Query 037973
Match_columns 525
No_of_seqs 254 out of 2975
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 10:19:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037973.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037973hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3dhwc1 c.37.1.12 (C:1-240) Me 99.9 4.4E-28 3.2E-32 232.9 13.6 112 2-119 116-228 (240)
2 d1g2912 c.37.1.12 (1:1-240) Ma 99.9 4.1E-28 3E-32 233.1 13.1 112 2-119 115-227 (240)
3 d1oxxk2 c.37.1.12 (K:1-242) Gl 99.9 4.5E-28 3.3E-32 232.7 12.2 112 2-119 116-228 (242)
4 d1v43a3 c.37.1.12 (A:7-245) Hy 99.9 5E-28 3.6E-32 232.2 11.7 112 2-119 112-224 (239)
5 d2awna2 c.37.1.12 (A:4-235) Ma 99.9 3.7E-28 2.7E-32 232.3 10.5 112 2-119 106-218 (232)
6 d3d31a2 c.37.1.12 (A:1-229) Su 99.9 7.4E-28 5.4E-32 229.5 12.0 111 3-119 104-215 (229)
7 d2onka1 c.37.1.12 (A:1-240) Mo 99.9 8.6E-28 6.3E-32 230.2 11.1 112 2-119 102-214 (240)
8 d1vpla_ c.37.1.12 (A:) Putativ 99.9 4.2E-27 3E-31 226.8 14.1 128 3-144 110-237 (238)
9 d1l2ta_ c.37.1.12 (A:) MJ0796 99.9 1.3E-26 9.6E-31 221.3 14.3 108 2-116 120-229 (230)
10 d1g6ha_ c.37.1.12 (A:) MJ1267 99.9 1.2E-26 9.1E-31 225.9 13.7 110 4-119 128-237 (254)
11 d1ji0a_ c.37.1.12 (A:) Branche 99.9 6.5E-27 4.7E-31 225.8 10.9 111 3-119 115-226 (240)
12 d1b0ua_ c.37.1.12 (A:) ATP-bin 99.9 1.2E-26 9.1E-31 225.9 12.5 112 2-119 124-236 (258)
13 d1l7vc_ c.37.1.12 (C:) ABC tra 99.9 1.1E-25 8.1E-30 216.2 9.7 111 3-119 102-219 (231)
14 d3b60a1 c.37.1.12 (A:329-581) 99.9 2.3E-24 1.6E-28 209.5 12.6 113 4-120 119-238 (253)
15 d2pmka1 c.37.1.12 (A:467-707) 99.9 1.2E-23 8.7E-28 202.7 13.4 111 5-119 107-224 (241)
16 d1jj7a_ c.37.1.12 (A:) Peptide 99.9 6.4E-24 4.6E-28 206.0 10.9 103 15-120 136-239 (251)
17 d1mv5a_ c.37.1.12 (A:) Multidr 99.9 6.2E-24 4.5E-28 205.0 9.2 112 5-120 107-225 (242)
18 d2hyda1 c.37.1.12 (A:324-578) 99.9 1.9E-23 1.4E-27 202.7 12.4 113 4-120 121-240 (255)
19 d1r0wa_ c.37.1.12 (A:) Cystic 99.9 1.9E-22 1.4E-26 198.6 8.3 102 16-120 144-245 (281)
20 d1sgwa_ c.37.1.12 (A:) Putativ 99.7 2E-18 1.4E-22 161.6 9.9 94 4-107 104-197 (200)
21 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.5 2.1E-14 1.5E-18 139.8 11.1 80 29-110 199-286 (292)
22 g1ii8.1 c.37.1.12 (A:,B:) Rad5 99.2 1.2E-11 8.8E-16 121.9 10.1 77 30-108 277-361 (369)
23 d1w1wa_ c.37.1.12 (A:) Smc hea 98.8 5.1E-09 3.7E-13 106.4 8.9 74 30-105 331-408 (427)
24 d1e69a_ c.37.1.12 (A:) Smc hea 98.1 5.6E-06 4.1E-10 80.0 10.7 76 30-108 218-299 (308)
25 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.0 9.2E-07 6.7E-11 78.4 3.2 79 32-114 82-161 (178)
26 g1xew.1 c.37.1.12 (X:,Y:) Smc 97.1 0.00078 5.6E-08 64.9 10.1 74 30-106 223-300 (329)
27 d1ewqa2 c.37.1.12 (A:542-765) 92.0 0.19 1.4E-05 45.2 8.2 63 34-98 99-162 (224)
28 d1wb9a2 c.37.1.12 (A:567-800) 86.0 0.61 4.4E-05 42.1 6.7 59 34-92 105-165 (234)
29 d1g5ta_ c.37.1.11 (A:) ATP:cor 84.5 0.42 3E-05 40.4 4.4 67 40-107 83-153 (157)
30 d1cr2a_ c.37.1.11 (A:) Gene 4 51.0 22 0.0016 31.1 8.5 43 47-89 145-195 (277)
31 d1d2na_ c.37.1.20 (A:) Hexamer 46.5 21 0.0015 31.3 7.4 62 31-92 79-154 (246)
32 d1m3sa_ c.80.1.3 (A:) Hypothet 44.1 17 0.0012 30.4 6.0 41 68-108 93-133 (186)
33 d1nlfa_ c.37.1.11 (A:) Hexamer 36.4 30 0.0022 30.1 6.7 46 45-90 128-179 (274)
34 d1r7ra3 c.37.1.20 (A:471-735) 32.9 49 0.0036 29.0 7.6 57 36-92 87-157 (265)
35 d1vima_ c.80.1.3 (A:) Hypothet 31.6 30 0.0022 28.8 5.6 41 68-108 96-136 (192)
36 d1ixza_ c.37.1.20 (A:) AAA dom 25.2 77 0.0056 27.4 7.4 48 45-92 97-158 (247)
37 d1lv7a_ c.37.1.20 (A:) AAA dom 25.0 69 0.005 27.9 7.0 51 42-92 97-161 (256)
38 d1lrza2 d.108.1.4 (A:1-165) Me 25.0 44 0.0032 27.3 5.3 61 62-129 81-141 (165)
39 d1u0sy_ c.23.1.1 (Y:) CheY pro 24.2 64 0.0047 24.2 5.9 72 5-92 15-86 (118)
40 d1tf7a2 c.37.1.11 (A:256-497) 23.8 39 0.0028 28.6 5.0 60 48-107 115-187 (242)
41 d1bupa1 c.55.1.1 (A:4-188) Hea 22.3 16 0.0012 30.4 1.8 32 29-60 144-175 (185)
42 d1l8qa2 c.37.1.20 (A:77-289) C 21.3 91 0.0066 26.1 6.9 50 46-95 94-144 (213)
No 1
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=4.4e-28 Score=232.89 Aligned_cols=112 Identities=24% Similarity=0.449 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS- 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~- 80 (525)
+.+++++++|+.+||++.+|+.+++ |||||||||+||+||+.+|++|||||||+|||+.++.++++.|++++++
T Consensus 116 ~~~~~v~~~L~~vgL~~~~~~~~~~-----LSGG~~QRvaiAraL~~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~ 190 (240)
T d3dhwc1 116 EVKRRVTELLSLVGLGDKHDSYPSN-----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRL 190 (240)
T ss_dssp HHHHHHHHHHHHHSTTTTTSSCBSC-----CCHHHHHHHHHHHHHHTCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCchhhhCChhh-----CCHHHHHHHHHhhhhccCCCeEEeccccccCCHHHhhHHHHHHHHHHhcc
Confidence 4568899999999999988887654 9999999999999999999999999999999999999999999999876
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 191 g~tvi~vTHdl~-~~~~~~dri~vl~~G~iv~~G~~~ei 228 (240)
T d3dhwc1 191 GLTILLITHEMD-VVKRICDCVAVISNGELIEQDTVSEV 228 (240)
T ss_dssp CCEEEEEBSCHH-HHHHHCSEEEEEETTEEEEEEETTTT
T ss_pred CCEEEEEcCCHH-HHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999987 68899999999999999999999987
No 2
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=99.95 E-value=4.1e-28 Score=233.12 Aligned_cols=112 Identities=28% Similarity=0.486 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS- 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~- 80 (525)
+++++++++++.++|++.+|+++++ |||||||||+||+||+++|++|+|||||+|||+.++.++++.|+++.++
T Consensus 115 e~~~~v~~~l~~~~l~~~~~~~p~~-----LSGGqkQRv~IAraL~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~ 189 (240)
T d1g2912 115 EIDQRVREVAELLGLTELLNRKPRE-----LSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQL 189 (240)
T ss_dssp HHHHHHHHHHHHHTCGGGTTCCGGG-----SCHHHHHHHHHHHHHHTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChhHhcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhcc
Confidence 4567899999999999988887765 9999999999999999999999999999999999999999999999876
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 190 g~tvi~vTHd~~-~~~~~~drv~vm~~G~iv~~G~~~el 227 (240)
T d1g2912 190 GVTTIYVTHDQV-EAMTMGDRIAVMNRGVLQQVGSPDEV 227 (240)
T ss_dssp TCEEEEEESCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCEEEEEcCCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999987 69999999999999999999998776
No 3
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.95 E-value=4.5e-28 Score=232.69 Aligned_cols=112 Identities=27% Similarity=0.504 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS- 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~- 80 (525)
+.+++++++++.+||++.+|+.+++ |||||||||+|||||+++|++|||||||+|||+.++.++++.|+++.++
T Consensus 116 ~~~~~v~~~l~~~gL~~~~~~~p~~-----LSGGqkQRvaiARaL~~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~ 190 (242)
T d1oxxk2 116 EIRKRVEEVAKILDIHHVLNHFPRE-----LSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRL 190 (242)
T ss_dssp HHHHHHHHHHHHTTCGGGTTSCGGG-----SCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcChHhhhhCChhh-----CCHHHHhHHHHHhHHhhcccceeecCCccCCCHHHHHHHHHHHHHHHhcc
Confidence 4567899999999999988888765 9999999999999999999999999999999999999999999999765
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|+|++||++. ++.++||||++|++|++++.|+|+++
T Consensus 191 g~tvi~vTHd~~-~~~~~~dri~vm~~G~iv~~g~~~el 228 (242)
T d1oxxk2 191 GVTLLVVSHDPA-DIFAIADRVGVLVKGKLVQVGKPEDL 228 (242)
T ss_dssp CCEEEEEESCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCEEEEEECCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999987 69999999999999999999999776
No 4
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.95 E-value=5e-28 Score=232.17 Aligned_cols=112 Identities=26% Similarity=0.426 Sum_probs=104.8
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS- 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~- 80 (525)
+.+++++++++.+||++.+|+.+. +|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|++++++
T Consensus 112 ~~~~~~~~~l~~~~l~~~~~~~~~-----~LSGGq~QRvaiAraL~~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~ 186 (239)
T d1v43a3 112 EIDKRVRWAAELLQIEELLNRYPA-----QLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL 186 (239)
T ss_dssp HHHHHHHHHHHHTTCGGGTTSCTT-----TCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHhhhccCCCceeecCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 456789999999999998888765 49999999999999999999999999999999999999999999999765
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|+|++||++. ++.++||||++|++|++++.|+++++
T Consensus 187 g~tii~vTHd~~-~a~~~~dri~vm~~G~iv~~G~~~el 224 (239)
T d1v43a3 187 KVTTIYVTHDQV-EAMTMGDRIAVMNRGQLLQIGSPTEV 224 (239)
T ss_dssp TCEEEEEESCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCeEEEEeCCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999987 69999999999999999999999876
No 5
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=3.7e-28 Score=232.30 Aligned_cols=112 Identities=28% Similarity=0.486 Sum_probs=86.0
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-c
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQ-S 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~-~ 80 (525)
+.+++++++++.++|++.+|+.+.+ |||||||||+||++|+++|++|+|||||+|||+.++.++++.|+++.+ .
T Consensus 106 ~~~~~v~~~l~~~~l~~~~~~~~~~-----LSGGqkQRvaiAraL~~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~ 180 (232)
T d2awna2 106 VINQRVNQVAEVLQLAHLLDRKPKA-----LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL 180 (232)
T ss_dssp HHHHHHHHHHHHC--------------------------CHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCChhhhhCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5668899999999999999988765 999999999999999999999999999999999999999999999976 5
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|+|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 181 g~tii~vTHd~~-~a~~~~dri~vm~~G~iv~~G~~~el 218 (232)
T d2awna2 181 GRTMIYVTHDQV-EAMTLADKIVVLDAGRVAQVGKPLEL 218 (232)
T ss_dssp CCEEEEEESCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCEEEEEeCCHH-HHHHhCCEEEEEECCEEEEEeCHHHH
Confidence 999999999986 79999999999999999999999876
No 6
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.94 E-value=7.4e-28 Score=229.53 Aligned_cols=111 Identities=23% Similarity=0.372 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-C
Q 037973 3 KKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS-G 81 (525)
Q Consensus 3 ~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~-g 81 (525)
++++++++++.++|++.+|+.+++ |||||||||+||+||+++|++|+|||||+|||+.++.++.+.|+++.++ |
T Consensus 104 ~~~~~~~~l~~~~l~~~~~~~~~~-----LSGG~~QRvaiAraL~~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g 178 (229)
T d3d31a2 104 DPKRVLDTARDLKIEHLLDRNPLT-----LSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNK 178 (229)
T ss_dssp CHHHHHHHHHHTTCTTTTTSCGGG-----SCHHHHHHHHHHHHTTSCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcchhhHhCChhh-----CCHHHhcchhhhhhhhccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCC
Confidence 457899999999999999988765 9999999999999999999999999999999999999999999999765 8
Q ss_pred CEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 82 SIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 82 ~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
.|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 179 ~tii~vtHd~~-~~~~~~drv~vm~~G~iv~~g~~~el 215 (229)
T d3d31a2 179 LTVLHITHDQT-EARIMADRIAVVMDGKLIQVGKPEEI 215 (229)
T ss_dssp CEEEEEESCHH-HHHHHCSEEEEESSSCEEEEECHHHH
T ss_pred cEEEEEcCCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999987 79999999999999999999999876
No 7
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.94 E-value=8.6e-28 Score=230.21 Aligned_cols=112 Identities=25% Similarity=0.416 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-
Q 037973 2 KKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS- 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~- 80 (525)
+++++++++++.+||.+.+|+.+.. |||||||||+||+||+++|++|+|||||+|||+.++..+.+.|++++++
T Consensus 102 ~~~~~v~~~l~~~gl~~~~~~~~~~-----LSGG~kQRvaiAral~~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~ 176 (240)
T d2onka1 102 ERDRRVREMAEKLGIAHLLDRKPAR-----LSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREF 176 (240)
T ss_dssp HHHHHHHHHHHTTTCTTTTTCCGGG-----SCHHHHHHHHHHHHHTTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHhhhhCChhh-----CCHHHHHHHHHHHHHhccCCceEecCccccCCHHHHHHHHHHHHHHHHhc
Confidence 4567899999999999988888765 9999999999999999999999999999999999999999999999875
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 177 g~tvi~vtHd~~-~~~~~adri~vm~~G~ii~~G~~~el 214 (240)
T d2onka1 177 DVPILHVTHDLI-EAAMLADEVAVMLNGRIVEKGKLKEL 214 (240)
T ss_dssp TCCEEEEESCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCeEEEEeCCHH-HHHHhCCEEEEEECCEEEEEecHHHH
Confidence 999999999987 79999999999999999999999776
No 8
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=99.94 E-value=4.2e-27 Score=226.79 Aligned_cols=128 Identities=28% Similarity=0.390 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 037973 3 KKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGS 82 (525)
Q Consensus 3 ~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~ 82 (525)
.+++++++++.++|++..+.++++ ||||||||++||++|+++|++|+|||||+|||+.++.++.++|++++++|+
T Consensus 110 ~~~~~~~~l~~~~l~~~~~~~~~~-----lSgG~~qrv~iA~al~~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~ 184 (238)
T d1vpla_ 110 IEEMVERATEIAGLGEKIKDRVST-----YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGL 184 (238)
T ss_dssp HHHHHHHHHHHHCCGGGGGSBGGG-----CCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCHHHHhhhhhh-----CCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 456788999999999999998876 999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCChhhHHHhcCCCCCCCCChHHHHHHHh
Q 037973 83 IVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFDEFGHPIPENENRTEFALDLI 144 (525)
Q Consensus 83 tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~ 144 (525)
|||++||++. ++..+||||++|++|++++.|+++++.+.+ ...+..+.+.+++
T Consensus 185 tii~~tH~l~-~~~~~~drv~vl~~G~iv~~g~~~el~~~~--------~~~~~~~~f~~~~ 237 (238)
T d1vpla_ 185 TILVSSHNML-EVEFLCDRIALIHNGTIVETGTVEELKERY--------KAQNIEEVFEEVV 237 (238)
T ss_dssp EEEEEECCHH-HHTTTCSEEEEEETTEEEEEEEHHHHHHHT--------TCSSHHHHHHHHH
T ss_pred EEEEEeCCHH-HHHHhCCEEEEEECCEEEEEcCHHHHHhcc--------CCchHHHHHHHhh
Confidence 9999999987 799999999999999999999998875432 2345556665543
No 9
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.94 E-value=1.3e-26 Score=221.35 Aligned_cols=108 Identities=22% Similarity=0.434 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc
Q 037973 2 KKKIRVQALIDQLGLRN-AAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~ 80 (525)
++++++.++|+.++|.+ .+|+.+. .|||||||||+||+||+++|++|+|||||+|||+.++.++++.|++++++
T Consensus 120 ~~~~~~~~~l~~~~L~~~~~~~~p~-----~LSGGqkQRvaIAraL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~ 194 (230)
T d1l2ta_ 120 ERRKRALECLKMAELEERFANHKPN-----QLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEE 194 (230)
T ss_dssp HHHHHHHHHHHHTTCCGGGTTCCGG-----GSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhchhhhhhcCChh-----hCCHHHHHHHHHHhhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHh
Confidence 34567888999999975 4666654 59999999999999999999999999999999999999999999999875
Q ss_pred -CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCC
Q 037973 81 -GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSP 116 (525)
Q Consensus 81 -g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~ 116 (525)
|.|+|++||++. .+ ++||||++|++|++++.|++
T Consensus 195 ~g~tii~vTHd~~-~a-~~~drv~~m~~G~Iv~~g~~ 229 (230)
T d1l2ta_ 195 DGKTVVVVTHDIN-VA-RFGERIIYLKDGEVEREEKL 229 (230)
T ss_dssp TCCEEEEECSCHH-HH-TTSSEEEEEETTEEEEEEEC
T ss_pred hCCEEEEECCCHH-HH-HhCCEEEEEECCEEEEeccC
Confidence 899999999975 44 79999999999999999875
No 10
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.93 E-value=1.2e-26 Score=225.93 Aligned_cols=110 Identities=20% Similarity=0.377 Sum_probs=104.3
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCE
Q 037973 4 KIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSI 83 (525)
Q Consensus 4 ~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~t 83 (525)
.++++++++.+++.+.+|+.+++ |||||||||.||++|+++|++|+|||||+|||+.++.++.+.|++++++|.|
T Consensus 128 ~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~Qrv~iAraL~~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~t 202 (254)
T d1g6ha_ 128 VEKAFKILEFLKLSHLYDRKAGE-----LSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGIT 202 (254)
T ss_dssp HHHHHHHHHHTTCGGGTTSBGGG-----SCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCcchhccCchhh-----CCcHHHHHHHHHHHHHhCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCE
Confidence 35788899999999999998876 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 84 VIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 84 vi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
||+++|++. ++.++||||++|++|++++.|++++.
T Consensus 203 il~vsHdl~-~~~~~~Drv~vm~~G~iv~~g~~~e~ 237 (254)
T d1g6ha_ 203 FLIIEHRLD-IVLNYIDHLYVMFNGQIIAEGRGEEE 237 (254)
T ss_dssp EEEECSCCS-TTGGGCSEEEEEETTEEEEEEESHHH
T ss_pred EEEEeCcHH-HHHHhCCEEEEEeCCEEEEEecHHHH
Confidence 999999997 69999999999999999999998765
No 11
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=99.93 E-value=6.5e-27 Score=225.84 Aligned_cols=111 Identities=28% Similarity=0.447 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcC
Q 037973 3 KKIRVQALIDQL-GLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSG 81 (525)
Q Consensus 3 ~~~~v~~~l~~l-~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g 81 (525)
.+++++++++.+ +|++.+|+.+++ |||||||||+||+||+++|++|+|||||+|||+.++.++.+.|++++++|
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~~~-----LSGG~~Qrv~iAraL~~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g 189 (240)
T d1ji0a_ 115 IKRDLEWIFSLFPRLKERLKQLGGT-----LSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEG 189 (240)
T ss_dssp HHHHHHHHHHHCHHHHTTTTSBSSS-----SCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhChHHHHhCchhh-----CCHHHHHHHHHHHHHHhCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCC
Confidence 445677788877 788888888876 99999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 82 SIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 82 ~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
+|||+++|++. ++.++||||++|++|++++.|+++++
T Consensus 190 ~til~~tH~l~-~~~~~~drv~vl~~G~iv~~g~~~el 226 (240)
T d1ji0a_ 190 TTILLVEQNAL-GALKVAHYGYVLETGQIVLEGKASEL 226 (240)
T ss_dssp CCEEEEESCHH-HHHHHCSEEEEEETTEEEEEEEHHHH
T ss_pred CEEEEEeCCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999986 78999999999999999999999876
No 12
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=99.93 E-value=1.2e-26 Score=225.91 Aligned_cols=112 Identities=26% Similarity=0.455 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc
Q 037973 2 KKKIRVQALIDQLGLRNA-AKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS 80 (525)
Q Consensus 2 ~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~ 80 (525)
+.++++.++++.++|.+. .++.++ .|||||||||+||++|+.+|++|||||||+|||+.++.+++++|++++++
T Consensus 124 ~~~~~~~~~l~~~~l~~~~~~~~p~-----~LSGG~~QRv~iAraL~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~ 198 (258)
T d1b0ua_ 124 DARERALKYLAKVGIDERAQGKYPV-----HLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE 198 (258)
T ss_dssp HHHHHHHHHHHHTTCCHHHHTSCGG-----GSCHHHHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCchhhhccCcc-----cccHHHHHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHhhhhhccc
Confidence 356789999999999764 455554 59999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 81 GSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 81 g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
|.|||++||++. ++.++||||++|++|++++.|+++++
T Consensus 199 g~til~vtHdl~-~~~~~adri~vm~~G~iv~~g~~~ev 236 (258)
T d1b0ua_ 199 GKTMVVVTHEMG-FARHVSSHVIFLHQGKIEEEGDPEQV 236 (258)
T ss_dssp TCCEEEECSCHH-HHHHHCSEEEEEETTEEEEEECHHHH
T ss_pred CCceEEEeCCHH-HHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999987 68999999999999999999999876
No 13
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=99.92 E-value=1.1e-25 Score=216.22 Aligned_cols=111 Identities=26% Similarity=0.404 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 037973 3 KKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIH-------DPILLFLDEPTSGLDSTSAYMVVKVLQ 75 (525)
Q Consensus 3 ~~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~-------~p~illlDEPtsgLD~~~~~~i~~~l~ 75 (525)
++++++++++.++|.+..++.+++ ||||||||++||++|++ +|+||+|||||+|||+.++..+.+.|+
T Consensus 102 ~~~~~~~~~~~~~l~~~~~~~~~~-----LSgG~~Qrv~iA~al~~~~p~~~p~p~llllDEPt~gLD~~~~~~i~~~i~ 176 (231)
T d1l7vc_ 102 RTELLNDVAGALALDDKLGRSTNQ-----LSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILS 176 (231)
T ss_dssp CHHHHHHHHHHTTCTTTTTSBGGG-----CCHHHHHHHHHHHHHHHHCTTTCTTCCEEEESSCSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHhHhCcChhh-----cCHHHHHHHHHHHHHHhhCcccCCCCCEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 467889999999999988888765 99999999999999997 779999999999999999999999999
Q ss_pred HHHHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 76 RIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 76 ~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
+++++|.|||+++|+++ ++.++|||+++|++|++++.|+++++
T Consensus 177 ~l~~~g~tii~vtHdl~-~~~~~~dri~vl~~G~iv~~G~~~ev 219 (231)
T d1l7vc_ 177 ALCQQGLAIVMSSHDLN-HTLRHAHRAWLLKGGKMLASGRREEV 219 (231)
T ss_dssp HHHHTTCEEEECCCCHH-HHHHHCSBCCBEETTEECCCSBHHHH
T ss_pred HHHhCCCEEEEEeCCHH-HHHHHCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999987 69999999999999999999998776
No 14
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.90 E-value=2.3e-24 Score=209.48 Aligned_cols=113 Identities=24% Similarity=0.379 Sum_probs=96.6
Q ss_pred HHHHHHHHHHcCCccc-------ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 037973 4 KIRVQALIDQLGLRNA-------AKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQR 76 (525)
Q Consensus 4 ~~~v~~~l~~l~L~~~-------~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~ 76 (525)
+++++++++..++.+. .++.+|+ .+..||||||||++|||||+.+|+||+||||||+||+.+...+++.|++
T Consensus 119 ~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~-~~~~LSGGqkQRvaiARal~~~p~ililDEpts~LD~~~~~~i~~~l~~ 197 (253)
T d3b60a1 119 REQIEEAARMAYAMDFINKMDNGLDTIIGE-NGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDE 197 (253)
T ss_dssp HHHHHHHHHTTTCHHHHHHSTTGGGSBCCT-TSCSSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHhccccchhhhcC-CCCCcCHHHHHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHHHHH
Confidence 3456666666665432 4666764 4678999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCChh
Q 037973 77 IAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLP 120 (525)
Q Consensus 77 l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~~ 120 (525)
+.+ ++|+|+++|+++ ..+.||+|++|++|++++.|+++++.
T Consensus 198 l~~-~~Tvi~itH~l~--~~~~~D~v~vl~~G~Iv~~G~~~eLl 238 (253)
T d3b60a1 198 LQK-NRTSLVIAHRLS--TIEQADEIVVVEDGIIVERGTHSELL 238 (253)
T ss_dssp HHT-TSEEEEECSCGG--GTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred hcc-CCEEEEEECCHH--HHHhCCEEEEEECCEEEEECCHHHHH
Confidence 864 899999999986 34679999999999999999998764
No 15
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=1.2e-23 Score=202.66 Aligned_cols=111 Identities=30% Similarity=0.537 Sum_probs=94.0
Q ss_pred HHHHHHHHHcCCc-------ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 037973 5 IRVQALIDQLGLR-------NAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRI 77 (525)
Q Consensus 5 ~~v~~~l~~l~L~-------~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l 77 (525)
+++.+.++..++. .-.++.+|. .++.||||||||++|||+|+.+|+||+||||||+||+.+...+++.|+++
T Consensus 107 ~~~~~~~~~~~~~~~i~~~~~~~~t~i~~-~g~~LSGGq~QRvalARal~~~p~ililDEpts~LD~~~~~~i~~~l~~l 185 (241)
T d2pmka1 107 EKVIYAAKLAGAHDFISELREGYNTIVGE-QGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKI 185 (241)
T ss_dssp HHHHHHHHHHTCHHHHTTSTTGGGSBCST-TTTCCCHHHHHHHHHHHHHTTCCSEEEECCCCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHhhhcchhhhcCC-CCCccCHHHHHHHhhhhhhhcccchhhhhCCccccCHHHHHHHHHHHHHH
Confidence 3455555554443 345666664 45679999999999999999999999999999999999999999999998
Q ss_pred HHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCCh
Q 037973 78 AQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNL 119 (525)
Q Consensus 78 ~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~ 119 (525)
.+ |+|+|+++|+++ ..+.||+|++|++|++++.|+++++
T Consensus 186 ~~-~~Tvi~itH~l~--~~~~~D~i~vl~~G~Iv~~G~~~el 224 (241)
T d2pmka1 186 CK-GRTVIIIAHRLS--TVKNADRIIVMEKGKIVEQGKHKEL 224 (241)
T ss_dssp HT-TSEEEEECSSGG--GGTTSSEEEEEETTEEEEEECHHHH
T ss_pred hC-CCEEEEEECCHH--HHHhCCEEEEEECCEEEEECCHHHH
Confidence 64 899999999986 3467999999999999999998776
No 16
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=6.4e-24 Score=206.03 Aligned_cols=103 Identities=27% Similarity=0.451 Sum_probs=90.9
Q ss_pred CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCCch
Q 037973 15 GLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQS-GSIVIMSIHQPSY 93 (525)
Q Consensus 15 ~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~ 93 (525)
+|.+-.++.++. .+..||||||||++|||||+++|+||+||||||+||+.+..++++.|+++.++ |+|+|+++|+++
T Consensus 136 ~l~~g~~~~i~~-~~~~LSGGqkQRvaiARal~~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~- 213 (251)
T d1jj7a_ 136 GLPQGYDTEVDE-AGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS- 213 (251)
T ss_dssp TSTTGGGCBCCS-SCSSSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHH-
T ss_pred hccccchhhHhc-cCccCChhHceEEEEeeccccCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHH-
Confidence 344456777764 45679999999999999999999999999999999999999999999998764 899999999985
Q ss_pred HHHhhcCeEEEeeCCcEEEecCCCChh
Q 037973 94 RILGLLDRMIFLSRGQTVYSGSPMNLP 120 (525)
Q Consensus 94 ~v~~~~d~v~~l~~G~~v~~G~~~~~~ 120 (525)
..+.||||++|++|++++.|+++++.
T Consensus 214 -~~~~aDrI~vl~~G~iv~~Gt~~eLl 239 (251)
T d1jj7a_ 214 -LVEQADHILFLEGGAIREGGTHQQLM 239 (251)
T ss_dssp -HHHTCSEEEEEETTEEEEEECHHHHH
T ss_pred -HHHhCCEEEEEECCEEEEECCHHHHH
Confidence 44679999999999999999998764
No 17
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=99.89 E-value=6.2e-24 Score=205.03 Aligned_cols=112 Identities=31% Similarity=0.465 Sum_probs=94.7
Q ss_pred HHHHHHHHHcCCc-------ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 037973 5 IRVQALIDQLGLR-------NAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRI 77 (525)
Q Consensus 5 ~~v~~~l~~l~L~-------~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l 77 (525)
+.+.+.++..++. +..++.+|+ ....||||||||++|||||+.+|+||+||||||+||+.++.++++.|+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~g~~LSGGqkQRv~iARal~~~p~ililDEpts~LD~~~~~~i~~~l~~l 185 (242)
T d1mv5a_ 107 EDLWQVLDLAFARSFVENMPDQLNTEVGE-RGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSL 185 (242)
T ss_dssp HHHHHHHHHHTCTTTTTSSTTGGGCEEST-TSBCCCHHHHHHHHHHHHHHHCCSEEEEECCSCSSCSSSCCHHHHHHHHH
T ss_pred hhHHHHHHHHHhhhhhccCcccccccccC-CCCCCCHHHHHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHH
Confidence 3455555555443 345666765 34579999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCChh
Q 037973 78 AQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLP 120 (525)
Q Consensus 78 ~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~~ 120 (525)
+ +|+|+|+++|+++ .+ +.||+|++|++|++++.|+++++.
T Consensus 186 ~-~~~Tvi~itH~l~-~~-~~~D~i~vl~~G~iv~~G~~~eLl 225 (242)
T d1mv5a_ 186 M-KGRTTLVIAHRLS-TI-VDADKIYFIEKGQITGSGKHNELV 225 (242)
T ss_dssp H-TTSEEEEECCSHH-HH-HHCSEEEEEETTEECCCSCHHHHH
T ss_pred c-CCCEEEEEECCHH-HH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 7 5899999999986 34 569999999999999999998764
No 18
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.89 E-value=1.9e-23 Score=202.70 Aligned_cols=113 Identities=24% Similarity=0.399 Sum_probs=97.7
Q ss_pred HHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 037973 4 KIRVQALIDQLGLRN-------AAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQR 76 (525)
Q Consensus 4 ~~~v~~~l~~l~L~~-------~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~ 76 (525)
++++.++++..++.+ -.|+.+|+ ....||||||||++|||||+.+|+||+||||||+||+.+...+++.|++
T Consensus 121 ~~~~~~al~~~~l~~~i~~lp~gl~t~i~~-~g~~LSgGq~QRi~iARal~~~p~ililDEpts~LD~~t~~~i~~~l~~ 199 (255)
T d2hyda1 121 DEEVVEAAKMANAHDFIMNLPQGYDTEVGE-RGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDV 199 (255)
T ss_dssp HHHHHHHHHHTTCHHHHHTSTTGGGCBCCG-GGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHhccccccchhcC-CCCCcCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHH
Confidence 456677777777654 34667765 3467999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCChh
Q 037973 77 IAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLP 120 (525)
Q Consensus 77 l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~~ 120 (525)
+.+ ++|+|+++|+++ ..+.||+|++|++|+++..|+++++.
T Consensus 200 l~~-~~TvI~itH~~~--~~~~~D~ii~l~~G~iv~~G~~~eLl 240 (255)
T d2hyda1 200 LSK-DRTTLIVAHRLS--TITHADKIVVIENGHIVETGTHRELI 240 (255)
T ss_dssp HTT-TSEEEEECSSGG--GTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred Hhc-CCEEEEEeCCHH--HHHhCCEEEEEECCEEEEECCHHHHH
Confidence 864 899999999986 34679999999999999999998763
No 19
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.9e-22 Score=198.65 Aligned_cols=102 Identities=25% Similarity=0.369 Sum_probs=86.5
Q ss_pred CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHH
Q 037973 16 LRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRI 95 (525)
Q Consensus 16 L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v 95 (525)
+.+..++.+|. ....|||||||||+|||||+++|+||+|||||++||+.+..++++.+.+..++++|+|+++|+++ .
T Consensus 144 l~~~~~~~~~~-~~~~LSgGqkQRv~lARaL~~~p~illLDEPts~LD~~~~~~i~~~~~~~~~~~~tvi~itH~~~--~ 220 (281)
T d1r0wa_ 144 FAEQDNTVLGE-GGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKME--H 220 (281)
T ss_dssp STTGGGCEECT-TCTTSCHHHHHHHHHHHHHHSCCSEEEEESCCCSSCHHHHHHHHHHCCCCCTTTSEEEEECSCHH--H
T ss_pred chhhhhhhhhh-hccCCCHHHHHHHHHHHHHHhCccchhhcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEechHH--H
Confidence 33445666654 34569999999999999999999999999999999999999999865444456899999999974 4
Q ss_pred HhhcCeEEEeeCCcEEEecCCCChh
Q 037973 96 LGLLDRMIFLSRGQTVYSGSPMNLP 120 (525)
Q Consensus 96 ~~~~d~v~~l~~G~~v~~G~~~~~~ 120 (525)
.+.||||++|++|++++.|+++++.
T Consensus 221 l~~aDrI~vl~~G~i~~~Gt~~eL~ 245 (281)
T d1r0wa_ 221 LRKADKILILHQGSSYFYGTFSELQ 245 (281)
T ss_dssp HHTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHhCCEEEEEECCEEEEECCHHHHh
Confidence 5789999999999999999998864
No 20
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.74 E-value=2e-18 Score=161.60 Aligned_cols=94 Identities=23% Similarity=0.370 Sum_probs=77.5
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCE
Q 037973 4 KIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSI 83 (525)
Q Consensus 4 ~~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~t 83 (525)
++.+.+.++.+++.+.. ..+++ ||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++.+++.+
T Consensus 104 ~~~~~~~l~~~~~~~~~-~~~~~-----LSgG~~qrv~ia~al~~~~~llllDEPt~gLD~~~~~~i~~~l~~~~~~~~~ 177 (200)
T d1sgwa_ 104 KNEIMDALESVEVLDLK-KKLGE-----LSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGI 177 (200)
T ss_dssp HHHHHHHHHHTTCCCTT-SBGGG-----SCHHHHHHHHHHHHTTSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHHcCCcccc-cccCc-----CCCcHHHHHHHHHHHhcCCCEEEEcCcccccCHHHHHHHHHHHHHHHhCCCE
Confidence 45677888888876543 44554 9999999999999999999999999999999999999999999999876555
Q ss_pred EEEEeCCCchHHHhhcCeEEEeeC
Q 037973 84 VIMSIHQPSYRILGLLDRMIFLSR 107 (525)
Q Consensus 84 vi~~~H~~~~~v~~~~d~v~~l~~ 107 (525)
+|+++||. .++||++..|++
T Consensus 178 ~ii~~~~~----l~~~D~~~~l~~ 197 (200)
T d1sgwa_ 178 VIISSREE----LSYCDVNENLHK 197 (200)
T ss_dssp EEEEESSC----CTTSSEEEEGGG
T ss_pred EEEEEech----hhhcchhhheee
Confidence 55555542 247999999865
No 21
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.51 E-value=2.1e-14 Score=139.83 Aligned_cols=80 Identities=29% Similarity=0.428 Sum_probs=72.3
Q ss_pred CCCCCHHHHH------HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeE
Q 037973 29 HRGVSGGERR------RVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRM 102 (525)
Q Consensus 29 ~~glSgGerk------Rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v 102 (525)
+..+|||||| |+++|+++..+|++++|||||++||+..+..+++.|+++.+++++||++||+|. +.+.+|+|
T Consensus 199 ~~~lSgGe~~~~~la~~la~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~--~~~~~D~i 276 (292)
T g1f2t.1 199 LTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE--LKDAADHV 276 (292)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGG--GGGGCSEE
T ss_pred hhhcchHHHHHHHHHHHHHHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHH--HHHhCCEE
Confidence 3569999999 888999999999999999999999999999999999999988899999999975 67889999
Q ss_pred EEee--CCcE
Q 037973 103 IFLS--RGQT 110 (525)
Q Consensus 103 ~~l~--~G~~ 110 (525)
+.++ +|..
T Consensus 277 i~l~~~~g~~ 286 (292)
T g1f2t.1 277 IRISLENGSS 286 (292)
T ss_dssp EEEEEETTEE
T ss_pred EEEEecCCEE
Confidence 9994 5643
No 22
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.22 E-value=1.2e-11 Score=121.88 Aligned_cols=77 Identities=27% Similarity=0.416 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEE
Q 037973 30 RGVSGGERRRVSIGIDII------HDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMI 103 (525)
Q Consensus 30 ~glSgGerkRv~ia~~l~------~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~ 103 (525)
..+|||||+++.+|..++ .+|+++++|||+++||+..+..+++.|+++++++..+|+|||+|. +.+.+|+++
T Consensus 277 ~~lS~Ge~~~~~la~~l~~~~~~~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~--~~~~~d~~~ 354 (369)
T g1ii8.1 277 TFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE--LKDAADHVI 354 (369)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGG--GGGTSSEEE
T ss_pred eccchHHHHHHHHHHHHHHHHhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHH--HHHhCCEEE
Confidence 459999999999987665 589999999999999999999999999999988889999999985 778899999
Q ss_pred Ee--eCC
Q 037973 104 FL--SRG 108 (525)
Q Consensus 104 ~l--~~G 108 (525)
.+ .+|
T Consensus 355 ~v~~~~g 361 (369)
T g1ii8.1 355 RISLENG 361 (369)
T ss_dssp EEEECSS
T ss_pred EEEEeCC
Confidence 98 446
No 23
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.77 E-value=5.1e-09 Score=106.44 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=62.9
Q ss_pred CCCCHHHHHHHHHHHHH----hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEe
Q 037973 30 RGVSGGERRRVSIGIDI----IHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFL 105 (525)
Q Consensus 30 ~glSgGerkRv~ia~~l----~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l 105 (525)
+.+|||||.++++|..+ ..++++++||||+++||+..+..+.+.|++++..+.-+|++||+|. +.+.+|+++.+
T Consensus 331 ~~lSgGEk~~~~lal~lal~~~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~~--~~~~ad~~~~V 408 (427)
T d1w1wa_ 331 EYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNT--MFEKSDALVGV 408 (427)
T ss_dssp GGSCHHHHHHHHHHHHHHHHTSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHH--HHTTCSEEEEE
T ss_pred hhhccchHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCHH--HHHhcccEEEE
Confidence 45799999998887644 3467799999999999999999999999998755556999999984 88999997755
No 24
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.09 E-value=5.6e-06 Score=79.96 Aligned_cols=76 Identities=24% Similarity=0.299 Sum_probs=63.8
Q ss_pred CCCCHHHHHHHHHHHHH----hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEE-
Q 037973 30 RGVSGGERRRVSIGIDI----IHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIF- 104 (525)
Q Consensus 30 ~glSgGerkRv~ia~~l----~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~- 104 (525)
..+|+|||+...++..+ ...|.++++|||-++|||..+..+.+.|++.++ +.-||+|||.|. +.+.+|++..
T Consensus 218 ~~~~~g~~~l~~~~~~~~~~~~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~-~~QviitTHsp~--~~~~~d~~~~v 294 (308)
T d1e69a_ 218 SLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSK-HTQFIVITHNKI--VMEAADLLHGV 294 (308)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTT-TSEEEEECCCTT--GGGGCSEEEEE
T ss_pred hhhhHHHhhHHHHHhhhhhhhhccCchhhhhhccccCCHHHHHHHHHHHHHhcc-CCEEEEEECCHH--HHHhcccEEEE
Confidence 45899999998887654 346799999999999999999999999999875 466999999985 6788999865
Q ss_pred -eeCC
Q 037973 105 -LSRG 108 (525)
Q Consensus 105 -l~~G 108 (525)
+.+|
T Consensus 295 ~~~~g 299 (308)
T d1e69a_ 295 TMVNG 299 (308)
T ss_dssp EESSS
T ss_pred EEeCC
Confidence 4556
No 25
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.03 E-value=9.2e-07 Score=78.42 Aligned_cols=79 Identities=9% Similarity=-0.023 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCCchHHHhhcCeEEEeeCCcE
Q 037973 32 VSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQ-SGSIVIMSIHQPSYRILGLLDRMIFLSRGQT 110 (525)
Q Consensus 32 lSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~ 110 (525)
+|+|+++|..+++++..+|+++++|||... ........+.+.++.+ .+.++|+++|+.. ...++|++..+.+|++
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~vlllDE~~~~--~~~~~~~~~~l~~~l~~~~~~il~~~h~~~--~~~~~~~i~~~~~~~i 157 (178)
T d1ye8a1 82 ELAIPILERAYREAKKDRRKVIIIDEIGKM--ELFSKKFRDLVRQIMHDPNVNVVATIPIRD--VHPLVKEIRRLPGAVL 157 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSTT--GGGCHHHHHHHHHHHTCTTSEEEEECCSSC--CSHHHHHHHTCTTCEE
T ss_pred hhhhhhHHHHHHHHHhcCCCceeecCCCcc--chhhHHHHHHHHHHhccCCCEEEEEEccHH--HHHhhceEEEEeCCEE
Confidence 689999999999999999999999998443 3345566666666654 5789999999964 5678999999999999
Q ss_pred EEec
Q 037973 111 VYSG 114 (525)
Q Consensus 111 v~~G 114 (525)
+.-+
T Consensus 158 ~~v~ 161 (178)
T d1ye8a1 158 IELT 161 (178)
T ss_dssp EECC
T ss_pred EEEC
Confidence 7654
No 26
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.12 E-value=0.00078 Score=64.90 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHHHHh----hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEe
Q 037973 30 RGVSGGERRRVSIGIDII----HDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFL 105 (525)
Q Consensus 30 ~glSgGerkRv~ia~~l~----~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l 105 (525)
..+|+|++....++..+. ..|.++++|||-.+|++..+..+.+.+++++++ .=+|++||.|. +.+..|++..+
T Consensus 223 ~~ls~~~~~l~~l~~~~~~~~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~-~Q~iitTh~~~--~~~~~~~l~~i 299 (329)
T g1xew.1 223 EAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKE-SQFIVITLRDV--MMANADKIIGV 299 (329)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHSCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTT-SEEEEECCCHH--HHHHCSEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHhhcccchhhhhhHHhhcCHHHHHHHHHHHHHhccC-CeEEEEeCCHH--HHHhhHhhcCE
Confidence 458999998877666543 688999999999999999999999999998754 45899999985 56788998877
Q ss_pred e
Q 037973 106 S 106 (525)
Q Consensus 106 ~ 106 (525)
.
T Consensus 300 ~ 300 (329)
T g1xew.1 300 S 300 (329)
T ss_dssp E
T ss_pred e
Confidence 3
No 27
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=92.02 E-value=0.19 Score=45.24 Aligned_cols=63 Identities=17% Similarity=0.226 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCCchHHHhh
Q 037973 34 GGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVK-VLQRIAQSGSIVIMSIHQPSYRILGL 98 (525)
Q Consensus 34 gGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~-~l~~l~~~g~tvi~~~H~~~~~v~~~ 98 (525)
..|-+|+.-....+++..++++||+.+|=|+.....+.. .++.+.+.+..++++||+. ++.++
T Consensus 99 ~~el~~~~~il~~~~~~sLvliDE~~~gT~~~eg~ala~aile~L~~~~~~~i~tTH~~--eL~~l 162 (224)
T d1ewqa2 99 MVEMEEVALILKEATENSLVLLDEVGRGTSSLDGVAIATAVAEALHERRAYTLFATHYF--ELTAL 162 (224)
T ss_dssp HHHHHHHHHHHHHCCTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEECCCH--HHHTC
T ss_pred HHhHHHHHHHhccCCCCcEEeecccccCcchhhhcchHHHHHHHHhhcCcceEEeeech--hhhhh
Confidence 467788887777788889999999999999987766554 4566677788899999985 35544
No 28
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.04 E-value=0.61 Score=42.05 Aligned_cols=59 Identities=12% Similarity=0.114 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHc-CCEEEEEeCCCc
Q 037973 34 GGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVK-VLQRIAQS-GSIVIMSIHQPS 92 (525)
Q Consensus 34 gGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~-~l~~l~~~-g~tvi~~~H~~~ 92 (525)
..|-+|++-...-+++..++++||+.+|=|+.....+.. .++.+..+ +..+++++|...
T Consensus 105 ~~E~~~~~~il~~~~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~~~~~~~i~tTH~~~ 165 (234)
T d1wb9a2 105 MVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFE 165 (234)
T ss_dssp HHHHHHHHHHHHHCCTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEECSCGG
T ss_pred HHHHHHHHHHHHhcccccEEeecccccCCChhhhhHHHHHhhhhhhccccceEEEecchHH
Confidence 567788877777788889999999999999999988765 46677665 456888888753
No 29
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=84.54 E-value=0.42 Score=40.45 Aligned_cols=67 Identities=22% Similarity=0.130 Sum_probs=50.8
Q ss_pred HHHHHHHhh--CCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEeeC
Q 037973 40 VSIGIDIIH--DPILLFLDEPTSG--LDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR 107 (525)
Q Consensus 40 v~ia~~l~~--~p~illlDEPtsg--LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~ 107 (525)
+..|++.+. +.++++|||-... ++--...+++++|+. ..++.-+|+|-++++.++.+.+|.|.-|..
T Consensus 83 ~~~a~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~-rp~~~evVlTGr~~p~~L~e~ADlVTEm~~ 153 (157)
T d1g5ta_ 83 WQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNA-RPGHQTVIITGRGCHRDILDLADTVSELRP 153 (157)
T ss_dssp HHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHT-SCTTCEEEEECSSCCHHHHHHCSEEEECCC
T ss_pred HHHHHHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHh-CCCCCEEEEECCCCCHHHHHhcceeeeeee
Confidence 444555544 4799999998873 333556788888865 345678999999999999999999988764
No 30
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=51.02 E-value=22 Score=31.12 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred hhCCCEEEEeCCC-----CCC--CHHHHHHHHHHHHHHHHc-CCEEEEEeC
Q 037973 47 IHDPILLFLDEPT-----SGL--DSTSAYMVVKVLQRIAQS-GSIVIMSIH 89 (525)
Q Consensus 47 ~~~p~illlDEPt-----sgL--D~~~~~~i~~~l~~l~~~-g~tvi~~~H 89 (525)
-.+|+++++|--+ .+- +......+++.|+++|++ +.+|++++|
T Consensus 145 ~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~vi~~~q 195 (277)
T d1cr2a_ 145 GLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICH 195 (277)
T ss_dssp TTCCSEEEEEEEEC----------CHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred ccCcceEEEcccccccccccccchhHHHHHHHHHHHHHhhhccccceeecc
Confidence 4579999999431 111 113456678889999876 556655554
No 31
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=46.48 E-value=21 Score=31.30 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=32.3
Q ss_pred CCCHHHH-HHHH--HHHHHhhCCCEEEEeCC-----CCCCCHHHHHHHHHHHHHHHH----cC-C-EEEEEeCCCc
Q 037973 31 GVSGGER-RRVS--IGIDIIHDPILLFLDEP-----TSGLDSTSAYMVVKVLQRIAQ----SG-S-IVIMSIHQPS 92 (525)
Q Consensus 31 glSgGer-kRv~--ia~~l~~~p~illlDEP-----tsgLD~~~~~~i~~~l~~l~~----~g-~-tvi~~~H~~~ 92 (525)
|.+++.. +++. +..|--..|.||++||- ...-++.....+++.+..+-+ .+ + .||.+|.+|.
T Consensus 79 g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~ 154 (246)
T d1d2na_ 79 GFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKD 154 (246)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHH
T ss_pred cccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChh
Confidence 4677664 4442 33444567899999993 333323223344444444332 22 2 3556777763
No 32
>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}
Probab=44.13 E-value=17 Score=30.44 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEeeCC
Q 037973 68 YMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRG 108 (525)
Q Consensus 68 ~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G 108 (525)
.++++.++...+.|..+|.+|..+.+.+.+++|.++.+..+
T Consensus 93 ~~~i~~~~~ak~~g~~iI~IT~~~~s~La~~ad~~i~i~~~ 133 (186)
T d1m3sa_ 93 KSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGS 133 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECSCC
T ss_pred hhhHHHHHHHHHCCCCEEEEecCCCchhhHhCCEEEEeCCC
Confidence 67888888888889999999988888999999999987653
No 33
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=36.39 E-value=30 Score=30.10 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHhhCCCEEEEeCCCC-----CCCHHHHHHHHHHHHHHHHc-CCEEEEEeCC
Q 037973 45 DIIHDPILLFLDEPTS-----GLDSTSAYMVVKVLQRIAQS-GSIVIMSIHQ 90 (525)
Q Consensus 45 ~l~~~p~illlDEPts-----gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~ 90 (525)
.-..+|+++++|.-+. --|.....+++..|+.+++. +.++|++.|.
T Consensus 128 ~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~v~H~ 179 (274)
T d1nlfa_ 128 RAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHA 179 (274)
T ss_dssp HHHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HhccCccEEecCchhhhccccccchhhHHHHHHHHHHHhhcCCCceehhhhc
Confidence 3457999999996542 12666677888888888865 6777777554
No 34
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.92 E-value=49 Score=28.98 Aligned_cols=57 Identities=21% Similarity=0.299 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCC---------CHHHHHHHH-HHHHHH---H-HcCCEEEEEeCCCc
Q 037973 36 ERRRVSIGIDIIHDPILLFLDEPTSGL---------DSTSAYMVV-KVLQRI---A-QSGSIVIMSIHQPS 92 (525)
Q Consensus 36 erkRv~ia~~l~~~p~illlDEPtsgL---------D~~~~~~i~-~~l~~l---~-~~g~tvi~~~H~~~ 92 (525)
++-|-.+..|-...|.++++||--.=+ ......++. .+++.+ . +.+.-+|.++++|.
T Consensus 87 ~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~ 157 (265)
T d1r7ra3 87 ANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 157 (265)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCT
T ss_pred HHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCch
Confidence 333444666778899999999964222 222223233 333333 2 23556888999886
No 35
>d1vima_ c.80.1.3 (A:) Hypothetical protein AF1796 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.61 E-value=30 Score=28.84 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEeeCC
Q 037973 68 YMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRG 108 (525)
Q Consensus 68 ~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G 108 (525)
.++++.++...+.|..+|.+|..+.+.+.+++|.++....+
T Consensus 96 ~~~i~~~~~ak~~g~~vI~IT~~~~s~l~~~ad~~l~i~~~ 136 (192)
T d1vima_ 96 TSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGK 136 (192)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCSS
T ss_pred hhhHHHHHHHHhhcccceeeeeccccccccccceEEEecCC
Confidence 67888888887889889988888888899999999886643
No 36
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=25.19 E-value=77 Score=27.37 Aligned_cols=48 Identities=19% Similarity=0.416 Sum_probs=25.9
Q ss_pred HHhhCCCEEEEeCC----------CCCCCHHHHHHHHHHHHHHH---HcCC-EEEEEeCCCc
Q 037973 45 DIIHDPILLFLDEP----------TSGLDSTSAYMVVKVLQRIA---QSGS-IVIMSIHQPS 92 (525)
Q Consensus 45 ~l~~~p~illlDEP----------tsgLD~~~~~~i~~~l~~l~---~~g~-tvi~~~H~~~ 92 (525)
+--..|.||++||- ..+-+......+-++++.+- .+.. .||.+|.+|.
T Consensus 97 a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 97 AKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPD 158 (247)
T ss_dssp HTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGG
T ss_pred HHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcc
Confidence 44568999999983 23334444444444555543 2223 4566888765
No 37
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=24.98 E-value=69 Score=27.94 Aligned_cols=51 Identities=22% Similarity=0.370 Sum_probs=28.5
Q ss_pred HHHHHhhCCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHH---Hc-CCEEEEEeCCCc
Q 037973 42 IGIDIIHDPILLFLDEPTS----------GLDSTSAYMVVKVLQRIA---QS-GSIVIMSIHQPS 92 (525)
Q Consensus 42 ia~~l~~~p~illlDEPts----------gLD~~~~~~i~~~l~~l~---~~-g~tvi~~~H~~~ 92 (525)
+..|--..|.||++||-=+ +-+......+-+++..+- .+ +..+|.+|.+|.
T Consensus 97 f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~ 161 (256)
T d1lv7a_ 97 FEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 161 (256)
T ss_dssp HHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTT
T ss_pred HHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcc
Confidence 4455567899999998611 122233333334444442 22 345777899875
No 38
>d1lrza2 d.108.1.4 (A:1-165) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}
Probab=24.98 E-value=44 Score=27.28 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHHHhhcCeEEEeeCCcEEEecCCCChhhHHHhcCCC
Q 037973 62 LDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFDEFGHP 129 (525)
Q Consensus 62 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v~~~~d~v~~l~~G~~v~~G~~~~~~~~~~~~g~~ 129 (525)
-|......+++.|++.+++.+.+.+-+ +|. .++...| .+|+.+...+.+++++.++++|+.
T Consensus 81 ~d~~ll~~~l~~L~~~akk~~a~~l~i-~P~-v~~~~~~-----~dg~~~~~~~~~~~i~~l~~lG~~ 141 (165)
T d1lrza2 81 ENQELVHFFFNELSKYVKKHRCLYLHI-DPY-LPYQYLN-----HDGEITGNAGNDWFFDKMSNLGFE 141 (165)
T ss_dssp TCHHHHHHHHHHHHHHHHTTTEEEEEE-CCC-CEEEEEC-----TTSCEEEECSCTHHHHHHHHTTCE
T ss_pred cCHHHHHHHHHHHHHHHHHCCEEEEEe-ccc-hhhhccc-----cCCcccCCCCcHHHHHHHHHCCCE
Confidence 466777788999999998877665544 454 2333333 578888777777788888888874
No 39
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=24.17 E-value=64 Score=24.19 Aligned_cols=72 Identities=17% Similarity=0.287 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q 037973 5 IRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIV 84 (525)
Q Consensus 5 ~~v~~~l~~l~L~~~~~~~vg~~~~~glSgGerkRv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~l~~~g~tv 84 (525)
+.+.+.|+..|.+-. +. -+.|+.- +...+ -.+|+++++|=-.-+.|. .++++.+++....-..|
T Consensus 15 ~~l~~~L~~~g~~v~-----~~-----a~~~~~a-l~~~~--~~~~dliilD~~mp~~~G---~e~~~~ir~~~~~~pvi 78 (118)
T d1u0sy_ 15 MMLKDIITKAGYEVA-----GE-----ATNGREA-VEKYK--ELKPDIVTMDITMPEMNG---IDAIKEIMKIDPNAKII 78 (118)
T ss_dssp HHHHHHHHHTTCEEE-----EE-----ESSHHHH-HHHHH--HHCCSEEEEECSCGGGCH---HHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHcCCceE-----EE-----ECCHHHH-HHHHH--hccCCEEEEecCCCCCCH---HHHHHHHHHhCCCCcEE
Confidence 456677777776421 11 2334432 11222 368999999987777654 45555666544333445
Q ss_pred EEEeCCCc
Q 037973 85 IMSIHQPS 92 (525)
Q Consensus 85 i~~~H~~~ 92 (525)
++|.|.-.
T Consensus 79 ~ls~~~~~ 86 (118)
T d1u0sy_ 79 VCSAMGQQ 86 (118)
T ss_dssp EEECTTCH
T ss_pred EEEccCCH
Confidence 56666543
No 40
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=23.84 E-value=39 Score=28.55 Aligned_cols=60 Identities=15% Similarity=0.195 Sum_probs=40.5
Q ss_pred hCCCEEEEeCCCC---CCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCC---------chHHHhhcCeEEEeeC
Q 037973 48 HDPILLFLDEPTS---GLDSTSAYMVVKVLQRIAQ-SGSIVIMSIHQP---------SYRILGLLDRMIFLSR 107 (525)
Q Consensus 48 ~~p~illlDEPts---gLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~---------~~~v~~~~d~v~~l~~ 107 (525)
.+|++++.|--+. +.+.......+..|.++++ .+.+++++.|.. ...+..++|-++.+..
T Consensus 115 ~~~~~vviDs~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ad~vi~l~~ 187 (242)
T d1tf7a2 115 FKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQY 187 (242)
T ss_dssp TCCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSSSCCCSSCSSCCTTTCSEEEEEEE
T ss_pred cCCceeeeecchhhhcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeeEeeccccccCCcceeeecceEEEEEE
Confidence 4799999996544 4466666666666666665 578888877742 1235667888888753
No 41
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.28 E-value=16 Score=30.41 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 037973 29 HRGVSGGERRRVSIGIDIIHDPILLFLDEPTS 60 (525)
Q Consensus 29 ~~glSgGerkRv~ia~~l~~~p~illlDEPts 60 (525)
|-..+..||+++.-|..++.=..+=|+||||+
T Consensus 144 Pa~f~~~qr~~~~~Aa~~AGl~~~~li~EP~A 175 (185)
T d1bupa1 144 PAYFNDSQRQATKDAGTIAGLNVLRIINEPTA 175 (185)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHH
Confidence 45589999999999999998888889999987
No 42
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=21.31 E-value=91 Score=26.11 Aligned_cols=50 Identities=10% Similarity=0.163 Sum_probs=39.1
Q ss_pred HhhCCCEEEEeCCCC-CCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCchHH
Q 037973 46 IIHDPILLFLDEPTS-GLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRI 95 (525)
Q Consensus 46 l~~~p~illlDEPts-gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~v 95 (525)
...+.++|++|+-=. .-+...+..+.+++..+...|+.+|+++..+..+.
T Consensus 94 ~~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l 144 (213)
T d1l8qa2 94 MYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKL 144 (213)
T ss_dssp HHHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGC
T ss_pred HHhhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhc
Confidence 355789999998743 23577788899999998888999999888876543
Done!