILSRLPLDKDNSDVVKKHSRTFIALCATDYRFAVYPPSMIAAGSIG 213
Query: 190 --VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSL 225
+H L D + + E L T +D D L
Sbjct: 214 AAIHG----LNDVHSQCKSYTNITERLQTITAIDSDCL 247
>gi|194211581|ref|XP_001494202.2| PREDICTED: LOW QUALITY PROTEIN: g1/S-specific cyclin-D2-like [Equus
caballus]
Length = 289
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 13/219 (5%)
Query: 16 VEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
+EE+ +P Y + + ++R +L+ + K + +NY DRF++
Sbjct: 33 IEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPFGMNYLDRFLAGVP 92
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
P+ L L C+ +A KL++ ++ + + L EL +L
Sbjct: 93 TPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGK 146
Query: 133 LEWRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAA 188
L+W AV +F+ L + + R+H I D FA PS+IA +
Sbjct: 147 LKWNLAAVTPHDFIEHILRKLPQPNDKLPLIRKHAQTFIALCATDFKFAMYPPSMIATGS 206
Query: 189 LVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
+ L +DE+ + L T D D L +
Sbjct: 207 VGAAICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKA 245
>gi|359359240|gb|AEV41138.1| D7-type cyclin [Populus x canadensis]
Length = 356
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 13 YFDVEEKSMPAAGYA-YINEANFL--RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS 69
Y + E MP GY ++ N L R RAI+ ++++ + + A NY DRF+S
Sbjct: 51 YLEKEFTCMPEPGYLEHLRTKNLLSARLRAIQWLIKSRQRLSLPFETVFNAANYLDRFMS 110
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALN-MELQ 128
+ + + L +A CL +A K + + +L ++ + MEL
Sbjct: 111 MNQCHGWKCWMVELLCVA---CLSVASKFTETRTPCLHDIQMEDLDHSFQPITIQRMELV 167
Query: 129 ILNGLEWRSRAVVAVNFVPF------FLNISS--AKGIKRRHVNRIIIEAQADLSFASCK 180
+L L WR + A ++V FL S K + V +++ A D S +
Sbjct: 168 LLRALGWRLGSTTAYSYVELLMMEIDFLKSYSYLQKDLVACRVTELLLGAMQDCSMVGFR 227
Query: 181 PSVIAAAAL 189
PS+ A +AL
Sbjct: 228 PSITAISAL 236
>gi|224010205|ref|XP_002294060.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970077|gb|EED88415.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 297
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 59 LALNYFDRFISKHTLPE----VLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
+A++ DRFIS + + ++ + LV+A++ L IA KL ++ SDF A L
Sbjct: 75 IAMDIVDRFISNQSAYDAQRALVCRWQYQLVVASS--LFIAVKLNERVIVESDFFAS--L 130
Query: 115 PRNYSK--HALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR------- 165
R + ME+ IL GL WR A ++ V + L++ S+ HVN+
Sbjct: 131 CRGLYRIDEIEKMEMHILQGLTWRMNAPTSIQMVHYILSLVSS------HVNQLDERVWT 184
Query: 166 -IIIEAQA-------DLSFASCKPSVIAAAALVHVCKLLLRDE 200
I+ EA+ D ++ + S IA A++V+ ++L +++
Sbjct: 185 FILDEARYQTEHAVRDYYLSTQRSSTIAVASIVNAIEMLKKED 227
>gi|242036569|ref|XP_002465679.1| hypothetical protein SORBIDRAFT_01g043610 [Sorghum bicolor]
gi|241919533|gb|EER92677.1| hypothetical protein SORBIDRAFT_01g043610 [Sorghum bicolor]
Length = 355
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ I++ + + + Y+A+ Y DRF+++ + E L L A CL +A
Sbjct: 89 RSGCVRWIIKTTATFRCGGKTAYVAVTYLDRFLAQRRVNR---RQEWALQLLAVACLSLA 145
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
K+ +Q S+F + S L MEL +L+ LEWR AV +++ F
Sbjct: 146 IKMEEQHAPRLSEFRV--DAYEFDSASILRMELFVLSTLEWRMNAVTPFSYISCF 198
>gi|114053227|ref|NP_001039738.1| G1/S-specific cyclin-D1 [Bos taurus]
gi|109820070|sp|Q2KI22.1|CCND1_BOVIN RecName: Full=G1/S-specific cyclin-D1
gi|86438382|gb|AAI12799.1| Cyclin D1 [Bos taurus]
gi|296471349|tpg|DAA13464.1| TPA: G1/S-specific cyclin-D1 [Bos taurus]
Length = 295
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L+MEL +
Sbjct: 91 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLHMELVL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W A+ +F+ FL+ K I R+H + D+ F S PS+
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATDVKFISNPPSM 202
>gi|449451605|ref|XP_004143552.1| PREDICTED: cyclin-D2-1-like [Cucumis sativus]
gi|449527834|ref|XP_004170914.1| PREDICTED: cyclin-D2-1-like [Cucumis sativus]
Length = 366
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRN 117
L++NY DRF+S + LP + + L + C+ +A K+ + D
Sbjct: 113 LSMNYLDRFLSVYHLP---MDKSWTVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVF 169
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAK-----GIKRRHVNRIIIEAQA 172
+K MEL +L+ L+W+ +A+ +F+ +FL+ S + + +++I+
Sbjct: 170 EAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPNLYFSKSSQLILSTIK 229
Query: 173 DLSFASCKPSVIAAAALVHVCK 194
+ F KPS IA A + + +
Sbjct: 230 GIDFLEFKPSEIALAVAISISR 251
>gi|426353129|ref|XP_004044051.1| PREDICTED: G1/S-specific cyclin-D3 isoform 3 [Gorilla gorilla
gorilla]
Length = 211
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 61 LNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYS 119
+NY DR++S + + L L C+++A KLR+ + + Y+
Sbjct: 1 MNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI-------YT 47
Query: 120 KHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIE 169
HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 48 DHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLAL 107
Query: 170 AQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 108 CATDYTFAMYPPSMIATGSI 127
>gi|413920138|gb|AFW60070.1| hypothetical protein ZEAMMB73_585763 [Zea mays]
Length = 431
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 60 ALNYFDRFISKHT-LPEVLGNVEDDLVLAANCCLIIAWKLRD------QSFSFSDFMAGN 112
A+NY DRF+S + L VE L + CL IA KL + + M+ +
Sbjct: 125 AVNYLDRFLSINCHLRWEAWMVE----LVSVACLSIACKLDEVNIPSLHHLQMEEVMSHS 180
Query: 113 NLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQA 172
LP +MEL +L L+WR V +F+ LN R++I + A
Sbjct: 181 FLPATVR----DMELTLLKALQWRLACVTPYSFLLPLLNTPPHTAAWTSRCTRLLIRSLA 236
Query: 173 DLSFASCKPSVIAAAAL 189
+ F SVIA++AL
Sbjct: 237 EPLFIQFDASVIASSAL 253
>gi|351707917|gb|EHB10836.1| G1/S-specific cyclin-D3 [Heterocephalus glaber]
Length = 211
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 61 LNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYS 119
+NY DR++S + + L L C+++A KLR+ + + Y+
Sbjct: 1 MNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI-------YT 47
Query: 120 KHALN------MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIE 169
HA++ E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 48 DHAVSPRQMREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLAL 107
Query: 170 AQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 108 CATDYTFAMYPPSMIATGSI 127
>gi|441648782|ref|XP_004090908.1| PREDICTED: G1/S-specific cyclin-D3 [Nomascus leucogenys]
Length = 211
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 61 LNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYS 119
+NY DR++S + + L L C+++A KLR+ + + Y+
Sbjct: 1 MNYLDRYLS------CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI-------YT 47
Query: 120 KHAL------NMELQILNGLEWRSRAVVAVNFVPFFLNISSA----KGIKRRHVNRIIIE 169
HA+ + E+ +L L+W AV+A +F+ L+ S + + ++H +
Sbjct: 48 DHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLAL 107
Query: 170 AQADLSFASCKPSVIAAAAL 189
D +FA PS+IA ++
Sbjct: 108 CATDYTFAMYPPSMIATGSI 127
>gi|356536190|ref|XP_003536622.1| PREDICTED: cyclin-D3-1-like isoform 1 [Glycine max]
Length = 402
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ +L+ + +A LA+ Y DRF+ S H E ++ L A C+ +
Sbjct: 122 RREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQ----LVAVTCISL 177
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q D + +K MEL +L+ L+W+ V ++F+ +I
Sbjct: 178 AAKVEETQVPLLLDLQVQDTKYLFEAKTIQRMELLVLSTLKWKMHPVTPLSFLD---HII 234
Query: 154 SAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G++ R +++ D F C PSV+A A ++HV
Sbjct: 235 RRLGLRTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHV 280
>gi|327271195|ref|XP_003220373.1| PREDICTED: LOW QUALITY PROTEIN: g1/S-specific cyclin-D3-like
[Anolis carolinensis]
Length = 294
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 17 EEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
EE+ P A Y + ++R +L+ + K + LA+NY DR++S
Sbjct: 34 EERYSPRASYFQCVQKEIQPYMRKMLASWMLEVCEEQKCEEEVFPLAMNYVDRYLS---- 89
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
+ ++ L L C+++A KLR+ + + + L+ E +L L
Sbjct: 90 --CVSTRKNHLQLLGAVCMLLASKLRETTPLSVEKLCIYTDNSITPCEVLDWECLVLEKL 147
Query: 134 EWRSRAVVAVNFVPFFLN---ISSAK-GIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL 189
+W AV+A +F+ L + K + ++H I D +FA PS+IA ++
Sbjct: 148 KWDLVAVIANDFLDHILQRLPLPQHKVDLVKKHAQTFIALCATDYTFAMYPPSMIATGSI 207
>gi|3582735|gb|AAC35273.1| cyclin D [Caenorhabditis elegans]
Length = 405
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 19/229 (8%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDR 66
F + EE P Y + N F R +AI I +K + + LA++ DR
Sbjct: 76 FYNCMEYEEALQPNYHYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDR 135
Query: 67 FISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR---DQSFSFSDFMAGNNLPRNYSKHAL 123
F+S + ++ D+ + A L IA KL+ + S + + N+ P + L
Sbjct: 136 FMSVQNI------LKHDIQMIAGVALFIASKLKAPHPMTASKIAYYSDNSCPIDM---IL 186
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
EL I+ L+W + + A +F F + R ++ + Q A+ PS+
Sbjct: 187 QWELLIVTTLQWETESPTAFSFFNFLASRIPQIHNTRGDFQTVVQKCQKMHKLATLFPSM 246
Query: 184 IAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDSFCTML 232
A L +V L +N E A + ++ L + ++ + LDS+ M+
Sbjct: 247 QCAIGLYYVSN--LPTQNKEL--AVKIKDLLANMFQLEVNLLDSYIPMV 291
>gi|17537051|ref|NP_496763.1| Protein CYD-1 [Caenorhabditis elegans]
gi|3880866|emb|CAA21630.1| Protein CYD-1 [Caenorhabditis elegans]
Length = 405
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N F R +AI I +K + + LA++ DRF+S + ++ D+ + A
Sbjct: 99 NITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNI------LKHDIQMIAG 152
Query: 90 CCLIIAWKLR---DQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFV 146
L IA KL+ + S + + N+ P + L EL I+ L+W + + A +F
Sbjct: 153 VALFIASKLKAPHPMTASKIAYYSDNSCPIDM---ILQWELLIVTTLQWETESPTAFSFF 209
Query: 147 PFFLNISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPD 206
F + R ++ + Q A+ PS+ A L +V L +N E
Sbjct: 210 DFLASRIPQIHNMRGDFQTVVQKCQKMHKLATLFPSMQCAIGLYYVSN--LPTQNKEL-- 265
Query: 207 AKRCRESLIDSTYVDEDSLDSFCTML 232
A + ++ L + ++ + LDS+ M+
Sbjct: 266 AVKIKDLLANMFQLEVNLLDSYIPMV 291
>gi|4160302|emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum]
Length = 367
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+R A+ +L+ A LA+NYFDRF+S + + LAA CL I
Sbjct: 90 VRKEALDWMLRVIAHYGFTAMTAVLAVNYFDRFVSGLCFQKDKPWMSQ---LAAVACLSI 146
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN-- 151
A K+ + Q D ++ +K MEL +L+ L+W+ V ++F+ +
Sbjct: 147 AAKVEETQVPLLLDLQVADSRFVFEAKTIQRMELLVLSTLKWKMNPVTPLSFIDHIMRRF 206
Query: 152 --ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+++ R R+I+ D PSVIA A + V
Sbjct: 207 GFMTNLHLDFLRRCERLILGIITDSRLLHYPPSVIATAVVYFV 249
>gi|327259769|ref|XP_003214708.1| PREDICTED: g1/S-specific cyclin-D1-like [Anolis carolinensis]
Length = 153
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCK 180
MEL ++N L+W A+ +F+ FLN +K I R+H + D+ F S
Sbjct: 1 MELLLVNKLKWNLAAMTPHDFIEHFLNKMPVAEDSKQIIRKHAQTFVALCATDIKFISNP 60
Query: 181 PSVIAAAALV 190
PS+IAA ++V
Sbjct: 61 PSMIAAGSVV 70
>gi|326534076|dbj|BAJ89388.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 349
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 34 FLRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCC 91
FL+ R A+K ILQ YLA+ YFDRF + + L+ A C
Sbjct: 84 FLQARLAAVKWILQTRGCFGFGHRTAYLAIAYFDRFFLRRRVDRAAMPWAARLLSVA--C 141
Query: 92 LIIAWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
+ +A K+ + + S+ AG S MEL +L+ L WR AV +++P F
Sbjct: 142 VSVAAKMEEYCAPALSELDAGGGY-EFCSASVRRMELLVLSTLGWRMAAVTPFDYLPCF 199
>gi|301622045|ref|XP_002940348.1| PREDICTED: g1/S-specific cyclin-D2 [Xenopus (Silurana) tropicalis]
Length = 284
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ + L L C+ +A KL++ ++ +
Sbjct: 73 LAMNYLDRFLA------VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 126
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADL 174
+ L EL +L L+W AV +F+ L K R+H I D
Sbjct: 127 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKEKLLLIRKHAQTFIALCATDF 186
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRD 199
+FA PS+IA ++ +C L L D
Sbjct: 187 NFAMYPPSMIATGSVGAAICGLQLDD 212
>gi|15240257|ref|NP_201527.1| cyclin-D3-2 [Arabidopsis thaliana]
gi|75309063|sp|Q9FGQ7.1|CCD32_ARATH RecName: Full=Cyclin-D3-2; AltName: Full=G1/S-specific cyclin-D3-2;
Short=CycD3;2
gi|9759275|dbj|BAB09645.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|17065138|gb|AAL32723.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|20259812|gb|AAM13253.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|21593133|gb|AAM65082.1| cyclin D3-like protein [Arabidopsis thaliana]
gi|332010938|gb|AED98321.1| cyclin-D3-2 [Arabidopsis thaliana]
Length = 367
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ +L+ + LA+NYFDRF++ L + L A L +A
Sbjct: 96 RKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQ---LVAVASLSLA 152
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D +K MEL IL+ L+WR V ++F +
Sbjct: 153 AKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFG 212
Query: 155 AKGIKR----RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+K ++ R R++I AD F PSV+A A ++ V
Sbjct: 213 SKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILV 254
>gi|162956919|gb|ABY25838.1| D-type cyclin family 3 subgroup 1 [Solanum tuberosum]
Length = 363
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDD---LVLAANCC 91
+R A+ +L+ A LA++YFDRF+S L +D + LAA C
Sbjct: 93 VRKEALDWMLRVIGYYGFTATTAVLAVSYFDRFVSG------LXFQKDKPWMIQLAAVAC 146
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL 150
L IA K+ + Q D ++ +K MEL +L+ L+W+ V ++F+ +
Sbjct: 147 LSIAAKVEETQVPLLLDLQVADSKFVFEAKTIQRMELLVLSTLKWKMNLVTPLSFIDHIM 206
Query: 151 N----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+++ + R+I++ D PSVIA A++ +V
Sbjct: 207 RRFGFMTNLHLDFLKKCERLILDIITDSRLLHYPPSVIATASMFYV 252
>gi|223945973|gb|ACN27070.1| unknown [Zea mays]
gi|414865359|tpg|DAA43916.1| TPA: cyclin delta-3 isoform 1 [Zea mays]
gi|414865360|tpg|DAA43917.1| TPA: cyclin delta-3 isoform 2 [Zea mays]
Length = 345
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ I++ + Y+A+ Y DRF+ + + GN E L L CL +A
Sbjct: 90 RSGCVRWIIKTTAMFGFGGKTAYVAVTYLDRFLVQRRVNR--GN-EWALRLLTVACLSLA 146
Query: 96 WKLRDQ-SFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LN 151
KL ++ + S+F + S L MEL +L LEWR AV ++ +F
Sbjct: 147 IKLEEEHAPRLSEFPLDED--EFDSASILRMELLVLGTLEWRMIAVTPFPYISYFAARFR 204
Query: 152 ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
+ I R V + A +S +PS IA A+++
Sbjct: 205 EDERRAILMRAVE-CVFAAIKVISSVEYRPSTIAVASIL 242
>gi|374533610|gb|AEZ53718.1| cyclin D2, partial [Scaphiopus couchii]
Length = 230
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ + L L C+ +A KL++ ++ +
Sbjct: 18 LAMNYLDRFLA------VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 71
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADL 174
L EL +L L+W AV +F+ L K R+H I D
Sbjct: 72 PHELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPMPQDKLLMVRKHAQTFIALCATDF 131
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
+FA PS+IA ++ +C L L D+ E L T D D L +
Sbjct: 132 NFAMYPPSMIATGSVGAAICGLQL-DDGESSLSGDNLTEHLAKXTSTDVDCLKA 184
>gi|308081905|ref|NP_001183064.1| uncharacterized protein LOC100501413 [Zea mays]
gi|238009154|gb|ACR35612.1| unknown [Zea mays]
gi|414877866|tpg|DAA54997.1| TPA: hypothetical protein ZEAMMB73_327538 [Zea mays]
Length = 349
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+K IL+ YLA+ YFD F+ + + L+ A C+ +A
Sbjct: 94 RLAAVKWILETRGCFGFGHRTAYLAIAYFDSFLLRRRVDREAMPWAAQLLSVA--CVSVA 151
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVPFF 149
K+ + Q + S+F AG ++ ++ MEL +L+ L WR AV ++F+P F
Sbjct: 152 AKMEECQVPALSEFHAGG---YDFDSASIRRMELLVLSTLGWRMGAVTPLDFLPCF 204
>gi|327281490|ref|XP_003225481.1| PREDICTED: g1/S-specific cyclin-E1-like [Anolis carolinensis]
Length = 397
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
Query: 28 YINEANFLRPRAIKVILQN-----SKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED 82
Y+ L+P+ ++VIL + + K + YLA ++FDR+++ H V+
Sbjct: 124 YMQRHPLLQPK-MRVILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATHQ-----NVVKT 177
Query: 83 DLVLAANCCLIIAWKLRDQSF-----SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRS 137
L L L IA K R++ + F+ G + LNMEL I+ L+W
Sbjct: 178 LLQLIGISSLFIAAK-REEIYPPKLCQFAYVTDGACT----EEEILNMELLIMKALDWHL 232
Query: 138 RAVVAVNFVPFFLNISSAKGIKR----RHVNRIIIEAQA-------DLSFASCKPSVIAA 186
+ V+++ +L I+ I + +I ++ D+ SV+AA
Sbjct: 233 SPLTVVSWLNIYLQIAYLNEIYEMLLPHYPQQIFVQIAMLLDLCVLDIGCLGYTYSVLAA 292
Query: 187 AALVHV--CKLLLRDENGERPDAKRCRESLI 215
+AL H C+L+ R E D + C + ++
Sbjct: 293 SALYHFSSCELMQRVSGYEFSDIEDCVKWMV 323
>gi|20384779|gb|AAK54466.1| cyclin D3 [Helianthus annuus]
Length = 308
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A+ IL+ + LA+NY DRF+S + N + L A CL +A
Sbjct: 75 RKEAVDWILKVKGCHGFTPLTAILAINYLDRFLSSLHFQK--ANTPWMIHLVAVTCLSLA 132
Query: 96 WKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+++ D + +K+ EL +++ L+WR V ++F+ +I
Sbjct: 133 AKIQETHVPLLLDLQLEESKFLFEAKNIQKTELLVMSTLKWRMNLVTPISFLD---HIVR 189
Query: 155 AKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+ + +I+ AD F KPSV+A A ++ V
Sbjct: 190 RLGLSNHLHWDFFKKCEAMILYLVADSRFVCYKPSVLATATMLCV 234
>gi|357465613|ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula]
gi|355492139|gb|AES73342.1| Cyclin D3-1 [Medicago truncatula]
gi|388511523|gb|AFK43823.1| unknown [Medicago truncatula]
Length = 348
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 10/164 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +I+ IL+ + +A LA+NY DRF+ + LAA CL +A
Sbjct: 85 RRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQ---LAAVACLSLA 141
Query: 96 WKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + D + +K ME+ IL+ L W+ ++F+ F +
Sbjct: 142 AKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLGWKMNPATPLSFIDFIIRRLG 201
Query: 155 AKG------IKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
K +R ++ ++D F S PSV+A A +VHV
Sbjct: 202 LKDHLICWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATATMVHV 245
>gi|296087323|emb|CBI33697.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 20 SMPAAGYAYINEANFLRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVL 77
+M + + N++ R R +IK +L YL + YFD F+S+ ++
Sbjct: 60 TMSSDNRSITNQSWLKRARLDSIKWVLNTRAFFGFQYRTAYLCVAYFDLFLSRRSIDNER 119
Query: 78 GNVEDDLVLAANCCLIIAWKLRD------QSFSFSDFMAGNNLPRNYSKHALNMELQILN 131
L +A CL +A K+ + F + N + R MEL +L
Sbjct: 120 FWATGLLSVA---CLSLAAKMEELRVPNLSEFPVEGYYFDNKVIRR-------MELMVLE 169
Query: 132 GLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
LEW+ ++ +F+P F+N + + V+R +++ +++ +PSVI
Sbjct: 170 TLEWKMLSITPFDFIPCFINKFCGESKSKELVSRTMELLLAITREVNLMDHRPSVI 225
>gi|348529220|ref|XP_003452112.1| PREDICTED: G1/S-specific cyclin-D2-like [Oreochromis niloticus]
Length = 294
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+E++ +P Y + + ++R + + + K N + LA+NY DRF++
Sbjct: 31 LTIEDRFLPQCSYFQRVQKDIQPYMRRMVAGWMHEVCEEEKSNEDVFPLAINYLDRFLA- 89
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQIL 130
V+ + L L C+ +A KL+D ++ + + L+ EL +L
Sbjct: 90 -----VMPTRKSYLQLLGAVCMFLASKLKDCKPISAEKLCMYTDNSFSPRELLDWELVVL 144
Query: 131 NGLEWRSRAVVAVNFVPFF---LNISSAKGIK-RRHVNRIIIEAQADLSFASCKPSVIAA 186
L+W +V+ +FV L + K + R+H I D A PS+IA+
Sbjct: 145 GKLKWNMASVIPNDFVEHIIRRLPLPKEKVVMVRKHTQTFIALCATDDRLAMNPPSMIAS 204
Query: 187 AAL-VHVCKLLLRDENGERPDAKRCRESLID 216
++ +C L L + D + R++L D
Sbjct: 205 GSMGAAICGLQL-----DHTDQRLSRDNLTD 230
>gi|255581492|ref|XP_002531552.1| cyclin d, putative [Ricinus communis]
gi|223528813|gb|EEF30818.1| cyclin d, putative [Ricinus communis]
Length = 349
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 17 EEKSMPAAGY-AYINEAN--FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
E MP GY ++ N F R +A++ ++++ + + A NY DRFIS +
Sbjct: 56 ELSYMPQQGYFEHLQSKNLFFARFKAVQWLIKSRSRLNLSFETLFNAANYLDRFISLNKC 115
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDF-MAGNNLPRNYSKHALN-MELQILN 131
E + + L +A CL +A K + +++ S + ++ + + MEL +L
Sbjct: 116 LEWKNWMVELLSVA---CLSVASKFSESTYAPSLLEIQMEDMDHTFQSITIQRMELMLLQ 172
Query: 132 GLEWRSRAVVAVNFVPF----------FLNISSAKGIKRRHVNRIIIEAQADLSFASCKP 181
L WR + ++V FL K + V +I+ D FA +P
Sbjct: 173 ALGWRLGSTTVYSYVELMMMMMVINNDFLKSHLRKDLIVARVTELILGTILDCKFAEFRP 232
Query: 182 SVIAAAAL 189
S+ A +A+
Sbjct: 233 SIAAVSAI 240
>gi|195607198|gb|ACG25429.1| cyclin delta-3 [Zea mays]
Length = 344
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ I++ + Y+A+ Y DRF+ + + GN E L L CL +A
Sbjct: 89 RSGCVRWIIKTTAMFGFGGKTAYVAVTYLDRFLVQRRVNR--GN-EWALRLLTVACLSLA 145
Query: 96 WKLRDQ-SFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LN 151
KL ++ + S+F + S L MEL +L LEWR AV ++ +F
Sbjct: 146 IKLEEEHAPRLSEFPLDED--EFDSASILRMELLVLGTLEWRMIAVTPFPYISYFAARFR 203
Query: 152 ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
+ I R V + A +S +PS IA A+++
Sbjct: 204 EDERRAILMRAVE-CVFAAIKVISSVEYRPSTIAVASIL 241
>gi|2707357|gb|AAC68476.1| cyclin D [Sander vitreus]
Length = 190
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 43 ILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS 102
+L+ + K + LA+NY DRF++ V+ + +L L C+ +A KL++
Sbjct: 2 MLEVCEEQKCGEEVFPLAMNYLDRFLA------VVPTKKCNLQLLGAVCMFLASKLKETR 55
Query: 103 FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAK-GI 158
++ + + L EL +L L+W AV +F+ L + K +
Sbjct: 56 PLTAEKLCIYTDNSIRPQELLEWELVVLGKLKWNLAAVTPNDFIEHIVRRLPLPEDKLAL 115
Query: 159 KRRHVNRIIIEAQADLSFASCKPSVIAAAAL-VHVCKLLL 197
R+HV I D FA PS+IA ++ +C L L
Sbjct: 116 IRKHVQTFIALCATDFRFAMYPPSMIATGSVGAAICGLQL 155
>gi|346321763|gb|EGX91362.1| G1/S-specific cyclin Cln1, putative [Cordyceps militaris CM01]
Length = 407
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 16/177 (9%)
Query: 34 FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLI 93
F+RP I I++ + +L +N DR+ SK + + L L+
Sbjct: 94 FMRPYLIDFIIEAHAAFTLLPETLFLTVNLLDRYCSKRVV------YKHHYQLVGCAALL 147
Query: 94 IAWKLRDQSFSFSDFMAGNNLPRNYSKHAL--NMELQILNGLEWRSRAVVAVNFVPFFLN 151
IA K D+ NN+ + ME+ +LN LEW + V FF
Sbjct: 148 IAAKYGDKKDRVPQITELNNMCCGLYDSGMFTQMEMHVLNTLEW----AIGHPTVDFFTQ 203
Query: 152 ISSAK---GIKRRHVNRIIIE-AQADLSFASCKPSVIAAAALVHVCKLLLRDENGER 204
+ +A+ + H+ + E A F S KPS++A A+L +L R E +R
Sbjct: 204 LMAAEERDDAEVEHMAAYLCEIALYHRDFVSTKPSMMARASLALARAILGRSEVNDR 260
>gi|334332645|ref|XP_003341624.1| PREDICTED: LOW QUALITY PROTEIN: g1/S-specific cyclin-D1-like
[Monodelphis domestica]
Length = 292
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+MEL ++N L+W A+ +F+ FL+ + K I R+H + D+ F S
Sbjct: 139 HMELLLVNKLKWHLAAMTPHDFIEHFLSKMPVLEENKQIIRKHAQTFVALCATDVKFISN 198
Query: 180 KPSVIAAAALV 190
PS+IAA ++V
Sbjct: 199 PPSMIAAGSVV 209
>gi|449450251|ref|XP_004142877.1| PREDICTED: cyclin-D3-2-like [Cucumis sativus]
gi|449525469|ref|XP_004169740.1| PREDICTED: cyclin-D3-2-like [Cucumis sativus]
Length = 359
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R A++ +L+ + +A LA++Y DRF+S + LAA C+ +A
Sbjct: 91 RRTAVEWMLKVNAHYSFSALTAVLAVDYLDRFLSCFHFQRDKPWMSQ---LAAVACISLA 147
Query: 96 WKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
K+ + Q D ++ +K MEL +L+ L+WR V +FV + I+
Sbjct: 148 AKVEETQVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDY---ITR 204
Query: 155 AKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDA 207
G K R I+ + F S PS +A A ++HV K + E P
Sbjct: 205 RLGFKDHMCWEILWQCERTILSVILESDFMSFLPSAMATATMLHVFKAM------EEPHC 258
Query: 208 KRCRES-LIDSTYVDEDSLDSFCTMLDH 234
S L++ +D+ +++ C ++ +
Sbjct: 259 SVDYHSQLLNILGIDKGNVEECCKLISN 286
>gi|225707712|gb|ACO09702.1| G1/S-specific cyclin-D2 [Osmerus mordax]
Length = 294
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR+++ V+ + L L C+ +A KL++ ++ +
Sbjct: 78 LAINYLDRYLA------VVPTRKSYLQLLGAVCIFLASKLKESRPLTTEKLCMYTDNSIT 131
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAK-GIKRRHVNRIIIEAQADL 174
+ L EL +L L+W AV+ +F+ L + K + R+H I D
Sbjct: 132 PREMLEWELVVLGKLKWDMAAVIPNDFIEHIVRRLPLPMDKLAVVRKHTETFIALCATDF 191
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLID 216
S A PS+IA ++ VC L L ++ D R++L D
Sbjct: 192 SLAMNPPSMIATGSVGAAVCGLQL-----DQADKSLSRDNLTD 229
>gi|395545456|ref|XP_003774617.1| PREDICTED: G1/S-specific cyclin-D1, partial [Sarcophilus harrisii]
Length = 154
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
+MEL ++N L+W A+ +F+ FL+ + K I R+H + D+ F S
Sbjct: 1 HMELLLVNKLKWHLAAMTPHDFIEHFLSKMPVLEENKQIIRKHAQTFVALCATDVKFISN 60
Query: 180 KPSVIAAAALV 190
PS+IAA ++V
Sbjct: 61 PPSMIAAGSVV 71
>gi|47497930|dbj|BAD20135.1| putative cyclin A3.1 [Oryza sativa Japonica Group]
Length = 378
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF----------SFSDFM 109
A++YFDRF+S LP E L L + A K DQ S+ +F
Sbjct: 151 AVSYFDRFLSARALPSY---TEHQLSLVGATAVYTAAKYEDQGTVFKLDAREIASYGEFA 207
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-----RHVN 164
+ ++ L ME +++ L +R A FV F S K R RH+
Sbjct: 208 S--------AQEVLAMEREMMAALGYRLGGPNAETFVEHFTRYSKGKEELRVQRLARHIA 259
Query: 165 RIIIEAQADLSFASCKPSVIAAAAL 189
+E+ L + PSV+AAA +
Sbjct: 260 DRSLESYGCLGYL---PSVVAAAVI 281
>gi|449448228|ref|XP_004141868.1| PREDICTED: cyclin-D5-1-like [Cucumis sativus]
Length = 337
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 22 PAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVE 81
PAA +++ +R A++ IL++ + YL+++YFDR +S L +
Sbjct: 75 PAAIQSWLRS---VRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQKRSWIFR 131
Query: 82 DDLVLAANCCLIIAWKLRD-QSFSFSDF-MAGNNLPRNYSKHALNMELQILNGLEWRSRA 139
L A CL +A K+ + ++ S + G ++ SK MEL ILN L WR +
Sbjct: 132 ----LLAVGCLSLAAKMEESKTPKLSSLQVEGFDME---SKAIQRMELYILNTLGWRMSS 184
Query: 140 VVAVNFVPFFLNISSA----KGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
V +++ + + +G+ + + ++ +++ +PS+IAAA+L+
Sbjct: 185 VTPFSYLQYLIRTIFVDYNWQGLLSKAA-KFVMATVKEINLVDHRPSIIAAASLL 238
>gi|355526043|gb|AET05820.1| cyclin D1 [Ovis aries]
Length = 173
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S + + L L C+ +A K+++ ++ +
Sbjct: 1 LAMNYLDRFLSLEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCVYTDNSIR 54
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
L+MEL ++N L+W A+ +F+ FL+ K I R+H + D+
Sbjct: 55 PDELLHMELVLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATDV 114
Query: 175 SFASCKPSV 183
F S PS+
Sbjct: 115 KFISNPPSM 123
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 26/127 (20%)
Query: 80 VEDDLV-LAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYS-KHALNMELQILNGLEWRS 137
V+DDL+ L A CL+IA K ++S + LP N +H ++ ++ +EW
Sbjct: 726 VKDDLLELLAVACLVIAAKQGERS---------SQLPSNADIEHVTGLQAGLVGQMEWNV 776
Query: 138 R--------AVVAVNFVPFFLNISSAKGIKRRHVNRI-------IIEAQADLSFASCKPS 182
R A+ + + +L + + V + + E+ D++F +C+PS
Sbjct: 777 RRVLGNDTAAISTLRCLKLYLERMGCNFLAQETVQSLAGSSFALVTESLTDMAFLNCRPS 836
Query: 183 VIAAAAL 189
VIAAA +
Sbjct: 837 VIAAAVV 843
>gi|54114982|ref|NP_001005757.1| G1/S-specific cyclin-D1 [Canis lupus familiaris]
gi|61211763|sp|Q64HP0.1|CCND1_CANFA RecName: Full=G1/S-specific cyclin-D1
gi|50293077|gb|AAT72919.1| cyclin D1 [Canis lupus familiaris]
Length = 295
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 15/178 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + L P K++ L+ + K + LA+NY +RF+S
Sbjct: 32 LKAEETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLNRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
+ + L L C+ +A K+++ ++ + L MEL +
Sbjct: 91 LEPVKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
+N L+W A+ +F+ FL+ K I R+H + D+ F S PS+
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATDVKFISNPPSM 202
>gi|224105641|ref|XP_002313884.1| predicted protein [Populus trichocarpa]
gi|222850292|gb|EEE87839.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQS----FSFSDFMAGNN 113
YL ++Y DRF+S L ++L L C++IA K + S SF
Sbjct: 64 YLTVSYIDRFLSSQALS------RNNLQLLGVSCMLIASKYEEISPPHVESFCHITDN-- 115
Query: 114 LPRNYSK-HALNMELQILNGLEWRSRAVVAVNFV-PFFLNISSAKGIKRRHVNRIIIEAQ 171
Y+K L+ME Q+L L + A +NF+ FL + ++ + + A+
Sbjct: 116 ---TYTKDQVLDMEKQVLKSLNYEMGAPTTINFLRQVFLKKTGSRLLHLMNSFSFCYLAE 172
Query: 172 ADLSFASCK---PSVIAAAAL----------VHVCKLLLRDENGERP-DAKRCRESLID 216
L C PS+IAA+A+ +H + L+ +G RP D K C ++ D
Sbjct: 173 LSLLEYGCMCFLPSMIAASAVFLSSFTIQPQMHPWSMALQRHSGYRPSDLKECVLAIHD 231
>gi|413909|dbj|BAA03115.1| cyclin D1 [Rattus rattus]
Length = 295
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 8 PDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNY 63
P EE P+ Y + + P K++ L+ + K + LA+NY
Sbjct: 26 PGLRAMLKTEETCAPSVSYFKCVQREIV-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
Query: 64 FDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL 123
DRF+S L + L L C+ +A K+++ ++ + + L
Sbjct: 85 LDRFLSLEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELL 138
Query: 124 NMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASC 179
MEL ++N L+W A+ +F+ FL+ K I R+H + D+ F S
Sbjct: 139 QMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCATDVKFISN 198
Query: 180 KPSVIAAAALV 190
PS++AA ++V
Sbjct: 199 PPSMVAAGSVV 209
>gi|162459779|ref|NP_001105863.1| cyclin D5,2 [Zea mays]
gi|61741624|gb|AAX54698.1| cyclin D5,3B [Zea mays]
Length = 346
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ I++ + Y+A+ Y DRF+ + + GN E L L CL +A
Sbjct: 90 RSGCVRWIIKTTAMFGFGGKTAYVAVTYLDRFLVQRRVNR--GN-EWALRLLTVACLPLA 146
Query: 96 WKLRDQ-SFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISS 154
KL ++ + S+F + S L MEL +L LEWR AV PF L+ ++
Sbjct: 147 IKLEEEHAPRLSEFPLDED--EFDSASILRMELLVLGTLEWRMIAV-----TPFPLHSAN 199
Query: 155 AKGIKRRHVNRIIIEAQADLSFASCK--------PSVIAAAALV 190
R R I+ + FA+ K PS IA A+++
Sbjct: 200 FAARFREDERRAILMRAVECVFAAIKVISSVEYRPSTIAVASIL 243
>gi|159025715|emb|CAN88858.1| D3-type cyclin [Populus trichocarpa]
Length = 347
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 9 DFVKYFDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
+ + F E++ + + + FL R A++ +L+ +A LA NY D
Sbjct: 58 ELLSLFSKEQEQQASVSVNNVADDPFLSRARQEAVEWMLKVIAHYGFSALTSILAFNYLD 117
Query: 66 RFIS-----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYS 119
RF+S + + P ++ L A CL +A K+ + F D + +
Sbjct: 118 RFLSGPCYQRDSRPWMIQ-------LVAVTCLSLAAKVEETHVPFLLDLQVEDTKYVFEA 170
Query: 120 KHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQA 172
K MEL +L+ L+W+ V ++F+ +I G+K R +++ +
Sbjct: 171 KTIQRMELLVLSTLKWKMHPVTPLSFLD---HIIRRLGLKTHVHWEFLRRCEHLLLSVVS 227
Query: 173 DLSFASCKPSVIAAAALVHV 192
D S PSV+A A ++HV
Sbjct: 228 DSRSVSYLPSVLATATMMHV 247
>gi|33517434|gb|AAQ19973.1| cyclin D3-1 [Euphorbia esula]
Length = 350
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 30/203 (14%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV--LAANCCLI 93
R A+ +++ + A LA+N+ DRF+ L E + L A CL
Sbjct: 84 RRDAVDWMMKVNAHYSFTALTSVLAVNFLDRFLFSFDL-----QTEKPWMTQLTAVACLS 138
Query: 94 IAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI 152
+A K+ + Q D ++ +K MEL +L+ L+WR V ++F+ + +
Sbjct: 139 LAAKVEETQVPLLLDLQVVDSKYVFEAKTIQRMELLVLSTLQWRMNPVTPLSFIDY---M 195
Query: 153 SSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLL---LRDE-- 200
+ G K R I++ +D+ F PS IA+A ++HV + L DE
Sbjct: 196 TRRLGFKDYLCWEFIRRCELIVLSIISDMRFIPYLPSEIASAIMLHVINGIEPSLGDEFE 255
Query: 201 -------NGERPDAKRCRESLID 216
++ CRE +I+
Sbjct: 256 TQLFGILGIDKEKVNNCREMIIE 278
>gi|356509773|ref|XP_003523620.1| PREDICTED: cyclin-D5-1-like [Glycine max]
Length = 312
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI +L+ + YL++ YFDRF+ + ++ + L + CL +A
Sbjct: 71 RMEAINWVLKTRATLGFRFETAYLSVTYFDRFLFRRSID---SEKSWAIRLLSIACLSLA 127
Query: 96 WKLRD------QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
K+ + F D+ + + MEL +L+ LEW+ + +F+ +F
Sbjct: 128 AKMEECIVPGLSEFKLDDYSFEGKVIQK-------MELLVLSTLEWKMGIITPFDFLSYF 180
Query: 150 LNISSAKGIKR-------RHVNRIIIEAQADLSFASCKPSVIAAAA 188
+ K K ++I +++ KPSVIAAAA
Sbjct: 181 IR----KICKESPPSPIFSKTMQLIFTTMKEVNLMDHKPSVIAAAA 222
>gi|224006808|ref|XP_002292364.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972006|gb|EED90339.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 337
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLV-LAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
+++YFDRF+S ++ L LAA CL A K+ + S ++ +
Sbjct: 98 SMSYFDRFLSTDNAVAKEALIDRKLYQLAAMTCLYTAVKINEPSIMDPALLSSISGGVYS 157
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI-----SSAKGIKRRHVN--RIIIE-A 170
+ + ME+QIL L WR A +F L + S + + + V+ R IE A
Sbjct: 158 EEDFVGMEVQILKALGWRVNGPTAHDFTSHLLALLPHVSSCSDRVTKDLVDFSRYQIEVA 217
Query: 171 QADLSFASCKPSVIAAAALVH 191
+D KPS++A AA+++
Sbjct: 218 VSDYDLCLQKPSIVALAAILN 238
>gi|349804739|gb|AEQ17842.1| putative g1 s-specific cyclin-d2 [Hymenochirus curtipes]
Length = 231
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMA---GNNLP 115
LA+NY DRF++ V+ + L L C+ + KL++ ++ + N++P
Sbjct: 22 LAMNYLDRFLA------VIPTRKCHLQLLGAVCMFLP-KLKETIPLTAEKLCIYTDNSIP 74
Query: 116 RNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQ 171
+ L EL +L L+W AV +F+ L K R+H I
Sbjct: 75 QEL----LEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKEKLLLIRKHAQTFIALCA 130
Query: 172 ADLSFASCKPSVIAAAAL-VHVCKLLLRD-ENGERPDAKRCRESLIDSTYVD 221
D +FA PS+IA ++ +C L L D EN D+ + I ST VD
Sbjct: 131 TDFNFAMYPPSMIATGSVGAAICGLQLDDGENSLSGDSLTEHLAKITSTDVD 182
>gi|194700248|gb|ACF84208.1| unknown [Zea mays]
gi|194708648|gb|ACF88408.1| unknown [Zea mays]
gi|413956650|gb|AFW89299.1| cyclin delta-3 [Zea mays]
Length = 353
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED--DLVLAANCCLI 93
R ++ I++ + + Y+A+NY DRF+++ + N E L L C+
Sbjct: 88 RSGCVRWIIKTTAMFRFGGKTAYVAVNYLDRFLAQRRV-----NREHAWGLQLLMVACMS 142
Query: 94 IAWKLRDQSFSFSDFMAGNNLPRNYSKHA------LNMELQILNGLEWRSRAVVAVNFVP 147
+A KL +Q + LP + + A L MEL +L LEWR AV ++
Sbjct: 143 LATKLEEQHAPRL-----SELPLDACEFAFDRASVLRMELLVLGTLEWRMVAVTPFPYIS 197
Query: 148 FF---LNISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
F + + R V + +A +S +PS IA A+++
Sbjct: 198 CFAARFGQDERRAVLVRAVECVFAAIRA-MSSVEYQPSTIAVASIL 242
>gi|224010415|ref|XP_002294165.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970182|gb|EED88520.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 273
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 59 LALNYFDRFISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
+A++ DRFIS + +L + + LV+ ++ L IA KL ++ SDF A +L
Sbjct: 23 IAMDIVDRFISNQSAYVAQRTLLCSWQYQLVVVSS--LFIAVKLNERVIVESDFFA--SL 78
Query: 115 PRN-YSKHAL-NMELQILNGLEWRSRAVVAVNFVPFFLNISSAK--GIKRRHVNRIIIEA 170
R Y + ME+ IL GL WR A +V + + L++ S+ + R I+ EA
Sbjct: 79 CRGLYGIDEIEKMEMLILQGLTWRVNAPTSVQMMHYILSLVSSHVDQLDERVWTFILDEA 138
Query: 171 QADLS-------FASCKPSVIAAAALVHVCKLLLRDE 200
+ F++ + S IA A++V+ ++L +D+
Sbjct: 139 RYQTEHAVRHYYFSTQRSSTIAVASIVNAIEMLKKDD 175
>gi|56605898|ref|NP_001008453.1| G1/S-specific cyclin-D3 [Gallus gallus]
gi|53130850|emb|CAG31754.1| hypothetical protein RCJMB04_10g19 [Gallus gallus]
Length = 292
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DR++S + + + L L C+++A KLR+ + +
Sbjct: 80 LAMNYVDRYLSSVPVRK------NHLQLLGAVCMLLASKLRETMPLTVEKLCIYTDNSIT 133
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
+ L+ E+ +L L+W +V+A +F+ L+ + ++H I D
Sbjct: 134 PQQLLDWEILVLEKLKWDLVSVIANDFLAHILHHLPLPKDKMELVKKHAQTFIALCATDY 193
Query: 175 SFASCKPSVIAAAAL 189
+FA PS+IA ++
Sbjct: 194 TFAMYPPSMIATGSI 208
>gi|359359230|gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
Length = 327
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 2 DFHNVAPDFVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLAL 61
D N P + + + +S+ A+ R +++ IL+ YL++
Sbjct: 48 DERNFVPGYDYFSRFQSQSLDASA----------REQSVAWILKVQACYGFQPLTAYLSV 97
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSK 120
NY DRF+ L + G L L + CL +A K+ + S D +
Sbjct: 98 NYLDRFLYSRRLQQTDGW---PLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPR 154
Query: 121 HALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSA-KGIKRRHVNRIIIEAQADLSF 176
MEL +L L+WR R++ +F FF L+ + A G II+ + SF
Sbjct: 155 TIRRMELLVLGVLDWRLRSITPFSFTGFFACKLDPAGAYTGFLISRATEIILSNIKEASF 214
Query: 177 ASCKPS 182
+PS
Sbjct: 215 LEYRPS 220
>gi|342887259|gb|EGU86817.1| hypothetical protein FOXB_02664 [Fusarium oxysporum Fo5176]
Length = 303
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+RP I++++ S +LA+N DR+ SK T+ E LA L+I
Sbjct: 66 MRPELIQLLIDAHASFNLLPRTLFLAVNILDRYCSKQTV------YEQYYKLAGLSALLI 119
Query: 95 AWKLR---DQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+ KL D + D + + S + ME IL L+W R +FV
Sbjct: 120 SSKLVDPPDHTPHMQDLLKFCQCDYDCSM-LIKMERHILKILDWSMRRATVYDFVQLMTA 178
Query: 152 ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL 189
+ + + + + + + +F KPS++A + L
Sbjct: 179 MEGHDEVVQHMATYLGVLSLSYRTFVETKPSIMARSCL 216
>gi|195402834|ref|XP_002060005.1| GJ14657 [Drosophila virilis]
gi|194150319|gb|EDW66005.1| GJ14657 [Drosophila virilis]
Length = 392
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-----QSFSFSDFMA 110
+ LA+NY DRF+S ++ + L + A CL++A K+R+ S F
Sbjct: 210 VVLLAINYMDRFLSTKSVRKT------HLQILAAACLLVASKIREPTCRALSAELLVFYT 263
Query: 111 GNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL--------NISSAKGIKRRH 162
N++ Y + EL +L+ L W +V ++F+ ++ ++S K RH
Sbjct: 264 DNSV---YKDDLIKWELYVLSRLGWDISSVTPLDFLELWIIRLPMKCKDLSDLNTEKVRH 320
Query: 163 VNR-IIIEAQADLSFASCKPSVIAAAALV 190
+ + I A + +F+ S IAA+++V
Sbjct: 321 LAQAFICLAAKEYTFSKYTASTIAASSIV 349
>gi|224056182|ref|XP_002298743.1| predicted protein [Populus trichocarpa]
gi|222846001|gb|EEE83548.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 9 DFVKYFDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
+ + F E++ + + + FL R A++ +L+ +A LA NY D
Sbjct: 70 ELLSLFSKEQEQQASVSVNNVADDPFLSRARQEAVEWMLKVIAHYGFSALTSILAFNYLD 129
Query: 66 RFIS-----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYS 119
RF+S + + P ++ L A CL +A K+ + F D + +
Sbjct: 130 RFLSGPCYQRDSRPWMIQ-------LVAVTCLSLAAKVEETHVPFLLDLQVEDTKYVFEA 182
Query: 120 KHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQA 172
K MEL +L+ L+W+ V ++F+ +I G+K R +++ +
Sbjct: 183 KTIQRMELLVLSTLKWKMHPVTPLSFLD---HIIRRLGLKTHVHWEFLRRCEHLLLSVVS 239
Query: 173 DLSFASCKPSVIAAAALVHV 192
D S PSV+A A ++HV
Sbjct: 240 DSRSVSYLPSVLATATMMHV 259
>gi|428182139|gb|EKX51001.1| hypothetical protein GUITHDRAFT_85274 [Guillardia theta CCMP2712]
Length = 331
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPR 116
+L+ NY DRF+S V+ + L L C++IA K + + DF+ +
Sbjct: 160 FLSTNYVDRFLS------VMPVLRSKLQLVGVTCMLIASKYEEINAPQVEDFVYITD--S 211
Query: 117 NYS-KHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQA-DL 174
YS + L ME+ IL+ L++ AV NF+ ++ + + +H+ + E +
Sbjct: 212 TYSAQEVLQMEVVILHALKFNLTAVTPHNFLTRLCSLLNHDQ-QTKHLCEYLTEITIQEF 270
Query: 175 SFASCKPSVIAAAAL 189
+ +PSVIAA+A+
Sbjct: 271 QYLKYRPSVIAASAV 285
>gi|397594356|gb|EJK56213.1| hypothetical protein THAOC_23946 [Thalassiosira oceanica]
Length = 593
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 10 FVKYFDVEEKSMPAAGYAYINEANFLRPRAIKVILQNSKSNKRNAYIP---YLALNYFDR 66
F FDVE + + A YI E + K+++ + + +P +L + DR
Sbjct: 273 FQNLFDVESRHL-AEIQPYIREQADITSNMRKILVDWIMVHMKFKLVPDTLFLCVQLIDR 331
Query: 67 FISKHTLP----EVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKH- 121
F+ + + +++G L+LAA I ++RD + +D R Y +
Sbjct: 332 FLGREQVNRRNLQLVGITA--LLLAAKHEEIYPPQVRDLVY-ITD--------RAYDRQQ 380
Query: 122 ALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIE-AQADLSFASCK 180
L+ E +L LEWR A F+ FL+I+ A + RH ++ +E + + +
Sbjct: 381 VLDTEQTMLVALEWRISLPTANPFLHRFLSITGACKVT-RHCSQYYLERSLLEHDMLVYR 439
Query: 181 PSVIAAAALV---HVCKLLLRDENGERPDAKRCRES---LIDSTYVDEDSLDSFCTML 232
PSV+AA+++V + L D G R K R L++ T DE+ L +++
Sbjct: 440 PSVVAASSVVLAINNTSLFEGDMEGRRNRKKSTRRKGFILMEYTRFDENELIDCASLI 497
>gi|289540884|gb|ADD09561.1| cyclin d [Trifolium repens]
Length = 316
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 24 AGYAYINEANFL--------RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPE 75
+ + + NFL R AI IL+ +++ + YL++ Y D+F+SK +
Sbjct: 42 TAFGFKKDENFLFEDSVKRARLNAIYWILKKTEALDFHFETAYLSVTYLDQFLSKRFID- 100
Query: 76 VLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLE 134
G + + L + CL +A K+ + + S F +N + K MEL +L+ L+
Sbjct: 101 --GEKDWAIRLLSIACLSLAAKMEEYNVPGLSKFQLDDNYFFD-GKVVQKMELFVLSTLD 157
Query: 135 WRSRAVVAVNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
W + +F+ +F+ N SS+ I + I +++ KPSV
Sbjct: 158 WNMGIITPFSFLSYFIKMFCNESSSNPIVSNTMQPIFTVIMEEINLMDHKPSV 210
>gi|432943260|ref|XP_004083130.1| PREDICTED: G1/S-specific cyclin-D2-like [Oryzias latipes]
Length = 294
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 48 KSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD------- 100
+ K N + LA+NY DRF++ V+ ++ L L C+ +A KL+D
Sbjct: 68 EGEKTNEDVFPLAINYLDRFLA------VVPTRKNFLQLLGAVCMFLASKLKDCRPISAE 121
Query: 101 QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSAK- 156
++DF + PR L EL +L L+W +V+ +F+ L I K
Sbjct: 122 TLCMYTDF---SITPREL----LEWELVVLGKLKWNMASVIPNDFIEHIMRRLPIPKDKL 174
Query: 157 GIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL-VHVCKL 195
+ R+H I D A PS+IA ++ +C L
Sbjct: 175 ALVRKHTQTFIALCATDDRLAMNPPSMIATGSMAAAICGL 214
>gi|374533606|gb|AEZ53716.1| cyclin D2, partial [Spea bombifrons]
Length = 232
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ + L L C+ +A KL++ ++ +
Sbjct: 20 LAMNYLDRFLA------VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 73
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADL 174
L EL +L L+W AV +F+ L + R+H I D
Sbjct: 74 PHELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPMPQDKLLMVRKHAQTFIALCATDF 133
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
+FA PS+IA ++ +C L L D+ E L T D D L +
Sbjct: 134 NFAMYPPSMIATGSVGAAICGLQL-DDGESSLSGDNLTEHLAKITNTDVDCLKA 186
>gi|224108117|ref|XP_002314728.1| predicted protein [Populus trichocarpa]
gi|159025699|emb|CAN88850.1| D1-type cyclin [Populus trichocarpa]
gi|222863768|gb|EEF00899.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R ++ IL+ + YL++NY DRF LP+ G L +A CL +A
Sbjct: 72 REESVAWILKVQAYHGFQPLTAYLSVNYLDRFFYSRRLPQTDGWPWQLLSVA---CLSLA 128
Query: 96 WKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LN 151
K+ + S D + MEL +L+ L+WR R++ +F FF L+
Sbjct: 129 AKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSITPFSFTGFFACKLD 188
Query: 152 ISSAK-GIKRRHVNRIIIEAQADLSFASCKPS 182
+ A G II+ + SF PS
Sbjct: 189 PTGAYIGFLISRATEIILSNIKEASFLEYWPS 220
>gi|359480628|ref|XP_003632504.1| PREDICTED: cyclin-D5-1-like [Vitis vinifera]
Length = 270
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD------QSFSFSDFMAG 111
YL + YFD F+S+ ++ L +A CL +A K+ + F +
Sbjct: 40 YLCVAYFDLFLSRRSIDNERFWATGLLSVA---CLSLAAKMEELRVPNLSEFPVEGYYFD 96
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNR---III 168
N + R MEL +L LEW+ ++ +F+P F+N + + V+R +++
Sbjct: 97 NKVIRR-------MELMVLETLEWKMLSITPFDFIPCFINKFCGESKSKELVSRTMELLL 149
Query: 169 EAQADLSFASCKPSVI 184
+++ +PSVI
Sbjct: 150 AITREVNLMDHRPSVI 165
>gi|147637225|sp|Q6K1Z6.2|CCF21_ORYSJ RecName: Full=Putative cyclin-F2-1; Short=CycF2;1
gi|125582821|gb|EAZ23752.1| hypothetical protein OsJ_07457 [Oryza sativa Japonica Group]
Length = 390
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF----------SFSDFM 109
A++YFDRF+S LP E L L + A K DQ S+ +F
Sbjct: 219 AVSYFDRFLSARALPSY---TEHQLSLVGATAVYTAAKYEDQGTVFKLDAREIASYGEFA 275
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-----RHVN 164
+ ++ L ME +++ L +R A FV F S K R RH+
Sbjct: 276 S--------AQEVLAMEREMMAALGYRLGGPNAETFVEHFTRYSKGKEELRVQRLARHIA 327
Query: 165 RIIIEAQADLSFASCKPSVIAAAAL 189
+E+ L + PSV+AAA +
Sbjct: 328 DRSLESYGCLGY---LPSVVAAAVI 349
>gi|383858650|ref|XP_003704812.1| PREDICTED: G1/S-specific cyclin-D2-like [Megachile rotundata]
Length = 309
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 14 FDVEEKSMPAAGYAYINEAN---FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
EE+ P++ Y + + +R + +L+ + K + L++NY DRF+S
Sbjct: 32 LKTEERYAPSSSYFECVQRDISPLMRKIVAEWMLEVCEEQKCQDEVFPLSMNYVDRFLS- 90
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNM----- 125
+ + L L CL++A KLR+ S ++ + Y+ +++ M
Sbjct: 91 -----ICPIRKSQLQLLGTACLLLASKLREPSPLTAEVLV------FYTDNSITMDDLWR 139
Query: 126 -ELQILNGLEWRSRAVVAVNFVPFFLNISSAKG-----IKRRHVNRIIIEAQADLSFASC 179
E +++ L+W AV +F+ L+ G + RRH I + + F+
Sbjct: 140 WEQLVVSKLKWELSAVTPGDFLMHILSRLPVPGSWDPVMVRRHAQTFIALSAREYKFSMY 199
Query: 180 KPSVI 184
PS+I
Sbjct: 200 TPSMI 204
>gi|15241683|ref|NP_195831.1| cyclin D7-1 [Arabidopsis thaliana]
gi|75311729|sp|Q9LZM0.1|CCD71_ARATH RecName: Full=Putative cyclin-D7-1; AltName: Full=G1/S-specific
cyclin-D7-1; Short=CycD7;1
gi|7340685|emb|CAB82984.1| putative protein [Arabidopsis thaliana]
gi|332003049|gb|AED90432.1| cyclin D7-1 [Arabidopsis thaliana]
Length = 341
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRH--VNRI---IIEAQADLSFASC 179
MEL IL LEWR AV + F + S G+ H +NRI +++ DL
Sbjct: 165 MELIILKALEWRVNAVTSYTFSQ---TLVSKIGMVGDHMIMNRITNHLLDVICDLKMLQY 221
Query: 180 KPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLID 216
PSV+A AA+ +L+ D K CRES+++
Sbjct: 222 PPSVVATAAI----WILMED--------KVCRESIMN 246
>gi|50548683|ref|XP_501811.1| YALI0C13926p [Yarrowia lipolytica]
gi|49647678|emb|CAG82121.1| YALI0C13926p [Yarrowia lipolytica CLIB122]
Length = 371
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
+RP + I++ + + +LA+N DR+ SK + + L CL I
Sbjct: 71 MRPYLLDFIVETHVTLRLQPQTLFLAINLIDRYCSKRVV------YKKHYQLVGCTCLWI 124
Query: 95 AWKLRDQSFSFSDFMAGNNLPRNYSKHAL--NMELQILNGLEWRSRAVVAVNFVPFFLNI 152
A K D+ ++ + + ME +LN LEW +++ FL
Sbjct: 125 AAKYEDKKSRVPTISDLKHMCCGAYEEDMFCQMEGHVLNTLEWTVGHPTTDSYLDLFLGP 184
Query: 153 SSAKGIKR-RHVNRIIIE-AQADLSFASCKPSVIAAAA 188
S + + RHV+R + E A +F S PS++A+ A
Sbjct: 185 ESQQVTQTIRHVSRYLCEIALYPRTFFSFAPSLVASCA 222
>gi|125540223|gb|EAY86618.1| hypothetical protein OsI_07999 [Oryza sativa Indica Group]
Length = 390
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF----------SFSDFM 109
A++YFDRF+S LP E L L + A K DQ S+ +F
Sbjct: 219 AVSYFDRFLSARALPSY---TEHQLSLVGATAVYTAAKYEDQGTVFKLDAREIASYGEFA 275
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-----RHVN 164
+ ++ L ME +++ L +R A FV F S K R RH+
Sbjct: 276 S--------AQEVLAMEREMMAALGYRLGGPNAETFVEHFTRYSKGKEELRVQRLARHIA 327
Query: 165 RIIIEAQADLSFASCKPSVIAAAAL 189
+E+ L + PSV+AAA +
Sbjct: 328 DRSLESYGCLGY---LPSVVAAAVI 349
>gi|307135950|gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]
Length = 347
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
L++NYFDRF+S + LP G L +A CL +A K+ + + Y
Sbjct: 98 LSVNYFDRFLSSNILPRRNGWAFQLLSVA---CLSLAAKMEEPEVPL--LLDLQIFEPKY 152
Query: 119 ---SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
K MEL +++ L WR RAV +F+ F++
Sbjct: 153 VFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 188
>gi|391342982|ref|XP_003745794.1| PREDICTED: G1/S-specific cyclin-D3-like [Metaseiulus occidentalis]
Length = 323
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLR-------DQSFSFSDFMAG 111
LALN DRF+S ++ + L L L++A K+R D+ FSD+
Sbjct: 84 LALNLVDRFLS------IVDVKKSQLQLIGCVTLLVASKMRQSRPLTVDRLVYFSDYSIS 137
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVP-FFLNISSAKGI--KRRHVNRIII 168
+ R + E+ +LN LEW + V+A++++ F + S I RR I+
Sbjct: 138 ASEIRAW-------EMVVLNVLEWNAENVLAIDYLASIFDEVVSPPSIPEVRRKACGILG 190
Query: 169 EAQADLSFASCKPSVIAAAAL------VHVCKLLL 197
+ +F KPS++AAA + H C+ L+
Sbjct: 191 LLSIENAFMYHKPSLLAAACVGAAIKGFHWCRTLV 225
>gi|224103651|ref|XP_002313139.1| predicted protein [Populus trichocarpa]
gi|159025717|emb|CAN88859.1| D3-type cyclin [Populus trichocarpa]
gi|222849547|gb|EEE87094.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 9 DFVKYFDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFD 65
+ + F E++ + + FL R A++ +L+ + +A LA+NY D
Sbjct: 74 ELLSLFSKEQEQQASVSVNNVASDPFLSRARQEAVEWMLKVIAHHGFSALTSILAINYLD 133
Query: 66 RFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALN 124
RF+ N + L A CL +A K+ + D + +K
Sbjct: 134 RFLVSPCYQR--DNRSWMIQLVAVTCLSLAAKVEETHVPLLLDLQVEDTKYLFEAKTIQR 191
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFA 177
MEL +L+ L+W+ V ++F+ +I G+K R +++ +D
Sbjct: 192 MELLVLSTLKWKMHPVTPLSFLD---HIIRRLGLKTNVHWEFLRRCEHLLLYVVSDSRSG 248
Query: 178 SCKPSVIAAAALVHV 192
PSV+A A ++HV
Sbjct: 249 CYLPSVLATATMMHV 263
>gi|374533608|gb|AEZ53717.1| cyclin D2, partial [Spea multiplicata]
Length = 168
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ V+ + L L C+ +A KL++ ++ +
Sbjct: 21 LAMNYLDRFLA------VIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 74
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADL 174
L EL +L L+W AV +F+ L K R+H I D
Sbjct: 75 PHELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPMPQDKLLMVRKHAQTFIALCATDF 134
Query: 175 SFASCKPSVIAAAAL-VHVCKLLLRD 199
+FA PS+IA ++ +C L L D
Sbjct: 135 NFAMYPPSMIATGSVGAAICGLQLDD 160
>gi|225458826|ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera]
gi|302142205|emb|CBI19408.3| unnamed protein product [Vitis vinifera]
Length = 317
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 25 GYAYINEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDL 84
+ +N R A+ IL+ YL + Y DRF+S+ + + +
Sbjct: 56 SFLILNWVKLARLDAVAWILRTRAVFGFRFQTAYLCVAYLDRFLSRRAID---SDKTWAI 112
Query: 85 VLAANCCLIIAWKLRD-QSFSFSDFMAGNNLPRNY-SKHALNMELQILNGLEWRSRAVVA 142
L + CL +A K+ + ++ + S+F N+ SK MEL +LN LEWR ++
Sbjct: 113 RLLSVACLSLAAKMEECRAPALSEFAVEE---YNFESKVIQRMELLVLNTLEWRMGSITP 169
Query: 143 VNFVPFFL----NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVI 184
F+ +F+ N S + R V ++ + +++ +PSVI
Sbjct: 170 FAFIHYFITKFCNQSPPPNVVSRTV-QLTMAIMREINLMDHRPSVI 214
>gi|6448482|emb|CAB61222.1| cyclin D3a [Antirrhinum majus]
Length = 343
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 53 NAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRD-QSFSFSDFMAG 111
+A LA+NY DRF+ + + LAA CL +A K+ + Q D
Sbjct: 104 SALTAVLAVNYLDRFLCTFQFQQDKPWMYQ---LAAVACLSLAAKVEETQVPLLLDLQVE 160
Query: 112 NNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG-IKRRHVNR---II 167
+ SK MEL +L+ L+W+ V ++F+ + + K + + +NR ++
Sbjct: 161 ESKYVFESKTIQRMELLVLSTLKWKMNPVTPISFLEYIARRLALKSHLCKEFLNRCECLL 220
Query: 168 IEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDS 227
+ D F PS +A A +++V L E ++ LI+ +++D ++
Sbjct: 221 LSLITDCRFMCHLPSALATATMLYVISSL------EPCIGVEYQDQLINILGINKDKVEE 274
Query: 228 FCTMLDHM 235
C ++ +
Sbjct: 275 CCKLIQEV 282
>gi|95102028|dbj|BAE94258.1| ZH17 [Rattus norvegicus]
Length = 156
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCK 180
MEL ++N L+W A+ +F+ FL+ K I R+H + + AD+ F S
Sbjct: 1 MELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALSAADVKFISNP 60
Query: 181 PSVIAAAALV 190
PS++AA ++V
Sbjct: 61 PSMVAAGSVV 70
>gi|357627566|gb|EHJ77219.1| cyclin D [Danaus plexippus]
Length = 306
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 38/192 (19%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN- 117
LA++Y DRF+S + + L L CL++A KLR+ S LP
Sbjct: 92 LAISYLDRFLS------ICMVGKSQLQLLGTACLLLASKLREPS--------SRGLPAEL 137
Query: 118 ---YSKHALNM------ELQILNGLEWRSRAVVAVNFVPFFLNISSAKG-----IKRRHV 163
Y+ +++ + EL +L+ L+W V A +F+P L+ +G + RRH
Sbjct: 138 LVFYTANSITLSDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRLPLRGQADAEMVRRHA 197
Query: 164 NRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDED 223
I A D F S +A+ + + L +D +R L + T +D D
Sbjct: 198 QTFISLAARDYEFTLYSASTLASCCIAAALRGLEQDGQLQR---------LHELTGIDLD 248
Query: 224 SLDSFCTMLDHM 235
L + ++ M
Sbjct: 249 CLQTCLEQIEDM 260
>gi|397632580|gb|EJK70619.1| hypothetical protein THAOC_08004 [Thalassiosira oceanica]
Length = 362
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 60 ALNYFDRFIS---------------KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS 104
A++Y DRF++ + E L + + + LA+ CCL +A K+ +
Sbjct: 88 AMSYLDRFLAAGHASQSSPSARTYHQRRAAEALHD-KREYQLASMCCLYVAVKMFEPLSM 146
Query: 105 FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFL----------NISS 154
+ ++ + + L+ME IL+ LEW+ A +F L +I +
Sbjct: 147 DASLLSEISHGCYSTAEILSMETSILHVLEWKLNGPTAQDFATHLLAMLKPSAYRYSIDT 206
Query: 155 AKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRD 199
K I +++I I A AD A PS +A A+L++ + + +D
Sbjct: 207 VKSILDSMLHQIEIAA-ADYDVALVSPSAVAVASLLNALEGMSQD 250
>gi|219125102|ref|XP_002182827.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405621|gb|EEC45563.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 394
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAG-NNL 114
I +AL+YFDR+++ T + +E++L + A CL +A K + ++ +A +
Sbjct: 89 IVIIALSYFDRYMALTTKEDQYTPMENELQVLALTCLFVAIKTFCDATDETECLASIAAI 148
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNI 152
R + EL ILN LEWR F+ F+ +
Sbjct: 149 GRFQMEEIEKAELSILNMLEWRINVPSTFRFIETFVRL 186
>gi|356495506|ref|XP_003516618.1| PREDICTED: cyclin-D5-1-like [Glycine max]
Length = 321
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI IL YL++ YFDRF+SK ++ E L +A+ L +A
Sbjct: 86 RVDAIDWILNTQAKFGFKVETAYLSVTYFDRFLSKRSIDESKPWAIKLLSVAS---LSLA 142
Query: 96 WKLRDQS------FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
K+ +Q+ + D+ N + + NMEL IL+ L+W+ + +++ +F
Sbjct: 143 AKMEEQNVPVLSEYPMDDYRFENKVIK-------NMELMILSTLDWKMGSATPFSYLHYF 195
Query: 150 LN 151
+
Sbjct: 196 VG 197
>gi|356502392|ref|XP_003520003.1| PREDICTED: cyclin-SDS-like [Glycine max]
Length = 624
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R + + I++ S + +L +N DRF+SK + +L++ CL +A
Sbjct: 432 RAQMVHWIIEQSCRRQLRQETLFLGVNLLDRFLSKGYFK-----AKRNLLIVGIACLTLA 486
Query: 96 WKLRDQS----FSFSDFMAGNNLPRNYSK-HALNMELQILNGLEWRSRAVVAVNFVPFFL 150
++ + +F G+N+ YS+ + ME + L+++ NF+ ++L
Sbjct: 487 TRIEENQQYNRVGQKNFYIGSNV---YSRSEVVAMEWVVQEVLKFQCFLPTIYNFLWYYL 543
Query: 151 NISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHVC 193
++A + + V + + A + PS +AAA ++ C
Sbjct: 544 KAANADAVVEKRVKYLAVLALSGHEQLCYWPSTVAAALVILAC 586
>gi|156350442|ref|XP_001622285.1| predicted protein [Nematostella vectensis]
gi|156208783|gb|EDO30185.1| predicted protein [Nematostella vectensis]
Length = 287
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 17 EEKSMPAAGYAYINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTL 73
EE+ +P+ Y I + +R +L+ + + + L++NY DR +S
Sbjct: 34 EERYLPSCNYFKIVQTEVEPHMRKLVATWMLEVCEEERCEEEVFALSMNYLDRILS---- 89
Query: 74 PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGL 133
+L + L L C+ IA K+++ S ++ + ++ L+ EL +L L
Sbjct: 90 --LLPVKKFQLQLLGAVCMFIASKMKETSPLTAEKLCIYTDNSITTEELLDWELLVLGKL 147
Query: 134 EWRSRAVVAVNFV-PFFLNI---SSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAAL 189
+W AV +F+ F + S + R+H + I D F PS++AAA++
Sbjct: 148 KWDVSAVTPHDFLDQIFSRLPLDRSTLDVLRKHASTFIALCCTDDKFLLYTPSMLAAASV 207
>gi|149061846|gb|EDM12269.1| cyclin D1, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S L + L L C+ +A K+++ ++ +
Sbjct: 80 LAMNYLDRFLSLEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIR 133
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
+ L MEL ++N L+W A+ +F+ FL+ K I R+H + D+
Sbjct: 134 PEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCATDV 193
Query: 175 SFASCKPSVIAAAALV 190
F S PS++AA ++V
Sbjct: 194 KFISNPPSMVAAGSVV 209
>gi|326920290|ref|XP_003206407.1| PREDICTED: g1/S-specific cyclin-D1-like [Meleagris gallopavo]
Length = 153
Score = 40.0 bits (92), Expect = 2.4, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCK 180
MEL ++N L+W A+ +F+ FL K I R+H + D+ F S
Sbjct: 1 MELLLVNKLKWNLAAMTPHDFIEHFLTKMPLAEDTKQIIRKHAQTFVALCATDVKFISNP 60
Query: 181 PSVIAAAALV 190
PS+IAA ++V
Sbjct: 61 PSMIAAGSVV 70
>gi|383792047|dbj|BAM10426.1| cyclin, partial [Salix japonica]
Length = 192
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 14 FDVEEKSMPAAGYAYINEANFL---RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFIS- 69
F EE+ + G + + FL R A++ +L+ + LA+NY DRF++
Sbjct: 2 FSKEEEQQASVGVSNVESDPFLSRARQEAVEWMLRVIAHYGFSVLTSILAINYLDRFLAS 61
Query: 70 ----KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALN 124
+ + P ++ L A CL +A K+ + D + +K
Sbjct: 62 PCFQRDSKPWMIQ-------LVAVTCLSLAAKVEETHVHLLLDLQVEDTKYLFEAKTIQR 114
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKR-------RHVNRIIIEAQADLSFA 177
MEL +L+ L+W+ V ++F+ +I G+K R +++ +D
Sbjct: 115 MELLVLSTLKWKMHPVTPLSFLD---HIIRRLGLKNNVHWEFLRRCEHLLLSVVSDSRSV 171
Query: 178 SCKPSVIAAAALVHV 192
PSV+A A ++HV
Sbjct: 172 RYLPSVLATATMMHV 186
>gi|356494832|ref|XP_003516287.1| PREDICTED: putative cyclin-D7-1-like [Glycine max]
Length = 289
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 17 EEKSMPAAGYA-YINEANFLRPRAIKVILQNSKSNKR---NAYIPYLALNYFDRFISKHT 72
E +P Y Y++ N + PR +VI K +R + +LA NY DRF+S
Sbjct: 47 EVLCLPEPDYTKYLHSNNLIFPRC-RVIQWFIKCRRRFNLSFGTVFLAFNYLDRFVS--- 102
Query: 73 LPEVLGNVED----DLVLAANCCLIIAWKLRDQS-FSFSDFMAGNNLPRNYSKHALNMEL 127
+ D L L + CL IA K + S S + S L MEL
Sbjct: 103 ----ICQCNDWEYWMLELLSIACLSIAIKFNEISGLSLHEIQVEGLDYSFQSNVILKMEL 158
Query: 128 QILNGLEWRSRAVVAVNFVP-----FFLNISSAKGIKRRHVNRIIIEAQADLSFASCKPS 182
+L L WR ++ + +F F K I R V ++++A D +PS
Sbjct: 159 ILLKALGWRLNSMTSFSFAEMLGFDFLEPHHHVKLISR--VTDLLVQATLDQKMMEFRPS 216
Query: 183 VIAAAAL 189
V+ +AL
Sbjct: 217 VVGMSAL 223
>gi|148356229|ref|NP_741989.3| G1/S-specific cyclin-D1 [Rattus norvegicus]
gi|729113|sp|P39948.1|CCND1_RAT RecName: Full=G1/S-specific cyclin-D1
gi|473123|emb|CAA53020.1| CYCLIN D1 [Rattus norvegicus]
gi|149061845|gb|EDM12268.1| cyclin D1, isoform CRA_b [Rattus norvegicus]
gi|149061847|gb|EDM12270.1| cyclin D1, isoform CRA_b [Rattus norvegicus]
Length = 295
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S L + L L C+ +A K+++ ++ +
Sbjct: 80 LAMNYLDRFLSLEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIR 133
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
+ L MEL ++N L+W A+ +F+ FL+ K I R+H + D+
Sbjct: 134 PEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCATDV 193
Query: 175 SFASCKPSVIAAAALV 190
F S PS++AA ++V
Sbjct: 194 KFISNPPSMVAAGSVV 209
>gi|400602976|gb|EJP70574.1| cyclin domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 392
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 18/194 (9%)
Query: 15 DVEEKSMPAAGYAYINEAN--FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT 72
D+E+ ++P A + F+RP I I++ + +L +N DR+ SK
Sbjct: 61 DMEDATLPDANLIDMQREVQWFMRPYLIDFIIEAHAAFTLLPETLFLTVNLLDRYCSKRV 120
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHAL--NMELQIL 130
+ + L L+IA K D+ NN+ + ME+ +L
Sbjct: 121 V------YKHHYQLVGCAALLIAAKYGDKKDRVPQITELNNMCCGLYDSGMFTQMEMHVL 174
Query: 131 NGLEWRSRAVVAVNFVPFFLNISSAK---GIKRRHVNRIIIE-AQADLSFASCKPSVIAA 186
N LEW + V FF + +A+ + H+ + E A F S KPS++A
Sbjct: 175 NTLEW----AIGHPTVDFFTQLMAAEESDDAEVEHMAAYLCEIALYHRDFVSTKPSMMAR 230
Query: 187 AALVHVCKLLLRDE 200
A+L +L R E
Sbjct: 231 ASLALARAILGRPE 244
>gi|346227174|ref|NP_001230977.1| G1/S-specific cyclin-D1 [Cricetulus griseus]
gi|145558686|gb|ABP73256.1| cyclin D1 [Cricetulus griseus]
gi|344255801|gb|EGW11905.1| G1/S-specific cyclin-D1 [Cricetulus griseus]
Length = 295
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF+S L + L L C+ +A K+++ ++ +
Sbjct: 80 LAMNYLDRFLSLEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIR 133
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADL 174
+ L MEL ++N L+W A+ +F+ FL+ K I R+H + D+
Sbjct: 134 PEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCATDV 193
Query: 175 SFASCKPSVIAAAALV 190
F S PS++AA ++V
Sbjct: 194 KFISNPPSMVAAGSVV 209
>gi|118485989|gb|ABK94839.1| unknown [Populus trichocarpa]
Length = 186
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRR-------HVNRIIIEAQADLSFA 177
MEL +L+ L+WR V +++F F +I G+K + R+++ +D F
Sbjct: 1 MELLVLSTLQWRMNPVTSISF---FDHIIRRLGLKTQLHWEFLWRCERLLLSVISDSRFM 57
Query: 178 SCKPSVIAAAALVHVCK 194
S PS++A ++HV K
Sbjct: 58 SYLPSILATVTMLHVIK 74
>gi|297806141|ref|XP_002870954.1| CYCD7_1 [Arabidopsis lyrata subsp. lyrata]
gi|297316791|gb|EFH47213.1| CYCD7_1 [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 122 ALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRI---IIEAQADLSFAS 178
L MEL IL LEWR +V + +F ++ G +NRI ++ DL
Sbjct: 162 VLQMELIILKALEWRVNSVTSYSFSQTLVSRIGVVG-DYMMMNRITNHLMNDLCDLKILQ 220
Query: 179 CKPSVIAAAALVHV 192
PSV+AAAA+++V
Sbjct: 221 YPPSVVAAAAMLNV 234
>gi|186461217|gb|ACC78286.1| putative cyclin D1b [Mus musculus]
Length = 310
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + + P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKTEETCAPSVSYFKCVQKEIV-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
L + L L C+ +A K+++ ++ + + L MEL +
Sbjct: 91 LEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIA 185
+N L+W A+ +F+ FL+ K R+H + D+ F S PS++A
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEADENKQTIRKHAQTFVALCATDVKFISNPPSMVA 204
Query: 186 AAALV 190
A ++V
Sbjct: 205 AGSVV 209
>gi|784946|emb|CAA83277.1| cyclin 3b [Arabidopsis thaliana]
Length = 436
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSD---FMAGNNL 114
YL +N DRF+S + L L C++IA K + S + F+ N
Sbjct: 228 YLTVNLIDRFLSNSYIER------QRLQLLGVSCMLIASKYEELSAPGVEEFCFITANTY 281
Query: 115 PRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEA 170
R + L+ME+QILN + +R F+ F+ + A I+ ++ + E
Sbjct: 282 TR---REVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAEL 338
Query: 171 Q-ADLSFASCKPSVIAAAAL 189
+ SF PS+IAA+A+
Sbjct: 339 TLVEYSFLRFLPSLIAASAV 358
>gi|349604749|gb|AEQ00213.1| G1/S-specific cyclin-D2-like protein, partial [Equus caballus]
Length = 285
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA+NY DRF++ P+ L L C+ +A KL++ ++ +
Sbjct: 124 LAMNYLDRFLAGVPTPKT------HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 177
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIK----RRHVNRIIIEAQADL 174
+ L EL +L L+W AV +F+ L K R+H I D
Sbjct: 178 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNDKCLLIRKHAQTFIALCATDF 237
Query: 175 SFASCKPSVIAAAAL-VHVCKL 195
FA PS+IA ++ +C L
Sbjct: 238 KFAMYPPSMIATGSVGAAICGL 259
>gi|397599301|gb|EJK57397.1| hypothetical protein THAOC_22561 [Thalassiosira oceanica]
Length = 279
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 62 NYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKH 121
+ FDRF++ PE + LAA C ++ K+ + D +
Sbjct: 71 SLFDRFMASERCPEECFTSKKIYQLAAITCFYLSAKIIEPITIGVDTLCQICRGTYSEDD 130
Query: 122 ALNMELQILNGLEWRSRAVVAVNFVPFFLNI---SSAKGIKRRHVNRIIIEAQADLSFAS 178
+ME IL LEWR ++FV L + S + I + V + A D+ F++
Sbjct: 131 ITSMERSILEALEWRVSCPQPIDFVRHILRMLPDSGSANILEQSVAEFMTVASKDIYFST 190
Query: 179 CKPSVIAAAAL 189
KPS + L
Sbjct: 191 QKPSAVGLTCL 201
>gi|224067250|ref|XP_002302430.1| predicted protein [Populus trichocarpa]
gi|222844156|gb|EEE81703.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDD----LVLAANC 90
R A++ IL+ + +A LA+NY DRF+ S H +E D LAA
Sbjct: 103 RCEAVEWILKVNVHYSFSAVTAVLAVNYLDRFLLSVH--------LEKDKPWMAQLAAVA 154
Query: 91 CLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
CL +A K+ + Q DF ++ +K ME+ +L+ L+W+ + ++F+ +
Sbjct: 155 CLSLAAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPITPISFLDYI 214
Query: 150 LNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+ K + RI++ PSV+A A ++++
Sbjct: 215 IRRLGLKDYLCLEFLKRCERIVLSVVPGKLSMLYVPSVMATAVMLYI 261
>gi|386381579|ref|ZP_10067302.1| hypothetical protein STSU_02910 [Streptomyces tsukubaensis
NRRL18488]
gi|385670951|gb|EIF93971.1| hypothetical protein STSU_02910 [Streptomyces tsukubaensis
NRRL18488]
Length = 1954
Score = 39.7 bits (91), Expect = 3.1, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 308 PRPPQLAQRSHAAESSSSSPWSHQVAPRSHAGGASSSSPFRPGEQPTEEIAETLEEPEDE 367
P+ P AQ ++ + S+ +Q +PR+ A S +P P E A T ++ +D
Sbjct: 628 PQSPA-AQPTNQSNQSNQGNQPNQTSPRNGANDNGGSGAEKPAMVPMESNAPTPDQGQDT 686
Query: 368 TVLGADSEISGSFSRRPGKQPMEEG---SEADIETPSSFPDRQGIQTMQGEPEADPRT 422
+ + GS ++PG+Q E +E+ + TP S +R G + EP P +
Sbjct: 687 D----QATLVGSIDQQPGEQAKEPDRLVAESTMPTPDSTDERGG---NKDEPAPAPSS 737
>gi|115454129|ref|NP_001050665.1| Os03g0617500 [Oryza sativa Japonica Group]
gi|113549136|dbj|BAF12579.1| Os03g0617500, partial [Oryza sativa Japonica Group]
Length = 306
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +K IL+ YLA+ YFDRF + + + L+ A C+ +A
Sbjct: 48 RRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVA--CVSLA 105
Query: 96 WKLRD-QSFSFSDFMAG-NNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVP 147
K+ + ++ + S+F AG + +S + MEL +L+ L+WR AV +++P
Sbjct: 106 AKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLP 160
>gi|242072101|ref|XP_002451327.1| hypothetical protein SORBIDRAFT_05g027860 [Sorghum bicolor]
gi|241937170|gb|EES10315.1| hypothetical protein SORBIDRAFT_05g027860 [Sorghum bicolor]
Length = 331
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 18/170 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHT-LPEVLGNVEDDLVLAANCCLII 94
R R + I+ + A+NY DRF+S + L VE L + CL I
Sbjct: 123 RSRGVHYIIYAFGRLGLTVTTVFNAVNYLDRFLSINCHLCWEAWMVE----LVSVACLSI 178
Query: 95 AWKLRD------QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF 148
A KL + + M+ + LP +MEL +L L+WR V +F+
Sbjct: 179 ACKLDEVNIPSLHHLQMEEVMSNSFLPATIQ----DMELTLLKALQWRLACVTPYSFLQL 234
Query: 149 FLNISSAKGIKRRHVNRII---IEAQADLSFASCKPSVIAAAALVHVCKL 195
L + + +R I I + + SF PSV+A++AL V L
Sbjct: 235 LLPLLTPHTTTTTTPSRCIRLLIRSLTEPSFIRFDPSVVASSALGCVVAL 284
>gi|449465087|ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
gi|449521665|ref|XP_004167850.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
Length = 330
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFS-FSDFMAGNNLPRN 117
L++NYFDRF+S + LP G L +A CL +A K+ + D
Sbjct: 90 LSVNYFDRFLSSNILPRRNGWAFQLLSVA---CLSLAAKMEEPEVPLLLDLQIFEPKYVF 146
Query: 118 YSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
K MEL +++ L WR RAV +F+ F++
Sbjct: 147 EPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180
>gi|413924450|gb|AFW64382.1| hypothetical protein ZEAMMB73_624124 [Zea mays]
Length = 331
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLNISSAKG----IKRRHVNRIIIEAQADLSFASCK 180
MEL +L+ L+WR AV A +FV +FL+ S G + R + +++ F +
Sbjct: 162 MELLVLSTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSDLVLSTAKGAEFVVFR 221
Query: 181 PSVIAAA 187
PS IAA+
Sbjct: 222 PSEIAAS 228
>gi|89111299|dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
Length = 371
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ +L+ + +A LA+NY DRF+ S H E + LAA CL +
Sbjct: 101 RRAAVEWLLKVNAHYSFSALTAVLAVNYLDRFLFSFHFQREKPWMTQ----LAAVACLSL 156
Query: 95 AWKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + D ++ +K ME+ IL+ L+W+ V ++F+ +I+
Sbjct: 157 AAKVEETEVPLLLDLQVEDSRYVFEAKTIQRMEMLILSTLQWKMNPVTPLSFLD---HIT 213
Query: 154 SAKGIKRR-------HVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+K R I++ +D F PSV++ A ++ V
Sbjct: 214 RRLGLKNRLCCEFLKRCESILLCIISDSRFMLYLPSVLSTATMLLV 259
>gi|159025713|emb|CAN88857.1| D3-type cyclin [Populus trichocarpa]
Length = 341
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDD----LVLAANC 90
R A++ IL+ + +A LA+NY DRF+ S H +E D LAA
Sbjct: 90 RCEAVEWILKVNVHYSFSAVTAVLAVNYLDRFLLSVH--------LEKDKPWMAQLAAVA 141
Query: 91 CLIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
CL +A K+ + Q DF ++ +K ME+ +L+ L+W+ + ++F+ +
Sbjct: 142 CLSLAAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLKWKMNPITPISFLDYI 201
Query: 150 LNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
+ K + RI++ PSV+A A ++++
Sbjct: 202 IRRLGLKDYLCLEFLKRCERIVLSVVPGKLSMLYVPSVMATAVMLYI 248
>gi|350537005|ref|NP_001234787.1| cyclin A3 [Solanum lycopersicum]
gi|5420278|emb|CAB46643.1| cyclin A3 [Solanum lycopersicum]
Length = 378
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 14 FDVEEKSMPAAGYAYINEANF---LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISK 70
+VEE+ P + Y + N +R + +++ ++ K + YLA++Y DRF+S
Sbjct: 122 LEVEERRRPLSNYMEKVQNNVIPSMRTVLVDWLVEVTEEYKLVSDTLYLAVSYIDRFLSS 181
Query: 71 HTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSD---FMAGNNLPRNYSKHALNMEL 127
H L + L L C+++A K + S + ++ N R + +NME
Sbjct: 182 HVL------AMEKLQLLGVSCMLVASKYEEISPPHVEDFCYITDNTYTR---EEVVNMER 232
Query: 128 QILNGLEWRSRAVVAVNFVPFFL 150
+L+ L + + + F+ FL
Sbjct: 233 DLLSFLNFEISSPTTITFLRIFL 255
>gi|290975467|ref|XP_002670464.1| Cyclin_N domain-containing protein [Naegleria gruberi]
gi|284084023|gb|EFC37720.1| Cyclin_N domain-containing protein [Naegleria gruberi]
Length = 519
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 56 IPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFM---AGN 112
I Y A FDR + + + + D+L C I+ K +S + SD + + +
Sbjct: 248 ILYHATMIFDRSLDRFNIEQYYLIDVDNLQALGCACFFISTKYYGRSVNLSDILPPVSSD 307
Query: 113 NLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+ + K L ME +LN L++ R+++ +++V F++
Sbjct: 308 SSIEDLKKQVLRMESWVLNTLDFELRSILLIDYVALFIH 346
>gi|224010121|ref|XP_002294018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970035|gb|EED88373.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 273
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 59 LALNYFDRFISKHTL----PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNL 114
+A++ DRFIS + +L + + LV+ ++ L IA KL + + S+F A +L
Sbjct: 23 IAMDIVDRFISNQSAYVAQRALLCSWQYQLVVVSS--LFIAVKLNELAIVESNFFA--SL 78
Query: 115 PRN-YSKHAL-NMELQILNGLEWRSRAVVAVNFVPFFLNISSAK--GIKRRHVNRIIIEA 170
R Y + ME+ IL GL WR A ++ V + L++ S+ + R I+ EA
Sbjct: 79 CRGLYGIDEIEKMEICILQGLTWRVNAPTSIQMVHYILSLVSSHVDQLDERVWTFILDEA 138
Query: 171 QADLS-------FASCKPSVIAAAALVHVCKLLLRDE 200
+ F++ + S IA A++V+ ++L +D+
Sbjct: 139 RYQTEHAVRHYYFSTQRSSTIAVASIVNAIEMLKKDD 175
>gi|413919731|gb|AFW59663.1| hypothetical protein ZEAMMB73_934516, partial [Zea mays]
Length = 517
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDL---VLAANCCLIIAWKLRDQS-----FSFSDFM 109
YLA+NY +RF+S L E L D +L+ C L ++ + D
Sbjct: 108 YLAVNYLNRFLS---LSECLSYWNKDWMTQLLSVACVLHFRFRWLPKMEEIPVMQSLDLQ 164
Query: 110 AGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
G+ +K MEL +L L WR +A+ +++ +FLN
Sbjct: 165 VGDVCYVFEAKTVHRMELLVLTTLNWRMKAITPFSYMDYFLN 206
>gi|363807692|ref|NP_001241910.1| uncharacterized protein LOC100804102 [Glycine max]
gi|255639037|gb|ACU19819.1| unknown [Glycine max]
Length = 383
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV-----LAANC 90
R A++ IL+ + + LA+NY DRF+ + ++ L+A
Sbjct: 100 REEAVEWILKVNARYSFSTLTAVLAVNYLDRFLFSFRFQNDNNDNNNNNNPWLTQLSAVA 159
Query: 91 CLIIAWKLRDQSFS-FSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
CL + K + F D + +K ME+ +L+ L W+ V ++F+ +
Sbjct: 160 CLSLTAKFEETHVPLFIDLQVEESKYLFEAKTVKRMEILVLSTLGWKMNPVTPLSFLDYI 219
Query: 150 LNISSAKGIK----RRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
KG R +++ AD F PSV+A A ++ V
Sbjct: 220 TRKLGLKGYLCWEFLRRCETVLLSVFADSRFMGYLPSVLATATVMRV 266
>gi|413956651|gb|AFW89300.1| hypothetical protein ZEAMMB73_103775 [Zea mays]
Length = 354
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Query: 40 IKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVED--DLVLAANCCLIIAWK 97
IKV + + AY+ A+NY DRF+++ + N E L L C+ +A K
Sbjct: 96 IKVTTAMFRFGGKTAYV---AVNYLDRFLAQRRV-----NREHAWGLQLLMVACMSLATK 147
Query: 98 LRDQSFSFSDFMAGNNLPRNYSKHA------LNMELQILNGLEWRSRAVVAVNFVPFF-- 149
L +Q + LP + + A L MEL +L LEWR AV ++ F
Sbjct: 148 LEEQHAPRL-----SELPLDACEFAFDRASVLRMELLVLGTLEWRMVAVTPFPYISCFAA 202
Query: 150 -LNISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALV 190
+ + R V + +A +S +PS IA A+++
Sbjct: 203 RFGQDERRAVLVRAVECVFAAIRA-MSSVEYQPSTIAVASIL 243
>gi|147636925|sp|Q0DQA9.2|CCD51_ORYSJ RecName: Full=Cyclin-D5-1; AltName: Full=G1/S-specific cyclin-D5-1;
Short=CycD5;1
gi|50428690|gb|AAT77041.1| putative Cyclin [Oryza sativa Japonica Group]
gi|108709847|gb|ABF97642.1| Cyclin, N-terminal domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 367
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R +K IL+ YLA+ YFDRF + + + L+ A C+ +A
Sbjct: 109 RRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVA--CVSLA 166
Query: 96 WKLRD-QSFSFSDFMAG-NNLPRNYSKHALN-MELQILNGLEWRSRAVVAVNFVP 147
K+ + ++ + S+F AG + +S + MEL +L+ L+WR AV +++P
Sbjct: 167 AKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLP 221
>gi|357161846|ref|XP_003579222.1| PREDICTED: cyclin-D5-2-like [Brachypodium distachyon]
Length = 351
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 34 FLRPR--AIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCC 91
FL R ++K ILQ YLA+ YFDRF + + L+ A C
Sbjct: 91 FLEARLASVKWILQTRGCFGFAHRTAYLAIAYFDRFCLRRRVDRAAMPWAARLLSMA--C 148
Query: 92 LIIAWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
+ +A K+ + ++ + S+ G S MEL +L+ L WR AV +++P F
Sbjct: 149 VSVAAKMEEYRAPALSELDGGYEFC---SGSVRRMELLVLSTLGWRMAAVTPFDYLPCF 204
>gi|54400536|ref|NP_001006017.1| cyclin D3 [Danio rerio]
gi|53733889|gb|AAH83406.1| Zgc:103502 [Danio rerio]
gi|182888626|gb|AAI63994.1| Zgc:103502 protein [Danio rerio]
Length = 277
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 54/245 (22%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKV--ILQNSKSNKRNAYIPYLALNYFDRFISKH 71
+E+ ++ A LR R I +LQ + K + LA++Y DR++S+
Sbjct: 41 LSLEKPNISGKHIAGAESEELLRMRKILTGWMLQVCEEQKCEEEVFPLAVHYLDRYMSQS 100
Query: 72 TL----PEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHA----- 122
+ ++LG+V C+ +A KLR+ ++ ++ Y+ HA
Sbjct: 101 AVRPCHLQLLGSV----------CMFLASKLRETVPLSAETLSI------YTDHACSVPE 144
Query: 123 -LNMELQILNGLEWRSRAVVAVNFVPFFLNI----SSAKGIKRRHVNRIIIEAQADLSFA 177
L E+ +++ L+W +V+ +F+ L + RRH + I +L F+
Sbjct: 145 ILQWEVLLVSHLQWDLASVLPSDFLELILLALPIPAQDHSSVRRHTHCYIALTATELKFS 204
Query: 178 SCKPSVIAAAALVHVCKLLLRDENGERPDAKRCRESLIDSTYVDEDSLDSFCTMLD---- 233
+PSV+A + + A R L+ T E L MLD
Sbjct: 205 FFRPSVVACSCVT----------------AALLRLKLLQDTVSAEQMLQMLSNMLDMDKA 248
Query: 234 --HMC 236
H+C
Sbjct: 249 SLHVC 253
>gi|356536192|ref|XP_003536623.1| PREDICTED: cyclin-D3-1-like isoform 2 [Glycine max]
Length = 392
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFI-SKHTLPEVLGNVEDDLVLAANCCLII 94
R A++ +L+ + +A LA+ Y DRF+ S H E ++ L A C+ +
Sbjct: 122 RREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQ----LVAVTCISL 177
Query: 95 AWKLRD-QSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
A K+ + Q D + +K MEL +L+ L+W+ V ++F+ +I
Sbjct: 178 AAKVEETQVPLLLDLQVQDTKYLFEAKTIQRMELLVLSTLKWKMHPVTPLSFLD---HII 234
Query: 154 SAKGIKRRHVNRIIIEAQADLSFASCKPSVIAAAALVHV 192
G+ R H++ + + F C PSV+A A ++HV
Sbjct: 235 RRLGL-RTHLHWEFLRRYS--RFVGCLPSVLATATMLHV 270
>gi|91081481|ref|XP_974376.1| PREDICTED: similar to cyclin d [Tribolium castaneum]
Length = 285
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 34 FLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLI 93
F+R +L+ + I LA+N DRF+ V L L CL+
Sbjct: 55 FMRKVVATWMLEVCEEQMCEDQILPLAVNLMDRFLC------VCPIRRQQLQLLGATCLL 108
Query: 94 IAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLNIS 153
IA K+R + D + S+ ++ EL +L+ L+W A+ +F+ +
Sbjct: 109 IASKVRSTNILPIDLLCAYTDYSVTSEMLVSWELLVLSKLKWNIAAITGFDFIDQIIERC 168
Query: 154 SAKG---IKRRHVNRII 167
S G + RRH + ++
Sbjct: 169 SWGGESSLLRRHAHTLV 185
>gi|356540631|ref|XP_003538790.1| PREDICTED: cyclin-D5-3-like [Glycine max]
Length = 327
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 36 RPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIA 95
R AI I YL++ YFDRF+S+ ++ E + + L + CL +A
Sbjct: 85 RVDAIDWIFDTQAKFGFKVETAYLSVTYFDRFLSERSIDE---SKPWAIRLLSVACLSLA 141
Query: 96 WKLRDQS------FSFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFF 149
K+ +Q+ + D+ N + + NMEL IL+ L+W+ + ++ +F
Sbjct: 142 AKMEEQNVPPLSEYPIEDYRFENKVIK-------NMELMILSTLDWKMGSATPFAYLHYF 194
Query: 150 LN 151
+
Sbjct: 195 VG 196
>gi|414870226|tpg|DAA48783.1| TPA: hypothetical protein ZEAMMB73_808698 [Zea mays]
Length = 682
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 86 LAANCCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVN 144
L + CL +A K+ + S D G+ +K MEL +L+ L WR RAV +
Sbjct: 274 LLSVACLSLAAKMEETYVPPSLDLQVGDTRYVFEAKTVQRMELLVLSTLRWRMRAVTPFS 333
Query: 145 FVPFFLN-ISSAKGIKRRHVNR---IIIEAQADLSFASCKPSVI 184
++ +FL+ + RR V R +I+ + +PS I
Sbjct: 334 YIDYFLHRLKDGGAPSRRVVLRSAELILRVARGTCYLGFRPSEI 377
>gi|224136021|ref|XP_002327361.1| cytochrome P450 [Populus trichocarpa]
gi|222835731|gb|EEE74166.1| cytochrome P450 [Populus trichocarpa]
Length = 486
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 195 LLLRDENGERPDAKRCRESLIDSTYVDEDSLDSFCTML-----DHMCCRKKMFQEINEEF 249
L+ D+NG+ + K ++ D+ S TM+ H C +K+ +E E
Sbjct: 268 LITSDDNGKTMNHKEIANKIVGLLVASHDTTSSSITMVMYYLAQHPCIYQKVLKEQTEIA 327
Query: 250 LSDVGGFHVLLNLDDAQQLWSLYDFKEWWWVIATRTAKDSEPSQSAER 297
+S G LLN +D Q++ ++ W + + S PSQ A R
Sbjct: 328 MSKAPG--ELLNWNDVQKM-------KYSWCVVCEAMRFSSPSQGAFR 366
>gi|296046565|gb|ADG86424.1| cyclin D1 [Passiflora morifolia]
Length = 331
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSF-SFSDFMAGNNLPR 116
YL+++Y DR + LP+ G L L + CL +A K+ + S D
Sbjct: 97 YLSVDYLDRVLYSRRLPQTDGW---PLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYI 153
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFVPFF---LNISSA-KGIKRRHVNRIIIEAQA 172
+ MEL +L L+WR R++ +F FF L+ + A G II+
Sbjct: 154 FEPRTIRRMELLVLGVLDWRLRSITPFSFTGFFACKLDPAGAYTGFLISRATEIILSNIK 213
Query: 173 DLSFASCKPS 182
+ SF +PS
Sbjct: 214 EASFLEYRPS 223
>gi|169807850|emb|CAJ88858.2| ZH17 protein [Rattus norvegicus]
Length = 156
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 125 MELQILNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCK 180
MEL ++N L+W A+ +F+ FL+ K I R+H + D+ F S
Sbjct: 1 MELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCATDVKFISNP 60
Query: 181 PSVIAAAALV 190
PS++AA ++V
Sbjct: 61 PSMVAAGSVV 70
>gi|432857209|ref|XP_004068583.1| PREDICTED: G1/S-specific cyclin-D1-like [Oryzias latipes]
Length = 300
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 59 LALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNY 118
LA++Y D ++ + + + L L C+ +A K+R+ + +A
Sbjct: 72 LAVHYLDSYLKRFCIEK------SSLQLLGTVCMFVASKMRETVPLTASKLAIYTDNSIS 125
Query: 119 SKHALNMELQILNGLEWRSRAVVAVNFV-------PFF--LNISSAKGIKRRHVNRIIIE 169
+ L E+ +++ L W +VV +F+ PF LNI + RRHV+ I
Sbjct: 126 TADILQWEVMVVSRLGWCLASVVPSDFLEPILQALPFVHPLNIQN----MRRHVHSYIAL 181
Query: 170 AQADLSFASCKPSVIAAAALVHVCKLLLRDENGERPDA 207
A D F++ PS +A A + + L G PD+
Sbjct: 182 AAMDCRFSAFLPSTLACACVTAAVQTL---AAGNSPDS 216
>gi|255636000|gb|ACU18345.1| unknown [Glycine max]
Length = 194
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS-DFMAGNNLPR 116
YL++NY DRF+S + LP+ + + L A CL +A K+ + S D G +
Sbjct: 118 YLSINYLDRFLSAYELPK---HRTWTMQLLAVGCLSLAAKMEETDAPMSLDLQVGESKYI 174
Query: 117 NYSKHALNMELQILNGLEWR 136
+K MEL +L+ L WR
Sbjct: 175 FEAKTIQRMELLVLSTLRWR 194
>gi|449495649|ref|XP_004159904.1| PREDICTED: cyclin-D3-1-like [Cucumis sativus]
Length = 376
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 14/209 (6%)
Query: 30 NEANFLRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAAN 89
N + R I +L+ + ++ LA+NY DR +S P + L L A
Sbjct: 89 NALSLARTEVIDWLLKVNAFYGFSSLTALLAINYLDRILSG---PHFQRDKPWMLQLLAV 145
Query: 90 CCLIIAWKLRDQSFSFS-DFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPF 148
C+ +A K+ + D ++ K MEL +L L+W+ V V+F+
Sbjct: 146 TCISLAAKIEEIRVPLLLDLQVEDSKYIFEPKTIQRMELLVLTALQWKMHPVTPVSFLGI 205
Query: 149 FLN--ISSAKGIKR---RHVNRIIIEAQADLSFASCKPSVIAAAALVHVCKLLLRDENGE 203
+ + I++ R R+++ +D PSV+A +A+V V +E G
Sbjct: 206 ITKEFVMKNQYIQKEFLRRCERVLLSIVSDSRSVGILPSVMAVSAMVSVV-----EEMGN 260
Query: 204 RPDAKRCRESLIDSTYVDEDSLDSFCTML 232
+ ++ L+++ +++ + C ++
Sbjct: 261 CNPLEEFQDHLLNALKINKGRVKECCKVI 289
>gi|291234540|ref|XP_002737200.1| PREDICTED: cyclin A-like [Saccoglossus kowalevskii]
Length = 244
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 58 YLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRN 117
+LA++ DRF+ K + E + L L A CL+IA K ++ + N N
Sbjct: 64 HLAVSLLDRFMDKFDIEE------NQLHLVALTCLMIAAKFEERDIKIPEISRLNKYVDN 117
Query: 118 YSKHA--LNMELQILNGLEWRSRAVVAVNFVPFFL-------NISSAKGIKRRHVNRIII 168
K L MEL +LN W A +++ +++ +I + + ++ +I +
Sbjct: 118 SYKWQDFLQMELLLLNFFSWNVCQPTASHYIEYYIQECISENDIHAGQPLRCPWKAKIYM 177
Query: 169 EAQA---------DLSFASCKPSVIAAAALV--HVCKLL 196
E A D +F PS+I+AA + +C LL
Sbjct: 178 EKYAHYFLEISLQDHAFVFFHPSLISAACIAASRICLLL 216
>gi|126723879|gb|ABO26853.1| cyclin D1 [Felis catus]
Length = 178
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 16/171 (9%)
Query: 17 EEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFISKHT 72
EE P+ Y + L P K++ L+ + K + LA+NY DRF+S
Sbjct: 19 EETCAPSVSYFKCVQKEIL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEP 77
Query: 73 LPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQILNG 132
+ + L L C+ +A K+++ ++ + L MEL ++N
Sbjct: 78 VKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPDELLQMELVLVNK 131
Query: 133 LEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIEAQADLSFASCKPSV 183
L+W A+ +F+ FL+ + N+ II A A C P V
Sbjct: 132 LKWNLAAMTPHDFIEHFLS-----KMPVAEENKQIIRKHAQTFVALCAPDV 177
>gi|74221114|dbj|BAE42061.1| unnamed protein product [Mus musculus]
Length = 295
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 39/197 (19%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + + P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKTEETCAPSVSYFKCVQKEIV-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
L + L L C+ +A K+++ +P K + + I
Sbjct: 91 LEPLKK------SRLQLLGATCMFVASKMKE------------TIPLTAEKLCIYTDNSI 132
Query: 130 ------------LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQAD 173
+N L+W A+ +F+ FL+ K R+H + D
Sbjct: 133 RPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQTIRKHAQTFVALCATD 192
Query: 174 LSFASCKPSVIAAAALV 190
+ F S PS++AA ++V
Sbjct: 193 VKFISNPPSMVAAGSVV 209
>gi|6680868|ref|NP_031657.1| G1/S-specific cyclin-D1 [Mus musculus]
gi|116153|sp|P25322.1|CCND1_MOUSE RecName: Full=G1/S-specific cyclin-D1
gi|27448230|gb|AAO13813.1|AF384675_3 cyclin D1 [Mus musculus]
gi|192878|gb|AAA37502.1| cyclin-like protein [Mus musculus]
gi|994897|gb|AAB34495.1| cyclin D1 [Mus sp.]
gi|26343397|dbj|BAC35355.1| unnamed protein product [Mus musculus]
gi|27924089|gb|AAH44841.1| Ccnd1 protein [Mus musculus]
gi|74208107|dbj|BAE29157.1| unnamed protein product [Mus musculus]
gi|74228054|dbj|BAE37996.1| unnamed protein product [Mus musculus]
gi|148686336|gb|EDL18283.1| cyclin D1, isoform CRA_b [Mus musculus]
Length = 295
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 14 FDVEEKSMPAAGYAYINEANFLRPRAIKVI----LQNSKSNKRNAYIPYLALNYFDRFIS 69
EE P+ Y + + P K++ L+ + K + LA+NY DRF+S
Sbjct: 32 LKTEETCAPSVSYFKCVQKEIV-PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS 90
Query: 70 KHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHALNMELQI 129
L + L L C+ +A K+++ ++ + + L MEL +
Sbjct: 91 LEPLKK------SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
Query: 130 LNGLEWRSRAVVAVNFVPFFLN----ISSAKGIKRRHVNRIIIEAQADLSFASCKPSVIA 185
+N L+W A+ +F+ FL+ K R+H + D+ F S PS++A
Sbjct: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEADENKQTIRKHAQTFVALCATDVKFISNPPSMVA 204
Query: 186 AAALV 190
A ++V
Sbjct: 205 AGSVV 209
>gi|224001014|ref|XP_002290179.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973601|gb|EED91931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1043
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 63 YFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFSDFMAGNNLPRNYSKHA 122
Y D+++S H + E L L A + +A K+ +A + H
Sbjct: 163 YLDQYLSIHYVDEEL------FQLVAMASIYLAIKIHSSRKVAIKSIAAMGRGKIDESHI 216
Query: 123 LNMELQILNGLEWRSRAVVAVNFVPFFLNISSAKGIKRRHVNRIIIE-AQADLSFASCKP 181
+ MEL I+ L+W FV F + S + + +R + E + F + KP
Sbjct: 217 VAMELSIMQTLQWHLHPPTPTAFVDNFFPLLSEESTEALEFSRFLTELSVCAYPFVTAKP 276
Query: 182 SVIAAAALVH 191
S IA AA+++
Sbjct: 277 SSIAIAAMLY 286
>gi|328700925|ref|XP_001944280.2| PREDICTED: cyclin-J-like [Acyrthosiphon pisum]
Length = 295
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLII 94
LRP +K I +K+ + + +LA+ D F+ H L D ++L + CL +
Sbjct: 45 LRPVLLKTIRSIAKTCEISNVCVHLAVTLMDLFMDNHDLK------FDTIMLVSFACLTL 98
Query: 95 AWKLRDQSFSFSDFMAGNNLPRN--YSKHALNMELQILNGLEWRSRAVVAVNFVPFF--- 149
A K+ + + N+ + H +E++IL E+ +F+ F+
Sbjct: 99 AAKIEEHCLNIPKLKTMQNVISKDVTNSHFRKVEMKILMFFEFNVAVPTVAHFIEFYKDH 158
Query: 150 ------LNISSAKGIKRRHVNRIIIEAQADLSFASCK-----PSVIAAAALVHVCKLLLR 198
+ I + N +II Q D+S S K PS++AA+ + L R
Sbjct: 159 FYCDNDFYHNEFACILKDKFNNMIISYQ-DVSLESIKLISYNPSMVAASII-----LTTR 212
Query: 199 DENGERPD-AKRCRESLIDSTYVDEDSLDSFCTMLDHMCCRKKMFQEINEEFLSDVGGF 256
G P + R+ + Y+ +D L C++L + + ++E +LS GF
Sbjct: 213 HTLGLVPCWTAQLRKV---TGYLKKD-LVQCCSLLGRNVMQHRKLVPVDEGYLSSSPGF 267
>gi|410919671|ref|XP_003973307.1| PREDICTED: G1/S-specific cyclin-D2-like [Takifugu rubripes]
Length = 268
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 60 ALNYFDRFISKHTLPEVLGNVEDDLVLAANCCLIIAWKLRDQSFSFS---DFMAGNNLPR 116
A+ Y D ++S+ DL L C+++A K+RD + N++P
Sbjct: 84 AVLYLDCYLSR------FATEMSDLQLLGAVCMLLASKMRDSVHLTAGKLSIYTDNSVPV 137
Query: 117 NYSKHALNMELQILNGLEWRSRAVVAVNFV-------PFFLNISSAKGIKRRHVNRIIIE 169
+ L EL +++ L+W +VV +F+ PFF S RHV+ +
Sbjct: 138 S---EILQWELSVVSQLDWCLPSVVPSDFLEPILHALPFFQ--SQHLPNMCRHVHSYVAL 192
Query: 170 AQADLSFASCKPSVIAAAAL-VHVCKLLLRD 199
A D F++ PS +A A L V + KL L D
Sbjct: 193 AATDCRFSAFLPSTVACACLSVALWKLKLAD 223
>gi|194466666|ref|ZP_03072653.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus reuteri
100-23]
gi|194453702|gb|EDX42599.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus reuteri
100-23]
Length = 1877
Score = 38.1 bits (87), Expect = 9.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 342 SSSSPFRPGEQPTEE-IAETLEEPEDETVLGADSEISGSFSRRPGKQPMEEGSEADIETP 400
+S +P EQPT + A+ E+P + + + + +P +QP + + E P
Sbjct: 1679 TSQPTVQPTEQPTSQPTAQPTEQPTSQPTAQPTEQPTSQPTAQPTEQPTSQPTAQPTEQP 1738
Query: 401 SSFPDRQGIQTMQGEPEADP 420
+S P Q + +P A P
Sbjct: 1739 TSQPTAQPTEQPTSQPTAQP 1758
>gi|334184369|ref|NP_001189576.1| cyclin-D2-1 [Arabidopsis thaliana]
gi|330252220|gb|AEC07314.1| cyclin-D2-1 [Arabidopsis thaliana]
Length = 362
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 35 LRPRAIKVILQNSKSNKRNAYIPYLALNYFDRFISKHTLPEVLGNVEDDLV--LAANCCL 92
+R +A+ IL+ L++NY DRF++ + LP+ + D L A CL
Sbjct: 96 VRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPK-----DKDWAAQLLAVSCL 150
Query: 93 IIAWKLRDQSF-SFSDFMAGNNLPRNYSKHALNMELQILNGLEWRSRAVVAVNFVPFFLN 151
+A K+ + D + +K MEL ++ L WR +A+ +F+ +F++
Sbjct: 151 SLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVD 210
Query: 152 ISSAKGIKRRHV--------NRIIIEAQADLSFASCKPS 182
S HV +R I+ + F +PS
Sbjct: 211 KISG------HVSENLIYRSSRFILNTTKAIEFLDFRPS 243
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,684,937,215
Number of Sequences: 23463169
Number of extensions: 327102282
Number of successful extensions: 1053249
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 1094
Number of HSP's that attempted gapping in prelim test: 1034345
Number of HSP's gapped (non-prelim): 15349
length of query: 480
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 334
effective length of database: 8,933,572,693
effective search space: 2983813279462
effective search space used: 2983813279462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)