Your job contains 1 sequence.
>037974
MAARPGIILFPAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGS
ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL
KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF
SKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAPLVEKEQQLGEEQKA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037974
(233 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152237 - symbol:AT5G38830 "AT5G38830" species... 447 3.2e-42 1
UNIPROTKB|Q0IZQ2 - symbol:Os09g0556500 "Os09g0556500 prot... 349 2.2e-31 1
TAIR|locus:2042521 - symbol:SYCO ARATH "cysteinyl t-RNA s... 328 4.6e-29 1
TAIR|locus:2078406 - symbol:AT3G56300 "AT3G56300" species... 248 1.8e-20 1
UNIPROTKB|Q7G2N5 - symbol:LOC_Os10g32570 "tRNA synthetase... 243 6.3e-20 1
UNIPROTKB|A8JCV0 - symbol:CHLREDRAFT_153062 "Cysteinyl-tR... 153 8.3e-11 2
UNIPROTKB|Q747A2 - symbol:cysS "Cysteine--tRNA ligase" sp... 135 1.4e-06 1
TIGR_CMR|GSU_3365 - symbol:GSU_3365 "cysteinyl-tRNA synth... 135 1.4e-06 1
UNIPROTKB|O67163 - symbol:cysS "Cysteine--tRNA ligase" sp... 135 1.4e-06 1
UNIPROTKB|Q8A2F4 - symbol:cysS "Cysteine--tRNA ligase" sp... 130 5.6e-06 1
TIGR_CMR|CBU_1487 - symbol:CBU_1487 "cysteinyl-tRNA synth... 129 6.7e-06 1
UNIPROTKB|Q8F525 - symbol:cysS "Cysteine--tRNA ligase" sp... 117 0.00018 1
TIGR_CMR|BA_0089 - symbol:BA_0089 "cysteinyl-tRNA synthet... 114 0.00040 1
UNIPROTKB|Q89NP8 - symbol:cysS "Cysteine--tRNA ligase" sp... 112 0.00067 1
>TAIR|locus:2152237 [details] [associations]
symbol:AT5G38830 "AT5G38830" species:3702 "Arabidopsis
thaliana" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0005829 "cytosol" evidence=IDA;IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507
"chloroplast" evidence=IBA] [GO:0046686 "response to cadmium ion"
evidence=IEP] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0046686
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 OMA:HTRAGER EMBL:BT033092 IPI:IPI00528005
RefSeq:NP_198699.1 UniGene:At.30380 ProteinModelPortal:B3LFA4
SMR:B3LFA4 STRING:B3LFA4 PaxDb:B3LFA4 PRIDE:B3LFA4
EnsemblPlants:AT5G38830.1 GeneID:833874 KEGG:ath:AT5G38830
TAIR:At5g38830 PhylomeDB:B3LFA4 ProtClustDB:CLSN2916730
Genevestigator:B3LFA4 Uniprot:B3LFA4
Length = 511
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 97/183 (53%), Positives = 125/183 (68%)
Query: 41 TLQDCEVALSPFQ----EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
TLQD + LSP+Q ED T +D IKKL+ EF ++M DDLNT+HILTGA+ D
Sbjct: 327 TLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQD 386
Query: 97 ALKFINNSXXXXXXXX----LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDK 152
ALKFIN S +S++ SL++IE + VLDVLGLL S Y+E+L+++K K
Sbjct: 387 ALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAAREVLDVLGLLTTLS-YAEILKEMKLK 445
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L RAE+ E + LIEER TA+KNKDF+KSD+IR LTRKGIALMD+ KET+WRPC P
Sbjct: 446 TLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKETVWRPCFPS 505
Query: 213 EQE 215
+ +
Sbjct: 506 QAD 508
>UNIPROTKB|Q0IZQ2 [details] [associations]
symbol:Os09g0556500 "Os09g0556500 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0043067 GO:GO:0042407 EMBL:AP008215 EMBL:CM000146
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0010197 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 RefSeq:NP_001063899.1
UniGene:Os.11564 STRING:Q0IZQ2 EnsemblPlants:LOC_Os09g38420.1
GeneID:4347821 KEGG:osa:4347821 OMA:ATHHTNE ProtClustDB:PLN02946
Uniprot:Q0IZQ2
Length = 569
Score = 349 (127.9 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 80/177 (45%), Positives = 110/177 (62%)
Query: 41 TLQDCEVALSPFQEDARSGSITPA-AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TLQDCE + Q +++G P +CI+KL DEF T MSDDL+TS + A + LK
Sbjct: 392 TLQDCEESCQ--QHQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLK 448
Query: 100 FINNSXXXXXXXXLSL-IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
+N+ +ESL +E ++++VL VLGLLP S+Y E LQQL++KAL+RA
Sbjct: 449 VMNDLLHTRKGKKQEKRLESLSAMEEKIRMVLSVLGLLP--SSYYEALQQLREKALRRAS 506
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
+ E VL IEER +A+K K + KSD+IR +L GIALMD T WRP VP+ ++
Sbjct: 507 MTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 563
>TAIR|locus:2042521 [details] [associations]
symbol:SYCO ARATH "cysteinyl t-RNA synthetase"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0010197 "polar
nucleus fusion" evidence=IMP] [GO:0042407 "cristae formation"
evidence=IMP] [GO:0043067 "regulation of programmed cell death"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 SMART:SM00840 Pfam:PF01406 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0009570 EMBL:CP002685 GO:GO:0043067
GO:GO:0042407 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0010197
SUPFAM:SSF47323 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
OMA:NHICNIC IPI:IPI00539163 RefSeq:NP_565717.2 UniGene:At.21710
ProteinModelPortal:F4IPY2 SMR:F4IPY2 PRIDE:F4IPY2
EnsemblPlants:AT2G31170.1 GeneID:817673 KEGG:ath:AT2G31170
Uniprot:F4IPY2
Length = 563
Score = 328 (120.5 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 76/177 (42%), Positives = 103/177 (58%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE AL +GS+ I R EF MSDDL T + A + LK
Sbjct: 384 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP-VTLAAMSEPLKT 442
Query: 101 INNSXXXXXXXXLSLIESLLK-IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
IN+ + E LK +E ++ VL +LGL+P ++YSEVL+QLK+KALKRA L
Sbjct: 443 INDLIHTRKGKKQARREESLKALETTIRDVLTILGLMP--TSYSEVLEQLKEKALKRAGL 500
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
E DVL ++ER A+KNK++ +SD IR DL + GIALMD + T WRP +P+ ++
Sbjct: 501 KEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQE 557
>TAIR|locus:2078406 [details] [associations]
symbol:AT3G56300 "AT3G56300" species:3702 "Arabidopsis
thaliana" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507
"chloroplast" evidence=IBA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AL163763 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 KO:K01883
TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 IPI:IPI00546523 PIR:T47747
RefSeq:NP_191189.1 UniGene:At.34947 ProteinModelPortal:Q9LYL3
SMR:Q9LYL3 STRING:Q9LYL3 PRIDE:Q9LYL3 EnsemblPlants:AT3G56300.1
GeneID:824797 KEGG:ath:AT3G56300 TAIR:At3g56300 InParanoid:Q9LYL3
OMA:GGEDHIA PhylomeDB:Q9LYL3 ProtClustDB:CLSN2913449
Genevestigator:Q9LYL3 Uniprot:Q9LYL3
Length = 489
Score = 248 (92.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 59/121 (48%), Positives = 78/121 (64%)
Query: 96 DALKFINNSXXXXXXXX----LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKD 151
+ALKFIN S +SL+ SL+++E V+ VLDVLGLL S Y E+L+ +K
Sbjct: 340 NALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVREVLDVLGLLTTLS-YGELLKDMKQ 398
Query: 152 KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP 211
KAL RA + E +VL IEER A+K+KDF +SD+IR L KGI L DV +T+WRP P
Sbjct: 399 KALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTVWRPSTP 458
Query: 212 V 212
+
Sbjct: 459 L 459
>UNIPROTKB|Q7G2N5 [details] [associations]
symbol:LOC_Os10g32570 "tRNA synthetase class I family
protein, putative, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0004817 "cysteine-tRNA ligase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
EMBL:DP000086 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
UniGene:Os.78553 ProteinModelPortal:Q7G2N5 STRING:Q7G2N5
Gramene:Q7G2N5 Uniprot:Q7G2N5
Length = 491
Score = 243 (90.6 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 65/178 (36%), Positives = 97/178 (54%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTS----HILT-GAFL 95
TL D E +S + E SI + I++ R F +MSDDL+T+ H++ L
Sbjct: 312 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKL 371
Query: 96 DALKFINNSXXXXXXXXL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
+ K + I++L+ ++NEV L +LGL+P S + +QLKDKA
Sbjct: 372 EHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP----MSSLAEQLKDKA 427
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP 211
LKRA + + +IE+R A+KNKDF++SD+IR +L+ GIALM T+WRP P
Sbjct: 428 LKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLWRPSEP 485
>UNIPROTKB|A8JCV0 [details] [associations]
symbol:CHLREDRAFT_153062 "Cysteinyl-tRNA synthetase"
species:3055 "Chlamydomonas reinhardtii" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0043067 GO:GO:0042407 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0010197 SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 EMBL:DS496158 RefSeq:XP_001700207.1
ProteinModelPortal:A8JCV0 STRING:A8JCV0 ProMEX:A8JCV0
EnsemblPlants:EDO98322 GeneID:5725796 KEGG:cre:CHLREDRAFT_153062
ProtClustDB:CLSN2923397 BioCyc:CHLAMY:CHLREDRAFT_153062-MONOMER
Uniprot:A8JCV0
Length = 637
Score = 153 (58.9 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL + ++LQ+L+ AL R ++ E V I+ER A+ KDF++SD IR DL K
Sbjct: 557 GLAASAAALEQLLQELRALALVRLDMTEEAVQAAIQERTEARAAKDFARSDAIRVDLAAK 616
Query: 194 GIALMDVRKETIWRP 208
G+ L+D + T WRP
Sbjct: 617 GVLLLDTPEGTSWRP 631
Score = 54 (24.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 37 NETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
+E Q+ A + + G+ AA L E + ++DDLNT + GA
Sbjct: 433 SEAAAQQEAAAAAPSGKGKGKGGAAAAAAPAAGPALLSEVLSALADDLNTPAAV-GALSA 491
Query: 97 ALKFINN 103
L+ IN+
Sbjct: 492 PLRTIND 498
>UNIPROTKB|Q747A2 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:NP_954405.1
ProteinModelPortal:Q747A2 GeneID:2688225 KEGG:gsu:GSU3365
PATRIC:22029585 BioCyc:GSUL243231:GH27-3315-MONOMER Uniprot:Q747A2
Length = 481
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/137 (33%), Positives = 64/137 (46%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSXXXXXXXXLSLIESLLKIENEVKVVLD 131
L F M DD NT+ L G D ++ +N L + I+ V
Sbjct: 351 LPTRFREAMDDDFNTAQAL-GYVFDLVRAVNRVLAEGEIDRAVLASAREAIDR----VGA 405
Query: 132 VLGLLP-EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VLGL E + E L+ K AL E AE + LIEER A+K +DF ++D+IR L
Sbjct: 406 VLGLFTSEPGAFVERLKSRKAAALP-IEAAE--IERLIEERNAARKARDFRRADEIRDTL 462
Query: 191 TRKGIALMDVRKETIWR 207
+GI L+D + T W+
Sbjct: 463 AAQGILLLDSAQGTTWK 479
>TIGR_CMR|GSU_3365 [details] [associations]
symbol:GSU_3365 "cysteinyl-tRNA synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:NP_954405.1
ProteinModelPortal:Q747A2 GeneID:2688225 KEGG:gsu:GSU3365
PATRIC:22029585 BioCyc:GSUL243231:GH27-3315-MONOMER Uniprot:Q747A2
Length = 481
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/137 (33%), Positives = 64/137 (46%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSXXXXXXXXLSLIESLLKIENEVKVVLD 131
L F M DD NT+ L G D ++ +N L + I+ V
Sbjct: 351 LPTRFREAMDDDFNTAQAL-GYVFDLVRAVNRVLAEGEIDRAVLASAREAIDR----VGA 405
Query: 132 VLGLLP-EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VLGL E + E L+ K AL E AE + LIEER A+K +DF ++D+IR L
Sbjct: 406 VLGLFTSEPGAFVERLKSRKAAALP-IEAAE--IERLIEERNAARKARDFRRADEIRDTL 462
Query: 191 TRKGIALMDVRKETIWR 207
+GI L+D + T W+
Sbjct: 463 AAQGILLLDSAQGTTWK 479
>UNIPROTKB|O67163 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:224324 "Aquifex
aeolicus VF5" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
ProtClustDB:PRK00260 PIR:H70391 RefSeq:NP_213726.1
ProteinModelPortal:O67163 GeneID:1193797 KEGG:aae:aq_1068
PATRIC:20959420 BioCyc:AAEO224324:GJBH-761-MONOMER Uniprot:O67163
Length = 495
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/198 (26%), Positives = 91/198 (45%)
Query: 19 LDIFWLNELFASIPQYTGNETITLQDCEVALSPFQE-DARSGSITPAAEDCIKKLRDEFY 77
LD W ++ ++ Y + ++D E+ L Q +++ G P E +K+ + FY
Sbjct: 302 LDFSW-EKMEETLKAYERLKN-AIEDLEL-LKKLQVVESKEGGTHPLYEQ-VKEFEENFY 357
Query: 78 TRMSDDLNTSHILTGAF--LDALKFINN---SXXXXXXXXLSLIESLLK-IENEVKVVLD 131
+SDD NT L+ + + L + N S LS E K + N +K
Sbjct: 358 ASLSDDFNTPEALSHVYKLVGELNKVKNKAYSEGKITDRELSAYEFASKSLLNTMK---K 414
Query: 132 VLGLLPEGSTYSEV-LQQLKDKALKRAELAENDVLH-LIEERATAKKNKDFSKSDQIRAD 189
+ GLL + Y E ++++ ++ L+ ++ + ++ LIE R A+K K F +D IR
Sbjct: 415 IFGLLED--LYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFKVADYIRDK 472
Query: 190 LTRKGIALMDVRKETIWR 207
L GI L D T W+
Sbjct: 473 LKELGIVLEDTPAGTKWK 490
>UNIPROTKB|Q8A2F4 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:226186
"Bacteroides thetaiotaomicron VPI-5482" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AE015928
GenomeReviews:AE015928_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 RefSeq:NP_812263.1 ProteinModelPortal:Q8A2F4
GeneID:1075333 KEGG:bth:BT_3351 PATRIC:21061715 OMA:TITARYI
BioCyc:BTHE226186:GJXV-3416-MONOMER Uniprot:Q8A2F4
Length = 493
Score = 130 (50.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 56/196 (28%), Positives = 85/196 (43%)
Query: 17 LLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARS-GSITPAAEDC----IKK 71
+ + F L + S ++ NE LQ E L E ITPAA +K+
Sbjct: 312 MTIRFFILQAHYRSTVDFS-NEA--LQASEKGLQRLIEAIEGLDKITPAATTSEGINVKE 368
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSXXXXXXXXLSLIESLLKIENEVKVVLD 131
LR + Y M+DDLNT ++ F + + INN ++ L E D
Sbjct: 369 LRAKCYEAMNDDLNTPIVIAQLF-EGARIINNINAGNATISAEDLKDLK--ETFHLFCFD 425
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
++GL E + S+ + K + D+L +E+R AK NKD++ SD+IR LT
Sbjct: 426 IMGLKEEKGS-SDGREAAYGKVV--------DML--LEQRMKAKANKDWATSDEIRNTLT 474
Query: 192 RKGIALMDVRKETIWR 207
G + D + WR
Sbjct: 475 ALGFEVKDTKDGFEWR 490
>TIGR_CMR|CBU_1487 [details] [associations]
symbol:CBU_1487 "cysteinyl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 RefSeq:NP_820470.2 PDB:3TQO PDBsum:3TQO
ProteinModelPortal:Q83BL7 PRIDE:Q83BL7 GeneID:1209397
KEGG:cbu:CBU_1487 PATRIC:17931737 OMA:MENGKAY
BioCyc:CBUR227377:GJ7S-1475-MONOMER EvolutionaryTrace:Q83BL7
Uniprot:Q83BL7
Length = 460
Score = 129 (50.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSXXXXXXXXLSLIESLLKIENEVKVVLDVL 133
D FY M DD NT I + ++ IN + IE + E+K + ++
Sbjct: 340 DRFYEAMDDDFNTP-IAFALLFEMVREINRFRDN------NQIEKAAVLAAELKCLGNIF 392
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GLL YS +Q A K A++ E + LI++R A+ KD+ +DQIR LT
Sbjct: 393 GLLQ----YSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDL 444
Query: 194 GIALMDVRKETIWR 207
G+A+ D T WR
Sbjct: 445 GVAIEDSSDGTSWR 458
>UNIPROTKB|Q8F525 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 EMBL:AE010300 GenomeReviews:AE010300_GR
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 OMA:NHICNIC RefSeq:NP_712044.1
ProteinModelPortal:Q8F525 PaxDb:Q8F525 GeneID:1151206
KEGG:lil:LA_1863 PATRIC:22384560
BioCyc:LINT189518:GJBB-1494-MONOMER Uniprot:Q8F525
Length = 471
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 31/93 (33%), Positives = 55/93 (59%)
Query: 116 IESLLKI-ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
I SLL +++ K ++ + +L + + +L L ++ K +L ++++ LIEER A
Sbjct: 382 INSLLDTNQSDSKQRIEYIQIL---AYFDRILGVLNFESKK--DLLDSEIDSLIEERQIA 436
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+KNKDF++SD IR L +GI + D ++ WR
Sbjct: 437 RKNKDFARSDAIRDQLLAQGILIEDTKEGIRWR 469
>TIGR_CMR|BA_0089 [details] [associations]
symbol:BA_0089 "cysteinyl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 OMA:DFDALNM ProtClustDB:PRK00260
RefSeq:NP_842657.1 RefSeq:YP_016693.1 RefSeq:YP_026375.1
ProteinModelPortal:Q81VV1 DNASU:1085927
EnsemblBacteria:EBBACT00000008203 EnsemblBacteria:EBBACT00000016398
EnsemblBacteria:EBBACT00000022610 GeneID:1085927 GeneID:2814899
GeneID:2849752 KEGG:ban:BA_0089 KEGG:bar:GBAA_0089 KEGG:bat:BAS0089
BioCyc:BANT260799:GJAJ-100-MONOMER
BioCyc:BANT261594:GJ7F-102-MONOMER Uniprot:Q81VV1
Length = 465
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 144 EVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKE 203
E L + L + EL + ++ LI++R A+KN+DF+ SDQIR DL + I L D +
Sbjct: 400 ETLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQG 459
Query: 204 TIWR 207
T W+
Sbjct: 460 TRWK 463
>UNIPROTKB|Q89NP8 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:BA000040
GenomeReviews:BA000040_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
ProtClustDB:PRK00260 RefSeq:NP_770430.1 ProteinModelPortal:Q89NP8
GeneID:1053062 KEGG:bja:blr3790 PATRIC:21191047
BioCyc:BJAP224911:GJEJ-3814-MONOMER Uniprot:Q89NP8
Length = 460
Score = 112 (44.5 bits), Expect = 0.00067, P = 0.00067
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 143 SEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRK 202
SE Q +D+ K + + +V LI ER A+ KDF +SD+IR L G+A+ D ++
Sbjct: 393 SESAAQWEDRKQKASGVDAGEVERLISERTAARGRKDFKESDRIRDQLAAMGVAIKDSKE 452
Query: 203 ETIW 206
T W
Sbjct: 453 GTTW 456
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 233 225 0.00077 113 3 11 22 0.41 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 591 (63 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.22u 0.12s 22.34t Elapsed: 00:00:01
Total cpu time: 22.22u 0.12s 22.34t Elapsed: 00:00:01
Start: Fri May 10 08:01:48 2013 End: Fri May 10 08:01:49 2013