BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037974
(233 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/235 (58%), Positives = 171/235 (72%), Gaps = 21/235 (8%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQY-TGNETI-----TLQDCEVALSPFQ---------ED 55
P VR L+ + + L ++ Q + ++ I TLQDCE ALS FQ ++
Sbjct: 289 PLAVRHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQN 348
Query: 56 ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-----KKQPKQ 110
++ IT A+ CI KLRDEF T+MSDDL+TSHILTGAF DALKFIN+S KK K
Sbjct: 349 SKVVGITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKP 408
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
QQLSLI+SL +IE E+K+VL++LGLLP G TY+E+LQQLKDKALKRA + E+DVL IEE
Sbjct: 409 QQLSLIQSLTEIEREIKLVLNILGLLPPG-TYAEILQQLKDKALKRAGVTEDDVLRSIEE 467
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAPLVEKEQ 225
RA A+KNK+FS+SDQ+RA+L KGIALMDV KET+WRPCVPVEQEQEA V K+Q
Sbjct: 468 RAQARKNKEFSRSDQVRANLAAKGIALMDVGKETVWRPCVPVEQEQEAVSVVKDQ 522
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 161/224 (71%), Gaps = 13/224 (5%)
Query: 8 ILFPAFVRTLLLDIFWLNELFASIPQY-TGNETI-----TLQDCEVALSPFQE-DARSGS 60
+ P +R LL + + + SI Q +E + TL+DCE LSPFQE + ++
Sbjct: 287 LYHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVC 346
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-----KKQPKQQQLSL 115
ITPAA+DCI KL+ +F T+MSDDL+T HIL + +AL+FIN+ KKQ KQQQLS
Sbjct: 347 ITPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSA 406
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
++SL ++E EVK VL VLGLL + YSEVLQQLK KAL+RA + E+DVLHLIEERA A+
Sbjct: 407 VQSLTELEKEVKGVLSVLGLLSTLA-YSEVLQQLKGKALRRAGMIEDDVLHLIEERALAR 465
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAP 219
KNK+FS+ DQIRADL KGIALMDV KETIWRPCVPVEQE +AP
Sbjct: 466 KNKNFSRGDQIRADLASKGIALMDVGKETIWRPCVPVEQEPQAP 509
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/224 (58%), Positives = 157/224 (70%), Gaps = 13/224 (5%)
Query: 8 ILFPAFVRTLLLDIFWLNELFASIPQY-TGNETI-----TLQDCEVALSPFQE-DARSGS 60
+ P +R LL + + + SI Q +E + TL+DCE LS FQE + R+
Sbjct: 287 LYHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVC 346
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-----KKQPKQQQLSL 115
I PAA+DCI+ L+ +F T+MSDDL+T HIL + +AL+FIN+ KKQ KQQQLS
Sbjct: 347 IAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSA 406
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+ESL K+ EVK VL VLGLL YSEVLQQLK KALKRA + E+DVLHLIEERA A+
Sbjct: 407 VESLTKLGKEVKGVLSVLGLLST-LAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALAR 465
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAP 219
KNKDFSK DQIRADL KGIALMDV KETIWRPCVPV+QE +AP
Sbjct: 466 KNKDFSKGDQIRADLASKGIALMDVGKETIWRPCVPVQQEPQAP 509
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 168/241 (69%), Gaps = 21/241 (8%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQY-TGNETI-----TLQDCEVALSPFQED------ARS 58
P +R L+ + + L ++ Q + ++T+ T+QDCE ALS Q + ++
Sbjct: 289 PLVLRHFLISAHYRSPLNYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKT 348
Query: 59 GS---ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-----KKQPKQ 110
G ++ AAE+CI LR EF TRM+DDLNT+HILTGAF +ALKFIN++ KKQPK+
Sbjct: 349 GKKDPVSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKKKQPKK 408
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
QQLS+I+SL+ ++ E++ VLDVLGLL STYSEVLQQLKDKALKRA + E+D+LHLIEE
Sbjct: 409 QQLSMIQSLVNVKKELREVLDVLGLLST-STYSEVLQQLKDKALKRAGMVEDDILHLIEE 467
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAPLVEKEQQLGEE 230
R A+K+K+F KSD IRA L+ GIALMDV +ETIWRPCVPVE P E++ E+
Sbjct: 468 RTQARKDKNFGKSDNIRAKLSSLGIALMDVGRETIWRPCVPVEPAVLVPPGEQKATQAEQ 527
Query: 231 Q 231
+
Sbjct: 528 K 528
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 153/239 (64%), Gaps = 25/239 (10%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETI------TLQDCEVALSPF-----QEDARSG 59
P +R L+ + + L SI Q + TLQDC+ A+SP +++ +
Sbjct: 291 PLALRHFLISAHYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVP 350
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK-----QQQLS 114
I AA++CIKKL EF T+MSDDL T ILTGA +ALKF+N S K K + QL
Sbjct: 351 QINEAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQ 410
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
LI+SLL++E EV VLDVLGLL S Y+EVL QLKDKAL RA L E++VLHLIEER A
Sbjct: 411 LIQSLLEVEKEVGKVLDVLGLLSSKS-YAEVLHQLKDKALNRAGLTEDEVLHLIEERTQA 469
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP--------VEQEQEAPLVEKEQ 225
+ NKDF+KSD++RADL KGIALMDV E IWRPC+P V ++Q AP VE++Q
Sbjct: 470 RINKDFAKSDKMRADLATKGIALMDVGNEIIWRPCIPSEPLVAEVVHRDQRAPTVEEKQ 528
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 156/234 (66%), Gaps = 21/234 (8%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETI------TLQDCEVALSPFQE---------D 55
P +R L+ + + L S+ Q + TLQDCE AL PFQE +
Sbjct: 290 PLALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQN 349
Query: 56 ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-----KKQPKQ 110
A +IT A+ CI +L ++F T+MSDDLNTS +LTGAF +ALK +N S KKQ K+
Sbjct: 350 ANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKK 409
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
QQLSLI S+ +++ EV VL +LGL P T +EVLQQLK KALKRA L E+DV+ LIE+
Sbjct: 410 QQLSLIRSVTEVKKEVTEVLRILGLFPP-CTCAEVLQQLKGKALKRAGLTEDDVMSLIED 468
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQEAPLVEKE 224
RA A+K++DF KSDQIR DL+ +GIALMDV KET+WRPCVPVE E++A V +E
Sbjct: 469 RAVARKSQDFKKSDQIRTDLSARGIALMDVGKETVWRPCVPVENEEKAKTVVEE 522
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 153/239 (64%), Gaps = 21/239 (8%)
Query: 14 VRTLLLDIFWLNELFASIPQYTGNETI------TLQDCEVALSPF-----QEDARSGSIT 62
+R L+ + + L SI Q + TLQDC+ A+SP +++ + I
Sbjct: 294 LRHFLISAHYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQIN 353
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK-----QQQLSLIE 117
AA++CIKKL EF T+MSDDL T ILTGA +ALKF+N S K K + QL LI+
Sbjct: 354 EAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQ 413
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
SLL++E V VLDVLGLL S Y+EVLQQLKDKALKRA L E++VLHLI+ER A+ N
Sbjct: 414 SLLEVEKVVGKVLDVLGLLSSKS-YAEVLQQLKDKALKRAGLTEDEVLHLIDERTQARIN 472
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP----VEQEQEAPLVEKEQQLGEEQK 232
KDF+KSD++RADL KGIALMDV E WRPC+P V + + P+VE++Q QK
Sbjct: 473 KDFAKSDKMRADLATKGIALMDVGNEITWRPCIPSEPLVAEVVQRPIVEEKQSTPVNQK 531
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 150/238 (63%), Gaps = 25/238 (10%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQY-TGNETI-----TLQDCEVALSPF-QEDARSGSITP 63
P +R L+ + + L SI Q T ++ I TL+DC LS F QED P
Sbjct: 299 PLALRHFLISAHYRSPLNYSITQLETSSDAIYYIFQTLEDCRDTLSSFLQEDTEKKEKVP 358
Query: 64 ----AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK-----QQQLS 114
AA++CIKKL+DEF T+MSDDL T ILTGA +ALKF+N S K K + QL
Sbjct: 359 PINDAAKECIKKLKDEFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKMQKRAQLQ 418
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
L++SLL++E E + +L VLGLL S Y+EVLQQLKDKALKRA L E +VL IEER A
Sbjct: 419 LVQSLLEVEKEAREILKVLGLLSSLS-YAEVLQQLKDKALKRAGLTEVEVLKSIEERRQA 477
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP--------VEQEQEAPLVEKE 224
+ NKDF+KSD +R DLT KGIALMDV ETIWRPC+P V + AP VE++
Sbjct: 478 RINKDFAKSDNVRTDLTAKGIALMDVGNETIWRPCIPSEPLVAQAVSTDNNAPKVEEK 535
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 131/183 (71%), Gaps = 9/183 (4%)
Query: 41 TLQDCEVALSPFQ----EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
TLQD + LSP+Q ED T +D IKKL+ EF ++M DDLNT+HILTGA+ D
Sbjct: 327 TLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQD 386
Query: 97 ALKFINNS----KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDK 152
ALKFIN S KK K+Q++S++ SL++IE + VLDVLGLL S Y+E+L+++K K
Sbjct: 387 ALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAAREVLDVLGLLTTLS-YAEILKEMKLK 445
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L RAE+ E + LIEER TA+KNKDF+KSD+IR LTRKGIALMD+ KET+WRPC P
Sbjct: 446 TLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKETVWRPCFPS 505
Query: 213 EQE 215
+ +
Sbjct: 506 QAD 508
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 9/179 (5%)
Query: 41 TLQDCEVALSPFQE----DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
TLQD + LSP++E D TP +D IKKL+ EF ++M DDLNT+HILTGA+ D
Sbjct: 327 TLQDLDEDLSPYREALSEDGGKAEQTPEGKDIIKKLKSEFESKMLDDLNTAHILTGAYQD 386
Query: 97 ALKFINNS----KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDK 152
ALKFIN + KK K+Q++S++ SL++IE + VLDVLGLL S Y+EVL+++K K
Sbjct: 387 ALKFINANRSKLKKMQKKQRMSMLVSLVEIEKAAREVLDVLGLLTTLS-YAEVLKEMKLK 445
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP 211
L RAE+ E D+L IE+R TA+ NKDF+KSD+IR LTRKGIALMD KET+WRPC P
Sbjct: 446 TLIRAEMGEEDILREIEDRITARNNKDFAKSDEIREKLTRKGIALMDFGKETVWRPCFP 504
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 9/212 (4%)
Query: 12 AFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQ----EDARSGSITPAAED 67
A L L F ++ + S +T ++ + + LSP+Q ED T +D
Sbjct: 287 ASYHPLALRHFLMSAQYRSPLSFTASQLESSSEALYCLSPYQDALSEDGGKSEQTAEGKD 346
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS----KKQPKQQQLSLIESLLKIE 123
IKKL+ EF ++M DDLNT+HILTGA+ DALKFIN S KK K+Q++S++ SL++IE
Sbjct: 347 IIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIE 406
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
+ VLDVLGLL S Y+E+L+++K K L RAE+ E + LIEER TA+KNKDF+KS
Sbjct: 407 KAAREVLDVLGLLTTLS-YAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKS 465
Query: 184 DQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
D+IR LTRKGIALMD+ KET+WRPC P + +
Sbjct: 466 DEIREKLTRKGIALMDIGKETVWRPCFPSQAD 497
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 121/178 (67%), Gaps = 10/178 (5%)
Query: 35 TGNETITLQDCEVALSPF-QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGA 93
T + TL+DC ALS F QED+ AAE CI KL++EF T M+DDL T IL GA
Sbjct: 367 TSSSLKTLEDCRDALSSFLQEDSEKKDQINAAEKCINKLKEEFQTEMNDDLQTHVILKGA 426
Query: 94 FLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
L+ALKF+N S L +SLLK+E EV+ VL VLGLL S Y+EVLQQLKDKA
Sbjct: 427 LLEALKFMNRS--------LQFKQSLLKVEQEVREVLKVLGLLSSLS-YAEVLQQLKDKA 477
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP 211
LKRA L E +VL LIEER A+ NKDF+KSD IR DLT KGIAL DV E IWRPC+P
Sbjct: 478 LKRAGLTEKEVLKLIEERKQARINKDFAKSDNIRTDLTAKGIALEDVDNEMIWRPCIP 535
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL +CE L+ + R SI P D I K D F T MSDDL+T +L G D LK
Sbjct: 386 TLHECESFLNQHDQTIRKDSIPPDTLDIIDKFHDVFLTSMSDDLHTPVVLAG-MSDPLKS 444
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+QQ IESL +E V+ VL VLGL+P ++Y EVLQQLK+KALKRA
Sbjct: 445 INDLLHTRKGKKQQFR-IESLSALEKSVRDVLTVLGLMP--ASYFEVLQQLKEKALKRAN 501
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L E+DVL IEERA A+ K+++KSD IR DL GI LMD T WRP +P+
Sbjct: 502 LTEDDVLQKIEERAAARIQKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPAIPL 555
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 124/186 (66%), Gaps = 10/186 (5%)
Query: 41 TLQDCEVALSPFQED----ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
TL DC AL PFQE+ A++ S P +L RMSDDL+ + IL G+ +
Sbjct: 228 TLLDCSDALKPFQENVNENAKASSKKPV-NLLTLRLLMILRKRMSDDLHIADILKGSLQE 286
Query: 97 ALKFINN----SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDK 152
ALK INN KK+ KQQ+L ++SL ++E E++ VL+VLGLL + YSEVL QLK+K
Sbjct: 287 ALKSINNELNGLKKKQKQQKLLAVQSLTELEAEIRYVLEVLGLLSP-APYSEVLHQLKEK 345
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
AL RAE+ E+DV LIEERA A+KNK+F KSD+IR LT KGI+LMD+ T WRPCVP
Sbjct: 346 ALLRAEMTEDDVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCVPE 405
Query: 213 EQEQEA 218
++Q +
Sbjct: 406 VEDQAS 411
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 108/174 (62%), Gaps = 8/174 (4%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL +CE L+ Q D R S P D I K D F T MSDDL+T +L G D LK
Sbjct: 384 TLHECESFLN--QHDQRKDSTPPDTLDIIDKFHDVFLTSMSDDLHTPVVLAG-MSDPLKS 440
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+QQ IESL +E V+ VL VLGL+P ++YSEVLQQLK KALKRA
Sbjct: 441 INDLLHARKGKKQQFR-IESLSALEKSVRDVLTVLGLMP--ASYSEVLQQLKVKALKRAN 497
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
E +VL IEERATA+ K+++KSD IR DL GI LMD T WRP +P+
Sbjct: 498 FTEEEVLQKIEERATARMQKEYAKSDAIRKDLAVLGITLMDSPNGTTWRPAIPL 551
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 108/179 (60%), Gaps = 9/179 (5%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE +S + S+ D I K D F T MSDDL+T +L A D LK
Sbjct: 390 TLHDCETVISQHETAFEKDSVPSDTLDGINKFSDVFVTSMSDDLHTP-VLLAALSDPLKI 448
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN+ K+ I+SL +E V+ L VLGL+P +TYSEVLQQL++KAL+RA+L
Sbjct: 449 INDMLHTRKR-----IQSLAALEKIVRDALSVLGLMP--TTYSEVLQQLREKALRRAKLT 501
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQEA 218
E VL IEER A+KN+D+ +SD IR DL GIALMD T WRP +P+ QEQ+A
Sbjct: 502 EEQVLQRIEERTVARKNRDYERSDAIRKDLATHGIALMDSPDGTSWRPAIPLAMQEQQA 560
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 123/186 (66%), Gaps = 10/186 (5%)
Query: 41 TLQDCEVALSPFQED----ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
TL DC AL PFQE+ A++ S P +L RMSDDL+ + IL G+ +
Sbjct: 228 TLLDCSDALKPFQENVNENAKASSKKPV-NLLTLRLLMILRKRMSDDLHIADILKGSLQE 286
Query: 97 ALKFIN----NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDK 152
ALK IN KK+ KQQ+L ++SL ++E E++ VL+VLGLL + YSEVL QLK+K
Sbjct: 287 ALKSINIELNGLKKKQKQQKLLAVQSLTELEAEIRYVLEVLGLLSP-APYSEVLDQLKEK 345
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
AL RAE+ E+DV LIEERA A+KNK+F KSD+IR LT KGI+LMD+ T WRPCVP
Sbjct: 346 ALLRAEMTEDDVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCVPE 405
Query: 213 EQEQEA 218
++Q +
Sbjct: 406 VEDQAS 411
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 23/221 (10%)
Query: 8 ILFPAFVRTLLLDIFWLNELFASIPQ---------YTGNETITLQDCEVALSPFQEDARS 58
+ P +R LL + + + +I Q YT TLQDCE + Q +++
Sbjct: 183 LYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQ---TLQDCEESCQ--QHQSKA 237
Query: 59 GSITPA-AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLS 114
G P +CI+KL DEF T MSDDL+TS + A + LK +N +++K KQ++
Sbjct: 238 GDPLPVNTTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR- 295
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
+ESL +E ++++VL VLGLLP S+Y E LQQL++KAL+RA + E VL IEER +A
Sbjct: 296 -LESLSAMEEKIRMVLSVLGLLP--SSYYEALQQLREKALRRASMTEEQVLQKIEERTSA 352
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
+K K + KSD+IR +L GIALMD T WRP VP+ ++
Sbjct: 353 RKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 393
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 23/221 (10%)
Query: 8 ILFPAFVRTLLLDIFWLNELFASIPQ---------YTGNETITLQDCEVALSPFQEDARS 58
+ P +R LL + + + +I Q YT TLQDCE + Q +++
Sbjct: 353 LYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQ---TLQDCEESCQ--QHQSKA 407
Query: 59 GSITPA-AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLS 114
G P +CI+KL DEF T MSDDL+TS + A + LK +N +++K KQ++
Sbjct: 408 GDPLPVNTTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR- 465
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
+ESL +E ++++VL VLGLLP S+Y E LQQL++KAL+RA + E VL IEER +A
Sbjct: 466 -LESLSAMEEKIRMVLSVLGLLP--SSYYEALQQLREKALRRASMTEEQVLQKIEERTSA 522
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
+K K + KSD+IR +L GIALMD T WRP VP+ ++
Sbjct: 523 RKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 563
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 23/221 (10%)
Query: 8 ILFPAFVRTLLLDIFWLNELFASIPQ---------YTGNETITLQDCEVALSPFQEDARS 58
+ P +R LL + + + +I Q YT TLQDCE + Q +++
Sbjct: 353 LYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQ---TLQDCEESCQ--QHQSKA 407
Query: 59 GSITPA-AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLS 114
G P +CI+KL DEF T MSDDL+TS + A + LK +N +++K KQ++
Sbjct: 408 GDPLPVNTTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR- 465
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
+ESL +E ++++VL VLGLLP S+Y E LQQL++KAL+RA + E VL IEER +A
Sbjct: 466 -LESLSAMEEKIRMVLSVLGLLP--SSYYEALQQLREKALRRASMTEEQVLQKIEERTSA 522
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
+K K + KSD+IR +L GIALMD T WRP VP+ ++
Sbjct: 523 RKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 563
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 10/182 (5%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL DC+ A+ Q+D + S+ P DCI K ++F T MSDDL+T +L A D LK
Sbjct: 394 TLHDCQNAMD--QDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLK 450
Query: 100 FINN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN+ ++ K+Q+L L ESL +E ++ VL +LGL+P ++YSE L QL++KALKR+
Sbjct: 451 TINDLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLMP--ASYSEALLQLREKALKRS 507
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQ 216
+L E+ +L IEER A+KNK++ KSD IR DL GIALMD T WRP +P+ QEQ
Sbjct: 508 KLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQ 567
Query: 217 EA 218
A
Sbjct: 568 VA 569
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 10/182 (5%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL DC+ A+ Q+D + S+ P DCI K ++F T MSDDL+T +L A D LK
Sbjct: 297 TLHDCQNAMD--QDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLK 353
Query: 100 FINN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN+ ++ K+Q+L L ESL +E ++ VL +LGL+P ++YSE L QL++KALKR+
Sbjct: 354 TINDLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLMP--ASYSEALLQLREKALKRS 410
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQ 216
+L E+ +L IEER A+KNK++ KSD IR DL GIALMD T WRP +P+ QEQ
Sbjct: 411 KLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQ 470
Query: 217 EA 218
A
Sbjct: 471 VA 472
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 112/181 (61%), Gaps = 7/181 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DC +S E + GSI P+ + I K + F T MSDD++T +L A D LK
Sbjct: 397 TLDDCRTVVSQEDESSFKGSIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-AALSDPLKI 455
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+Q+ + ESL +E + VL +LGL+P ++YSE LQQLK+KAL RA+
Sbjct: 456 INDLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLMP--ASYSEALQQLKEKALTRAK 512
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQE 217
+ + VL IEER A+KNK++ KSD IR DL GI+LMD T WRP VP+ QE +
Sbjct: 513 MTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQ 572
Query: 218 A 218
A
Sbjct: 573 A 573
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 7/181 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DC +S E + G I P+ + I K + F T MSDD++T +L A D LK
Sbjct: 397 TLDDCRTVISQEDESSFKGPIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-AALSDPLKI 455
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+Q+ + ESL +E + VL +LGL+P ++YSE LQQLK+KAL RA+
Sbjct: 456 INDLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLMP--ASYSEALQQLKEKALTRAK 512
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQE 217
+ + VL IEER A+KNK++ KSD IR DL GI+LMD T WRP VP+ QE +
Sbjct: 513 MTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQ 572
Query: 218 A 218
A
Sbjct: 573 A 573
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 109/179 (60%), Gaps = 5/179 (2%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE LS + +I P + I K D T MSDDL+T +L A D LK
Sbjct: 314 TLHDCENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTP-VLLSALSDPLKI 372
Query: 101 INNSKKQPK-QQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
IN+ K ++Q+ IES+ +E V+ L VLGL+P TY+E LQQL++KAL+RA+L
Sbjct: 373 INDMLHTRKGKKQIKRIESIAALEKMVRNALMVLGLMP--PTYNEALQQLREKALRRAKL 430
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQE 217
E+ +L IEER A+K+KD+ KSD IR DL GIALMD T WRP +P+ QEQ+
Sbjct: 431 TEDQILQKIEERTVARKDKDYEKSDAIRKDLAALGIALMDSPDGTSWRPAIPLALQEQQ 489
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 11/179 (6%)
Query: 41 TLQDCEVALSPFQEDARSG-SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL+DCE + Q+ + +G S+ P + I+KL DEF T MSDDL+TS + A + LK
Sbjct: 394 TLRDCEESCQ--QQGSNTGNSLPPNTLNYIQKLHDEFETSMSDDLHTS-VALAAISEPLK 450
Query: 100 FIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+N +++K KQ + +E+L ++ +++VVL VLGLLP S+Y E LQQL+DKAL+R
Sbjct: 451 VMNDLLHTRKGKKQDKR--LEALSALDEKIRVVLSVLGLLP--SSYHEALQQLRDKALRR 506
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
A + E VL IEER A+K K + KSD+IR +L GIALMD T WRP +P+ +E
Sbjct: 507 ASITEELVLQKIEERTAARKAKQYEKSDEIRKELAAVGIALMDGPNGTTWRPSLPLSEE 565
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 11/180 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAE-DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL+DCE + + +G+ PA + I+KL DEF T MSDDL+TS + A + LK
Sbjct: 222 TLRDCEEICQ--HQQSNTGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLK 278
Query: 100 FIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+N +++K KQ + +ESL +E +++VVL VLGLLP S+Y E LQQL+DKAL+R
Sbjct: 279 VMNDLLHTRKGKKQDKR--LESLSALEEKIRVVLSVLGLLP--SSYHEALQQLRDKALRR 334
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
A + E V+ IEER A+K K + KSD+IR +L GIALMD T WRP +P+ +E+
Sbjct: 335 ASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 394
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 11/180 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAE-DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL+DCE + + +G+ PA + I+KL DEF T MSDDL+TS + A + LK
Sbjct: 386 TLRDCEEICQ--HQQSNTGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLK 442
Query: 100 FIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+N +++K KQ + +ESL +E +++VVL VLGLLP S+Y E LQQL+DKAL+R
Sbjct: 443 VMNDLLHTRKGKKQDKR--LESLSALEEKIRVVLSVLGLLP--SSYHEALQQLRDKALRR 498
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
A + E V+ IEER A+K K + KSD+IR +L GIALMD T WRP +P+ +E+
Sbjct: 499 ASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 558
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE AL +GS+ I R EF MSDDL T + A + LK
Sbjct: 222 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP-VTLAAMSEPLKT 280
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN +++K KQ + ESL +E ++ VL +LGL+P ++YSEVL+QLK+KALKRA
Sbjct: 281 INDLIHTRKGKKQARRE--ESLKALETTIRDVLTILGLMP--TSYSEVLEQLKEKALKRA 336
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L E DVL ++ER A+KNK++ +SD IR DL + GIALMD + T WRP +P+
Sbjct: 337 GLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPL 391
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE AL +GS+ I R EF MSDDL T + A + LK
Sbjct: 314 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP-VTLAAMSEPLKT 372
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN +++K KQ + ESL +E ++ VL +LGL+P ++YSEVL+QLK+KALKRA
Sbjct: 373 INDLIHTRKGKKQARRE--ESLKALETTIRDVLTILGLMP--TSYSEVLEQLKEKALKRA 428
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L E DVL ++ER A+KNK++ +SD IR DL + GIALMD + T WRP +P+
Sbjct: 429 GLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPL 483
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE AL +GS+ I R EF MSDDL T + A + LK
Sbjct: 384 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP-VTLAAMSEPLKT 442
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN +++K KQ + ESL +E ++ VL +LGL+P ++YSEVL+QLK+KALKRA
Sbjct: 443 INDLIHTRKGKKQARRE--ESLKALETTIRDVLTILGLMP--TSYSEVLEQLKEKALKRA 498
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L E DVL ++ER A+KNK++ +SD IR DL + GIALMD + T WRP +P+
Sbjct: 499 GLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPL 553
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 115/181 (63%), Gaps = 15/181 (8%)
Query: 41 TLQDCEVALSPFQ---EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDA 97
TL+D E + Q EDA + T CI+KL++EF T MSDDL+TS + A +
Sbjct: 389 TLRDSEESTQKDQINSEDALPATTT----HCIEKLQNEFETSMSDDLHTS-VALAAISEP 443
Query: 98 LKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
LK +N +++K KQ++ +ESL +E +++ VL VLGL+P S+Y E LQQL++KAL
Sbjct: 444 LKVMNDLLHTRKGKKQEKR--LESLFALEEKIRTVLSVLGLMP--SSYYEALQQLREKAL 499
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQ 214
+RA + E+ VL IEER +A+K K + KSD+IR +L GIALMD T WRP VP +
Sbjct: 500 QRASITEDQVLQKIEERTSARKAKQYEKSDEIRKELAALGIALMDGPDGTTWRPSVPFSE 559
Query: 215 E 215
+
Sbjct: 560 Q 560
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 6/179 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TLQD + LS + SI CI L++ F MSDDL+T +L A D LK
Sbjct: 403 TLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMSDDLHTPVVL-AALSDPLKT 461
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+++L +ESL +E +K VL LGL+P S+YSE L QL++KALKR +
Sbjct: 462 INDLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLMP--SSYSEALHQLREKALKRVK 518
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQE 217
+E +V IEER A+KNK++ KSD IR +L GIALMD + T WRP VP +QE
Sbjct: 519 FSETEVQQKIEERDMARKNKEYEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQE 577
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 114/179 (63%), Gaps = 11/179 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAE-DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL DCE Q+ + +G+ PA + I+KL +EF T MSDDL+TS + A + LK
Sbjct: 396 TLLDCEEICQ--QQQSNTGNSLPANTLNYIQKLHEEFETSMSDDLHTS-VALAAISEPLK 452
Query: 100 FIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+N +++K KQ + +ESL +E +++VVL VLGLLP S+Y E LQQL+DKAL+R
Sbjct: 453 VMNDLLHTRKGKKQDKR--LESLSALEEKIRVVLSVLGLLP--SSYHEALQQLRDKALRR 508
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
A + E V+ IEER A+K K + KSD+IR +L GIALMD T WRP +P+ +E
Sbjct: 509 ASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAIGIALMDGPDGTTWRPSLPILEE 567
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 113/182 (62%), Gaps = 11/182 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITP-AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
TL+D E + Q+ + SG P CI+KL ++F T MSDDL+TS + A + LK
Sbjct: 394 TLRDSEESTQ--QDQSSSGDSLPFTTTHCIEKLHEDFETSMSDDLHTS-VALAAVSEPLK 450
Query: 100 FIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+N +++K KQ++ +ESL +E +V++VL VLGL+P S+Y E LQQL+ KAL+R
Sbjct: 451 VMNDLLHTRKGKKQEKR--LESLAALEEKVRMVLSVLGLMP--SSYHEALQQLRGKALRR 506
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
A + E VL IEER A+K K F +SD+IR +L GIALMD T WRP VP ++
Sbjct: 507 ACVTEEQVLQKIEERTAARKAKQFGRSDEIRDELAALGIALMDGPDGTAWRPSVPSSEQP 566
Query: 217 EA 218
A
Sbjct: 567 VA 568
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TLQD + LS + SI CI L++ F MSDDL+T +L A D LK
Sbjct: 403 TLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMSDDLHTPVVL-AALSDPLKT 461
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
IN+ ++ K+++L +ESL +E +K VL LGL+P S+YSE L QL++KALKR +
Sbjct: 462 INDLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLMP--SSYSEALHQLREKALKRVK 518
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQE 217
+E +V IEER A+K K++ KSD IR +L GIALMD + T WRP VP +QE
Sbjct: 519 FSETEVQQKIEERDMARKYKEYEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQE 577
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE L + S+ I EF MSDDL T + A + LK
Sbjct: 384 TLHDCESLLGEKDSTFGNDSVPSDTLTTINTFHSEFVASMSDDLLTP-VTLAAMSEPLKT 442
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
IN +++K KQ + ESL +E ++ VL +LGL+P ++YSEVL+QLK+KALKRA
Sbjct: 443 INDIIHTRKGKKQARRE--ESLKALETTIRDVLTILGLMP--TSYSEVLEQLKEKALKRA 498
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPV 212
L E DVL ++ER A+KNK++ +SD IR DL GIALMD + T WRP +P+
Sbjct: 499 GLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIALMDSPEGTTWRPAIPL 553
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 28/198 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE L+ ++E+ S S+ ++ I K EF MS+DL T+ +L F++ LK
Sbjct: 364 TLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKA 423
Query: 101 INNS---------------------------KKQPKQQQLSLIESLLKIENEVKVVLDVL 133
IN+S ++Q ++Q I++L+ +E E+K L +L
Sbjct: 424 INSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSIL 483
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S+ +EVL+QLKDKALKRA L E + IE+R A+KNK F SD IR +L K
Sbjct: 484 GLMP-SSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATK 542
Query: 194 GIALMDVRKETIWRPCVP 211
GIALMD T+WRPC P
Sbjct: 543 GIALMDEPSGTVWRPCEP 560
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 28/198 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE L+ ++E+ S S+ ++ I K EF MS+DL T+ +L F++ LK
Sbjct: 352 TLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKA 411
Query: 101 INNS---------------------------KKQPKQQQLSLIESLLKIENEVKVVLDVL 133
IN+S ++Q ++Q I++L+ +E E+K L +L
Sbjct: 412 INSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSIL 471
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S+ +EVL+QLKDKALKRA L E + IE+R A+KNK F SD IR +L K
Sbjct: 472 GLMP-SSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATK 530
Query: 194 GIALMDVRKETIWRPCVP 211
GIALMD T+WRPC P
Sbjct: 531 GIALMDEPSGTVWRPCEP 548
>gi|413919531|gb|AFW59463.1| hypothetical protein ZEAMMB73_732444 [Zea mays]
Length = 397
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 28/198 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE L+ ++E+ S S+ ++ I K EF MS+DL T+ +L F++ LK
Sbjct: 193 TLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKA 252
Query: 101 INNS---------------------------KKQPKQQQLSLIESLLKIENEVKVVLDVL 133
IN+S ++Q ++Q I++L+ +E E+K L +L
Sbjct: 253 INSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSIL 312
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S+ +EVL+QLKDKALKRA L E + IE+R A+KNK F SD IR +L K
Sbjct: 313 GLMP-SSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATK 371
Query: 194 GIALMDVRKETIWRPCVP 211
GIALMD T+WRPC P
Sbjct: 372 GIALMDEPSGTVWRPCEP 389
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 110/182 (60%), Gaps = 34/182 (18%)
Query: 41 TLQDCEVALSPFQEDARSGSI-----TPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFL 95
TL+D LSP++E+ SG + T A++ IKK+++
Sbjct: 323 TLEDLVKYLSPYREEM-SGDVGKTQQTAEAKEMIKKVKN--------------------- 360
Query: 96 DALKFINNS----KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKD 151
ALKFIN S KK K+Q++SLI SL+++E V+ VLDVLGLL S Y E L+++K
Sbjct: 361 -ALKFINVSISKLKKIQKKQRMSLIVSLVEVEKAVREVLDVLGLLTTLS-YDEFLKEMKQ 418
Query: 152 KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDV-RKETIWRPCV 210
KAL RA + E +VL I+ER A+KNKDF +SDQIR L KGIAL D+ K+T+WRPC
Sbjct: 419 KALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAAKGIALEDIPGKDTVWRPCT 478
Query: 211 PV 212
P+
Sbjct: 479 PL 480
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 104/198 (52%), Gaps = 29/198 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE LS ++ + S + +D + K EF M+DDL T+ +L G F D LK
Sbjct: 330 TLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKA 388
Query: 101 INNSKKQPKQQQLS---------------------------LIESLLKIENEVKVVLDVL 133
IN++ K+ Q I+++ +E E+K + +L
Sbjct: 389 INSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISIL 448
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S+ +E L+QLKDKALKRA L E + IE+R A+KNK F SDQIR L K
Sbjct: 449 GLMPP-SSLAEALKQLKDKALKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSK 507
Query: 194 GIALMDVRKETIWRPCVP 211
GIALMD T+WRPC P
Sbjct: 508 GIALMDEPTGTVWRPCEP 525
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 29/198 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE LS ++ + S + +D + K EF M+DDL T+ +L G F D LK
Sbjct: 222 TLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKA 280
Query: 101 INNS---------------------------KKQPKQQQLSLIESLLKIENEVKVVLDVL 133
IN++ ++Q ++Q I+++ +E E+K + +L
Sbjct: 281 INSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISIL 340
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S+ +E L+QLKDKALKRA L E + IE+R A+KNK F SDQIR L K
Sbjct: 341 GLMPP-SSLAEALKQLKDKALKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSK 399
Query: 194 GIALMDVRKETIWRPCVP 211
GIALMD T+WRPC P
Sbjct: 400 GIALMDEPTGTVWRPCEP 417
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 33/211 (15%)
Query: 17 LLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSI-----TPAAEDCIKK 71
L L F ++ + S Y+ ++ + D +LSP++E+ SG + + A++ IKK
Sbjct: 279 LALRHFLMSAQYRSPLNYSVSQLESSSDALYSLSPYREEM-SGDVGKTQQSAEAKEMIKK 337
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNS----KKQPKQQQLSLIESLLKIENEVK 127
+++ ALKFIN S KK K+Q++SL+ SL+++E V+
Sbjct: 338 VKN----------------------ALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVR 375
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
VLDVLGLL S Y E+L+ +K KAL RA + E +VL IEER A+K+KDF +SD+IR
Sbjct: 376 EVLDVLGLLTTLS-YGELLKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIR 434
Query: 188 ADLTRKGIALMDVRKETIWRPCVPVEQEQEA 218
L KGI L DV +T+WRP P+ + +
Sbjct: 435 ELLAFKGIFLEDVPGDTVWRPSTPLTKPKSG 465
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL +CE L + R S+ P I D F T MSDDL+T L G D LK
Sbjct: 395 TLHECESFLKQHDQTVRKDSVPPDTLSIIGNFYDVFRTSMSDDLHTPVALAG-MSDPLKL 453
Query: 101 IN---NSKKQ-------------------------------------PKQQQLSLIESLL 120
IN +++K K+QQ IESL
Sbjct: 454 INDLLHTRKWISGRARHHSIKNTIIREKIVVHVILQNMKDSRLRWFGGKKQQFR-IESLA 512
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
++ + VL VLGL+P S+Y EVLQQLK+KAL RA L E+++L IEER A+ K++
Sbjct: 513 ALKKSIGDVLTVLGLMP--SSYYEVLQQLKEKALNRANLTEDEILKKIEERDAARIQKEY 570
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWRPCVPVE-QEQ 216
+KSD IR L GIALMD T WRP +P+ QEQ
Sbjct: 571 AKSDSIRKGLAVLGIALMDSPNGTTWRPTIPLPLQEQ 607
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 112/209 (53%), Gaps = 34/209 (16%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DCE L+ ++E+ S + ++ I K EF MS+DL T+ +L F++ LK
Sbjct: 353 TLYDCEEVLATYREEGTSLPVPSEEQNLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKA 412
Query: 101 INNS---------------------------------KKQPKQQQLSLIESLLKIENEVK 127
IN+S ++Q ++Q I++L+ +E E+K
Sbjct: 413 INSSLNDLKKLQQKIEQQKKKQQQQKKQQQQKQQQQKQQQLQKQPEDYIQALIALETELK 472
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
L +LGL+P S+ +EVL+QLKDK+LKRA L E + IE+R A+KNK F SD IR
Sbjct: 473 NKLSILGLMP-SSSLAEVLKQLKDKSLKRAGLTEEQLQEQIEQRNVARKNKQFEISDGIR 531
Query: 188 ADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
+L KGIALMD T+WRPC P E+
Sbjct: 532 KNLATKGIALMDEPSGTVWRPCEPERSEE 560
>gi|110740110|dbj|BAF01956.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 140
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 90/138 (65%), Gaps = 14/138 (10%)
Query: 81 SDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
SDDL T L A + LK IN+ KKQ +++ ESL +E ++ VL +LG
Sbjct: 1 SDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-----ESLKALETTIRDVLTILG 54
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L+P ++YSEVL+QLK+KALKRA L E DVL ++ER A+KNK++ +SD IR DL + G
Sbjct: 55 LMP--TSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVG 112
Query: 195 IALMDVRKETIWRPCVPV 212
IALMD + T WRP +P+
Sbjct: 113 IALMDSPEGTTWRPAIPL 130
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTG--AFLDAL 98
TL DCE LS + E+ S + ++ + + R F MSDDL T+ +L G D L
Sbjct: 222 TLYDCEEMLSKYHEEGISVPVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLL 281
Query: 99 KFINNSKKQPKQQQLS--------------------------LIESLLKIENEVKVVLDV 132
K IN++ K+ Q I+ L+ +E E+K L V
Sbjct: 282 KAINSNMNDLKKLQQKLEQQQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSV 341
Query: 133 LGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
LGL+P S+ SEVL QLKDKALKRA L E + IE+R A+KNK F SD+IR L
Sbjct: 342 LGLMPP-SSLSEVLNQLKDKALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLAT 400
Query: 193 KGIALMDVRKETIWRPCVPVEQEQEAPLV 221
GI+LMD T WRPC P E+ +
Sbjct: 401 LGISLMDEPTGTSWRPCEPDRPEESGSVT 429
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 115/180 (63%), Gaps = 12/180 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAE--DCIKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
TL DCE LS Q+ + + P+ E + +K +++ F T M+DDLNT ++ +F ++
Sbjct: 315 TLVDCEQILS--QQVDKVAACNPSKEAIELVKSIKNTFRTSMADDLNTP-VVVASFSESF 371
Query: 99 KFINN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALK 155
KF+N+ ++ ++ + L+ SL + E++ V++VLG +P +YS+VL +++ ALK
Sbjct: 372 KFMNDLMHTRKGRKDKTRLV-SLQLLITEIQEVMNVLGFQIP---SYSKVLDEIRALALK 427
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQE 215
RA ++ ND+ ++ERA+A++ KD+++SDQIR +L GI LMD T+WRP V E++
Sbjct: 428 RAGMSMNDLAARLQERASAREAKDYARSDQIRLELAAAGIGLMDGGDGTLWRPIVVAEEQ 487
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL+DCE LS + I + I + + F + MS+DL+ + L A + LK
Sbjct: 425 TLKDCEECLSGHVRQSIGQPIPEDIQKRINNIHNAFSSSMSNDLHIAMALD-ALSEPLKI 483
Query: 101 INN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
+N+ +Q ++Q+L + E L +E + + +L LGL+ +YSEVL QLK KAL+RA
Sbjct: 484 MNDLMFTRQGRKQKLRM-EFLDSLEVKTRDLLSDLGLM--SPSYSEVLLQLKSKALRRAG 540
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQE 217
+ E++VL IE+RA A+ K++S+SD+IR L GIALMD T WRP +P+E+E+
Sbjct: 541 ITEDEVLQAIEKRADARAAKNYSESDRIRRKLAVLGIALMDEPSGTTWRPAIPLEEEEH 599
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 44/203 (21%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYT----RMSDDLNTSHILTGAFLD 96
TL DC+ LS ++E+ +I+ D +KL DE +T MSDDL T+ +L G F+
Sbjct: 367 TLHDCDEVLSLYREE----NISVPVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDG-FMG 421
Query: 97 ALKFINNS------------------------------KKQPKQQQLSLIESLLKIENEV 126
LK IN++ +KQP+ I++L+ +E E+
Sbjct: 422 LLKAINSNLNDFKKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDH----IQALISLEAEI 477
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
K L +LGL+P S+ EVL++LK+KALKRA L E + IE+R A+ NK F SDQI
Sbjct: 478 KNKLSILGLMPP-SSLVEVLKELKEKALKRAGLTEETLREQIEQRVAARNNKQFDVSDQI 536
Query: 187 RADLTRKGIALMDVRKETIWRPC 209
R L KGIALMD T+WRPC
Sbjct: 537 RKQLASKGIALMDEPTGTVWRPC 559
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 18/183 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D E +S + E SI + I++ F +MSDDL+T+ A LD L
Sbjct: 341 TLHDGEETVSLYGEHKLENSIPADDQKLIEENHSNFLEKMSDDLHTT-----AALDHLMK 395
Query: 101 INNSKKQPKQQQL------------SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQ 148
+ + K++Q I++L+ ++NEV L +LGL+P S+ +E L+Q
Sbjct: 396 LQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPM-SSLAEALKQ 454
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRP 208
LKDKALKRA + + +IE+R A+KNKDF++SD+IR +L+ GIALMD T+WRP
Sbjct: 455 LKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMDEPTGTLWRP 514
Query: 209 CVP 211
P
Sbjct: 515 SEP 517
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 29/196 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL DC+ +S +E+ S + + + F MSDDL T+ +L G F++ LK
Sbjct: 367 TLYDCDEVVSLHREENTSAPVPAEEQKLVDDHHKAFLESMSDDLRTTDVLDG-FMELLKA 425
Query: 101 INNSKKQPKQQQLSL---------------------------IESLLKIENEVKVVLDVL 133
IN + K+ Q L I++L + E+K L +L
Sbjct: 426 INGNLNDLKKLQQKLEQQKKKQQQQKKQQQKQQRPQKQPEDHIQALNALGAEIKHKLSIL 485
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+P S +EVL+QLK+KALKRA L E + IE R A+ NK F SDQIR +L K
Sbjct: 486 GLMPP-SPLAEVLKQLKEKALKRAGLTEESLSEQIEHRIAARNNKQFEVSDQIRKELASK 544
Query: 194 GIALMDVRKETIWRPC 209
GIALMD T+WRPC
Sbjct: 545 GIALMDEPTGTVWRPC 560
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 21/183 (11%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D E +S + E SI + I++ R F +MSDDL+T+ A LD L
Sbjct: 312 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTT-----AALDHLMK 366
Query: 101 INNSKKQPKQQQLS------------LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQ 148
+ + K++Q I++L+ ++NEV L +LGL+P S + +Q
Sbjct: 367 LQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP----MSSLAEQ 422
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRP 208
LKDKALKRA + + +IE+R A+KNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 423 LKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLWRP 482
Query: 209 CVP 211
P
Sbjct: 483 SEP 485
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 28/188 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYT----RMSDDLNTSHILTGAFLD 96
TL DC+ LS ++E+ +I+ D +KL DE +T MSDDL T+ +L G F+
Sbjct: 367 TLHDCDEVLSLYREE----NISVPVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDG-FMG 421
Query: 97 ALKFINNSKKQPKQQQLSL---------------IESLLKIENEVKVVLDVLGLLPEGST 141
LK ++Q K+QQ I++L+ +E E+K L +LGL+P S
Sbjct: 422 LLKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDHIQALISLEAEIKNKLSILGLMPPSS- 480
Query: 142 YSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVR 201
++++LK+KALKRA L E + IE+R A+ NK F SDQIR L KGIALMD
Sbjct: 481 ---LVEELKEKALKRAGLTEETLREQIEQRVAARNNKQFDVSDQIRKQLASKGIALMDEP 537
Query: 202 KETIWRPC 209
T+WRPC
Sbjct: 538 TGTVWRPC 545
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 21/183 (11%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D E +S + E SI + I++ R F +MSDDL+T+ A LD L
Sbjct: 382 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTT-----AALDHLMK 436
Query: 101 INNSKKQPKQQQL------------SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQ 148
+ + K++Q I++L+ ++NEV L +LGL+P S + +Q
Sbjct: 437 LQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP----MSSLAEQ 492
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRP 208
LKDKALKRA + + +IE+R A+KNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 493 LKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLWRP 552
Query: 209 CVP 211
P
Sbjct: 553 SEP 555
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 21/183 (11%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D E +S + E SI + I++ R F +MSDDL+T+ A LD L
Sbjct: 341 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTT-----AALDHLMK 395
Query: 101 INNSKKQPKQQQL------------SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQ 148
+ + K++Q I++L+ ++NEV L +LGL+P S + +Q
Sbjct: 396 LQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP----MSSLAEQ 451
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRP 208
LKDKALKRA + + +IE+R A+KNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 452 LKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLWRP 511
Query: 209 CVP 211
P
Sbjct: 512 SEP 514
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 33/202 (16%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TLQD + +S + +D + + + K +EF M++DL+T L + +
Sbjct: 327 TLQDSQEVISLYCDDKLDFPVPTGDQAVVDKNHEEFLKHMANDLHTKGALD-ELMKPIXA 385
Query: 101 INNSKKQPKQQQLSL-------------------------------IESLLKIENEVKVV 129
INN+ K+ Q L +++L+ + EV
Sbjct: 386 INNNLSDLKKLQQKLEQEKKKQAVKKQQQQQTEEGKQQAQKQTGHYVQALVALHGEVTSK 445
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L +LGL+P S +E +++LKDKALKRA ++E ++ +I +R +KNKDF++SD+IR
Sbjct: 446 LSILGLMPXPSL-AEAVKELKDKALKRAGMSEEELHQVIXQRTVTRKNKDFAESDRIRTV 504
Query: 190 LTRKGIALMDVRKETIWRPCVP 211
L+ +GIALMD T+W+P P
Sbjct: 505 LSARGIALMDEPTGTVWKPAEP 526
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 15/186 (8%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D + + Q++ +S ++ A + K LR + ++DDLNT + GA + LK
Sbjct: 318 TLFDAKRCVEGSQKEEKSYVVSQKAAEIAKALRLSLRSSLADDLNTP-VTIGALSEPLKL 376
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGST--------YSEVLQQL 149
+N +SKK K + S SL + EV+ L+VLG + S+VL++L
Sbjct: 377 MNELLHSKKGRKDK--SRYSSLDLLRLEVEQALEVLGFSVADYSQALITQLFLSQVLEEL 434
Query: 150 KDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRK-ETIWRP 208
+ KALKRA L E+++L I ERA A+ +KDF KSD+IR L+ GI+LMD ET+WRP
Sbjct: 435 RSKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISLMDGGGDETLWRP 494
Query: 209 CVPVEQ 214
V E+
Sbjct: 495 SVTSEE 500
>gi|212724084|ref|NP_001132147.1| uncharacterized protein LOC100193566 [Zea mays]
gi|194693568|gb|ACF80868.1| unknown [Zea mays]
Length = 170
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 90/170 (52%), Gaps = 34/170 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS------------------------- 114
MS+DL T+ +L F++ LK IN+S K+ Q
Sbjct: 1 MSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQQKQQQQKQQ 60
Query: 115 --------LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
I++L+ +E E+K L +LGL+P S+ +EVL+QLKDK+LKRA L E +
Sbjct: 61 QLQKQPEDYIQALIALETELKNKLSILGLMP-SSSLAEVLKQLKDKSLKRAGLTEEQLQE 119
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQEQ 216
IE+R A+KNK F SD IR +L KGIALMD T+WRPC P E+
Sbjct: 120 QIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPCEPERSEE 169
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL D + + Q++ +S ++ A + K LR + ++DDLNT + GA + LK
Sbjct: 318 TLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSLADDLNTP-VTIGALSEPLKL 376
Query: 101 IN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
+N +SK+ K + S SL + EV+ L+VLG + YS+ L KALKRA
Sbjct: 377 MNELLHSKRGRKDK--SRYSSLDLLRLEVEQALEVLGF--SVADYSQALFLPTCKALKRA 432
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRK-ETIWRPCVPVEQ 214
L E+++L I ERA A+ +KDF KSD+IR L+ GI+LMD ET+WRP V E+
Sbjct: 433 GLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISLMDGGGDETLWRPSVTSEE 490
>gi|297789694|ref|XP_002862786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308510|gb|EFH39044.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 77
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 145 VLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKET 204
VL+QLK+KALKRA L E DVL ++ER A+KNK++ +SD IR DL GIALMD + T
Sbjct: 1 VLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIALMDSPEGT 60
Query: 205 IWRPCVPV 212
WRP +P+
Sbjct: 61 TWRPAIPL 68
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 8/138 (5%)
Query: 80 MSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL 136
+ DDLNT A + LK +N ++KK K ++++ ++ + VL++LGL
Sbjct: 402 LCDDLNTPQAFA-ALSEPLKTMNDLLHTKKGKKAG--GRLQTIATLQQALNSVLELLGL- 457
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
VL +++ +AL RA L E DV IE RA A+ KD++ +D+ RA L +GI
Sbjct: 458 -GAGDIGAVLVEMRQRALHRAGLKEQDVELSIERRAVARAAKDYASADKERAFLAERGIM 516
Query: 197 LMDVRKETIWRPCVPVEQ 214
+MD + T+WRP +P Q
Sbjct: 517 IMDGSEGTLWRPGIPDSQ 534
>gi|255572118|ref|XP_002526999.1| hypothetical protein RCOM_1309380 [Ricinus communis]
gi|223533634|gb|EEF35371.1| hypothetical protein RCOM_1309380 [Ricinus communis]
Length = 157
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
Query: 41 TLQDCEVALSPFQE---------DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILT 91
TLQDCE ALS F++ +++ IT A+ CI RDEF T+MS DL+TSHILT
Sbjct: 29 TLQDCEDALSLFEDGSLKEGAGQNSKVFGITADAKKCINTHRDEFETKMSHDLSTSHILT 88
Query: 92 GAFLDALKFINNS 104
GAF DALKFI +S
Sbjct: 89 GAFQDALKFIKSS 101
>gi|356502871|ref|XP_003520238.1| PREDICTED: uncharacterized protein LOC100804654 [Glycine max]
Length = 240
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 63/128 (49%), Gaps = 40/128 (31%)
Query: 41 TLQDCEVALSPFQE-----DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFL 95
TLQDC+ +S + + + I A ++CIKKL EF T+MSDDL T ILTGA
Sbjct: 147 TLQDCKDVVSALHQGETKKNEKVPQINEATKECIKKLNVEFQTKMSDDLQTPVILTGALQ 206
Query: 96 DALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ALKF+N S K K VLQQLKDKALK
Sbjct: 207 EALKFVNTSLKMLK-----------------------------------VLQQLKDKALK 231
Query: 156 RAELAEND 163
RA LAE++
Sbjct: 232 RAGLAEDE 239
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 80 MSDDLNTSHILTGAFLDA-LKFINN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
++DDLNT ++ A L A LK +N+ + ++ + + +L + ++ VL+ +G+ P
Sbjct: 530 LNDDLNTPAVM--ATLSAPLKSMNDFMTTKAGKKAVGRVRALQALLTSIEGVLEAVGM-P 586
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
G L +L+ KAL RA L E+ +L IEER A+ KDF++SD++R +L+ +GI L
Sbjct: 587 RGEE-DVFLGELRAKALHRAGLTEDALLAKIEERKKARDAKDFAESDRLRDELSARGIGL 645
Query: 198 MDVRKETIWRPCVPV 212
MD WRP VPV
Sbjct: 646 MDG-AAVAWRP-VPV 658
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L++EF + DDLNT+ ++ G + ++ N + + Q + L I N++
Sbjct: 394 LENLKNEFIMALDDDLNTAMVM-GLVFEWVRTWNKLIDENRANQKD-AKDFLDIINDIHK 451
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VL V G S + L +LK K + + E D+L LIEER A+KN+DF +SD+IR
Sbjct: 452 VLGVFG-----SDANAYLDELKQKGMAGLLVLEEDILKLIEERKLARKNRDFKRSDEIRD 506
Query: 189 DLTRKGIALMD 199
L ++GI L D
Sbjct: 507 QLLKQGITLKD 517
>gi|373468293|ref|ZP_09559550.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371766384|gb|EHO54639.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 469
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ ++ F + +K N + + + + + LLK+ ++ +
Sbjct: 352 KVLKDKFVAAMDDDFNTADAISAIF-ELIKLSNTTLNETSTAEYA--KGLLKV---IEPL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E ++AE+ ++++ LIE+R A+KNKDF+ +D+IR D
Sbjct: 406 CDVLGIITE----------------RKAEILDSEIEDLIEQRTQARKNKDFALADKIRND 449
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D R+ W+
Sbjct: 450 LLEKGIVLEDTREGVKWK 467
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
+L D +VAL R S + E + R F ++DD NT L+ F D ++
Sbjct: 308 SLNDAKVALERLYNALRDQSCSEIPESSDYRTR--FTAALNDDFNTPVALSVLF-DLVRD 364
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N +K + + L E+L E+ + VLGLL + + Y LK+ ++
Sbjct: 365 LNKAKTESAE----LAETLAA---ELTNLASVLGLLYQDADYF-----LKNGTFDAEGIS 412
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+D+ LIEER A+K+K+FS+SD+IR L KGI L+D R+ T W
Sbjct: 413 ADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSREGTSW 458
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 48 ALSPFQEDARSGSITPAAEDC------IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
AL+ E SG+ TPA D + F M DD NT+ L G D ++ I
Sbjct: 322 ALAGIDERLASGAHTPADADNTEFAEKVAGFAGRFGDAMDDDFNTALAL-GHLFDLVRVI 380
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N ++ L+E K++ EV + VLG+ S + LQ++KD+ E++
Sbjct: 381 N---RELPTASTGLLE---KVKAEVAKMAAVLGICD--SVPAAFLQRMKDRKTSDMEMSA 432
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ LI ERA A+K K+F + D+IR L K I L+D + T W+
Sbjct: 433 EEIETLIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQGTTWK 478
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 40 ITLQDCEVAL-------SPFQEDARSGSITPA---AEDCIK--KLRDEFYTRMSDDLNTS 87
I +QD E AL Q+ A+ PA A+D K + F M++D NT+
Sbjct: 307 IAMQDAETALVRLYECLHDIQQLAKGDPTLPALISAKDAAKLNSIETRFQEAMNNDFNTA 366
Query: 88 HILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE-VKVVLDVLGLLPEGSTYSEVL 146
L G DA+K IN +++ +L +LK ++ + ++GLL E + L
Sbjct: 367 LAL-GVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTLIQKLAGIVGLLQEDANL--FL 423
Query: 147 QQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
QQ K+K L ++ E ++ I++R A+ NKD+++SD+IR L KGI L D T W
Sbjct: 424 QQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRDILLEKGITLKDGADGTGW 483
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + G D ++ +N + K++ +L +++ + + DVLG+
Sbjct: 364 FREAMDDDFNTA-LAMGHIFDLVRCVNRVLSEAKERSNTLSALCAQVKANIGKIADVLGI 422
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
S + +L +LKD+ +++ ++ LI ERA A+K KDF +SD+IR L K I
Sbjct: 423 FT--SEPASLLTRLKDRKASELDISVEEIERLITERAAARKAKDFKRSDEIRDFLLGKNI 480
Query: 196 ALMDVRKETIW 206
L+D + T W
Sbjct: 481 VLLDSAQGTSW 491
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F M DD NTS + F + +K +N + K+ +Q +L S L+ + ++L
Sbjct: 348 ERFNIAMRDDFNTSEAIAVLF-EIIKELNRAVKEENAEQATLYYSTLR------HLTNIL 400
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ E L+ D + L+E D+ I++R AKKNKDF+++D+IR L +
Sbjct: 401 GLVQ--YNVDEFLK--SDIGQEALGLSEADITDFIQQRVDAKKNKDFARADEIRQSLLAQ 456
Query: 194 GIALMDVRKETIWR 207
G+ L D R+ TIWR
Sbjct: 457 GVVLEDTRQGTIWR 470
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 8/135 (5%)
Query: 80 MSDDLNTSHILTGAFLDA-LKFINN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
++DD+NT ++ A L A LK +N+ + ++ + + +L + + V+ +++ +G+
Sbjct: 365 LNDDMNTPGVI--ATLSAPLKSMNDFMTTKAGKKAVGRVGALQSLLSTVEGLMEAVGMPK 422
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
+ +L +L+ +AL RA L E+D+L IEER A+ KDF++SD++R +L+ +G+ L
Sbjct: 423 DEENV--ILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAESDRLRDELSARGVGL 480
Query: 198 MDVRKETIWRPCVPV 212
MD WRP VPV
Sbjct: 481 MD-GSAVPWRP-VPV 493
>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
gi|167663621|gb|EDS07751.1| cysteine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 468
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 29/158 (18%)
Query: 55 DARSGSITPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+A+S S+T E K + EF M DD NT+ + F D +K+IN + K +
Sbjct: 333 NAKSESMTQEEEAAFAKTAEYVQEFERAMDDDFNTADAIASVF-DLVKYINTTADADKSK 391
Query: 112 QL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ +L + L+K+ DVLGL+ + K+ E+ D+ +IE
Sbjct: 392 EFLQNLFDLLVKL-------TDVLGLIVD----------------KKEEMLAEDIEKMIE 428
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K KDF+++D IR +L KGI L D R+ W+
Sbjct: 429 ERQAARKAKDFARADAIRDELLAKGIVLEDTREGVKWK 466
>gi|336421767|ref|ZP_08601922.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009616|gb|EGN39607.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 468
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 29/158 (18%)
Query: 55 DARSGSITPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+A+S S+T E K + EF M DD NT+ + F D +K+IN + K +
Sbjct: 333 NAKSESMTQEEEAAFAKTAEYVQEFERAMDDDFNTADAIASVF-DLVKYINTTADADKSK 391
Query: 112 QL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ +L + L+K+ DVLGL+ + K+ E+ D+ +IE
Sbjct: 392 EFLQNLFDLLVKL-------TDVLGLIVD----------------KKEEMLAEDIEKMIE 428
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K KDF+++D IR +L KGI L D R+ W+
Sbjct: 429 ERQAARKAKDFARADAIRDELLAKGIVLEDTREGVKWK 466
>gi|342216509|ref|ZP_08709156.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587399|gb|EGS30799.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 461
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 56 ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
A+ GS P + I++L++EF M DD+NT+ L+ F D K IN Q +++ L
Sbjct: 332 AKPGS-DPNFDQDIQRLKEEFCQAMEDDMNTADALSKLF-DLSKRIN----QGINEEIGL 385
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
ESL + + VLGLL K + AE +VL LI+ER A+
Sbjct: 386 -ESLKGAQESYLSLAKVLGLL-----------------YKEEDQAEEEVLKLIKEREEAR 427
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KNKDF+++D +R L GIA+ D R T W+
Sbjct: 428 KNKDFARADALRDQLLEMGIAIEDSRDGTKWK 459
>gi|402312548|ref|ZP_10831472.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400369006|gb|EJP22009.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ ++ F + +K N S + L LL I ++ +
Sbjct: 352 KVLKDKFVAAMDDDFNTADAISAIF-ELIKLSNTSLNE--NSTLEYANGLLNI---IEPL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E ++ E+ ++++ LIE+R A+KNKDF+ +D+IR D
Sbjct: 406 CDVLGIITE----------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRND 449
Query: 190 LTRKGIALMDVRKETIWR 207
L +GI L D R+ W+
Sbjct: 450 LLDRGIVLEDTREGVKWK 467
>gi|404483021|ref|ZP_11018246.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404344111|gb|EJZ70470.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 492
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ ++ F + +K N S + L LL I ++ +
Sbjct: 375 KVLKDKFVAAMDDDFNTADAISAIF-ELIKLSNTSLNE--NSTLEYANGLLNI---IEPL 428
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E ++ E+ ++++ LIE+R A+KNKDF+ +D+IR D
Sbjct: 429 CDVLGIITE----------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRND 472
Query: 190 LTRKGIALMDVRKETIWR 207
L +GI L D R+ W+
Sbjct: 473 LLDRGIVLEDTREGVKWK 490
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 40 ITLQDCEVALSPFQEDARSGSITPAAEDC------IKKLRDEFYTRMSDDLNTSHILTGA 93
+ L+ AL+ E SG+ TPA D + F M DD NT+ L G
Sbjct: 314 LGLERIYKALAGIYERLASGANTPAGADNAEFVEKVAGFAGRFGDAMDDDFNTALAL-GH 372
Query: 94 FLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
D ++ IN ++ L+E + + EV + VLG+ S + LQ++KD+
Sbjct: 373 LFDLVRVIN---RELPTASTGLLE---QAKAEVAKMAAVLGICD--SVPAAFLQRMKDRK 424
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E++ ++ LI ERA A+K K+F + D+IR L K I L+D + T W+
Sbjct: 425 TSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQGTTWK 478
>gi|300813898|ref|ZP_07094202.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511961|gb|EFK39157.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 189
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 31/140 (22%)
Query: 73 RDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIENEVK 127
R F M DDLNT+ +T F D +K IN NS K+ ++ +SL+++L KI
Sbjct: 74 RQSFEKAMEDDLNTADAITAIF-DLVKDINVNLDENSAKKLLEEGMSLLKTLTKI----- 127
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
LG++ ++ + ++L+LI+ER A+KNKDF ++D+IR
Sbjct: 128 -----LGIMEREKNCDDL---------------DEEILNLIKEREDARKNKDFKRADEIR 167
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L KGI + D RK W+
Sbjct: 168 DELLEKGIEIKDTRKGIEWK 187
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 61 ITPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
+ PA + +KL+ F M DD NT+ L G +A++ N + Q + +
Sbjct: 345 LPPAGAELHEKLQSLISRFREAMDDDFNTAQAL-GVLFEAVRATNRFMAESGDQTPATLA 403
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
L ++ DVLGL S + L+ +K + E++ ++ LI ERA A+ N
Sbjct: 404 LLGQVRRLFAETGDVLGLFT--SQPAAWLESIKQAKSDQMEISPQEIEQLIAERAAARTN 461
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
+DF + D+IR L +KGI L+D + T W
Sbjct: 462 RDFKRGDEIRDLLLQKGIQLLDSPQGTTW 490
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
E + + R+ F+ M DD NTS + D K +N +KK+ + + LSL + ++ +
Sbjct: 337 EPLVGEYRERFHQAMDDDFNTSSAVA-VLFDMAKAVNVAKKEDRTRALSLAKGMVDL--- 392
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+VLGLL E L Q + + + +AE + I +R A+ NKDF++SD+
Sbjct: 393 ----AEVLGLL---QADPESLMQGEGEEVGGLSVAE--IEDFIAQRNAARANKDFAESDR 443
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L KG+ L D R+ T W+
Sbjct: 444 IRDLLKEKGVLLNDSREGTSWQ 465
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLI-ESLLKIENEVKVVLDVL 133
EF M DD N L GA +N +P + +L+ +L + + V+ V VL
Sbjct: 353 EFEAAMDDDFNCPGAL-GALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVL 411
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL + T + L + +D+A+K + V L+ ER A+K+K+F+++D++R++L +
Sbjct: 412 GLFEDDPT--QWLLRRRDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQ 469
Query: 194 GIALMDVRKETIWRPCVPV 212
G+ +MD T W+ PV
Sbjct: 470 GVEIMDTVAGTSWKVAAPV 488
>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 458
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLI-ESLLKIENEVKVVLDVL 133
EF M DD N L GA +N +P + +L+ +L + + V+ V VL
Sbjct: 323 EFEAAMDDDFNCPGAL-GALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVL 381
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL + T + L + +D+A+K + V L+ ER A+K+K+F+++D++R++L +
Sbjct: 382 GLFEDDPT--QWLLRRRDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQ 439
Query: 194 GIALMDVRKETIWRPCVPV 212
G+ +MD T W+ PV
Sbjct: 440 GVEIMDTVAGTSWKVAAPV 458
>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
Length = 364
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 78 TRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
T M DD NTS + F + +K +N + K+ Q +L S L+ + ++LGL+
Sbjct: 243 TSMRDDFNTSEAIAVLF-EIIKELNRAVKEENAAQSTLYYSTLR------HLTNILGLVQ 295
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
+ L+ D + L+E D+ I++R AKKNKDF+++D+IR L +G+ L
Sbjct: 296 --YNVDDFLKS--DIGQEALGLSEADIEDFIQQRVDAKKNKDFARADEIRQSLLAQGVVL 351
Query: 198 MDVRKETIWR 207
D R+ TIWR
Sbjct: 352 EDTRQGTIWR 361
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
+ P A + R+ F M DD NT+ L D + +N +K++ +L L
Sbjct: 324 GVAPVAGEVAAGYRERFIAAMDDDFNTAEALA-VLFDLARELNRAKQEAPAHAPALAHEL 382
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
E+ VL + G PEG LQ R ++E D+ IE RA AKK KD
Sbjct: 383 ----KELGGVLGLFGQDPEG-----FLQ----AGAGRLPMSEEDIEARIEARAQAKKAKD 429
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIW 206
F+ +D IR +L GI L D R T W
Sbjct: 430 FATADGIRDELAALGIVLKDGRDGTTW 456
>gi|336427889|ref|ZP_08607880.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336008638|gb|EGN38651.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 469
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 22/133 (16%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M DDLNT+ + F + +KFIN + + I LL NE+K + DV G
Sbjct: 357 KFDEAMDDDLNTADAIAAIF-ELVKFINTN--TSADNSAAYIRELL---NEIKELSDVCG 410
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L+ E K+ E+ ++ V LIEER A+K K+F+++D+IR +L KG
Sbjct: 411 LIVE----------------KKEEMLDSSVEALIEERQVARKAKNFARADEIRDELLAKG 454
Query: 195 IALMDVRKETIWR 207
I L D R+ W+
Sbjct: 455 IILEDTREGVKWK 467
>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
gi|169257998|gb|EDS71964.1| cysteine--tRNA ligase [Anaerofustis stercorihominis DSM 17244]
Length = 468
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ + K R+EF M DD+NT++ ++ + D K IN++ + +++ + + +E
Sbjct: 346 NSLPKYREEFKNAMEDDINTANAVSTIY-DLSKDINSNVNENSSKEMIMKSYEMYME--- 401
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ VLGLL + K E+ E++++ LIE+R A+KNKDF+ +D+I
Sbjct: 402 --LNGVLGLLTKE---------------KEDEILEDEIIELIEKRQNARKNKDFALADKI 444
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL KGI L D R+ W
Sbjct: 445 RDDLLDKGIVLEDTREGVKWH 465
>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 465
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 36/181 (19%)
Query: 35 TGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK---KLRDEFYTRMSDDLNTSHILT 91
T N + L + + L E +T E+ +K K ++F M DDLNT+ +T
Sbjct: 311 TKNSSKRLYNAKYKLEDAIEKTSVEKMTEEEENLLKGYDKHIEKFEKAMEDDLNTADAIT 370
Query: 92 GAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVL 146
F D +K IN NS K+ ++ L L++ L K VLG++ E
Sbjct: 371 AIF-DLVKDINLNLDENSSKEVLEKSLELLKKLTK----------VLGIMEE-------- 411
Query: 147 QQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+R E++ D+ LI+ER A+KNKDF+++D+IR +L GI + D R T W
Sbjct: 412 --------EREEIS-GDIEELIKERNEARKNKDFTRADEIRDELKNMGIEIEDTRSGTTW 462
Query: 207 R 207
+
Sbjct: 463 K 463
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 52 FQEDARSGSITP--AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK 109
F RS S P A +++ R+ F + DDLNT+ + G D +K +N+S +
Sbjct: 328 FALGHRSASAEPDGALRRMLREGRERFLAALDDDLNTAGAI-GVVFDVVKGVNSSLGERP 386
Query: 110 QQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
L + EV+ +L +LG+ PE E E DV LI+
Sbjct: 387 DADLEALGQAKTFFLEVEDILGILGVAPE-------------------ESLEEDVDRLIQ 427
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K +DF+++D IR +L +GI L D + W+
Sbjct: 428 ERQAARKGRDFARADAIRDELLARGILLEDTPQGPRWK 465
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
IK+ +FY M+DD NT+ L G+ + ++ IN K + ++ ++
Sbjct: 348 IKQAETKFYEEMNDDFNTAGAL-GSVFEVVRLINTYLKDNSSIDFKVCKAAQTFFTKIDG 406
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
++ ++GL E + EL +++ +IEER A+K +DF+KSD IR
Sbjct: 407 IMGIMGLESE-----------------KEELDTSEIESMIEERTAARKARDFAKSDAIRD 449
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T W+
Sbjct: 450 QLAEKGIILEDTPEGTKWK 468
>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 467
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 31/140 (22%)
Query: 73 RDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIENEVK 127
R F M DDLNT+ +T F D +K IN NS K+ ++ +SL+++L KI
Sbjct: 352 RQSFEKAMEDDLNTADAITAIF-DLVKDINVNLDENSAKKLLEEGMSLLKTLTKI----- 405
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
LG++ K + + ++L+LI+ER A+KNKDF ++D+IR
Sbjct: 406 -----LGIMERE---------------KNCDDLDEEILNLIKEREDARKNKDFKRADEIR 445
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L KGI + D RK W+
Sbjct: 446 DELLEKGIEIKDTRKGIEWK 465
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ L G D ++ IN + +S +E L +++ EV + LG+
Sbjct: 356 FIEAMDDDFNTAMAL-GHIFDLVRSIN------RALPVSPLELLKRVKEEVARIAATLGV 408
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
S + LQ++KD+ E+ ++ LI ERA A+++K+F +SD+IR L K I
Sbjct: 409 C--DSVPAAFLQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEKDI 466
Query: 196 ALMDVRKETIWR 207
L+D + T W+
Sbjct: 467 VLLDTPQGTTWK 478
>gi|417556099|ref|ZP_12207159.1| cysteine--tRNA ligase [Gardnerella vaginalis 315-A]
gi|333603123|gb|EGL14545.1| cysteine--tRNA ligase [Gardnerella vaginalis 315-A]
Length = 529
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L ++F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 382 NLPEDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQNQNENQSNGIKSLIKTCVLQV 441
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 442 RAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 501
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 502 RADAIRDSLTAAGVVIEDCAQGSSWH 527
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 80 MSDDLNTSHILTGAFLDALK----FINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
+SDDLNT + + LK F++ K + Q +++ +++L++ E LD +GL
Sbjct: 345 LSDDLNTP-LAIASLSSPLKLLNDFVSTKKGKKAQGRIAAMKALVRAVTET---LDAVGL 400
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ +VL++L+ L RA L+ DV + R A++ KDF++SD+IR +L KG+
Sbjct: 401 PSAKADAVDVLERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDRIRDELGAKGV 460
Query: 196 ALMDVRKETIWRPCVPVEQE 215
ALMD + +WRP V +E
Sbjct: 461 ALMDGGSQ-VWRPSPVVAEE 479
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTS---HILTGAFLDAL 98
L++ ++ LSP DA+ AE+ + Y DDLNT L+G
Sbjct: 493 LENSKLKLSPLAADAKK-----LAEETKVSVAQALY----DDLNTPLAIASLSGPLKTTN 543
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
F+ + +LS + SL+ +E++ L +LGL + +L +LK ALKRA
Sbjct: 544 DFLTTKAGKKAVGRLSALSSLV---SELENTLSILGLPTAVDKSTSILAELKALALKRAG 600
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG-IALMDVRKETIWRPCVPVE 213
L E D+ L+ +RA A+ K+F +SD++R +L KG + + WRP VP E
Sbjct: 601 LEEKDLEALMAQRANARAAKNFEESDRLREELASKGIGLMDGGGGDDAWRPIVPAE 656
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDA--LKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
+ + F M DD NT L F A + I+ + PK + L ++ + + V
Sbjct: 346 IEERFSEAMDDDFNTPRALAILFEAARTINRISGTNSVPKPELLREVKDRI-----LHVA 400
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
+VLG+L E T E L++ + ++E + I ERA A+K+K+F+++D+IR +
Sbjct: 401 REVLGILREDQT--EFLERARKAGAPELGISEELIQQYIVERAEARKSKNFARADEIRNE 458
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D K TIW+
Sbjct: 459 LASKGIVLEDTPKGTIWK 476
>gi|415703387|ref|ZP_11459265.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 284V]
gi|388052847|gb|EIK75862.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 284V]
Length = 529
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L +F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 382 NLPKDFTKAMNDDINVSGALAAIFTAIRSGNSLLDDYAQNQNENQSNGIKSLIKTCVLQV 441
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 442 RAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 501
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 502 RADAIRDSLTAAGVVIEDCAQGSSWH 527
>gi|298674878|ref|YP_003726628.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
gi|298287866|gb|ADI73832.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
Length = 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 31/200 (15%)
Query: 11 PAFVRTLLLDIFW---LNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P VR +LL + LN F ++ Q + N LQ+ L + SG AE
Sbjct: 312 PEAVRYVLLTTHYRQKLNFTFKNL-QASQNAIDRLQELIFNLKHIGNE--SGDF--EAEK 366
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
+K++D+F + +DLN + + G +A+K IN S QQ+ ++ +LK ++V
Sbjct: 367 FAEKVKDDFIKELENDLNIAGAI-GVLFEAVKTINKSLTNIGQQEADILLDMLKDVDKVL 425
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
VLD +SE +A L E ++ LIE+R A+ +KDF+ +D+IR
Sbjct: 426 GVLD----------FSE-----------QAPL-EKEIQELIEQRDRARDSKDFATADKIR 463
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L ++GI L+D + TIW+
Sbjct: 464 DNLKKRGIHLIDTPEGTIWK 483
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F D ++ +N + ++ I+ EV + VLG+
Sbjct: 364 FGEAMDDDFNTALAMAHVF-DLVRCVNRVLSETAGASDNICSLCTLIKAEVAKIAGVLGI 422
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
S + L++LK + ++A +++ LI ER A+K KDF +SD+IR L K I
Sbjct: 423 FS--SKPASFLERLKSRKAGNLDIAVDEIERLIAERTAARKAKDFKRSDEIRDQLAAKNI 480
Query: 196 ALMDVRKETIW 206
L+D ++ T W
Sbjct: 481 VLLDSQQGTTW 491
>gi|419718461|ref|ZP_14245778.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305296|gb|EIC96664.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 469
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ ++ F + +K N + + S +E + N ++ +
Sbjct: 352 KVLKDKFADAMDDDFNTADAVSAIF-ELIKLSNTTLSEN-----STVEYAKGLLNVIEPL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E ++ E+ ++++ LI R A+KNKDF+ +D+IR D
Sbjct: 406 CDVLGIITE----------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRND 449
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D R+ W+
Sbjct: 450 LLEKGIVLEDTREGVKWK 467
>gi|415706921|ref|ZP_11461768.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 0288E]
gi|388053921|gb|EIK76866.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 0288E]
Length = 529
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L ++F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 382 NLPEDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQNQNENQSNGIKSLIKTCVLQV 441
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 442 RAMLDTLGLDPYSPQWRSNAQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 501
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 502 RADAIRDSLTAAGVVIEDCAQGSSWH 527
>gi|385801356|ref|YP_005837759.1| cysteine--tRNA ligase [Gardnerella vaginalis HMP9231]
gi|333393862|gb|AEF31780.1| cysteine--tRNA ligase [Gardnerella vaginalis HMP9231]
Length = 529
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L +F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 382 NLPKDFTKAMNDDINVSGALAAIFTAIRSGNSLLDDYAQNQNENQSNGIKSLIKTCVLQV 441
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 442 RAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 501
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 502 RADAIRDSLTAAGVVIEDCAQGSSWH 527
>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 470
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 11 PAFVRTLLLDIFW---LNELFASIPQYTGNETITLQDCEVAL----SPFQEDARS-GSIT 62
PA +R +L + LN +I Q N + +C L S F D +S G+
Sbjct: 286 PAAIRYFILSTHYRSPLNFTDETIAQ-AENSVDRIANCAANLKHRLSTF--DGQSEGAAA 342
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESL 119
D I +L+ +F +M DD NT +T F +A +++N + + I +L
Sbjct: 343 GELGDRIAQLKAQFEAKMGDDFNTPDAITAVFELVTEANQYMNRADASSEG-----IAAL 397
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
L ++ VL GLLPE T AEL ++++ LI ER A+ K+
Sbjct: 398 LAALEQMNTVL---GLLPEAGT--------------DAELLDDEIDALIVERTEARAAKN 440
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
++++D+IR LT KGIAL D + WR
Sbjct: 441 WARADEIRNLLTEKGIALEDTPQGIRWR 468
>gi|308235882|ref|ZP_07666619.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311115022|ref|YP_003986243.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|310946516|gb|ADP39220.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
Length = 529
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L +F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 382 NLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQNQNENQSNGIKSLIKTCVLQV 441
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 442 RAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 501
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 502 RADAIRDSLTAAGVVIEDCAQGSSWH 527
>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 469
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ ++ F + +K N + + S +E + N ++ +
Sbjct: 352 KVLKDKFADAMDDDFNTADAVSAIF-ELVKLSNTTLNEN-----STVEYAKGLLNVIEPL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E ++ E+ ++++ LI R A+KNKDF+ +D+IR D
Sbjct: 406 CDVLGIITE----------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRND 449
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D R+ W+
Sbjct: 450 LLEKGIVLEDTREGVKWK 467
>gi|415704962|ref|ZP_11460233.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 75712]
gi|388051684|gb|EIK74708.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 75712]
Length = 526
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L +F M+DD+N S L F +++ + + Q + I+SL+K +V
Sbjct: 379 NLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQNQNENQSNGIKSLIKTCVLQV 438
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + + Q+ +D AE+ VL + +E+RA A+ KDF+
Sbjct: 439 RAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVLESLIANQLEQRAIARAAKDFA 498
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 499 RADAIRDSLTAAGVVIEDCAQGSSWH 524
>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 469
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K L+D+F M DD NT+ +T F + +K N S + S +E + N + +
Sbjct: 352 KVLKDKFVIAMDDDFNTADAITAIF-ELIKLSNTSLNEK-----STVEYANGLLNIILPL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
D LG++ E ++ E+ ++++ LIE+R +A+KNKDF+ +D+IR +
Sbjct: 406 CDTLGIITE----------------RKVEILDSEIEDLIEQRTSARKNKDFALADKIRNE 449
Query: 190 LTRKGIALMDVRKETIWR 207
L GI L D R+ W+
Sbjct: 450 LLEMGIVLEDTREGVKWK 467
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN-SKKQPKQQQLSLIESLLKIENEVK 127
++ L+ EF M DD NT+ L G + +K IN K+P Q + I+ L+ + +K
Sbjct: 351 LENLKPEFEKAMDDDFNTAKAL-GILFEFIKEINRFMDKKPSQNKE--IDFLVTAKRAIK 407
Query: 128 VVLDVLGLLPEGST--YSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ VL L Y ++L+ +K+ + E ++ LI+ER A+KNKD+ K+D
Sbjct: 408 EIGSVLNLFQRQPVDWYRDLLK------VKKIAIKEEEINRLIKERTEARKNKDWKKADS 461
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L KGI L D TIW+
Sbjct: 462 IREQLLSKGIILEDKPDRTIWK 483
>gi|430748585|ref|YP_007211493.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430732550|gb|AGA56495.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
Length = 482
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 26/158 (16%)
Query: 54 EDARSGSIT--PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
E AR+ T P + I ++R F+ +MSDD NT +T F ++ + + K++
Sbjct: 345 EQARASGSTGEPELDQRIAEIRARFHEKMSDDFNTPDAVTALF----DLVSEANQALKRE 400
Query: 112 QLS--LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
LS +I LL +E++ + VLG LP QL+D+ ++R LI
Sbjct: 401 VLSGAVIRVLL---DEMEAMDRVLGFLPPADA-----AQLEDEEIER----------LIA 442
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A++NK+++++D+IR L +GI L D + WR
Sbjct: 443 ERTEARRNKNWARADEIRDLLANRGILLEDTPQGVRWR 480
>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
gi|149751829|gb|EDM61760.1| cysteine--tRNA ligase [Dorea longicatena DSM 13814]
Length = 468
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 29/164 (17%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSK 105
L E+A++ +IT A + K + F M DD NT+ + F D +K+IN +
Sbjct: 327 LKFLMENAKAEAITDAEAENFAKTEEFVAGFEKAMDDDFNTADAVAAIF-DLVKYINTTT 385
Query: 106 --KQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAEND 163
+ K+ L + L+K+ VLGL+ + K+ E+ + D
Sbjct: 386 DAESSKEYLQKLFDLLVKLTG-------VLGLIVD----------------KKEEILDED 422
Query: 164 VLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ LIEER A+K KDF+++D IR +L KGI L D R+ W+
Sbjct: 423 IEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREGVQWK 466
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I + RD+F+ M DDLNT+ L GA ++ N+ + L+ +E +V
Sbjct: 347 IARYRDDFHRAMDDDLNTAEAL-GAVFSLIRATNSHLSRGDSPDLAALEEASNFLRDVDR 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
++ V+G+ + L R DV LIEER A+K +DF+K+D IR
Sbjct: 406 IMGVIGI--------------DEDQLDR------DVEALIEERNAARKARDFAKADAIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
L+ GI L D + T W+
Sbjct: 446 RLSSMGIVLEDTPQGTRWK 464
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
+++C+ +L + ++ ++ +D ++ ++ F +M+DDLNT+ +T F D +
Sbjct: 317 IKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIGKMNDDLNTADAITAIF-DLV 375
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
K N S + + + ++S+L + NE+ VL++ K E
Sbjct: 376 KLANTSVNENSSK--TFVQSILSMLNELTAVLNIAN------------------NEKAEE 415
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ + LIE R AKK+KDF+K+D+IR +L + GI + D R+ T W
Sbjct: 416 QDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQGTQW 463
>gi|325661900|ref|ZP_08150521.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471878|gb|EGC75095.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 468
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 55 DARSGSITPAAEDCIK---KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+A++G +T A + I+ K F M DD NT+ + F + +KF N + + Q
Sbjct: 333 NAKNGEMTDAEKAQIQETEKFVTAFEEAMEDDFNTADAIAAIF-ELVKFANTTADETSSQ 391
Query: 112 QL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+L+E ++ + DVLG++ +K EL D+ LIE
Sbjct: 392 AYDSALLERIVHLS-------DVLGII----------------VVKEEELLAEDIEALIE 428
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K K+F ++D+IR +L KGI L D R+ W+
Sbjct: 429 ERQAARKAKNFQRADEIRNELLEKGIILEDTREGVKWK 466
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
+++C+ +L + ++ ++ +D ++ ++ F +M+DDLNT+ +T F D +
Sbjct: 317 IKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIEKMNDDLNTADAITAIF-DLV 375
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
K N S + + + ++S+L + NE+ VL++ K E
Sbjct: 376 KLANTSVNENSSK--TFVQSILSMLNELTAVLNIAN------------------NEKAEE 415
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ + LIE R AKK+KDF+K+D+IR +L + GI + D R+ T W
Sbjct: 416 QDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQGTQW 463
>gi|302834082|ref|XP_002948604.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
gi|300266291|gb|EFJ50479.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
Length = 509
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENE 125
L E + ++DDLNT + GA L+ IN+ +K+P + + L ++
Sbjct: 373 LVSEVLSALADDLNTPAAV-GALSGPLRTINDLMTTKAGRKRPDR-----LAVLAQLHVA 426
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ VV+++LG+ P T + QL + +L+ A +L LI+ A++ KDF++SD
Sbjct: 427 MGVVMELLGMEPNSGTKQQ--PQL-EGSLEGAAAGLEQLLQLIQ----ARQAKDFARSDA 479
Query: 186 IRADLTRKGIALMDVRKETIWRP 208
IR +L +GI L+D K T WRP
Sbjct: 480 IRLELASRGILLLDTPKGTTWRP 502
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 13/135 (9%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F MSDD NT+ + F + +K +N + K+ + Q ++ S L+ + +L
Sbjct: 348 ERFNAAMSDDFNTAEAIAVLF-EIIKELNRAVKEENEAQATIFYSTLR------HLTHIL 400
Query: 134 GLLPEGSTYSEVLQQLK-DKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L+ +V + LK D ++ L+E ++ LI++R AKKNKDF+ +D IR L
Sbjct: 401 ALVQ-----YDVDEFLKSDIGQEQLGLSEAEIEDLIQQRVDAKKNKDFANADAIRQSLLD 455
Query: 193 KGIALMDVRKETIWR 207
+G+ L D R+ T+WR
Sbjct: 456 QGVVLEDTRQGTVWR 470
>gi|331085695|ref|ZP_08334778.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406618|gb|EGG86123.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 468
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 55 DARSGSITPAAEDCIK---KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+A++G +T A + I+ K F M DD NT+ + F + +KF N + + Q
Sbjct: 333 NAKNGEMTDAEKVQIQETEKFVTAFEEAMEDDFNTADAIAAIF-ELVKFANTTADETSSQ 391
Query: 112 QL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+L+E ++ + DVLG++ +K EL D+ LIE
Sbjct: 392 AYDSALLERIVHLS-------DVLGII----------------VVKEEELLAEDIEALIE 428
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K K+F ++D+IR +L KGI L D R+ W+
Sbjct: 429 ERQAARKAKNFQRADEIRNELLEKGIILEDTREGVKWK 466
>gi|302671187|ref|YP_003831147.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
gi|302395660|gb|ADL34565.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
Length = 474
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 36/163 (22%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF-INNSKKQ 107
+S +ED G++ AA++ K + F +S+DLNTS +T D LK IN++ K
Sbjct: 342 VSELKED---GAVDTAAKE---KFEENFRDAVSNDLNTSMAIT-VLYDVLKADINDATK- 393
Query: 108 PKQQQLSLIESLLKIENEVKVVLDVLG---LLPEGSTYSEVLQQLKDKALKRAELAENDV 164
L+L+ES K+ + LD+LG + EG + L++ +
Sbjct: 394 -----LALVESFDKV-----LSLDLLGHAKAVSEGPSVDPELEKF--------------I 429
Query: 165 LHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L IE RA AKK KDF+ +D IRA+L KG+ + D R+ W+
Sbjct: 430 LDAIERRANAKKAKDFATADAIRAELLEKGVEIKDTREGVKWQ 472
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAA-------EDCIKKLRDEFYTRMSDDLNTSHILTGA 93
LQD + LS F E + S AA + L + F M DD NT+ + G
Sbjct: 308 NLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATLENVFREAMDDDFNTAAAI-GH 366
Query: 94 FLDALKFINN----SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQL 149
DA++ IN + +++++ + +L ++ VL + P + L+Q+
Sbjct: 367 LFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLGGVLGLFVSDP-----AAWLKQM 421
Query: 150 KDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L E+D+ I +R A+KNKDF+++D+IR +L KGI L+D + T W+
Sbjct: 422 NLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAAKGIQLLDGPQGTAWK 479
>gi|375091832|ref|ZP_09738120.1| cysteine-tRNA ligase [Helcococcus kunzii ATCC 51366]
gi|374562719|gb|EHR34046.1| cysteine-tRNA ligase [Helcococcus kunzii ATCC 51366]
Length = 463
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
IT E I + F M DD NT++ L+ F D K+IN + + + +SL
Sbjct: 339 ITEDIEKEINTFVERFERSMDDDFNTANALSTLF-DFAKYINTNFDENSSR-----DSLE 392
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
KI+ + +L VLG+ E+ ++++ LIEER A+KNKDF
Sbjct: 393 KIKEVFEDLLKVLGIKF------------------NKEILDDEINKLIEERQVARKNKDF 434
Query: 181 SKSDQIRADLTRKGIALMDVRKETIW 206
K+D+IR L KGI L D +W
Sbjct: 435 KKADEIRDSLLEKGIRLKDTSTGVVW 460
>gi|166031083|ref|ZP_02233912.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
27755]
gi|166028930|gb|EDR47687.1| cysteine--tRNA ligase [Dorea formicigenerans ATCC 27755]
Length = 468
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F + +++ N + K + E L KI++ + + DVLGL
Sbjct: 357 FEDAMDDDFNTADAVAAIF-ELVRYSNTNADAEKTK-----EYLGKIKDLIVKLADVLGL 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ E K+ E+ D+ LIEER A+K KDF+++D IR +L KGI
Sbjct: 411 IVE----------------KKEEILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGI 454
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 455 ILKDTREGVQWK 466
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIK--------KLRDEFYTRMSDDLNTSHILTG 92
LQD E + F E R A +D K + EF + M DD NT+ L G
Sbjct: 311 ALQDAEGRMEYFYETLRKVDERVAGKDFGKGPLHGEPARFLTEFESAMDDDFNTAGAL-G 369
Query: 93 AFLDALKFINNSKKQPKQQQLSLI-ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKD 151
A F+N +P + L+ +L + +V+ VLGL + + ++ +
Sbjct: 370 ALSGLFGFMNELTDKPPVKDKPLVGRTLQALREQVRETSRVLGLFEDDPGAWLLRRRDRA 429
Query: 152 KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCVP 211
+ ++AE V L+ ER A+ KDF+K+DQ+R L G+ +MD T W+ P
Sbjct: 430 VRERGIDVAE--VERLLAERTAARAAKDFAKADQVRGALKTLGVDIMDTPAGTSWKVAAP 487
Query: 212 V 212
Sbjct: 488 A 488
>gi|346307951|ref|ZP_08850079.1| cysteinyl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
gi|345904306|gb|EGX74054.1| cysteinyl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
Length = 468
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F + +++ N + K + E L KI++ + + DVLGL
Sbjct: 357 FEDAMDDDFNTADAVAAIF-ELVRYSNTNADAKKTK-----EYLGKIKDLIVKLADVLGL 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ E K+ E+ D+ LIEER A+K KDF+++D IR +L KGI
Sbjct: 411 IVE----------------KKEEILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGI 454
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 455 ILKDTREGVQWK 466
>gi|257067131|ref|YP_003153387.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
gi|256799011|gb|ACV29666.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
Length = 472
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
E+ +K +D+F M DDLNT+ +T F D KF+N K L++ K+ E
Sbjct: 350 ENNLKDFKDKFIEVMDDDLNTADAITVLF-DIAKFVNT--KLDSSSSKDLVDKTYKLYKE 406
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ + LGLL + K A++ E + LI +R+ AKK KDF+ +D+
Sbjct: 407 L---FESLGLLAKK---------------KEADVDEEKIEELIAKRSEAKKAKDFATADK 448
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR +L+ GI + D R+ W
Sbjct: 449 IRDELSSMGITIKDTREGVKW 469
>gi|408370907|ref|ZP_11168680.1| cysteinyl-tRNA ligase [Galbibacter sp. ck-I2-15]
gi|407743675|gb|EKF55249.1| cysteinyl-tRNA ligase [Galbibacter sp. ck-I2-15]
Length = 494
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIE 117
++ +++ + K R + Y M+DD N S IL +A+K +N + K Q Q L+L++
Sbjct: 360 VSSSSDFDVAKWRQQCYQAMNDDFN-SPILIAHLFEAVKQVNLIKDKKAQITQDDLNLLQ 418
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+K + DVLGL+ E ++L EL LI+ RA A+ N
Sbjct: 419 KTMK-----GFIFDVLGLVDESIAQDSSTERLNGTI----EL-------LIQLRAEARAN 462
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
+DFS SD+IR +L G+AL D ++ T +
Sbjct: 463 RDFSTSDKIRDELAALGVALKDAKEGTTF 491
>gi|149280305|ref|ZP_01886427.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
gi|149228994|gb|EDM34391.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
Length = 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 28/147 (19%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
I P AE+C+K + D+F S ++ +A++ IN + + +E L
Sbjct: 364 IRPIAENCVKAMNDDF---------NSPVVIAELFEAVRIINTVYDGKGRISAASLEELK 414
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL-IEERATAKKNKD 179
K+ N+ V ++ GL E S+ E+ N VL + I+ R TAK+NKD
Sbjct: 415 KLMNDF--VFEIFGLKDEDSSNVEL----------------NSVLDMVIDLRKTAKENKD 456
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIW 206
++ SD+IR L GI L D ++ T W
Sbjct: 457 YATSDKIRLGLQSMGIQLKDSKEGTTW 483
>gi|210608929|ref|ZP_03288066.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
gi|210152846|gb|EEA83852.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
Length = 476
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
K+ + F T M DD NT+ + F + +KF N + + E L + + + +
Sbjct: 359 KEFVEGFETAMEDDFNTADAIASIF-ELVKFANTTATAESSK-----EYLKGLHDLIVKL 412
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLGL+ E K EL D+ LIEER A+K K+F ++D+IR +
Sbjct: 413 ADVLGLIVE----------------KEEELLAEDIEKLIEERQAARKEKNFKRADEIRNE 456
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D R+ W+
Sbjct: 457 LLEKGIILEDTREGVKWK 474
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKK-- 106
+S F + IT AE + D+F T M DD NT L F + I + +
Sbjct: 325 ISRFNAGKKGVDITKEAEKMKETFMDKFQTAMDDDFNTPEALAAMF----EVIRETNRLL 380
Query: 107 QPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK-RAELAENDVL 165
K ++S +++ KV+LDVLG +++ +K + ++E ++
Sbjct: 381 GSKPNKISFPALQEAVQDVFKVILDVLG----------IVKYTPEKWFRINLSISEEELR 430
Query: 166 HLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
I++RA AKK+K+F +D IR +L ++GI L+D TI+R
Sbjct: 431 QKIQDRADAKKDKNFELADSIRQELKQQGIELLDTIDGTIYR 472
>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
Length = 468
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 29/158 (18%)
Query: 55 DARSGSITPAAEDCIKKLR---DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+A+ +T A ++ K + D F M DD NT+ ++ F + +K+IN S
Sbjct: 333 NAKVQEMTSAEKEAFTKTQEYIDSFERAMDDDFNTADAISSVF-ELVKYINTSADGESSA 391
Query: 112 QL--SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ L++ L+K+ DVLG++ E K E+ D+ LIE
Sbjct: 392 EYLQDLLDLLVKL-------TDVLGIIVE----------------KDEEMLAEDIEALIE 428
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K K+F+++D+IR +L +GI L D R+ W+
Sbjct: 429 ERQAARKAKNFARADEIRDELLSRGIVLEDTREGVKWK 466
>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
Length = 469
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEVKVVLDV 132
+F M DD NT+ L F + +KF N + + ++ + L E L K+ DV
Sbjct: 357 KFEAAMDDDFNTADALAAIF-ELVKFANTNVDENSSREFAGGLYEELFKLS-------DV 408
Query: 133 LGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
LGL K K+ E+ + ++ LI+ER A+K KDF ++D+IR +L +
Sbjct: 409 LGL----------------KIEKKEEILDKEIEDLIQERQAARKAKDFQRADEIRDELLK 452
Query: 193 KGIALMDVRKETIWR 207
KGI L D R+ W+
Sbjct: 453 KGIILKDTREGVKWQ 467
>gi|226324505|ref|ZP_03800023.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
gi|225206953|gb|EEG89307.1| cysteine--tRNA ligase [Coprococcus comes ATCC 27758]
Length = 259
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIESLLKIENEVKVVLD 131
+EF M DD NT+ + F + +K+ N + + K+ L++ ++K+ D
Sbjct: 143 EEFEKAMDDDFNTADAIAAIF-ELVKYANTTATAESSKEYLRGLLDRIVKLG-------D 194
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
VLGL+ + K+ EL + D+ LIEER A+K KDF+++D IR +L
Sbjct: 195 VLGLILD----------------KKEELLDADIEKLIEERQAARKAKDFARADAIRDELL 238
Query: 192 RKGIALMDVRKETIWRP 208
KGI L D R+ W+
Sbjct: 239 EKGIILKDTREGVQWKK 255
>gi|415711724|ref|ZP_11464378.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 55152]
gi|388057840|gb|EIK80653.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 55152]
Length = 526
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L ++F M+DD+N S L F +++ + + Q + I++L+K +V
Sbjct: 379 NLPEDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQNQNENQSNGIKNLIKTCVLQV 438
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL-----HLIEERATAKKNKDFS 181
+ +LD LGL P + Q+ +D AE+ L + +E+RA A+ KDF+
Sbjct: 439 RAMLDTLGLDPYAPQWRSNAQKSQDLGANNGASAEHKALESLIANQLEQRAIARAAKDFA 498
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR LT G+ + D + + W
Sbjct: 499 RADAIRDSLTAAGVVIEDCAQGSSWH 524
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F M DD NT+ + F + K +N + K+ +Q + S L+ + ++L
Sbjct: 348 ERFNAAMCDDFNTAEAMAVLF-ELAKELNRALKEENAEQAKVFYSTLR------HLTNIL 400
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ + L+ D + L+E+++ LI++R AKK KDF+K+D IR +L +
Sbjct: 401 GLVQH--NVDDFLR--SDIGQEALGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQ 456
Query: 194 GIALMDVRKETIWR 207
G+ L D R+ T+WR
Sbjct: 457 GVVLEDTRQGTLWR 470
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F M DD NT+ + F + K +N + K+ +Q + S L+ + ++L
Sbjct: 348 ERFNAAMCDDFNTAEAMAVLF-ELAKELNRALKEENAEQAKVFYSTLR------HLTNIL 400
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ + L+ D + L+E+++ LI++R AKK KDF+K+D IR +L +
Sbjct: 401 GLVQH--NVDDFLR--SDIGQEALGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQ 456
Query: 194 GIALMDVRKETIWR 207
G+ L D R+ T+WR
Sbjct: 457 GVVLEDTRQGTLWR 470
>gi|398336660|ref|ZP_10521365.1| cysteinyl-tRNA ligase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 470
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + DA++ S + +
Sbjct: 290 PKSIRFLLISSHYRSKLNFSTDRIAEASSN-IRKIQNCLDRLLDLEPDAKADSSFVFSTE 348
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + +F ++DDLN S L F +++K IN ++ K +Q++ I+ L +
Sbjct: 349 SVLHWKKDFEESLADDLNVSKALAVVF-ESIKQINSVMDADKADSKQRMEYIQILAYYDR 407
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ G+L S +L ++++ LIEER TA+KNKDF++SD
Sbjct: 408 -------IFGVLDFSS---------------EKDLIDSEIDSLIEERQTARKNKDFARSD 445
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 446 AIRDQLLAQGILIEDTKDGIRWR 468
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
L+ AL QE A +G + A + I+ L DEF M DD NT+ + GA
Sbjct: 317 LERLYTALQAAQERAAAGPLDAAGQALAAEIQALADEFEAGMDDDFNTARAI-GALFGLA 375
Query: 99 KFINNSKKQPKQ-QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
+ N +P + L+E + E+ L +L + P +E + + +
Sbjct: 376 RLGNKLAAEPDGPAKGPLLELCARRLRELGGRLGLLRIDP-----AEFFRGAAGQTATQG 430
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ D+ LI +R A+K+K+F+++D+IR L G+ L D + T WR
Sbjct: 431 GVGAADIEALIAQRNQARKDKNFAEADRIRDQLKAMGVTLQDSPQGTTWR 480
>gi|331090783|ref|ZP_08339630.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330399891|gb|EGG79550.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 468
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 26/130 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINN--SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
M DD NT+ + F D +KF N S + K+ +L + ++K+ DVLGL+
Sbjct: 361 MEDDFNTADAIASIF-DLVKFANTTTSAQSSKEYLQTLYDLIVKLS-------DVLGLIV 412
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
E K E+ D+ LIEER A+K ++F ++D+IR +L +KGI L
Sbjct: 413 E----------------KEEEMLAEDIEALIEERQAARKERNFQRADEIRDELLKKGIIL 456
Query: 198 MDVRKETIWR 207
D R+ W+
Sbjct: 457 EDTREGVKWK 466
>gi|357012836|ref|ZP_09077835.1| cysteinyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 465
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+++C AL + A +G + P ++ + +F ++M+DD NT +T F + +
Sbjct: 319 IENCLSALKHRLKSAEAGEVDPEIAAAVRNAQQQFESKMNDDFNTPDAITAVF----ELV 374
Query: 102 NNSKKQPKQQQLS--LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
N + ++Q++ +E LLK + + + VLG+L A + +L
Sbjct: 375 NAANPYINREQVTAPTLELLLK---QFEAMDQVLGIL----------------APEAEDL 415
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ ++ LI ER A++ K+++++D+IR LT +GI L D + WR
Sbjct: 416 LDEEIEQLIVERTEARQAKNWARADEIRNLLTERGIVLEDTAQGIRWR 463
>gi|427384642|ref|ZP_18881147.1| cysteinyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
gi|425727903|gb|EKU90762.1| cysteinyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
Length = 491
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L+ DA +G ITP+A + K +R+ Y M+DDLNT I+ D
Sbjct: 334 LQAAEKGLARLM-DAVNGLEKITPSATSSVDVKSVRENCYEAMNDDLNTP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ INN + L ++ + D+LGL E + E ++ A
Sbjct: 392 ARMINNIIAGNDTITAEDLKDLKDTFHL-----FCFDILGLKEENDSNEE-----REVAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+E+R AK NKD++ SDQIR +LT G A+ D + W+
Sbjct: 442 GKV------VDMLLEQRMKAKANKDWATSDQIRDELTALGFAIKDTKDGCEWK 488
>gi|194468084|ref|ZP_03074070.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
gi|194452937|gb|EDX41835.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
Length = 470
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N +Q
Sbjct: 331 LTYREQDADEGDVQ-GVTDRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYANVYAQQ- 387
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
L I+++ K E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 388 DNVNLGAIQAIKK---ELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+KNKDF++SD+IR +L ++GI L D + T ++
Sbjct: 430 EERNVARKNKDFARSDEIRDNLKKQGIILEDTPQGTRYK 468
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 31/143 (21%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIE 123
+++ + F +M+DDLNT+ +T F D +KF N +S K QQ L ++
Sbjct: 347 LQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML------- 398
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
NE+ VL++ DKA + ++A+ + LIE+R AKK+KDF+K+
Sbjct: 399 NELTAVLNIA----------------MDKADEDVDVAK--IEELIEQRNIAKKSKDFAKA 440
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR +L + GI + D R+ W
Sbjct: 441 DEIRDELKQMGIEIKDTRQGVQW 463
>gi|253579512|ref|ZP_04856781.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849013|gb|EES76974.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 469
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKI 122
A++ +KK F M DD NT+ L F + +KF N + + + +L+++++K+
Sbjct: 351 AQEFVKK----FEEAMDDDFNTADALAAIF-ELVKFANTNVSEASSAEFAGTLLDTMVKL 405
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
DVLGL KA+K E+ + ++ LI ER A+K K+F++
Sbjct: 406 -------CDVLGL----------------KAVKTEEILDKEIEDLIAERQEARKAKNFAR 442
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D+IR +L KGI L D R+ W+
Sbjct: 443 ADEIRDELLAKGIILKDTREGVKWK 467
>gi|399924308|ref|ZP_10781666.1| cysteinyl-tRNA synthetase [Peptoniphilus rhinitidis 1-13]
Length = 465
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 33/139 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIENEVKV 128
++F M DDLNT+ +T F D +K IN N+ K+ L L++ L +
Sbjct: 353 EKFENAMEDDLNTADAITAIF-DLIKDINLNLDENNSKEMLNNTLELLKKLTR------- 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VLG++ R EL+ +D+ LI+ER A+KNKDF+++D+IR
Sbjct: 405 ---VLGIMEN----------------DREELS-HDIDKLIKERNDARKNKDFARADEIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
+L GI + D R T W+
Sbjct: 445 NLKEMGIEIEDTRSGTTWK 463
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE-VK 127
++ L D F M DDLNT+ + G DA + IN + K + +L + + +K
Sbjct: 412 VQGLPDRFVEAMDDDLNTARAI-GYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSIK 470
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ VLGL E Q +++ +++ L ++ LI +R A+ +KD+ K+D+IR
Sbjct: 471 DLGYVLGLFQENPDV--YFLQDREREIRKRGLEPAEIELLIADRWAARNDKDWHKADEIR 528
Query: 188 ADLTRKGIALMDVRKETIWR 207
LT KGI L D T W+
Sbjct: 529 QLLTEKGIVLKDTPTGTTWK 548
>gi|297587609|ref|ZP_06946253.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
gi|297574298|gb|EFH93018.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
Length = 462
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 22/143 (15%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
++D I+ R++F M DD+NTS ++ F D +K+IN K + +++ K+
Sbjct: 338 GSDDNIQSFREKFEQAMDDDINTSDAISVLF-DFIKYIN--KNYDENTSKNILTEAKKLM 394
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
+++ VL +L + SE+ LIE+R A+K KDF K+
Sbjct: 395 DDISYVLGILFKEEDDDLDSEIED-------------------LIEQRNAARKEKDFKKA 435
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR L GI L D R IW
Sbjct: 436 DEIRDKLLSMGIVLKDTRDGVIW 458
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 40 ITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTR----MSDDLNTSHILTGAFL 95
L++ + ALS F ++ + ++ L F R M DD NT+ + F
Sbjct: 311 FALKEAKTALSRFYHSFKAYQ-QMYGQKTVETLEQGFVKRFNAAMRDDFNTAETMAVLF- 368
Query: 96 DALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ K +N + K+ +Q +++ S L+ + ++LGL+ +V + LK +
Sbjct: 369 ELNKELNRAVKEETAEQATVLYSTLR------YLTNILGLVQH-----DVDEFLKSDIGQ 417
Query: 156 RA-ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A L++ ++ + I++R AKK KDF+++D IR L +G+ L D R+ TIWR
Sbjct: 418 EALSLSDTEIENFIQQRVDAKKAKDFAQADAIRQSLLDQGVVLEDTRQGTIWR 470
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F M DD NT+ + F + K +N + K+ +Q + S L+ + ++L
Sbjct: 348 ERFNAAMCDDFNTAEAMAVLF-ELAKELNRALKEENAEQAKVFYSTLR------HLTNIL 400
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ + L+ D + L+E+++ LI++R AKK KDF+K+D IR +L +
Sbjct: 401 GLVQH--NVDDFLR--SDIGQEALGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLDQ 456
Query: 194 GIALMDVRKETIWR 207
G+ L D R+ T+WR
Sbjct: 457 GVVLEDTRQGTLWR 470
>gi|417925515|ref|ZP_12568934.1| cysteine--tRNA ligase [Finegoldia magna SY403409CC001050417]
gi|341591141|gb|EGS34349.1| cysteine--tRNA ligase [Finegoldia magna SY403409CC001050417]
Length = 462
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D IK R++F M DD+NT+ ++ F D +K+IN + + +
Sbjct: 340 DDNIKTFREKFEQAMDDDINTADAISVLF-DFIKYINKNYDENTSKN------------- 385
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
++LD L+ + S +L + D L ++++ LIE+R A+K KDF K+D+
Sbjct: 386 --ILLDAKKLMDDISYVLGILFKEDDDDL------DSEIEELIEQRNAARKEKDFKKADE 437
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GI L D R IW
Sbjct: 438 IRDKLLSMGIVLKDTRDGVIW 458
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE- 125
+ IK ++F + ++DDLNT+ + G+ K +NN K ++ + E LK+ +
Sbjct: 352 ETIKNFENDFISALADDLNTARAI-GSLFSLEKALNNLLKLCARK---VAEDHLKLAKKG 407
Query: 126 ----VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
K+ +LG+L E +++ + +AL L +++ LI+ER A+K K+F
Sbjct: 408 KTLATKLAGSLLGILEESP--EAFIERKRSQALLAKGLDRDEIERLIKEREEARKAKNFE 465
Query: 182 KSDQIRADLTRKGIALMDVRKETIW 206
K+D IR DL +KGI + D T W
Sbjct: 466 KADAIRDDLAQKGIIIRDTPWGTFW 490
>gi|169824112|ref|YP_001691723.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
gi|229558634|sp|B0S0W3.1|SYC_FINM2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167830917|dbj|BAG07833.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
Length = 462
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D IK R++F M DD+NT+ ++ F D +K+IN + + +
Sbjct: 340 DDNIKTFREKFEQAMDDDINTADAISVLF-DFIKYINKNYDENTSKN------------- 385
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
++LD L+ + S +L + D L ++++ LIE+R A+K KDF K+D+
Sbjct: 386 --ILLDAKKLMDDISYVLGILFKEDDDDL------DSEIEELIEQRNAARKEKDFKKADE 437
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GI L D R IW
Sbjct: 438 IRDKLLSMGIVLKDTRDGVIW 458
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 15/142 (10%)
Query: 66 EDCIKKLRDEFYTR-MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+D I E Y + M DD NT + D ++ +N +K S ++ +
Sbjct: 330 DDYIASSYTERYQQAMDDDFNTP-VAISVLFDLVRELNKAKA-------SAADNAPILAK 381
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
E+ V+ ++LGLL + Y LK+ L ++E ++ LI ER A+K+K+F++SD
Sbjct: 382 ELSVLAELLGLLGQDPEYF-----LKNSVLNNG-ISEAEIETLIAERIQARKDKNFARSD 435
Query: 185 QIRADLTRKGIALMDVRKETIW 206
+IR +L+ +GI L+D R+ T W
Sbjct: 436 EIRDELSEQGITLLDSREGTSW 457
>gi|325681889|ref|ZP_08161407.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
gi|324978533|gb|EGC15482.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
Length = 478
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N
Sbjct: 339 LTYREQDADEGDVQEVT-DRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYAN---VYA 393
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+Q +SL ++ I+ E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 394 QQDNVSL-GAIQAIKKELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 437
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+KNKDF++SD+IR +L ++GI L D + T ++
Sbjct: 438 EERNIARKNKDFARSDEIRDNLKKQGIILEDTPQGTRYK 476
>gi|423335822|ref|ZP_17313593.1| cysteinyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
gi|337729045|emb|CCC04168.1| cysteinyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
Length = 470
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N
Sbjct: 331 LTYREQDADEGDVQEVT-DRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYAN---VYA 385
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+Q +SL ++ I+ E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 386 QQDNVSL-GAIQAIKKELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+KNKDF++SD+IR +L ++GI L D + T ++
Sbjct: 430 EERNIARKNKDFARSDEIRDNLKKQGIILEDTPQGTRYK 468
>gi|148543540|ref|YP_001270910.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
gi|184152946|ref|YP_001841287.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
gi|227363504|ref|ZP_03847624.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
gi|189082068|sp|A5VI99.1|SYC_LACRD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558714|sp|B2G5S5.1|SYC_LACRJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148530574|gb|ABQ82573.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
gi|183224290|dbj|BAG24807.1| cysteinyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
gi|227071441|gb|EEI09744.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
Length = 470
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N
Sbjct: 331 LTYREQDADEGDVQEVT-DRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYAN---VYA 385
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+Q +SL ++ I+ E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 386 QQDNVSL-GAIQAIKKELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+KNKDF++SD+IR +L ++GI L D + T ++
Sbjct: 430 EERNIARKNKDFARSDEIRDNLKKQGIILEDTPQGTRYK 468
>gi|227545183|ref|ZP_03975232.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|338203862|ref|YP_004650007.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
gi|227184829|gb|EEI64900.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|336449102|gb|AEI57717.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
Length = 478
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N
Sbjct: 339 LTYREQDADEGDVQEVT-DRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYAN---VYA 393
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+Q +SL ++ I+ E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 394 QQDNVSL-GAIQAIKKELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 437
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+KNKDF++SD+IR +L ++GI L D + T ++
Sbjct: 438 EERNIARKNKDFARSDEIRDNLKKQGIILEDTPQGTRYK 476
>gi|159484322|ref|XP_001700207.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
gi|158272523|gb|EDO98322.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
Length = 637
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 39/170 (22%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENE 125
L E + ++DDLNT + GA L+ IN+ +K+P + + L ++
Sbjct: 468 LLSEVLSALADDLNTPAAV-GALSAPLRTINDLLTTKAGRKRPDR-----LAVLAQLHCA 521
Query: 126 VKVVLDVLGLLPE---------------------------GSTYSEVLQQLKDKALKRAE 158
+ V+ +LG+ E + ++LQ+L+ AL R +
Sbjct: 522 MCRVMQLLGMELELEAGARAEAAGASVGVAAGAASGLAASAAALEQLLQELRALALVRLD 581
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRP 208
+ E V I+ER A+ KDF++SD IR DL KG+ L+D + T WRP
Sbjct: 582 MTEEAVQAAIQERTEARAAKDFARSDAIRVDLAAKGVLLLDTPEGTSWRP 631
>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
gi|336431208|ref|ZP_08611062.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153796726|gb|EDN79146.1| cysteine--tRNA ligase [Ruminococcus gnavus ATCC 29149]
gi|336020130|gb|EGN49847.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 468
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F D +KFIN + ++ +++LL +++ + DVLG+
Sbjct: 357 FEKAMDDDFNTADAIAAVF-DLVKFINTNTDGESSKEY--LQNLL---SQLVALTDVLGI 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ E K E+ +D+ LI ER A+K ++F+++D+IR +L KGI
Sbjct: 411 IVE----------------KEQEMLADDIEALIAERQAARKERNFARADEIRDELLAKGI 454
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 455 ILEDTREGVKWK 466
>gi|270294934|ref|ZP_06201135.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
gi|317477932|ref|ZP_07937115.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
gi|270274181|gb|EFA20042.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
gi|316905846|gb|EFV27617.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
Length = 491
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 41 TLQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLD 96
LQ E L+ DA G ITPAA I K LR + Y M+DDLN+ I+ D
Sbjct: 333 ALQAAEKGLARLM-DAVHGLDKITPAATSTIDVKSLRAKCYEAMNDDLNSP-IVIAHLFD 390
Query: 97 ALKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
K +NN + L ++ + D+LGL + ++ E ++ A
Sbjct: 391 GAKMVNNILAGNDSITAEDLKELKETFHL-----FCFDILGLQEDNASNEE-----REAA 440
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER+ AK NKD++ SD+IR +LT G + D + + W+
Sbjct: 441 FGKV------VDMLLEERSKAKANKDWATSDKIRNELTALGFEIKDGKDGSEWK 488
>gi|303234834|ref|ZP_07321459.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
gi|302493952|gb|EFL53733.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
Length = 462
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D IK R++F M DD+NT+ ++ F D +K+IN + + +
Sbjct: 340 DDNIKTFREKFEQAMDDDINTADAISVLF-DFIKYINKNYDENTSKN------------- 385
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
++LD L+ + S +L + D L ++++ LIE+R A+K KDF K+D+
Sbjct: 386 --ILLDAKKLMDDISYVLGILFKEDDDDL------DSEIEDLIEQRNAARKEKDFKKADE 437
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GI L D R IW
Sbjct: 438 IRDKLLSMGIVLKDTRDGVIW 458
>gi|302380049|ref|ZP_07268526.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
gi|302312122|gb|EFK94126.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
Length = 448
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D IK R++F M DD+NT+ ++ F D +K+IN + + +
Sbjct: 326 DDNIKTFREKFEQAMDDDINTADAISVLF-DFIKYINKNYDENTSKN------------- 371
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
++LD L+ + S +L + D L ++++ LIE+R A+K KDF K+D+
Sbjct: 372 --ILLDAKKLMDDISYVLGILFKEDDDDL------DSEIEDLIEQRNAARKEKDFKKADE 423
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GI L D R IW
Sbjct: 424 IRDKLLSMGIVLKDTRDGVIW 444
>gi|295108532|emb|CBL22485.1| cysteinyl-tRNA synthetase [Ruminococcus obeum A2-162]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 32/158 (20%)
Query: 58 SGSITPAAEDCIKKLRDE--FYTR----MSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+ S+ A+ED K +++E F T+ M DD NT+ L F + +KF N + ++
Sbjct: 334 AASVQEASEDEKKMMQEEAAFVTKFEEAMDDDFNTADALAAVF-ELVKFGNTNVQEGSSA 392
Query: 112 QLS--LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ + +E + K+ DVLGL+ + K+ E+ + ++ +LI
Sbjct: 393 EFAAHTLEVMTKL-------CDVLGLILD----------------KKEEILDEEIENLIA 429
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K KDF+++D+IR L KGI L D R+ W+
Sbjct: 430 ERQAARKAKDFARADEIRGLLLDKGIELKDTREGVKWK 467
>gi|398813150|ref|ZP_10571852.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398039311|gb|EJL32449.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 468
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +LR+ F M DD+NT++ +T F + + + Q + E EV+
Sbjct: 349 IGELRERFIAEMDDDINTANAITVIF----DIVKEANLYLRHQNVG--------ETEVRA 396
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+D+L E+ + L + + EL ++++ LIEER A+K +DF++SD+IR
Sbjct: 397 YMDLL---------VELTEVLGLEIAEEQELLDSEIDALIEERTEARKARDFARSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + WR
Sbjct: 448 LLAAKGIVLEDTPQGVRWR 466
>gi|423304259|ref|ZP_17282258.1| cysteinyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
gi|423310627|ref|ZP_17288611.1| cysteinyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
gi|392681798|gb|EIY75155.1| cysteinyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
gi|392684845|gb|EIY78165.1| cysteinyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
Length = 491
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L+ DA G ITPAA I K LR + Y M+DDLN+ I+ D
Sbjct: 334 LQAAEKGLARLM-DAVHGLDKITPAATSTIDVKSLRAKCYEAMNDDLNSP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
K +NN + L ++ + D+LGL + ++ E ++ A
Sbjct: 392 AKMVNNILAGNDSITAEDLKELKETFHL-----FCFDILGLQEDNASKEE-----REAAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER+ AK NKD++ SD+IR +LT G + D + + W+
Sbjct: 442 GKV------VDMLLEERSKAKANKDWATSDKIRNELTALGFEIKDGKDGSEWK 488
>gi|298206748|ref|YP_003714927.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
gi|83849379|gb|EAP87247.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
Length = 495
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENE 125
++ ++ YT M+DD N S +L DA+K IN ++K ++ LS+++ L
Sbjct: 368 VETWKNSCYTAMNDDFN-SPVLIAKLFDAVKLINTVNDNKDTITKENLSILKETLN---- 422
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
V DVLGL E + + DK EL LI+ RA A+ NKDF+ SD+
Sbjct: 423 -AFVFDVLGL--ENANSNTATDSSSDKLSGTLEL-------LIQLRAEARANKDFATSDK 472
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR +L + I L D + T++
Sbjct: 473 IRDELAKLDIELKDGKDGTVFN 494
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-NSKKQPKQQQLSLIE 117
G + A D + ++ M DDLNT+ ++ F + +K+ N N ++ + + L+
Sbjct: 335 GEVDKAVADEMDAFVKKYEAAMDDDLNTADAISVIF-ELVKYANVNVTEESTKATVELVL 393
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
N V + D+LG++ E K+ E+ ++D+ LIEER A+K
Sbjct: 394 ------NTVTKLCDILGIITE----------------KKKEILDSDIEALIEERQAARKA 431
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+F+++D+IR L+ GI L D R+ W+
Sbjct: 432 KNFARADEIRDQLSDMGIILEDTREGVKWK 461
>gi|160888583|ref|ZP_02069586.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
gi|156861897|gb|EDO55328.1| cysteine--tRNA ligase [Bacteroides uniformis ATCC 8492]
Length = 491
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L+ DA G ITPAA I K LR + Y M+DDLN+ I+ D
Sbjct: 334 LQAAEKGLARLM-DAVHGLDKITPAATSTIDVKTLRAKCYEAMNDDLNSP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
K +NN + L ++ + D+LGL + ++ E ++ A
Sbjct: 392 AKMVNNILAGNDSITAEDLKELKETFHL-----FCFDILGLQEDNASNEE-----REAAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER+ AK NKD++ SD+IR +LT G + D + + W+
Sbjct: 442 GKV------VDMLLEERSKAKANKDWATSDKIRNELTALGFEIKDGKDGSEWK 488
>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
Length = 464
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 60 SITPAAEDCIKKLRDE--FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
+TP A D + + + F RM DD N + + A L AL N +++ +Q +
Sbjct: 325 GVTPLASDAVARTAHDTLFVKRMDDDFNCAGAM--ATLHALAGEMNQQRRDGDEQAAAAS 382
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+ + + + VLGLL + E+ Q + + EL+ + +I+ RA A+K
Sbjct: 383 ATVLVR-----LGSVLGLLQQDP---ELFFQ--SDSGQGNELSAGQIETMIQSRADARKT 432
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+DF+ +DQIR +L +G+ L D R+ T WR
Sbjct: 433 RDFAGADQIRDELLARGVILDDSREGTSWR 462
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
+R F M DD NT+ L G DA++ +N + + +L E+ V+
Sbjct: 357 IRSRFLEAMDDDFNTAQAL-GVLFDAVRLLNRIVEHNPSGNADM-SALAWTRRELTVLGG 414
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+L LL + +LQ L+ K + +++ LI RA A+K +DF+K+D IR L
Sbjct: 415 ILNLLQQDP--QTMLQNLRQKT-DALTIPPSEIERLIAARAEARKQRDFTKADAIRQQLA 471
Query: 192 RKGIALMDVRKETIWR 207
G+ L D + +WR
Sbjct: 472 EAGVLLEDTPQGAVWR 487
>gi|153813240|ref|ZP_01965908.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
gi|149830653|gb|EDM85744.1| cysteine--tRNA ligase [Ruminococcus obeum ATCC 29174]
Length = 469
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 32/158 (20%)
Query: 58 SGSITPAAEDCIKKLRDE------FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+ ++ A ED K +++E F M DD NT+ L F + +KF N + ++ +
Sbjct: 334 AATVQEATEDEKKLMQEEAAFVTKFEESMDDDFNTADALAAVF-ELVKFANTNVQEGSSK 392
Query: 112 QLS--LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ + +E + K+ DVLGL E K+ E+ + ++ +LI
Sbjct: 393 EFAGHTLEVMTKL-------CDVLGLTLE----------------KKEEILDEEIENLIA 429
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K KDF+++D+IR L KGI L D R+ W+
Sbjct: 430 ERQAARKAKDFARADEIRGLLLDKGIELKDTREGVKWK 467
>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
Length = 420
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
Query: 59 GSITPAAEDCIKKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
G +T A + +++L R +F M DDLNT+ +T A + KFIN + + ++ +
Sbjct: 289 GEMTDAEKALVEELDGFRKKFVEVMDDDLNTADAIT-AIFELSKFINLNVDENSSKEFA- 346
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
E L NE+ VL+++ + S +EV LI++R AK
Sbjct: 347 -EKCLAEFNELTGVLNIVNKEKDNSVDAEVEA-------------------LIQQRTDAK 386
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KNKDF+K+D IR L GI L D R+ W+
Sbjct: 387 KNKDFAKADAIRQQLLDMGIVLEDTRQGVKWK 418
>gi|77745319|gb|ABB02560.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri]
Length = 470
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ ++DA G + D +++ +F T M DD+N + + + + +K+ N
Sbjct: 331 LTYREQDADEGDVQEVT-DRLEQFHHQFITAMDDDINVQNGIATVY-ELVKYAN---VYA 385
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
Q +SL ++ I+ E+ ++ + G+ E S Q+ D+ +K+ LI
Sbjct: 386 HQDNVSL-GAIQAIKKELVELMSIFGVKLEASD-----NQINDEKIKQ----------LI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKET 204
EER A+KNKDF++SD+IR +L ++GI L D + T
Sbjct: 430 EERNIARKNKDFARSDEIRHNLKKQGIILEDTPQGT 465
>gi|421114103|ref|ZP_15574533.1| cysteine--tRNA ligase [Leptospira santarosai str. JET]
gi|410800524|gb|EKS06712.1| cysteine--tRNA ligase [Leptospira santarosai str. JET]
Length = 474
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + AR+ I P+
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNC---LDRLSDVARNVKIDPSYSF 346
Query: 68 CIK---KLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLK 121
K + EF ++DDLN S L F ++LK IN +SKK ++ L+ E ++
Sbjct: 347 HDKLTLGWKKEFEESLADDLNVSKALAVVF-ESLKTINTFLDSKKDRVEEILA--EEFIQ 403
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
I V DVL P + L ++++ LI+ER TA+KNKDF+
Sbjct: 404 ILAYYDRVFDVLDFEP-----------------PKDLLMDSEIDSLIKERQTARKNKDFA 446
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+SD+IR L +GI + D + WR
Sbjct: 447 RSDEIRDRLLAQGILIEDTKDGIRWR 472
>gi|359686320|ref|ZP_09256321.1| cysteinyl-tRNA synthetase [Leptospira santarosai str. 2000030832]
Length = 474
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + AR+ I P+
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNC---LDRLSDVARNVKIDPSYSF 346
Query: 68 CIK---KLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLK 121
K + EF ++DDLN S L F ++LK IN +SKK ++ L+ E ++
Sbjct: 347 HDKLTLGWKKEFEESLADDLNVSKALAVVF-ESLKTINTFLDSKKDRVEEILA--EEFIQ 403
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
I V DVL P + L ++++ LI+ER TA+KNKDF+
Sbjct: 404 ILAYYDRVFDVLDFEP-----------------PKDLLMDSEIDSLIKERQTARKNKDFA 446
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+SD+IR L +GI + D + WR
Sbjct: 447 RSDEIRDRLLAQGILIEDTKDGIRWR 472
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 31/143 (21%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIE 123
+++ + F +M+DDLNT+ +T F D +KF N +S K QQ L ++
Sbjct: 347 LQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML------- 398
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
NE+ VL++ DKA + ++A+ + LIE+R AKK+KDF+K+
Sbjct: 399 NELTGVLNIA----------------MDKADEDVDVAK--IEELIEQRNIAKKSKDFAKA 440
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR +L + GI + D R+ W
Sbjct: 441 DEIRDELKQMGIEIKDTRQGVQW 463
>gi|410448347|ref|ZP_11302428.1| cysteine--tRNA ligase [Leptospira sp. Fiocruz LV3954]
gi|418744455|ref|ZP_13300811.1| cysteine--tRNA ligase [Leptospira santarosai str. CBC379]
gi|418752166|ref|ZP_13308438.1| cysteine--tRNA ligase [Leptospira santarosai str. MOR084]
gi|422005602|ref|ZP_16352778.1| cysteinyl-tRNA synthetase [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409967895|gb|EKO35720.1| cysteine--tRNA ligase [Leptospira santarosai str. MOR084]
gi|410017820|gb|EKO79871.1| cysteine--tRNA ligase [Leptospira sp. Fiocruz LV3954]
gi|410794906|gb|EKR92806.1| cysteine--tRNA ligase [Leptospira santarosai str. CBC379]
gi|417255704|gb|EKT85165.1| cysteinyl-tRNA synthetase [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456874696|gb|EMF89968.1| cysteine--tRNA ligase [Leptospira santarosai str. ST188]
Length = 474
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 33/206 (16%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + AR+ I P+
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNC---LDRLSDVARNVKIDPSYSF 346
Query: 68 CIK---KLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLK 121
K + EF ++DDLN S L F ++LK IN +SKK ++ L+ E ++
Sbjct: 347 HDKLTLGWKKEFEESLADDLNVSKALAVVF-ESLKTINTFLDSKKDRVEEILA--EEFIQ 403
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
I V DVL P + L ++++ LI+ER TA+KNKDF+
Sbjct: 404 ILAYYDRVFDVLDFEP-----------------PKDLLMDSEIDSLIKERQTARKNKDFA 446
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+SD+IR L +GI + D + WR
Sbjct: 447 RSDEIRDRLLAQGILIEDTKDGIRWR 472
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 42 LQDCEVA---LSPFQEDARSGSI-TPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDA 97
L +C A L P + A SI T ++ + F M +D NT+ G F D
Sbjct: 319 LYECVAAVDRLDPQKSGANVASIFTDNDRQLLESMESRFQQAMDNDFNTAQA-QGIFFDT 377
Query: 98 LKFINN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+K IN + P S +E L K N ++ + D++G+L E + L K+K +
Sbjct: 378 VKTINRICRALPAVPSASDVEFLKKCANNLRKLADIMGILREDA--ESFLAAGKNKMISE 435
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
L N + LI ER + K++++SD+IR L + I L D T W
Sbjct: 436 GGLDVNAIEALIAERNQCRSAKNWARSDEIRDLLLAQNIELKDGPNGTTW 485
>gi|291550109|emb|CBL26371.1| cysteinyl-tRNA synthetase [Ruminococcus torques L2-14]
Length = 468
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 26/134 (19%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIENEVKVVLDVL 133
F + M DD NT+ + F D +KFIN + ++ +L + L+++ +VL
Sbjct: 357 FESAMDDDFNTADAIAAVF-DLVKFINTMTDEDSSKEYLENLFDRLVRL-------TEVL 408
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ + K E+ ++D+ LI ER A+K K+F+++D+IR +L K
Sbjct: 409 GIIVD----------------KEDEILDSDIEALIAERQAARKEKNFARADEIRDELLAK 452
Query: 194 GIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 453 GIVLKDTREGVQWK 466
>gi|388257084|ref|ZP_10134264.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387939288|gb|EIK45839.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 466
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M+DD NT L G F D ++ +NN+K P + + ++K + +LG+
Sbjct: 346 FVEAMNDDFNTRVALAGMF-DLVRDLNNAKSNP--------DLACDLAGQLKALGLILGV 396
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L E EV Q A ++A ++V LI ER AKK+K ++++D+IR +L G+
Sbjct: 397 LQENP---EVFLQ----AGGSDQIAADNVERLIAERIQAKKDKQYARADEIRKELLAAGV 449
Query: 196 ALMDVRKETI-WR 207
L D R T WR
Sbjct: 450 VLEDARDGTTQWR 462
>gi|325299474|ref|YP_004259391.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
gi|324319027|gb|ADY36918.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
Length = 492
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 56 ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQ 112
A + I PA LR++ Y M+DDLNT +++ F D ++ IN + K
Sbjct: 358 ASTSGIEPAG------LREKCYEAMNDDLNTPIVISHLF-DGIRMINTVLDKKATISAAD 410
Query: 113 LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
L ++S+ + D+LGL EG + R E V L+EER
Sbjct: 411 LEELKSVFHL-----FAFDILGLKAEGENNA-----------AREEAFSKVVDMLLEERM 454
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR L G + D + WR
Sbjct: 455 KAKANKDWATSDKIRDSLAALGFEVKDTKDGFTWR 489
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
S S+ P ++ ++K R+ ++ M D+ NT+ + G D ++ IN S +
Sbjct: 338 SDSVDPELQENLEKFRENWFRAMCDNFNTADAI-GNLFDLVRAINKSIDAN-----GWTK 391
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+L E+K V+G+L + E L+ K A L ++ LIEER + +
Sbjct: 392 TLSDTLEEIKKFSSVVGILEKDP--DEYLEGRKSSANLEG-LTPEEIEVLIEERKQTRTD 448
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KD++++D+IR +L KGI L D TIW+
Sbjct: 449 KDWARADEIRDELDAKGIVLEDKAGGTIWK 478
>gi|372210003|ref|ZP_09497805.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium S85]
Length = 492
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 77 YTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
Y M+DD NT +L +++K+IN K+Q Q L L + L + + DVL
Sbjct: 376 YDAMNDDFNTP-VLIAQLFESVKYINLLKEGKEQLTAQDLDLFTNTLHV-----FIFDVL 429
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL E ++ Q +K E V LI+ R A+ NKD+S SDQIR +L
Sbjct: 430 GLFTENTS------QENNKL-------EGVVNMLIDMRKVARDNKDWSLSDQIRDELKAL 476
Query: 194 GIALMDVRKETIW 206
GI L D + ET +
Sbjct: 477 GIVLKDGKGETTF 489
>gi|424780852|ref|ZP_18207719.1| Cysteinyl-tRNA synthetase [Catellicoccus marimammalium M35/04/3]
gi|422842553|gb|EKU27004.1| Cysteinyl-tRNA synthetase [Catellicoccus marimammalium M35/04/3]
Length = 467
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ LR F M DD N ++ +T A + +K++N K+ ++ L ++L
Sbjct: 349 MEGLRAAFINAMDDDFNVANGMT-AIYELVKWVNQYVKEEPTSKVVLGDALALFAE---- 403
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLGL K +L + ++ LIE+R A+KNKDF+ SD IR
Sbjct: 404 WYDVLGL-----------------TWKEEDLLDEEIEALIEKRNEARKNKDFATSDAIRD 446
Query: 189 DLTRKGIALMDVRKETIWR 207
+L KGI L D R+ T WR
Sbjct: 447 ELKEKGILLDDTRQGTKWR 465
>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404487458|ref|YP_006711564.1| cysteinyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|61216165|sp|Q65PC8.1|SYC_BACLD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346452|gb|AAU39086.1| cysteinyl-tRNA ligase CysS [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 467
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGS-ITPAAEDCI 69
P +R +L + + + + S+ + N + A S Q +S + +T + +
Sbjct: 286 PQVLRFFMLSVHYRHPINYSV-ELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWL 344
Query: 70 KKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+K+ R F T M DD NT++ ++ F D K N Q K +I++ +++ +E+
Sbjct: 345 EKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHAN-YYLQEKNTAEHVIQAFIQLFDEI 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VLG +LK EL + D+ LIE+R A++N+DF+ SDQI
Sbjct: 403 ---CSVLGF-----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L I L D + T W+
Sbjct: 443 RDQLKSMNIILEDTPQGTRWK 463
>gi|294791389|ref|ZP_06756546.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
gi|294457860|gb|EFG26214.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
Length = 589
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 71 KLRDEFYTRMSDDLNTSHILTG---------AFLDALKFINNSKKQPKQQQLSLIESLLK 121
L +F T M++D N S L F++ + N ++ +Q S + SL K
Sbjct: 425 NLPSDFVTAMNEDFNVSPALAAIYTSIRRGNGFINEENWQNANESHAQQTDRSSLSSLKK 484
Query: 122 IENEVKVVLDVLGL-------LPEGS---TYSEVLQQLKDKALKRA------ELAENDVL 165
I +V+ +LDV GL LP G YS V Q+ + E E V
Sbjct: 485 ILLQVRSMLDVFGLDPLDPQWLPGGDGFPAYSPVGQKSSAAPAGSSSAVSALEALEALVS 544
Query: 166 HLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ R A+KNKDF+++D IR L + GI + D + T W+
Sbjct: 545 DQLDRRQEARKNKDFAQADAIRDSLNQAGITIEDSPQGTSWK 586
>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 463
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGS-ITPAAEDCI 69
P +R +L + + + + S+ + N + A S Q +S + +T + +
Sbjct: 282 PQVLRFFMLSVHYRHPINYSV-ELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWL 340
Query: 70 KKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+K+ R F T M DD NT++ ++ F D K N Q K +I++ +++ +E+
Sbjct: 341 EKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHAN-YYLQEKNTAEHVIQAFIQLFDEI 398
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VLG +LK EL + D+ LIE+R A++N+DF+ SDQI
Sbjct: 399 ---CSVLGF-----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQI 438
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L I L D + T W+
Sbjct: 439 RDQLKSMNIILEDTPQGTRWK 459
>gi|433447291|ref|ZP_20410888.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|431999955|gb|ELK20862.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I++LR+EF M DD NT++ + A L L N K ++I+ L+ + +
Sbjct: 347 IEELRNEFIREMDDDFNTANGI--AVLFELAKQANVYLMEKHTSQAVIQKFLR---QFEQ 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ DVLGL +L++ EL + ++ LI++R A+KN+DF+ +D+IR
Sbjct: 402 LFDVLGL-----------------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
+L K I L D + T WR
Sbjct: 445 ELKAKNIILEDTPQGTRWR 463
>gi|423680487|ref|ZP_17655326.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|383441593|gb|EID49302.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 467
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGS-ITPAAEDCI 69
P +R +L + + + + S+ + N + A S Q +S + +T + +
Sbjct: 286 PQVLRFFMLSVHYRHPINYSV-ELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWL 344
Query: 70 KKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+K+ R F T M DD NT++ ++ F D K N Q K +I++ +++ +E+
Sbjct: 345 EKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHAN-YYLQEKNTAEHVIQAFIQLFDEI 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VLG +LK EL + D+ LIE+R A++N+DF+ SDQI
Sbjct: 403 ---CSVLGF-----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L I L D + T W+
Sbjct: 443 RDQLKSMNIILEDTPQGTRWK 463
>gi|410671243|ref|YP_006923614.1| cysteinyl-tRNA synthetase [Methanolobus psychrophilus R15]
gi|409170371|gb|AFV24246.1| cysteinyl-tRNA synthetase [Methanolobus psychrophilus R15]
Length = 478
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 11 PAFVRTLLLDIFWLNEL-FASIP-QYTGNETITLQDCEVALSPFQEDARSGSITPAAEDC 68
P +R +L+ + N + F+ + Q G + + V + E+A D
Sbjct: 291 PEVIRFFILNTHYRNTIDFSKMHLQEAGRAYERIANTIVNVRYAIENAPEEDNDSGLSDE 350
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN--SKKQPKQQQLSLIESLLKIENEV 126
I + RD+F M +D NT L F+ + K +N S P + L E++L +E+
Sbjct: 351 ISEARDQFTISMDEDFNTREALANLFIFSRK-VNAIISGSSPGRPAL---EAILDFFSEI 406
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VL V G G T + R L++ D+ +I++R A+++KD+ +SD I
Sbjct: 407 DEVLGVFGKDISGVT----------EGTSRG-LSDKDIDAMIQQREEARRSKDWQRSDAI 455
Query: 187 RADLTRKGIALMDVRKETIWR 207
R +L KGI + D ++ WR
Sbjct: 456 RDELKEKGIVIEDGKEGVRWR 476
>gi|404416859|ref|ZP_10998672.1| cysteinyl-tRNA ligase [Staphylococcus arlettae CVD059]
gi|403490747|gb|EJY96279.1| cysteinyl-tRNA ligase [Staphylococcus arlettae CVD059]
Length = 466
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I + +F T M+DD NT++ +T A+ D +K N + L+++E ++ +
Sbjct: 345 IDSILTQFETVMNDDFNTANAIT-AWYDLVKLANKFVLE-NTTSLAVLERFKEV---FHI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ EG++ E+L + DV LI ER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGVPLEGASTDELLDE--------------DVEALIAERDAARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
DL + I L D
Sbjct: 446 DLKAQNIILED 456
>gi|380022109|ref|XP_003694896.1| PREDICTED: cysteine--tRNA ligase-like, partial [Apis florea]
Length = 732
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL + E LS D S A E+ IKK + F T M DD N + L A D L
Sbjct: 341 TLNNLEYRLS----DQTSSVQAAALEEAIKKTKTAFITAMDDDFNVQNAL-AAIYDLLPV 395
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N + + E+L +++ + L V G+ T + +
Sbjct: 396 VNANIAAENADK----EALKEVKQLLHDWLAVFGIETTQLTATTAAED------------ 439
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E+++ LI+ER A+KNKD++KSDQ+RA L GI + D + T W
Sbjct: 440 EDEITALIKEREQARKNKDWAKSDQLRAQLKEMGITVEDTPQGTRW 485
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAE-----DCIKKLRDEFYTRMSDDLNTSHILTGAFL 95
+L+ A + QE + ++ P AE D +++LR F+ MSDD NTS L ++L
Sbjct: 316 SLERLRTAQNNLQEIQQVITVGPDAESLALRDKVEELRKGFFDAMSDDFNTS--LAISYL 373
Query: 96 DALK-----FINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLK 150
AL + N K+ L+E + K E+ V+ +L P + +
Sbjct: 374 FALAKEINVYHNAIISGAKKPDGKLVEQIDKAWKEMIGVIGILENQPAANGEGGAVSN-- 431
Query: 151 DKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ AE+A IEER A+K +DF+K+D IR +L KGI L D + W+
Sbjct: 432 ----EEAEIAAR-----IEERQAARKARDFAKADAIRDELAAKGIILEDTPQGVRWK 479
>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|187629805|sp|A9KSM5.1|SYC_CLOPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 470
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 26/139 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
IKK D M DD NT+ ++ F + +K N S +E + K+ + +
Sbjct: 356 IKKFED----AMDDDFNTADAISSIF-EMVKLSNTYVTVE-----SSVEMIQKVLSNITT 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
D+LGL E K+AE+ + ++ LI +R +A+K KDF+KSD+IR
Sbjct: 406 FCDILGLETE----------------KKAEILDEEIEQLIADRQSARKAKDFAKSDEIRN 449
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D R+ W+
Sbjct: 450 LLLEKGIILEDTREGVKWK 468
>gi|423507884|ref|ZP_17484451.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449086756|ref|YP_007419197.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|402442671|gb|EJV74592.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020513|gb|AGE75676.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 465
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
I+K + F M+DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 IEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 61 ITPA--AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+ PA AE KL EF M+DD NT + F A K+ KQ+ L
Sbjct: 326 LVPADQAEPAESKLEAEFMAAMNDDFNTPQAMAVLFELA-------KEVNKQKSPGLAAL 378
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
L K+ N++ GLL E + S Q D ++L + + LI ERA A+K K
Sbjct: 379 LKKLANQI-------GLL-EQTAESFFKSQPSD-----SDLTDEMIEALIVERAEARKAK 425
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
DFS+SD+IR +L +GI L+D + T WR
Sbjct: 426 DFSRSDEIRDELLAQGIELLDSAEGTSWR 454
>gi|421132578|ref|ZP_15592744.1| cysteine--tRNA ligase [Leptospira kirschneri str. 2008720114]
gi|410355961|gb|EKP03336.1| cysteine--tRNA ligase [Leptospira kirschneri str. 2008720114]
Length = 471
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D ++ P +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDIKTDFYFPFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L
Sbjct: 350 LMQTWKKEFEESLADDLNISKALAVVF-ESVKQINSFLDTNQSDSKQRIEYIQIL----- 403
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ Y+ +L L ++ K +L ++++ LIEER A+KNKDF++SD
Sbjct: 404 ---------------AYYNRILGVLNFESKK--DLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 440
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
I+K + F M+DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 322 IEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 374
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 375 ETLFDILGL-----------------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQI 417
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 418 RDDLKERNIILEDTAQGTRWK 438
>gi|398339383|ref|ZP_10524086.1| cysteinyl-tRNA ligase [Leptospira kirschneri serovar Bim str. 1051]
Length = 471
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D ++ P +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDIKTDFYFPFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L
Sbjct: 350 LMQTWKKEFEESLADDLNISKALAVVF-ESVKQINSFLDTNQSDSKQRIEYIQIL----- 403
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ Y+ +L L ++ K +L ++++ LIEER A+KNKDF++SD
Sbjct: 404 ---------------AYYNRILGVLNFESKK--DLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|423223410|ref|ZP_17209879.1| cysteinyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
gi|392638946|gb|EIY32777.1| cysteinyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
Length = 491
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 41 TLQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLD 96
LQ E L+ DA +G ITP+A + K +R++ Y M+DDLNT I+ D
Sbjct: 333 ALQAAEKGLTRMM-DAVNGLEKITPSATSSVDVKAVREKCYEAMNDDLNTP-IVIAHLFD 390
Query: 97 ALKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
+ INN + L ++ + D+LGL E + E ++ A
Sbjct: 391 GARMINNIIAGNDTITAEDLKYLKETFHL-----FCFDILGLKEENDSNEE-----REVA 440
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER AK NKD++ SD+IR +LT G + D + W+
Sbjct: 441 FGKV------VDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKDGCEWK 488
>gi|418678573|ref|ZP_13239847.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418687779|ref|ZP_13248938.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418742109|ref|ZP_13298482.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|400321763|gb|EJO69623.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410738103|gb|EKQ82842.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410750467|gb|EKR07447.1| cysteine--tRNA ligase [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 471
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D ++ P +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDIKTDFYFPFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L
Sbjct: 350 LMQTWKKEFEESLADDLNISKALAVVF-ESVKQINSFLDTNQSDSKQRIEYIQIL----- 403
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ Y+ +L L ++ K +L ++++ LIEER A+KNKDF++SD
Sbjct: 404 ---------------AYYNRILGVLNFESKK--DLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|298253308|ref|ZP_06977100.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532703|gb|EFH71589.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 588
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
+L ++F M+DD+N S + F I++ K Q Q ++ L+ + +V
Sbjct: 441 ELPEDFTRAMNDDINVSGAIAEIFTTIRQGNTLIDDCSKDSSQAQSESVQKLIYLAVLQV 500
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI-----EERATAKKNKDFS 181
+ +LD LGL P T++ Q + E E+ L + + RA A+K KDF+
Sbjct: 501 RAMLDTLGLDPYAQTWASNDNQSPAEGSNGKENKEHSALDSLITLQLKARADARKAKDFA 560
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+D IR L GI ++D +E+ W
Sbjct: 561 TADAIRDALNNAGIVIVDTSQESSWH 586
>gi|350566003|ref|ZP_08934716.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
gi|348663210|gb|EGY79810.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
Length = 464
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 28/134 (20%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIENEVKVVLDVL 133
F T M +D+NT+ +T F + +K IN + +++ S ++LLK+ VL
Sbjct: 355 FETSMENDINTADAITAVF-NIVKKINTGLNENSNKKIVSSTFDTLLKL-------TKVL 406
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+L + Q D ++R LIEER A+KNKDF+++D+IR +L
Sbjct: 407 GILE--------MSQETDIEVER----------LIEERVQARKNKDFNRADEIRQELLDM 448
Query: 194 GIALMDVRKETIWR 207
G+ + D R T W+
Sbjct: 449 GVVIEDTRAGTKWK 462
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 31/143 (21%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIE 123
+++ + F +M+DDLNT+ +T F D +KF N +S K QQ L ++
Sbjct: 347 LQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML------- 398
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
NE+ VL++ DKA + ++A+ + LIE+R AKK+KDF+K+
Sbjct: 399 NELTGVLNIA----------------MDKADEDVDVAK--IEELIEQRNIAKKSKDFAKA 440
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D IR +L + GI + D R+ W
Sbjct: 441 DTIRDELKQMGIEIKDTRQGVQW 463
>gi|417779916|ref|ZP_12427692.1| cysteine--tRNA ligase [Leptospira weilii str. 2006001853]
gi|410779885|gb|EKR64488.1| cysteine--tRNA ligase [Leptospira weilii str. 2006001853]
Length = 472
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D + SI
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDMKIDSIFTFTLP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + EF ++DDLN S L F ++LK IN ++ + +Q++ I+ L +
Sbjct: 350 LAQTWKKEFEESLADDLNISKALAVVF-ESLKQINSLLDTNQTDSKQRVEFIQILAYYDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ G+L S+ + L ++++ LIEER TA+KNKDF++SD
Sbjct: 409 -------IFGILNFESS--------------KDPLIDSEIDSLIEERQTARKNKDFARSD 447
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 448 AIRDQLLAQGILIEDTKDGVRWR 470
>gi|374603237|ref|ZP_09676219.1| cysteinyl-tRNA synthetase [Paenibacillus dendritiformis C454]
gi|374391106|gb|EHQ62446.1| cysteinyl-tRNA synthetase [Paenibacillus dendritiformis C454]
Length = 472
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQ--Q 111
EDA A + + + D F +M DD NT+ +T F D + +N++ +Q Q +
Sbjct: 334 EDAAEREPDEALQQKLADILDTFDAKMQDDFNTADAITAVF-DWVNLVNSTMQQGSQDDR 392
Query: 112 QLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEER 171
Q + +++LL + ++ + +VLGL+PE + +++ LI+ER
Sbjct: 393 QTANLQALL---DAIEAMNNVLGLVPEQEEEDLLDEEIN---------------RLIQER 434
Query: 172 ATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K K+++++D+IR LT +GI L D + WR
Sbjct: 435 TDARKAKNWARADEIRDMLTAQGIILEDTPQGIRWR 470
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQLSLIESLLKIENE 125
+ L F M DD NT+ L G D+++ +N + +E L E
Sbjct: 350 VAGLLPRFREAMDDDFNTAQAL-GTLFDSIRTLNRLLAEGGGSSSASRADLEQLRAAVTE 408
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ VL + + P S+ L + + + E++ ++ LI ERA A+KNKDF +SD+
Sbjct: 409 IGAVLGLFRIKP-----SDWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDE 463
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L + I L+D + T W+
Sbjct: 464 IRDYLLSRDIQLVDTPQGTAWK 485
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| cysteine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 24/150 (16%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-NSKKQPKQQQLSLIE 117
G + + D + ++ M DDLNT+ ++ F + +K+ N N ++ + + L+
Sbjct: 335 GDVDKSVADEMDAFVKKYEDAMDDDLNTADAISVIF-ELVKYANVNVTEESSKATVELVL 393
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
N ++ + D+LG++ E K+ E+ ++D+ LIEER A+K
Sbjct: 394 ------NTIEKLCDILGIITE----------------KKEEILDSDIEALIEERQAARKA 431
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+F+++D+IR L+ GI L D R+ W+
Sbjct: 432 KNFARADEIRDQLSSMGIILEDTREGVKWK 461
>gi|421097643|ref|ZP_15558323.1| cysteine--tRNA ligase [Leptospira borgpetersenii str. 200901122]
gi|410799193|gb|EKS01273.1| cysteine--tRNA ligase [Leptospira borgpetersenii str. 200901122]
Length = 472
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D + SI
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLFDLEPDVKIDSIFTFTLS 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + EF ++DDLN S L F ++LK IN ++ + +Q++ I+ L +
Sbjct: 350 LTQTWKKEFEESLADDLNISKALAVVF-ESLKQINSLLDTNRTDSKQRIEFIQILAYYDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ G+L + KD L ++ + LIEER TA+KNKDF +SD
Sbjct: 409 -------IFGILN--------FESQKD------SLIDSRIDSLIEERQTARKNKDFVRSD 447
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 448 AIRDQLLAQGILIEDTKDGIRWR 470
>gi|399545485|ref|YP_006558793.1| cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
gi|399160817|gb|AFP31380.1| Cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
Length = 480
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 60 SITPAAEDCIKKLRDE--FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
+TP A D + + + F RM DD N + + A L AL N +++ +Q +
Sbjct: 339 GVTPLASDAVARTSHDTLFDKRMDDDFNCAGAM--AILHALAGEMNQQRRDGDEQAAAAS 396
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+ + + + +LGLL + E+ Q + + EL+ + +I+ RA A+K
Sbjct: 397 ATVLVR-----LGSILGLLQQDP---ELFFQSDSGSGEGNELSAEQIETMIQSRADARKT 448
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+DF+ +DQIR +L + + L D R+ T WR
Sbjct: 449 RDFAGADQIRDELLTRRVILDDSREGTSWR 478
>gi|406708519|ref|YP_006758871.1| cysteine--tRNA ligase [alpha proteobacterium HIMB59]
gi|406654295|gb|AFS49694.1| cysteine--tRNA ligase [alpha proteobacterium HIMB59]
Length = 444
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 58 SGSITPAAEDCIKK-----LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ 112
S +I D +KK L +F + DDLNT A + + N+ KK P+ ++
Sbjct: 314 SSNIVSKWRDFVKKSSNNHLDQDFLKALEDDLNTPQ----ALMRLQQIFNDLKKTPEDEE 369
Query: 113 LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
LS N L +LGL+P Q+++ K L +D+ ++I RA
Sbjct: 370 LS---------NFFNNGLSILGLVPH-------FQEIELK------LDNDDIENMIARRA 407
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NK+F +DQIR +L GI L D + T W+
Sbjct: 408 DAKSNKNFELADQIRDELLDNGIILEDTKSGTKWK 442
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 14 VRTLLLDIFWLNEL--FASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIKK 71
VR +L+ + + L A + + N +++ + LS E ++ +T + +K+
Sbjct: 290 VRFFMLNAHYRSPLNFSAELIESAKNSLERIKNAKATLSFALEHSQIADLTEEEKALLKE 349
Query: 72 LRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
L D F+ M DD NT+ ++ F + +KF N K+ Q +E++LK+ NE+
Sbjct: 350 LDDFKARFHEHMEDDFNTADAISIIF-ELVKFANTYAKEGASQ--PFVEAVLKLFNEL-- 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
D+LGL+ + K L++ ++ IE+R AKK +DF+++D+IR
Sbjct: 405 -TDILGLIYD------------RKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRD 451
Query: 189 DLTRKGIALMDVRK 202
L +G+ + D R+
Sbjct: 452 FLKDQGVLIEDTRE 465
>gi|255530399|ref|YP_003090771.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
gi|255343383|gb|ACU02709.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
Length = 486
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIE 117
I P A +CI+ + D+F S ++ +A + IN + K + +L ++
Sbjct: 364 IDPIASNCIRAMNDDF---------NSPVVIAELFEATRIINIVYDGKGKISVAELGKLK 414
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL-IEERATAKK 176
L+K V D+ GL KD+ EL NDVL + I+ R AK+
Sbjct: 415 KLVK-----DFVFDIFGL--------------KDEEASNTEL--NDVLEMMIDIRKAAKE 453
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIW 206
NKD++ SD+IR L GI L D ++ T W
Sbjct: 454 NKDYATSDKIRVGLQSMGIQLKDSKEGTTW 483
>gi|423578058|ref|ZP_17554177.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401203638|gb|EJR10474.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
Length = 465
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
+KK + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LKKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKNRNIILEDTAQGTRWK 463
>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
10507]
gi|225038413|gb|EEG48659.1| cysteine--tRNA ligase [Blautia hydrogenotrophica DSM 10507]
Length = 484
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTR----MSDDLNTSHILTGAFLDALKFINNSKKQPK 109
+ A+ I+P ++ + + + + ++ M DD NT+ L F + +KF N +
Sbjct: 347 DGAKKIEISPQEQESLNEAKKIYVSKFEEAMDDDFNTADALAAVF-ELVKFANTQINEES 405
Query: 110 QQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ ++++ +K + DVLGL+ E K E+ + D+ LI
Sbjct: 406 SKGY-----VVEVYAILKQLCDVLGLIIE----------------KEKEVLDEDIERLIA 444
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ER A+K K+F+K+D+IR LT GI L D R+ W+
Sbjct: 445 ERQAARKMKNFAKADEIRDQLTNMGIILEDTREGVKWK 482
>gi|423240574|ref|ZP_17221688.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
gi|392643536|gb|EIY37285.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
Length = 493
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITP+A+ + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPSAQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATLSAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LG+ E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYEILGIKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + WR
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWR 490
>gi|212692228|ref|ZP_03300356.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
gi|265752921|ref|ZP_06088490.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
gi|212665105|gb|EEB25677.1| cysteine--tRNA ligase [Bacteroides dorei DSM 17855]
gi|263236107|gb|EEZ21602.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
Length = 493
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITP+A+ + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPSAQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATLSAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LG+ E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYEILGIKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + WR
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWR 490
>gi|423230794|ref|ZP_17217198.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
gi|423244505|ref|ZP_17225580.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
gi|392630444|gb|EIY24437.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
gi|392642079|gb|EIY35851.1| cysteinyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
Length = 493
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITP+A+ + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPSAQTTDIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATLSAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LG+ E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYEILGIKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + WR
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWR 490
>gi|315640330|ref|ZP_07895447.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
gi|315483992|gb|EFU74471.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
Length = 468
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 23/139 (16%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ KL ++F T M DD N ++ +T + + K++N +Q Q L + L +++
Sbjct: 351 LAKLEEQFITEMDDDFNAANGITVTY-ELAKWLNIYLEQSDVSQAVLAQGL----SQLTS 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L++ G+ EL + D+ LIE+R A+K++DF++SD+IR
Sbjct: 406 WLEIFGIEFTN------------------ELVDADIEQLIEQRNQARKDRDFARSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 448 QLKEQGIVLEDTAQGTRWR 466
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ + E A+ ++ A+ G I ++ + + + +F M DD NT+ ++ F + +K +
Sbjct: 322 IDELESAVFNNKKPAQKGKI----DEIVDRFKRDFEESMDDDFNTASAISNIF-ELIKGV 376
Query: 102 NNS-KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N ++ + L+ ++ ++ E ++ DVLG+L + T SE + +
Sbjct: 377 NLLLSERLNSEDLNYLK--VRFEEVKAIIRDVLGILTK--TASEWFKM-------NLSID 425
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E+++ LIEER A++NKDFSK+D IR +L KG+ L+D T +R
Sbjct: 426 ESELQKLIEEREIARRNKDFSKADAIRNELKTKGVELLDTPTGTKFR 472
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 31/159 (19%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQP 108
ED++ +D + R +F M DD+NT+ ++ F + KF+N NS K+
Sbjct: 340 EDSKMTEEEAKLQDELASFRQKFIDAMDDDVNTADAVSAIF-ELAKFMNSNITENSSKEF 398
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
Q+ L NE+ VL+++ KDK + ++ + ++ LI
Sbjct: 399 AQKALDEF-------NELTGVLNIVN---------------KDK---KEDILDEEIEKLI 433
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E+R AKKNK+F +D+IR L KGI L D R+ W+
Sbjct: 434 EQRTEAKKNKNFQLADEIRQQLLDKGIVLEDTRQGVKWK 472
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 34/170 (20%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAED---CIKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
L+DC A A++ ++T A E+ LR++F M DD NT+ ++ F + +
Sbjct: 328 LRDCLAA-------AKAEALTGAEEEELAAFDALREKFEAAMDDDFNTADAISVIF-EMV 379
Query: 99 KFIN-NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
K N ++ + ++ ++ LL +LDVLGLL E ++
Sbjct: 380 KRANITVTEESSKAYITRVKELLD------KLLDVLGLLSE----------------RKE 417
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E + V LI ER TA+K K+F+++D+IR +LT GI L D ++ W+
Sbjct: 418 ENLDARVEALIAERQTARKEKNFARADEIRNELTEMGILLEDTKEGVKWK 467
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK-QQQLSLIESLLKIENEVKVV 129
+L +F M DD NT+ + G + ++ +N K +++ L+ S+ + + +
Sbjct: 345 ELTAKFREAMDDDFNTAQAI-GYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLEL 403
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
VLG+ GS L Q + AL ++ ++ LI ER A+++KDF++SD IR +
Sbjct: 404 GKVLGMF--GSEPKAWLNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDE 461
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L+D T W+
Sbjct: 462 LAEKGILLLDGAGGTDWK 479
>gi|160893352|ref|ZP_02074139.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
gi|156865044|gb|EDO58475.1| cysteine--tRNA ligase [Clostridium sp. L2-50]
Length = 468
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 26/134 (19%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKF--INNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
F T M DDLNT+ ++ F + +K+ IN S PK+ I ++ K+ D+L
Sbjct: 357 FETAMDDDLNTADAISVIF-ELVKYTNINISNDTPKKTVDLAIRTIEKL-------CDIL 408
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E + EL ++D+ LI ER A+K K+F+++D+IR L+ K
Sbjct: 409 GIITE----------------REEELLDSDIEALINERQEARKAKNFARADEIRNMLSDK 452
Query: 194 GIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 453 GIILEDTREGVKWK 466
>gi|420155520|ref|ZP_14662380.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
gi|394759006|gb|EJF41818.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
Length = 467
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAE--DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
L +C L+ +++A G E D + R F T M DDLNT+ ++ F D +
Sbjct: 318 LYNCRDNLTFARDNAPEGLKDGEQEQIDALDSFRQRFITAMDDDLNTADAISVLF-DLAR 376
Query: 100 FINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
IN + P ++ L + LK+ E+ DVLGLL Q KD++L
Sbjct: 377 EIN-TNLIPGEKSKELYNAALKLYGELA---DVLGLL----------YQRKDQSL----- 417
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ ++ LI++R A+KNKD++ +D+IR +L + + L D + W+
Sbjct: 418 -DEEIEALIQQRTDARKNKDWATADRIRDELKARHVVLEDTPQGIKWK 464
>gi|363898043|ref|ZP_09324580.1| cysteinyl-tRNA synthetase [Oribacterium sp. ACB7]
gi|361957688|gb|EHL10995.1| cysteinyl-tRNA synthetase [Oribacterium sp. ACB7]
Length = 472
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 66 EDCIKKLRDE---FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
E+ +KK+ + F +M DDLNT+ +T F + ++ N++ + + I +
Sbjct: 344 EEALKKVEEYTALFSEKMEDDLNTADAITQIF-ELVRLANSTVNEESSKDFGSI-----M 397
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+ + V++ VLG+ E K K E E V LI +R AKKNKDF++
Sbjct: 398 KESIAVLVHVLGIRTE------------KKEEKLDERLEEKVNALIAKRQEAKKNKDFTE 445
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D+IR +L GIAL D R W+
Sbjct: 446 ADRIRDELLEMGIALKDTRNGVEWQ 470
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
+L + +VAL R S+ A E + F M DD NT + + ++
Sbjct: 308 SLNEAKVALERLYTALRQQSV--AEEWVASEYTARFEEAMQDDFNTP-VAVSVLFELVRE 364
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N +K + + +L E+K + +LGLL + Y LQ + A L
Sbjct: 365 LNKAKAEESDKAANLAA-------ELKSLASLLGLLDQVPEY--FLQN----STITAGLD 411
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E+ + LI+ER A+K+K+F++SD+IR L +GI L+D R+ T W
Sbjct: 412 ESAIQALIDERTQARKDKNFARSDEIRDQLADQGIELLDSREGTTW 457
>gi|327403405|ref|YP_004344243.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
gi|327318913|gb|AEA43405.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
Length = 517
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ L D FY M+DD N +L + +A+KFIN + +E L K
Sbjct: 392 VPALVDSFYKAMNDDFNAP-MLVASLFEAVKFINTVSEGKATISADDLEILTK--EFTGF 448
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V DVLGL E ST A A D++ ++ R +A++NKD+S SD+IR
Sbjct: 449 VFDVLGLSIEKST----------AGANEALTATMDLV--LDMRKSARENKDWSTSDKIRD 496
Query: 189 DLTRKGIALMDVRKETIW 206
L GI + D + W
Sbjct: 497 RLAEAGIVVKDGKDGVTW 514
>gi|198275421|ref|ZP_03207952.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
gi|198271757|gb|EDY96027.1| cysteine--tRNA ligase [Bacteroides plebeius DSM 17135]
Length = 493
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 42 LQDCEVALSPFQEDARS-GSITPA-AEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L E ++ ITPA A I K LR++ Y M+DDLNT +++ F DA
Sbjct: 335 LQAAEKGLERLLEGVKNLDRITPAKATSGIEPKGLREKCYEAMNDDLNTPIVISHLF-DA 393
Query: 98 LKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ IN + K + L ++S+ + V D+LGL E +
Sbjct: 394 TRMINTVIDKKAAISAEDLEELKSVFHL-----FVFDILGLKAEAENNA----------- 437
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
R E V L+E+R AK NKD++ SD+IR +L G + D + W+
Sbjct: 438 AREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDNLAALGFEVKDTKDGFTWK 490
>gi|339443047|ref|YP_004709052.1| hypothetical protein CXIVA_19830 [Clostridium sp. SY8519]
gi|338902448|dbj|BAK47950.1| hypothetical protein CXIVA_19830 [Clostridium sp. SY8519]
Length = 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 25/140 (17%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEVK 127
+K D+F M DD NT+ + F + +KF N + + + L + L+++
Sbjct: 350 RKYVDKFEASMEDDFNTADAIAAIF-EYVKFCNTHASETSSRGFADALYQRLIRL----- 403
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
D+LG+L E + E ++D+ LI+ER A+ +K+F+++D+IR
Sbjct: 404 --TDILGILVEP---------------EEEEFLDSDIEALIQERQEARASKNFARADEIR 446
Query: 188 ADLTRKGIALMDVRKETIWR 207
L +GI L D R+ W+
Sbjct: 447 DQLKERGIILKDTREGVTWQ 466
>gi|150003580|ref|YP_001298324.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
gi|187629793|sp|A6KZ38.1|SYC_BACV8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149932004|gb|ABR38702.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
Length = 493
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITPA + + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPATQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LGL E + +E ++ K + L+E+R
Sbjct: 413 EELKSMFHL-----FMYEILGLKEEAAN-NEAHEEAYGKVVDM----------LLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + W+
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWK 490
>gi|332881450|ref|ZP_08449099.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357045526|ref|ZP_09107161.1| cysteine--tRNA ligase [Paraprevotella clara YIT 11840]
gi|332680448|gb|EGJ53396.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355531388|gb|EHH00786.1| cysteine--tRNA ligase [Paraprevotella clara YIT 11840]
Length = 494
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCIK-----KLRDEFYTRMSDDLNTSHILTGAF 94
LQ E L+ E A ITP A ++ +LR + Y M+DDLN+ +++ F
Sbjct: 333 ALQASEKGLARLMEGIANLKRITPTAGGSVEMAYVDELRRKCYEAMNDDLNSPIVISHLF 392
Query: 95 LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE---GSTYSEVLQQLKD 151
DA + IN Q ++ +L ++ + D+LGL E GS E ++ D
Sbjct: 393 -DACRVINTVVDQKATMAGDVLAALTEVFH--TFAFDILGLKEETGGGSGREEAFGKVVD 449
Query: 152 KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+E+R AK NKD++ SD+IR +L G + D + W+
Sbjct: 450 M--------------LLEQRMIAKANKDWATSDKIRDNLAALGFEVKDTKDGFTWK 491
>gi|345514037|ref|ZP_08793551.1| cysteinyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
gi|229435852|gb|EEO45929.1| cysteinyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
Length = 493
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITP A+ + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPTAQTTGVEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATLSAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LGL E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYEILGLKEETAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + WR
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWR 490
>gi|402492629|ref|ZP_10839389.1| cysteinyl-tRNA ligase [Aquimarina agarilytica ZC1]
Length = 497
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQLSLIESLLKIENE 125
+ + Y M+DD N S IL +A+KFIN K Q L+++ + L
Sbjct: 372 VNSWKQRCYDAMNDDFN-SPILISYLFEAVKFINQVKEGKSNVSQADLTILSATL----- 425
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
DVLGL ++V +L D A++ LIE R A+ NK+F+ SD+
Sbjct: 426 TNFTFDVLGLQASAEASNDVTSKL-DAAIEL----------LIELRKEARINKNFALSDK 474
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR +L KG+ L D R+ T +
Sbjct: 475 IRDELAEKGVQLKDGREGTTF 495
>gi|329964460|ref|ZP_08301514.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
gi|328524860|gb|EGF51912.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
Length = 491
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS DA G ITPAA + K LR + Y M+DDLN+ I+ D
Sbjct: 334 LQAAEKGLSRLM-DAVHGLDKITPAAVSTVDVKTLRAKCYEAMNDDLNSP-IVIAHLFDG 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
K +NN ++ L E D+LGL + ++ E ++ A +
Sbjct: 392 AKMVNNILAGNDTVTTEDLKELK--ETFHTFCFDILGLKEDNASNEE-----REAAFGKV 444
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+EER AK NKD++ SD+IR +LT G + D ++ W+
Sbjct: 445 ------VDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKEGCEWK 488
>gi|440712727|ref|ZP_20893341.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SWK14]
gi|436442566|gb|ELP35688.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SWK14]
Length = 600
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 22/159 (13%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 449 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDANQLAAGAD 507
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLL---PEGSTYSEVLQQLKDKALKRAELAENDVLHL 167
+ +ESL+K + + + VLGL P S EV AEL ++ V L
Sbjct: 508 AKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEV----------DAELLDSVVHLL 557
Query: 168 IEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
I R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 558 INLRKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 596
>gi|345517222|ref|ZP_08796700.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|423313281|ref|ZP_17291217.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
gi|254833985|gb|EET14294.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|392685631|gb|EIY78946.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
Length = 493
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITPA + + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPATQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LGL E + + +++A + V L+E+R
Sbjct: 413 EELKSMFHL-----FMYEILGLKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + W+
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWK 490
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F M DD NT + F + K +N + K Q+Q ++ S L+ + ++L
Sbjct: 348 ERFNAAMCDDFNTPEAIAVLF-ELNKELNRAVKDQNQEQAAVYYSTLRH------LTNIL 400
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ E L+ D + L+E + LI++R AKK K+F+++D+IR L +
Sbjct: 401 GLVQH--NVDEFLK--SDIGQEALGLSEAQIEDLIQQRKDAKKEKNFARADEIRQSLLDQ 456
Query: 194 GIALMDVRKETIWR 207
G+ L D R+ T+WR
Sbjct: 457 GVVLEDTRQGTVWR 470
>gi|423130311|ref|ZP_17117986.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 12901]
gi|371645847|gb|EHO11368.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 12901]
Length = 492
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K R Y M+DD N S IL +A+KFIN K + + +++L+ N
Sbjct: 368 ITKWRQSCYDAMNDDFN-SPILIANLFEAVKFINLIKDNKETISATDLDTLIHSMN--AF 424
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V DVLGL + + A E E V LI R A+ NKDF+ SD IR
Sbjct: 425 VFDVLGL------------ENTETASANNEKLEGVVNMLIGMRNEARANKDFAMSDHIRD 472
Query: 189 DLTRKGIALMDVRKET 204
+L + GI L D ++ T
Sbjct: 473 ELAKIGIQLKDGKEGT 488
>gi|197301390|ref|ZP_03166471.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
29176]
gi|197299547|gb|EDY34066.1| cysteine--tRNA ligase [Ruminococcus lactaris ATCC 29176]
Length = 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIENEVKVVLD 131
+ F M DD NT+ ++ F + +K++N + ++ +L + L+++ D
Sbjct: 355 ENFEKAMDDDFNTADAISAVF-ELVKYMNTTTDGASSKEYLQNLFDCLIRL-------TD 406
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
VLG++ + K E+ +D+ LIEER A+K K+F+++D+IR +L
Sbjct: 407 VLGIIVD----------------KEDEILASDIEALIEERQAARKAKNFARADEIRDELL 450
Query: 192 RKGIALMDVRKETIWR 207
KGI L D R+ W+
Sbjct: 451 AKGIILKDTREGVQWK 466
>gi|319900445|ref|YP_004160173.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
gi|319415476|gb|ADV42587.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
Length = 491
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS DA G I PA I K LR + Y M+DDLN+ I+ D
Sbjct: 334 LQAAEKGLSRLM-DAVHGLEKIVPATTSTIDVKTLRAKCYEAMNDDLNSP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
K +NN L +E + D+LGL + ++ E ++ A
Sbjct: 392 AKMVNNILAGNDSITADDLKELEDMFHT-----FCFDILGLKEDNTSNEE-----REAAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER AK NKD++ SD+IR +LT G + D ++ W+
Sbjct: 442 GKV------VDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKEGCEWK 488
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 31/143 (21%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIE 123
+++ + F +M+DDLNT+ +T F D +KF N +S K QQ L ++
Sbjct: 347 LQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML------- 398
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
NE+ VL++ DK + ++A+ + LIE+R AKK+KDF+K+
Sbjct: 399 NELTGVLNIA----------------MDKTDEDVDVAK--IEELIEQRNIAKKSKDFAKA 440
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR +L + GI + D R+ W
Sbjct: 441 DEIRDELKQMGIEIKDTRQGVQW 463
>gi|398333603|ref|ZP_10518308.1| cysteinyl-tRNA ligase [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 472
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D + SI
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDVKIDSIFAFTFS 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + EF ++DDLN S L F ++LK IN ++ + +Q++ I+ L
Sbjct: 350 LTQAWKKEFEESLADDLNISKALAVVF-ESLKQINSLLDTNRTDSKQRIEFIQIL----- 403
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ Y+ + L ++ K L ++++ LIEER TA+KNK+F++SD
Sbjct: 404 ---------------AYYNRIFGILNFESPKNL-LIDSEIDSLIEERQTARKNKNFARSD 447
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 448 AIRDQLLAQGILIEDTKDGIRWR 470
>gi|423608085|ref|ZP_17583978.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
gi|401238768|gb|EJR45201.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
Length = 465
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
+KK + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LKKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|452944310|ref|YP_007500475.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452882728|gb|AGG15432.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 488
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQ--------PKQQQLSLIESLLK 121
K +++FY +S+D NTS + F +A+ +N +K + PK+ +E L
Sbjct: 349 KSTQEQFYKALSEDFNTSLAMAQVF-NAVAELNRAKTESFKIGYITPKE-----LEGYLF 402
Query: 122 IENEVKVVL-DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
+ N +K L D+ GLL E +T L+ L+ + ++ + LI+ R AK+NKDF
Sbjct: 403 LANSLKQTLKDIFGLLEE-NTLQNTLKTLEPAS--SVNISTEFLEILIKARNLAKENKDF 459
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWR 207
+D IR +L GI L D + TIW+
Sbjct: 460 KVADFIRDELLNYGIKLEDTKAGTIWK 486
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
+L + +VAL R + + E + + F M DD NT+ + + ++
Sbjct: 308 SLLEAKVALERLYTALRQQQVAESFEPTV--FTERFEEAMKDDFNTA-VAVSVLFELVRE 364
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N +K + + SLL E ++ + ++LGLL + Y L++ + L
Sbjct: 365 LNKAKTEDANKA-----SLLAAE--LRSLAELLGLLYQDPEYF-----LQNSTVSEG-LG 411
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E + LI+ER A+K+K+F++SD+IR +L +GI L+D R+ T W
Sbjct: 412 EVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSREGTTW 457
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
A + + EF T M DD N++ L F D +K IN Q ++ E +LK+ N
Sbjct: 341 ANKIFENFKKEFETSMDDDFNSAKALAAIF-DYIKEINRLLNQKVVKET--YEEILKLTN 397
Query: 125 EVKVVLD-VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
K +++ VLG++ + K+ ++E++++ IEER A+KNK+F +
Sbjct: 398 NFKKIVNQVLGIINKTP---------KEWFASNLPISESELIKKIEERTNARKNKNFELA 448
Query: 184 DQIRADLTRKGIALMDVRKETIWR 207
D+IR +L GI L+D T +R
Sbjct: 449 DKIRDELESLGIELLDTPTGTRYR 472
>gi|291459364|ref|ZP_06598754.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417963|gb|EFE91682.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 73 RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDV 132
R F RM DDLNT+ +T F + ++ N+S + Q ++ +L + + +L V
Sbjct: 355 RRNFNERMDDDLNTADAITAVF-ELVRIANSSVSE--QSSAAICRYML---DTIVTLLSV 408
Query: 133 LGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
LG+ E ++ E + +V LIEER A++ KDF ++D+IR L
Sbjct: 409 LGIRTE----------------RKEEKLDREVEELIEERQKAREKKDFKRADEIRDRLLS 452
Query: 193 KGIALMDVRKETIW 206
GI+L D R+ W
Sbjct: 453 MGISLKDTREGVKW 466
>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|229558625|sp|B2TIF6.1|SYC_CLOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 470
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 30/145 (20%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAF---LDALKFIN-NSKKQPKQQQLSLIESLLKI 122
+ +KK R+++ +M DD NT+ LT F D IN NS K+ + L+LI L
Sbjct: 349 NSLKKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALNLIRELGA- 407
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
LGLL Q++ +L E+++ LI++R A+KNKDF+
Sbjct: 408 ---------PLGLL----------QKITKGSL------EDEIESLIQQRQDARKNKDFAL 442
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
SD+IR DL +GI L D + W+
Sbjct: 443 SDKIRDDLKDRGIVLEDTPQGVRWK 467
>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254765181|sp|C0ZIF7.1|SYC_BREBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 468
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +LR+ F M DD+NT++ +T F D +K N + Q + E EV+
Sbjct: 349 IGELRERFIAEMDDDINTANAITVIF-DVVKEAN---LYLRHQNVG--------ETEVRA 396
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+D+L E+ + L + EL ++++ LIEER A+K ++F++SD+IR
Sbjct: 397 YMDLL---------VELTEVLGLDIAEEQELLDSEIDALIEERTEARKARNFARSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + WR
Sbjct: 448 LLAAKGIVLEDTPQGVRWR 466
>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
gi|224956650|gb|EEG37859.1| cysteine--tRNA ligase [Eubacterium hallii DSM 3353]
Length = 464
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFIN----NSKKQPKQQQLSLIESLLKIENEVK 127
L+ ++ M DD NT+ + F + +K N + K QQ L +I L
Sbjct: 350 LKAKYEAAMEDDFNTADAIAAIF-ELVKLANVTAESGSKAYAQQLLDIIVQLC------- 401
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
D+LG++ E K+ EL ++D+ LIEER A+K K+F+++D+IR
Sbjct: 402 ---DILGIITE----------------KKEELLDDDIEALIEERQAARKAKNFARADEIR 442
Query: 188 ADLTRKGIALMDVRKETIWR 207
L KGI L D R W+
Sbjct: 443 DLLADKGIILEDTRAGVKWK 462
>gi|269468022|gb|EEZ79747.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 118
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 135 LLPEGSTYSEVLQQLKDKALKRA-ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
LL + +Y +LQ D LKR +LA+ D+ I++R AK NKDF+ SDQIR +LT+
Sbjct: 43 LLQKLGSYIGILQTDADSFLKRGVDLADEDIDAKIKQRDEAKANKDFALSDQIRDELTKL 102
Query: 194 GIALMDVRKETIWR 207
GI L D T WR
Sbjct: 103 GIILEDSANGTSWR 116
>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
Length = 478
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 61 ITPAAEDCIKKLRDEFYTR-----MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
+ PAA I+ L D Y + M+DD NT L+G + + +K IN ++ L
Sbjct: 339 VEPAA---IESLSDSVYYQHFVDSMNDDFNTRIALSGMY-ELIKTINTVAVDDAEKAKKL 394
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+ E+K + ++LG+L T E LQ +DK + L+ + + LI +R AK
Sbjct: 395 VA-------ELKAMANILGVLQADPT--EFLQA-EDKTSQVVGLSIDVIETLISQRIQAK 444
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+K + ++D IR L +G+ L D R+ T WR
Sbjct: 445 KDKQYQRADDIRQQLDDQGVLLEDSREGTAWR 476
>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
Length = 420
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
+KK + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LKKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
Length = 468
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIENEVKVVLDVL 133
F M DD NT+ + F + +K+IN + + +L+ L+K+ DVL
Sbjct: 357 FEAAMDDDFNTADAVAAVF-ELVKYINTTADAHSSRAYLQALLSRLVKL-------TDVL 408
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL+ + K+ ++ E ++ LI ER A+K K+F+++D+IR L K
Sbjct: 409 GLIVD----------------KKEDMLEEEIEKLIAERQAARKEKNFARADEIRGTLLEK 452
Query: 194 GIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 453 GIILEDTREGVKWK 466
>gi|237711499|ref|ZP_04541980.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
gi|229454194|gb|EEO59915.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
Length = 493
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITP+A+ + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPSAQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATLSAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + +LG+ E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYKILGIKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + WR
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWR 490
>gi|294777611|ref|ZP_06743062.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
gi|319640202|ref|ZP_07994928.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
gi|294448679|gb|EFG17228.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
gi|317388189|gb|EFV69042.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
Length = 493
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 61 ITPAAE----DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
ITPA + + +K LR++ YT M+DDLN+ I+ D + IN + K + L
Sbjct: 354 ITPATQTTGIEGVKDLREKCYTAMNDDLNSP-IVIAHLFDGARMINTVLDKKATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++S+ + + ++LGL E + + +++A + V L+E+R
Sbjct: 413 EELKSVFHL-----FMYEILGLKEEAAN-----NEAREEAYGKV------VDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR +L G + D + W+
Sbjct: 457 AKANKDWATSDKIRDELAALGFEVKDTKDGFTWK 490
>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|229558710|sp|B4U9I4.1|SYC_HYDS0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 488
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQ--------PKQQQLSLIESLLK 121
K +++FY +S+D NTS + F +A+ +N +K + PK+ +E L
Sbjct: 349 KSTQEQFYKALSEDFNTSLAIAHIF-NAVAELNKAKTESFKIGYITPKE-----LEGYLF 402
Query: 122 IENEVKVVL-DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
+ N +K L D+ GLL E +T L+ L+ + ++ + LI+ R AK+NKDF
Sbjct: 403 LANSLKQTLKDIFGLLEE-NTLQNTLKTLEPAS--SVNISTEFLEILIKARNLAKENKDF 459
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWR 207
+D IR +L GI L D + TIW+
Sbjct: 460 KVADFIRDELLNYGIKLEDTKAGTIWK 486
>gi|440785439|ref|ZP_20962196.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218335|gb|ELP57557.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 465
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLK 121
D +K RD++ +M DD NT+ ++ F D ++ +N NS K+ + +SLI L K
Sbjct: 345 DNLKSYRDKYIEKMDDDFNTADAISVIF-DIVRDVNSNLDINSSKEIVEASISLIRELGK 403
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
LG+L + + + +L E ++ LIEER A+K K+F+
Sbjct: 404 ----------PLGILQKST---------------KVDL-EREIEKLIEERQKARKEKNFA 437
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+D+IR DL KGI L+D + W+
Sbjct: 438 LADKIRDDLKDKGIILLDTPQGVRWK 463
>gi|283782829|ref|YP_003373583.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283441414|gb|ADB13880.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 588
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
+L ++F M+DD+N S + F I++ K Q Q I+ L+ + +V
Sbjct: 441 ELPEDFTRAMNDDINVSGAIAEIFTTIRQGNTLIDDCSKDSSQAQSESIQKLIYLAVLQV 500
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI-----EERATAKKNKDFS 181
+ +LD LGL P T++ Q + E E+ L + + RA A+K KDF+
Sbjct: 501 RAMLDTLGLDPYAKTWASNNNQSPAEGSNGKESKEHSALDSLITLQLKARADARKAKDFA 560
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+D IR L GI ++D + + W
Sbjct: 561 TADAIRDALNNAGIVIVDTSQGSSWH 586
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT +AL + + +Q QQ+ E+ I ++K + VLGL
Sbjct: 344 FQQVMDDDFNTR--------EALSVLFDLARQLNQQEG---EAARNIAVQLKTLGRVLGL 392
Query: 136 LPEGSTYSEVLQQLKDKAL--KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
L EG + LK L L+++D+ LI ER AK+NKDF+++D IR LT
Sbjct: 393 L-EGDAQA----YLKSGGLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEA 447
Query: 194 GIALMDVRKETIWR 207
GI L D T WR
Sbjct: 448 GIQLEDGPAGTQWR 461
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ KL + F M DDLNT+ + F + + + K K ++ + E+L +I ++
Sbjct: 347 LNKLEEGFTGAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAA--EALGRILADL 404
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+LG+ G E L +LK L R + V L+ ER A+K KDF++SD I
Sbjct: 405 DTWSGILGVF--GRDSREFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAI 462
Query: 187 RADLTRKGIALMDVRKETIW 206
R +L G+ +MD W
Sbjct: 463 RDELAGLGVTVMDTPAGPQW 482
>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 447
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D EV L + +D ++ D F M DD NT++ +T F D K+I
Sbjct: 311 IHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAFQVAMDDDFNTANGVTVLF-DMAKWI 369
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N+ +++ + +L V G++ E EVL +
Sbjct: 370 NSGNYDET------------VKDAFEKMLQVFGIVFE----EEVLDE------------- 400
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
D+ LIEER A+ NKDF+ +D+IR +L +GI L+D R+ W
Sbjct: 401 -DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTREGVRW 444
>gi|330996564|ref|ZP_08320446.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
gi|329573120|gb|EGG54739.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
Length = 494
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 42 LQDCEVALSPFQED-ARSGSITPAAEDCIK-----KLRDEFYTRMSDDLNTSHILTGAFL 95
LQ E LS E A ITP A + +LR + Y M DDLN+ +++ F
Sbjct: 334 LQASEKGLSRLMEGVANLKRITPTAGGSVGMAYVDELRRKCYEAMDDDLNSPIVISHLF- 392
Query: 96 DALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE---GSTYSEVLQQLKDK 152
DA + IN + ++ +L ++ + D+LGL E GS E ++ D
Sbjct: 393 DACRVINTVVDRKATMSADVLAALAEVFH--TFAFDILGLKEETGGGSGREEAFGKVVDM 450
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+E+R AK NKD++ SD+IR +L G + D + W+
Sbjct: 451 --------------LLEQRMIAKANKDWATSDKIRDNLAALGFEVKDTKDGFTWK 491
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 20/139 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K R+ F M DDLNT+ ++ F + KF+N + Q ++ L I NE+
Sbjct: 347 LDKYRERFIEAMDDDLNTADAISVIF-ELAKFMNTNISD--QSSKEFVQLNLDIFNELTG 403
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VL++ +K+++ + V LI +RA AKK K+F+ +DQIR
Sbjct: 404 VLNI-----------------ANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRD 446
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT GIA+ D R+ W+
Sbjct: 447 ELTAMGIAIEDTRQGVKWK 465
>gi|218134243|ref|ZP_03463047.1| hypothetical protein BACPEC_02135 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991618|gb|EEC57624.1| cysteine--tRNA ligase [[Bacteroides] pectinophilus ATCC 43243]
Length = 474
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M DD NT+ +T F D +K N S K ++ L + +++ +LG
Sbjct: 362 QFENAMDDDFNTADAITAIF-DMVKLANTSCKSSDSKKF-----LQDVLDKIAGTCGILG 415
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L EV+ + EL + D+ +LI+ER A+K+++F+++D+IR L KG
Sbjct: 416 L--------EVVSE--------KELLDEDIDNLIQERQQARKDRNFARADEIRQLLLDKG 459
Query: 195 IALMDVRKETIWR 207
I L D R+ W+
Sbjct: 460 IVLEDTREGVRWK 472
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALK----FINNSKKQPKQQQLSLIESLLKIENEV 126
+L ++F M+DD N++ + F +A+K ++++ P L+E+L N++
Sbjct: 351 ELWNDFCAAMNDDFNSAKAIACVF-EAVKKGNRLLDDANDSPGAD---LLETLNLFYNDI 406
Query: 127 KVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ +VLG+ L + +Y + K+K + + + I+ER A+KNKDF+++D+
Sbjct: 407 HAISNVLGIFLLDSKSY---FKAKKEKGMADMAIDPAQIEAFIQERVDARKNKDFARADE 463
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L + L D + T WR
Sbjct: 464 IRDHLQSINVVLEDGPQGTTWR 485
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 19/169 (11%)
Query: 42 LQDCEVALSPFQEDARSGSITPAA--EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
L++C L + E ++ + TP ED + F + DD NT+ L GA + ++
Sbjct: 319 LRNCYSDLLFYMERSQEKN-TPDTWLEDVVNNGYKRFCNALDDDFNTAGAL-GAVFEVVR 376
Query: 100 FINNSKKQPKQ-QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
+NN K+ + + +LI+S E V+ +L V+G+ G ++
Sbjct: 377 DLNNYLKENETLDKQALIKSKDFFET-VENILGVIGINTIGEEFA-------------GT 422
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+ +++ LI+ER A+K +DF+++D IR +L KGI L D T W+
Sbjct: 423 LSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILEDTPLGTRWK 471
>gi|421090375|ref|ZP_15551169.1| cysteine--tRNA ligase [Leptospira kirschneri str. 200802841]
gi|410000953|gb|EKO51579.1| cysteine--tRNA ligase [Leptospira kirschneri str. 200802841]
Length = 471
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D ++ P +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDIKTDFYFPFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L
Sbjct: 350 LMQTWKKEFEESLADDLNISKALAVVF-ESVKQINSFLDTNQSDSKQRIEYIQIL----- 403
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ Y+ +L L ++ K +L ++++ LIE+R A+KNKDF++SD
Sbjct: 404 ---------------AYYNRILGVLNFESKK--DLLDSEIDSLIEKRQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|386085793|ref|YP_006001667.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
Length = 447
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ ++N + +L V
Sbjct: 343 DAFQAAMDDDFNTANGVTVLF-DMAKWINSGNYDET------------VKNAFEKILQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E T E D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFEEETLDE------------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|189465034|ref|ZP_03013819.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
17393]
gi|189437308|gb|EDV06293.1| cysteine--tRNA ligase [Bacteroides intestinalis DSM 17393]
Length = 491
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L DA +G ITP+A + K +R++ Y M+DDLNT I+ D
Sbjct: 334 LQAAEKGLGRMM-DAVNGLEKITPSATSSVDVKAVREKCYEAMNDDLNTP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ INN + L ++ + D+LGL E + E ++ A
Sbjct: 392 ARMINNIIAGNDTITAEDLKDLKETFHL-----FCFDILGLKEENDSNEE-----REVAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+E+R AK NKD++ SD+IR +LT G + D ++ + W+
Sbjct: 442 GKV------VDMLLEQRMMAKANKDWATSDKIRNELTALGFEIKDGKEGSEWK 488
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 45 CEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS 104
C+ AL D+ TP I+ L + F M +D NT+ F + +K IN
Sbjct: 326 CD-ALGTAHSDSAEIVATPKDIKKIESLEERFQKAMDNDFNTAQAQASLF-ETVKVINKI 383
Query: 105 KKQ----PKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+Q P +L++S ++ + ++G++ E + +E L K L +++
Sbjct: 384 IQQLPDVPATSDYNLLKSG---SADIVKLAAIMGIVQENA--AEYLAHKKAAMLAETDIS 438
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E ++L LI ER A+ +K++++SD+IR +L +GI L D + T W
Sbjct: 439 EAEILALIAERNQARTDKNWTRSDEIRDELLDRGIELKDGPEGTGW 484
>gi|363581831|ref|ZP_09314641.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium HQM9]
gi|363583101|ref|ZP_09315911.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium HQM9]
Length = 497
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQLSLIESLLKIENE 125
I + Y M+DD N S IL + +KFIN K + + L+L++ +
Sbjct: 372 ITTWKQRCYDAMNDDFN-SPILIAHLFETVKFINQVKEGKSKISKSDLALLKKTMH---- 426
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
DVLGL +++ +L D A++ LIE R A+ NKDF+ SD+
Sbjct: 427 -NFTFDVLGLQASAEATNDITSKL-DGAIEL----------LIELRKEARLNKDFALSDK 474
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR +L KGI L D R+ T +
Sbjct: 475 IRDELVEKGIQLKDGREGTTY 495
>gi|386712445|ref|YP_006178767.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
gi|384072000|emb|CCG43490.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
Length = 466
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I+ +++F M DD NT++ ++ F L N Q +Q S++E+ EN +K
Sbjct: 347 IEAHKEQFIQEMDDDFNTANAISVLF--DLTKSANLYLQEEQTHTSVLETY---ENTLKE 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
++ VLGL E +AEL + +V LIEER A+K+++F ++DQIR
Sbjct: 402 LMMVLGLEIE----------------TQAELLDEEVDALIEERKQARKDRNFERADQIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
+L + I L D + T W+
Sbjct: 446 ELKDRNIILEDTSQGTRWK 464
>gi|410447884|ref|ZP_11301976.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
gi|409979464|gb|EKO36226.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
Length = 426
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 30/161 (18%)
Query: 47 VALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKK 106
+L P QE + ED +K F M+DDLNT L+ F A K IN+++
Sbjct: 294 ASLVPLQE-------SDLHEDSVKG----FIDSMNDDLNTPEALSILFGLA-KSINSTQD 341
Query: 107 QPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
Q + + +K + VLGLL + S E Q A+L + ++
Sbjct: 342 AQDQSMYA---------STMKELGKVLGLLNDSS---EAFLQYG------ADLTDEEISQ 383
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
IEER A+ NKDF K+DQIR +L +GI L D T W+
Sbjct: 384 KIEERNQARNNKDFLKADQIRDELVSQGILLDDSSDGTSWK 424
>gi|77417496|sp|Q7US70.2|SYC_RHOBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 537
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 386 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDANQLAAGAD 444
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ +ESL+K + + + VLGL + S D+A AEL ++ V LI
Sbjct: 445 AKSPAVESLVKATSVIAELSRVLGLFAKPPATSG-----GDEA--DAELLDSVVHLLINL 497
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 498 RKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 533
>gi|423133991|ref|ZP_17121638.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CIP 101113]
gi|423326764|ref|ZP_17304572.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
gi|371647762|gb|EHO13258.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CIP 101113]
gi|404608121|gb|EKB07604.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
Length = 492
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K R Y M+DD N S IL +A+KFIN K + + +++L I +
Sbjct: 368 ITKWRQSCYDAMNDDFN-SPILIANLFEAVKFINLIKDNKETISATDLDTL--INSMSAF 424
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V DVLGL + + A E E V LI R A+ NKDF+ SD IR
Sbjct: 425 VFDVLGL------------ENTETASANNEKLEGVVNMLIGMRNEARANKDFAMSDHIRD 472
Query: 189 DLTRKGIALMDVRKET 204
+L + GI L D ++ T
Sbjct: 473 ELAKIGIQLKDGKEGT 488
>gi|86133639|ref|ZP_01052221.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
gi|85820502|gb|EAQ41649.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
Length = 492
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI-ENEVK 127
++ + + Y M+DD NT IL +A+K IN Q K+ + SL E+ L + + +K
Sbjct: 368 VENWKKDCYAAMNDDFNTP-ILISHLFEAVKLIN----QIKEGKGSLTETDLTLFKTTIK 422
Query: 128 V-VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
V DVLGL+ E + Q DK EL LI+ R A++NKD++ SDQI
Sbjct: 423 AFVFDVLGLIGEDA------QDNSDKVKGVVEL-------LIKLRKEARENKDWALSDQI 469
Query: 187 RADLTRKGIALMDVRKET 204
R +L GI L D ++ T
Sbjct: 470 RDELVALGIQLKDGKEGT 487
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46.1|SYC_ANOFW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I++LR+EF M DD NT++ + A L L N +I++ L+ + +
Sbjct: 347 IEELRNEFIREMDDDFNTANGI--AVLFELAKQANVYLMENHTSQQVIQAFLQ---QFEQ 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ DVLGL +L++ EL + ++ LI++R A+KN+DF+ +D+IR
Sbjct: 402 LFDVLGL-----------------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
+L K I L D + T WR
Sbjct: 445 ELKAKNIILEDTPQGTRWR 463
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
+ A D R+ F M DD NT L F A + ++QP +
Sbjct: 331 LGAANSDDASAYRERFTQVMDDDFNTPEALAVMFELAREVNRAKQEQPNEAA-------- 382
Query: 121 KIENEVKVVLDVLGLLP-EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
K+ E+K + VLGLL E T+ + QQ + L+E+++ I +R AK NKD
Sbjct: 383 KLAGELKQLGSVLGLLQQEPQTFLKGTQQ------QGMPLSESEIEAKIAQRIEAKANKD 436
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIW 206
F+++D IR +L GI L D R+ T W
Sbjct: 437 FAQADAIRDELAALGIILKDSREGTSW 463
>gi|418006034|ref|ZP_12646003.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW1]
gi|410545054|gb|EKQ19362.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW1]
Length = 444
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
+ P ++ L+D F T M DD+N + LT F D K +N + + ES+
Sbjct: 317 GVDPQITKQLQTLKDRFVTAMDDDINVQNGLTVLF-DLAKLLNEYANEETVKS----ESI 371
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
+ NE L + G++ + + D+ L++ R TA+ KD
Sbjct: 372 NDLLNEYDAWLQIFGVV-----------------FADQKSLDADIDALVKARDTARAAKD 414
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
F+KSDQIR L +GI L D + T WR
Sbjct: 415 FAKSDQIRDQLAAQGIILEDTPQGTRWR 442
>gi|421613455|ref|ZP_16054536.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH28]
gi|408495750|gb|EKK00328.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH28]
Length = 539
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 388 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDSNQLAAGAD 446
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ +ESL+K + + + VLGL + S D+A AEL ++ V LI
Sbjct: 447 AKSPAVESLVKATSVIAELSRVLGLFAKPPATSG-----GDEA--DAELLDSVVHLLINL 499
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 500 RKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 535
>gi|329947309|ref|ZP_08294576.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328525526|gb|EGF52570.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 549
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 52 FQEDARSGSI-TPAAEDCIKKLRDEFYTRMSDDLNTS------HILTGAFLDALKFINNS 104
F +D + S+ PAA+ + L EF M +DLN + H A AL
Sbjct: 383 FSDDGGANSVDAPAAQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALAKAEAG 442
Query: 105 KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTY-SEVLQQLKDKALKRA-ELAEN 162
K+ L ES+ + +++ LDVLGL P + + VL + A E +
Sbjct: 443 SSSSKEADADLHESVADLALDLRSQLDVLGLDPLAEPWRTHVLDGVGSSQSGTAMETLDR 502
Query: 163 DVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ H ++ERA A+ KD+ ++D +R LT+ G+ + D W
Sbjct: 503 LIQHDLDERARARATKDWPRADALRDKLTQAGVVVEDSPSGARWH 547
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ KL + F M DDLNT+ + F + + + K K ++ + E+L +I ++
Sbjct: 347 LAKLEEGFTAAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAA--EALRRILADL 404
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+LG+ G E L +LK L R + V L+ ER A+K KDF++SD I
Sbjct: 405 DTWSGILGVF--GRDSREFLAELKASRLARLGIDAVRVDGLVAERQEARKTKDFARSDAI 462
Query: 187 RADLTRKGIALMDVRKETIW 206
R +L G+ +MD W
Sbjct: 463 RDELAGLGVTVMDTPAGPQW 482
>gi|410939295|ref|ZP_11371128.1| cysteine--tRNA ligase [Leptospira noguchii str. 2006001870]
gi|410785635|gb|EKR74593.1| cysteine--tRNA ligase [Leptospira noguchii str. 2006001870]
Length = 471
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + + ++ S +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPNIKTDSYFSFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENE 125
++ + E ++DDLN S L F + + F+ ++ + +Q+ I+ L +
Sbjct: 350 LVQTWKKELEESLADDLNVSKALAVVFESVKQINFLLDTNQSDSKQRTEYIQILAYYDR- 408
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+LG+L S + +L ++++ LIEER TA+KNKDF++SD
Sbjct: 409 ------ILGVLNFES---------------KKDLLDSEIDFLIEERQTARKNKDFARSDA 447
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 448 IRDQLLAQGILIEDTKEGIRWR 469
>gi|238916434|ref|YP_002929951.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
gi|259511832|sp|C4Z3N5.1|SYC_EUBE2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|238871794|gb|ACR71504.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
Length = 472
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
I + +D KK D M DD NT+ ++ F + +K N++ ++ I++L+
Sbjct: 350 IIASIDDIYKKFEDS----MDDDFNTADAISAIF-ELVKLANSNSSSDNSKEY--IDTLM 402
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
K ++ + D+LGL K K+ E+ + D+ LI ER A+K+K+F
Sbjct: 403 K---KITTLTDILGL----------------KTDKKEEMLDEDIEALIAERQQARKDKNF 443
Query: 181 SKSDQIRADLTRKGIALMDVRKETIW 206
+++D+IR +L KGI L D R+ W
Sbjct: 444 ARADEIRDELLAKGIVLKDTREGVRW 469
>gi|32473247|ref|NP_866241.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
gi|32397926|emb|CAD73927.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
Length = 628
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 477 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDANQLAAGAD 535
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ +ESL+K + + + VLGL + S D+A AEL ++ V LI
Sbjct: 536 AKSPAVESLVKATSVIAELSRVLGLFAKPPATSG-----GDEA--DAELLDSVVHLLINL 588
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 589 RKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 624
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 9 LFPAFVRTLLLDIFWLNELFAS----IPQYTGNETITLQDCEVALSPFQEDARSGSITPA 64
P +R +L + L S I G E I ++C L +E +
Sbjct: 285 FHPVAIRLFMLSAHYRTPLNFSVENLINSAKGAERI--RNCWNELLNAEERCYDSGTSMG 342
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK--QQQLSLIESLLKI 122
+ I L+++F + + DD NT+ + G +A+K +N K + + ++L++
Sbjct: 343 ETETINSLKEKFDSNLKDDFNTAGAI-GVLFEAVKIVNQVLKGNNFDKNFIDSAKALMRY 401
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+E+ ++D+ L + +E+ ++L + LI ER A+K ++F+K
Sbjct: 402 ADEILGIIDINNTLKAENESTELNEEL--------------INELIREREEARKQRNFAK 447
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D+IR L+ GI L D T W+
Sbjct: 448 ADEIRDKLSSMGIVLEDTPSGTRWK 472
>gi|87310876|ref|ZP_01093002.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
gi|87286391|gb|EAQ78299.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
Length = 507
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 19 LDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED---CIKKLRDE 75
LD F+ LF + TG L P + + G P + I K RD
Sbjct: 332 LDSFY--RLFERYERLTGESFFDL--------PAAKTRKEGDFEPKKSELLVAIAKHRDA 381
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQ-----PKQQQLSLIESLLKIENEVKVVL 130
+ +M DD NT ++ F + + IN + Q K L+ I+ + E+ +L
Sbjct: 382 YLEKMDDDFNTGGAVSELF-EMARLINKTIDQQKLEGDKSADLTNIKKAFSVLRELTGIL 440
Query: 131 DVLGLLPEGSTY--SEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ PE S+ SE++ QL + LI+ RA+A++ KDF SD IR
Sbjct: 441 GIFVTAPEKSSSGDSELVGQL--------------MQLLIDVRASARQKKDFEMSDVIRD 486
Query: 189 DLTRKGIALMDVRKETIWR 207
LT G+ L D ++ WR
Sbjct: 487 RLTAMGVTLEDRKEGATWR 505
>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 461
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 26/155 (16%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
E+A +GS+ ++ + F M DD+NT+ LT F + +K IN ++ L
Sbjct: 330 ENANAGSLDEEVKELVDAEVKYFEDAMEDDINTADALTAIF-NIVKIINTKVDDSSKETL 388
Query: 114 SLI-ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
+ +SL K+ VLG+L + K++ L E A L ER
Sbjct: 389 EYVRDSLNKLSK-------VLGIL-----------ERKEEGLSPEEEA------LFYERL 424
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KNKD++KSD++R L GI + D R+ T W+
Sbjct: 425 EARKNKDYAKSDELRDKLLAMGIEVKDSREGTTWK 459
>gi|399055784|ref|ZP_10743434.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433543315|ref|ZP_20499725.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398046647|gb|EJL39241.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432185444|gb|ELK42935.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 468
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +LR+ F T M DDLNT++ +T F D +K N + Q + EV+
Sbjct: 349 INELRERFITEMDDDLNTANAITVIF-DVVKEAN---LYLRHQNVGA--------GEVRA 396
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+++L E+ + L + + EL ++++ LI ER A+K K+F++SD+IR
Sbjct: 397 YMELL---------VELTEVLGLEIAEEQELVDSEIDALIAERTEARKAKNFARSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + WR
Sbjct: 448 LLAAKGIVLEDTPQGVRWR 466
>gi|373110584|ref|ZP_09524850.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
gi|371642318|gb|EHO07886.1| cysteinyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
Length = 492
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K R Y M+DD N S IL +A+KFIN K + + +++L I +
Sbjct: 368 ITKWRQSCYDAMNDDFN-SPILIANLFEAVKFINLIKDNKETISATDLDTL--INSMSAF 424
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V DVLGL + + A E E V LI R A+ NKDF+ SD IR
Sbjct: 425 VFDVLGL------------ENTETASANNEKLEGLVNMLIGMRNEARANKDFAMSDHIRD 472
Query: 189 DLTRKGIALMDVRKET 204
+L + GI L D ++ T
Sbjct: 473 ELAKIGIQLKDGKEGT 488
>gi|153814444|ref|ZP_01967112.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
gi|145848840|gb|EDK25758.1| cysteine--tRNA ligase [Ruminococcus torques ATCC 27756]
Length = 469
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F D +K++N + ++ +++LL + + ++ DVLG+
Sbjct: 358 FERAMDDDFNTADAIAAIF-DLVKYMNTTADGASSKEY--LQNLL---DRLCLLTDVLGI 411
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ +K E+ ++++ +IE+R A+K+++F+ +DQIR +L KGI
Sbjct: 412 I----------------VIKEEEMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGI 455
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 456 ILEDTREGVKWK 467
>gi|449137055|ref|ZP_21772388.1| cysteinyl-tRNA synthetase [Rhodopirellula europaea 6C]
gi|448884330|gb|EMB14830.1| cysteinyl-tRNA synthetase [Rhodopirellula europaea 6C]
Length = 599
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 448 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDANQLAAGAD 506
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ +ESL+K + + + VLGL + S D+A AEL ++ V LI
Sbjct: 507 AKSPSVESLVKATSVIAELSRVLGLFAKPPATSG-----GDEA--DAELLDSVVHLLINL 559
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 560 RKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 595
>gi|317500158|ref|ZP_07958391.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087615|ref|ZP_08336543.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
gi|316898447|gb|EFV20485.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330399794|gb|EGG79454.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 468
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F D +K++N + ++ +++LL + + ++ DVLG+
Sbjct: 357 FERAMDDDFNTADAIAAIF-DLVKYMNTTADGASSKEY--LQNLL---DRLCLLTDVLGI 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ +K E+ ++++ +IE+R A+K+++F+ +DQIR +L KGI
Sbjct: 411 I----------------VIKEEEMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGI 454
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 455 ILEDTREGVKWK 466
>gi|420162183|ref|ZP_14668943.1| cysteinyl-tRNA synthetase [Weissella koreensis KCTC 3621]
gi|394744617|gb|EJF33559.1| cysteinyl-tRNA synthetase [Weissella koreensis KCTC 3621]
Length = 471
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
E ++ + D F M DD N + L F D + N Q + Q+ S IE +LK +E
Sbjct: 349 EKQVQVIVDRFILAMDDDFNAQNGLAAIF-DLAELANIYGTQAEVQE-STIEIILKTMSE 406
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ ++ V GL +E L Q+ D LI++R A++N+D++++DQ
Sbjct: 407 LMMIFGVDGLAK-----TEELDQVIDD--------------LIQDREIARQNRDYARADQ 447
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR +LT++GI L D + W
Sbjct: 448 IRDELTQQGIILEDTPQGVRW 468
>gi|339634552|ref|YP_004726193.1| cysteinyl-tRNA synthetase [Weissella koreensis KACC 15510]
gi|338854348|gb|AEJ23514.1| cysteinyl-tRNA synthetase [Weissella koreensis KACC 15510]
Length = 471
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
E ++ + D F M DD N + L F D + N Q + Q+ S IE +LK +E
Sbjct: 349 EKQVQVIVDRFILAMDDDFNAQNGLAAIF-DLAELANIYGTQAEVQE-STIEIILKTMSE 406
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ ++ V GL +E L Q+ D LI++R A++N+D++++DQ
Sbjct: 407 LMMIFGVDGLAK-----TEELDQVIDD--------------LIQDREIARQNRDYARADQ 447
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR +LT++GI L D + W
Sbjct: 448 IRDELTQQGIILEDTLQGVRW 468
>gi|423399363|ref|ZP_17376561.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|423409861|ref|ZP_17387010.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401644463|gb|EJS62153.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401652401|gb|EJS69958.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQSAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYIK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|336438037|ref|ZP_08617679.1| hypothetical protein HMPREF0990_00073 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336016481|gb|EGN46266.1| hypothetical protein HMPREF0990_00073 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 308
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 22/134 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ + F D +K++N + ++ +++LL + + ++ DVLG+
Sbjct: 197 FERAMDDDFNTADAIAAIF-DLVKYMNTTADGASSKEY--LQNLL---DRLCLLTDVLGI 250
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ +K E+ ++++ +IE+R A+K+++F+ +DQIR +L KGI
Sbjct: 251 I----------------VIKEEEMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGI 294
Query: 196 ALMDVRKETIWRPC 209
L D R+ W+
Sbjct: 295 ILEDTREGVKWKKA 308
>gi|88803012|ref|ZP_01118539.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
gi|88781870|gb|EAR13048.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
Length = 492
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 20/138 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV-- 126
++K + Y M+DD NT +L +A+K IN Q K+Q+ S+ + L + E
Sbjct: 368 VEKWKKSCYAAMNDDFNTP-VLISYLFEAVKIIN----QIKEQKESITATDLGVLQETLN 422
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
V DVLGL +EVL +K EL LI+ R A++NK+++ SDQI
Sbjct: 423 TFVFDVLGLT------NEVLSHHSEKTNGVVEL-------LIKLRKEARENKEWALSDQI 469
Query: 187 RADLTRKGIALMDVRKET 204
R +L GI L D + T
Sbjct: 470 RDELIELGIQLKDGKDGT 487
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A D R+ F M DD NT L F A + + QP + K+
Sbjct: 334 ANRDAASAYRERFTQVMDDDFNTPEALAVMFELAREVNRAKQDQPVEAA--------KMA 385
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE-----LAENDVLHLIEERATAKKNK 178
E+K + +LGLL QQ+ LK + L+E+++ I +R AK NK
Sbjct: 386 GELKQLGSILGLL----------QQVPQTFLKGTQQQGMPLSESEIEAKIAQRIEAKTNK 435
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIW 206
DF+++D IR +L GI L D R+ T W
Sbjct: 436 DFAQADAIRDELAAMGIILKDSREGTSW 463
>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|375282187|ref|YP_005102622.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|423357619|ref|ZP_17335214.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|423376318|ref|ZP_17353632.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423572081|ref|ZP_17548295.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|226735048|sp|B7HQS4.1|SYC_BACC7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765178|sp|B9IZH4.1|SYC_BACCQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|358350710|dbj|BAL15882.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401074485|gb|EJP82885.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|401088775|gb|EJP96957.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401198803|gb|EJR05716.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
+KK + F M+DD NT++ +T + N Q L S + I+ VK
Sbjct: 347 LKKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIQAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|418328495|ref|ZP_12939606.1| cysteine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
gi|365231813|gb|EHM72830.1| cysteine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 466
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + I+ L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSIKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K ++ EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSK--EKEELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 MLKARHIILED 456
>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 468
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
+TP + ++ +R+ F+ +M DD NT +T F + + +N +QP + L E+ L
Sbjct: 341 VTPEWAEKLETIRNLFHAKMQDDFNTPDAITAVF-EWVSEVNALLQQPVTVRGDL-EAAL 398
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
++ E+ VL + L PE EL ++ LI ERA A+K K++
Sbjct: 399 QLFEEMNGVLRI-ALPPE------------------TELPGEEIEALIAERAEARKAKNW 439
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWR 207
+++D+IR L +GI L D + WR
Sbjct: 440 ARADEIRDLLDARGIVLEDTPQGMRWR 466
>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 58 SGSITPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
S +T + +KK+ D EF M DD NT++ ++ F L N K +
Sbjct: 333 SAELTDNNSEWLKKIEDLHGEFIKEMDDDFNTANGISVLF--ELSRQANYYLLEKNTSVE 390
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
+IE+ +K E +++ DVLGL +L EL ++++ LIE+R A
Sbjct: 391 VIEAFMK---EFEILFDVLGL-----------------SLGGEELLDDEIDALIEKRNQA 430
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+K ++F SDQIR L I L D + T W+
Sbjct: 431 RKERNFQLSDQIRDQLKEMNIILEDTAQGTRWK 463
>gi|399889684|ref|ZP_10775561.1| cysteinyl-tRNA ligase [Clostridium arbusti SL206]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ RD++ +M DD NT+ DA+ I + K I S + IE+ ++
Sbjct: 347 LNSYRDKYIEKMDDDFNTA--------DAISVIFDLSKD--------INSNINIESSKEI 390
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ L L+ E +LQ++ K L + ++ LIEER A++ K+F+ SD+IR
Sbjct: 391 IQTALNLIRELGKPLGILQKVTKKDLDK------EIEKLIEERQKAREEKNFALSDKIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
DL KGI L+D + W+
Sbjct: 445 DLKAKGIVLLDTPQGVRWK 463
>gi|257459527|ref|ZP_05624636.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
gi|257442952|gb|EEV18086.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
Length = 476
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 70/150 (46%), Gaps = 28/150 (18%)
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIESLL 120
PAAE K R E +SDDLNTS L A LD+ N + PK + L
Sbjct: 344 PAAE---VKFRSEMMEFLSDDLNTSGAL--AVLDSFVASANEALDRAPKDKALKA----- 393
Query: 121 KIENEVKVVLDVLGLLPEGST----YSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
+I ++ LG+L E T + QQ RA++ E LI++RA AK
Sbjct: 394 RIAANLEFAKQTLGILYEDETEYFRFGVSEQQ-------RAQIEE-----LIKQRAQAKA 441
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF+ +D IRA LT I +MD T+W
Sbjct: 442 EKDFASADAIRARLTDMKIEVMDTTSGTVW 471
>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 440
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 322 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 373
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 374 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 416
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 417 IRDDLKDRNIILEDTAQGTRWK 438
>gi|359727769|ref|ZP_09266465.1| cysteinyl-tRNA synthetase [Leptospira weilii str. 2006001855]
Length = 448
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + D + SI
Sbjct: 267 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNCLDRLLDLEPDMKIDSIFTFTLP 325
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + EF ++DDLN S L F ++LK IN ++ + +Q++ I+ L +
Sbjct: 326 LAQTWKKEFEESLADDLNISKALAVVF-ESLKQINSLLDTNQTDSKQRVEFIQILAYYDR 384
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ G+L + KD L ++++ LIEER TA+KNK+F++SD
Sbjct: 385 -------IFGILN--------FESPKDP------LIDSEIDSLIEERQTARKNKNFARSD 423
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 424 AIRDQLLAQGILIEDTKDGVRWR 446
>gi|308179697|ref|YP_003923825.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308045188|gb|ADN97731.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 470
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + A + K N Q Q+
Sbjct: 336 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGV-AAVYELAKLANVYAAQATVQK- 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ + + V G+ E + A LA++ + LI+ER
Sbjct: 393 ---ETLIALQKALVQLTGVFGVTFETAN---------------ATLADDAIQALIDEREA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K KDF+K+DQIR DL +GI L D + +R
Sbjct: 435 ARKAKDFAKADQIRDDLKAQGIILEDTPQGVRFR 468
>gi|255282796|ref|ZP_05347351.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
gi|255266570|gb|EET59775.1| cysteine--tRNA ligase [Marvinbryantia formatexigens DSM 14469]
Length = 469
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 22/133 (16%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M DD NT+ ++ F + +KF N + + + L+ +++++ + D+LG
Sbjct: 357 KFDDAMDDDFNTADAISAIF-ELVKFANTNVTEDSSKALAE-----AVKDKIVELSDILG 410
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L+ E K+ E+ + ++ LIEER A+K K+F+++D+IR L KG
Sbjct: 411 LIVE----------------KKEEMLDAEIEALIEERQAARKAKNFARADEIRDILLGKG 454
Query: 195 IALMDVRKETIWR 207
I L D R+ W+
Sbjct: 455 IILKDTREGVKWK 467
>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 420
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
+KK + F M+DD NT++ +T + N Q L S + I+ VK
Sbjct: 302 LKKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIQAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|187629790|sp|A0R8G1.1|SYC_BACAH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 40 ITLQDCEVALSPFQEDARSGSITPAAEDCIKK---LRDEFYTRMSDDLNTSHILTGAFLD 96
+ L++ + AL+ F ++ D +K + F M DD NT + F +
Sbjct: 311 VALKEAKTALTRFYHAFKAYEQVYGQNDSTQKDEQFIERFNIAMRDDFNTPEAIAVLF-E 369
Query: 97 ALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLK-DKALK 155
+ +N + K+ + +Q ++ L+ + +LGL+ +V + LK D +
Sbjct: 370 LNRELNRAVKEQQAEQAAIYYVTLR------HLTQILGLVQH-----DVDEFLKSDIGQE 418
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+++++ +I++RA AKK KDFS +D IR L +G+ L D R+ T+WR
Sbjct: 419 VLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTRQGTLWR 470
>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
Length = 420
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 11 PAFVRTLLLDIFWLNELFAS--IPQYTGNETITLQDCEVALSPFQEDARSGS-ITPAAED 67
P +R +L + + + + S + Q T N L+ + A S + S + +T E
Sbjct: 241 PQLIRFFMLSVHYRHPINFSEELLQSTNN---GLERIKTAYSNLKHRMESSTDLTDHNEK 297
Query: 68 CI---KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+ +K + F M+DD NT++ +T + N Q L S + IE
Sbjct: 298 WLADLEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEA 349
Query: 125 EVK---VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
VK + D+LGL L + EL + ++ LI++R A+KN+DF+
Sbjct: 350 YVKQLETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFA 392
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
SDQIR DL + I L D + T W+
Sbjct: 393 LSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|423614620|ref|ZP_17590477.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
gi|401237464|gb|EJR43916.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+++ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 EILFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|376264117|ref|YP_005116829.1| cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
gi|254765177|sp|C1ET19.1|SYC_BACC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
gi|364509917|gb|AEW53316.1| Cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|335045245|ref|ZP_08538268.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
gi|333759031|gb|EGL36588.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
Length = 472
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 66 EDCIKKLRDE---FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
E+ +KK+ + F +M DDLNT+ +T F + ++ N++ + + I +
Sbjct: 344 EESLKKVEEYTALFSEKMEDDLNTADAITQIF-ELVRLANSTVNEESSKDFGSI-----M 397
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+ + ++ VLG+ E K K E E V LI +R AKKNKDF++
Sbjct: 398 KESIAALVHVLGIRTE------------KKEEKLDERLEEKVNALIAKRQEAKKNKDFTE 445
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D+IR +L GIAL D R W+
Sbjct: 446 ADRIRDELLEMGIALKDTRNGVEWQ 470
>gi|417303250|ref|ZP_12090309.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica WH47]
gi|327540430|gb|EGF27015.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica WH47]
Length = 539
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 59 GSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQ 110
G PA + I +R++F M DD NT ++ DAL+ +N N
Sbjct: 388 GGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAIS-VLFDALRTLNRHIDANQLVAGAD 446
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ +ESL+K + + + VLGL + S D+A AEL ++ V LI
Sbjct: 447 AKSPAVESLVKATSVIAELSRVLGLFAKPPATSG-----GDEA--DAELLDSVVHLLINL 499
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
R A++ KD++ D IR L G+AL+D ++ T W
Sbjct: 500 RKEARERKDYATGDAIRDRLADLGVALLDKKEGTSW 535
>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229601947|ref|YP_002864741.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|386733956|ref|YP_006207137.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|421510415|ref|ZP_15957308.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640503|ref|ZP_16081085.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423553976|ref|ZP_17530303.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|33301677|sp|Q81VV1.1|SYC_BACAN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216160|sp|Q63HB0.1|SYC_BACCZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216199|sp|Q6HPS8.1|SYC_BACHK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735045|sp|B7JK97.1|SYC_BACC0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765175|sp|C3P9N5.1|SYC_BACAA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765176|sp|C3LJ62.1|SYC_BACAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
E33L]
gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|384383808|gb|AFH81469.1| Cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|401182183|gb|EJQ89322.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401819497|gb|EJT18674.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403392319|gb|EJY89573.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 465
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 440
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 322 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 373
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 374 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 416
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 417 IRDDLKDRNIILEDTAQGTRWK 438
>gi|227501071|ref|ZP_03931120.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
gi|227216844|gb|EEI82242.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
Length = 471
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 66 EDCIKKL---RDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIE 117
+D I++L +++F M DDLNT+ +T F D KFIN NS K + L +
Sbjct: 346 QDLIRELDSFKNKFIEVMDDDLNTADAITVLF-DIAKFINTKIDENSDKDLVNKTFDLYK 404
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
SL D LGLL + K+ + A++ E LI +R+ AKK
Sbjct: 405 SLF----------DTLGLLA----------KKKEDNVDVAKIEE-----LIAKRSEAKKA 439
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF+ +D IR +L+ GI + D R+ W
Sbjct: 440 KDFATADAIRDELSHMGITIKDTREGVKW 468
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 60 SITPAAE-DCIKKLRDE-FYTRMSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLI 116
I PA E D + D F M DD NT+ + A L A+ IN+ +++ ++
Sbjct: 324 GIVPAKEADVAETDHDRRFAEVMDDDFNTAGAI--AVLHAVANDINHYRREGDEEAAKRS 381
Query: 117 ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
++L V++ VLGLL + E Q A +EL D+ +I+ RA A+K
Sbjct: 382 AAVL-----VRLGA-VLGLLQQNP---EAFFQ----ADTGSELTAEDIEAMIQARADARK 428
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KDF+++D+IR DL KGI L D R+ T WR
Sbjct: 429 AKDFAEADRIRDDLLEKGIILDDSREGTTWR 459
>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 449
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 331 MEKFQAAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIEAYVK---QL 383
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 384 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 426
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 427 RDDLKERNIILEDTAQGTRWK 447
>gi|430377175|ref|ZP_19431308.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
gi|429540312|gb|ELA08341.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
Length = 470
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT L+ F + + K K +L + L KI +K + + L +
Sbjct: 350 FSRAMHDDFNTPKALSVLF----QLVGEINKAFKNNELDKSKHLAKI---LKTLAEPLNI 402
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
G +E LQ K+L L+E ++L I+ R AK +K+F+ +DQIR +L +GI
Sbjct: 403 AQAGP--NEFLQ----KSLNADGLSETEILAKIDARTQAKIDKNFTLADQIRDELNAQGI 456
Query: 196 ALMDVRKETIWR 207
L D R T+WR
Sbjct: 457 ELEDSRAGTMWR 468
>gi|407708038|ref|YP_006831623.1| 10 kDa chaperonin [Bacillus thuringiensis MC28]
gi|407385723|gb|AFU16224.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 465
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|423620302|ref|ZP_17596133.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
gi|401248862|gb|EJR55183.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
Length = 465
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 465
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|218131787|ref|ZP_03460591.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
gi|217986090|gb|EEC52429.1| cysteine--tRNA ligase [Bacteroides eggerthii DSM 20697]
Length = 491
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 41 TLQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLD 96
LQ E L+ DA G ITPAA + K LR + Y M+DDLN+ I+ +
Sbjct: 333 ALQAAEKGLARLM-DAVHGLDKITPAATSTVDAKALRAKCYEAMNDDLNSP-IVIAHLFE 390
Query: 97 ALKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
K +NN + L ++ + D+LGL + ++ +E ++ A
Sbjct: 391 GAKMVNNILAGNDTITAEDLKELKETFHL-----FCFDILGLKEDNASNAE-----REAA 440
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER AK NKD++ SD+IR +LT G + D + W+
Sbjct: 441 FGKV------VDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKDGCEWK 488
>gi|384184174|ref|YP_005570070.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672461|ref|YP_006924832.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452196467|ref|YP_007476548.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409171590|gb|AFV15895.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452101860|gb|AGF98799.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 465
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT+ L+ D + +N +KK+ + L +E+K + VL
Sbjct: 351 DRFIVAMDDDFNTAEALS-VLFDLARELNRAKKEATKLAPGLA-------HELKRLGGVL 402
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAE----LAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
GLL QQ + LK L+E+++ I RA AKK +DF+ +D IR +
Sbjct: 403 GLL----------QQQPEAFLKGGAGELPLSESEIEAKIVARAEAKKARDFAAADGIRDE 452
Query: 190 LTRKGIALMDVRKETIW 206
L GI L D R+ T W
Sbjct: 453 LATLGIVLKDSREGTSW 469
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VA+ + R A + I++ R +FY M DD NT+ L F +A
Sbjct: 322 TLENIRVAMERAEISFRWEKHEFEAYEAIREARKKFYEAMDDDFNTAEALKAVF-EASNA 380
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N Q + + S++ + KVV +V G+ + + ++ KA + EL
Sbjct: 381 VNRYLTQVETPKESILRKAWEF---FKVVGEVFGI------FEDYFKE--QKAGEEEEL- 428
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ L+E RA +K K+F+ +D+IR L GI L D + T+W+
Sbjct: 429 ---IKLLVEVRAQLRKEKNFALADKIRTQLRELGIQLEDTPQGTVWK 472
>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
gi|61216207|sp|Q6MKR7.1|SYC_BDEBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
Length = 482
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 41 TLQDCEVALSP--FQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
L E L+P QEDA IT +D KK+ + M+ D T F + +
Sbjct: 321 ALSMAESYLTPEVTQEDAAFAKIT---QDAWKKVEEA----MNHDFGTPDAFAAMF-EVV 372
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
+ N ++ + ++ L N V+ + ++ L E + L +L D LK+
Sbjct: 373 RQFNAQVRRGMKANPAIQGKALAFHNFVRKMGSMMSLFQEPA--HAFLIKLDDMLLKKMN 430
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
L + V L+ ER A+ KDF+KSD++RA +T GI++ D + + W
Sbjct: 431 LERSAVDALVAERGEARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|317474598|ref|ZP_07933872.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|316909279|gb|EFV30959.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 491
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 41 TLQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLD 96
LQ E L+ DA G ITPAA + K LR + Y M+DDLN+ I+ +
Sbjct: 333 ALQAAEKGLARLM-DAVHGLDKITPAATSTVDAKALRAKCYEAMNDDLNSP-IVIAHLFE 390
Query: 97 ALKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
K +NN + L ++ + D+LGL + ++ +E ++ A
Sbjct: 391 GAKMVNNILAGNDTITAEDLKELKETFHL-----FCFDILGLKEDNASNAE-----REAA 440
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER AK NKD++ SD+IR +LT G + D + W+
Sbjct: 441 FGKV------VDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKDGCEWK 488
>gi|415709503|ref|ZP_11463128.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 6420B]
gi|388056175|gb|EIK79051.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 6420B]
Length = 561
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
+L ++F M+DD+N S + F I++ K Q Q ++ L+ + +V
Sbjct: 414 ELPEDFTRAMNDDINVSGAIAEIFTTIRQGNALIDDCSKDSSQAQSESVQKLIYLAVLQV 473
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI-----EERATAKKNKDFS 181
+ +LD LGL P T++ Q + E E L + + RA A+K KDF+
Sbjct: 474 RAMLDTLGLDPYAKTWASNDNQSSAEGSNGKESKEYSALDSLITLQLKARADARKAKDFA 533
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+D IR L GI ++D + + W
Sbjct: 534 TADAIRDALNNAGIVIVDTSQGSSWH 559
>gi|357060989|ref|ZP_09121750.1| cysteinyl-tRNA synthetase [Alloprevotella rava F0323]
gi|355375214|gb|EHG22502.1| cysteinyl-tRNA synthetase [Alloprevotella rava F0323]
Length = 495
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
E +GSIT D K+L + Y M+DDLNT +++ F DA + +N + ++Q
Sbjct: 356 EPTANGSITL---DYAKELEAKCYEAMNDDLNTPIVISHLF-DACRVVN---QLIDKKQT 408
Query: 114 SLIESLLKIENEVKVV-LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
++L K++ + D+LGL E D R E + L+E RA
Sbjct: 409 ITSDALTKLQEVFRTFSFDILGLKAEA-----------DGNAAREESFGKAIDLLLEVRA 457
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK KD+S SDQIR +L+ G + D + W+
Sbjct: 458 KAKAAKDWSTSDQIRDELSAYGFEVKDTKDGATWK 492
>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|390953343|ref|YP_006417101.1| cysteinyl-tRNA synthetase [Aequorivita sublithincola DSM 14238]
gi|390419329|gb|AFL80086.1| cysteinyl-tRNA synthetase [Aequorivita sublithincola DSM 14238]
Length = 492
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I+ R Y M+DD N S IL +A++F+N+ K++ + +E L + N+
Sbjct: 365 IESWRKSCYEAMNDDFN-SPILIANLFEAVRFVNSIKEEKETISAKDLELLKQTMNDF-- 421
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ +VLGL S S Q +K EL LI+ R A+ NKDF+ SD+IR
Sbjct: 422 LFEVLGLQNNDSETS----QDGEKLAAAVEL-------LIQLRNQARANKDFAMSDKIRD 470
Query: 189 DLTRKGIALMDVRKETIWR 207
+L+ KGI L D + T ++
Sbjct: 471 ELSTKGIQLNDGKDGTTFQ 489
>gi|363900515|ref|ZP_09327020.1| cysteinyl-tRNA synthetase [Oribacterium sp. ACB1]
gi|395209141|ref|ZP_10398306.1| cysteine--tRNA ligase [Oribacterium sp. ACB8]
gi|361956389|gb|EHL09707.1| cysteinyl-tRNA synthetase [Oribacterium sp. ACB1]
gi|394705742|gb|EJF13268.1| cysteine--tRNA ligase [Oribacterium sp. ACB8]
Length = 472
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F +M DDLNT+ +T F + ++ N++ K+ + I ++ + V++ VLG+
Sbjct: 357 FSEKMEDDLNTADAITQIF-ELVRLANSTVKEESSKDFGSI-----MKESIAVLVHVLGI 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ K K E E V LI +R AKKNKDF+++D+IR +L GI
Sbjct: 411 ------------RTDKKEEKLDEGLEEKVNALIVKRQEAKKNKDFTEADRIRDELLSMGI 458
Query: 196 ALMDVRKETIWR 207
+L D R W+
Sbjct: 459 SLKDTRNGVEWQ 470
>gi|415715928|ref|ZP_11466234.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 1400E]
gi|388057745|gb|EIK80559.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 1400E]
Length = 527
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN-EVKVV 129
L ++F M+DD+N S L F A++ N Q Q I+SLLK +V+ +
Sbjct: 382 NLPEDFTKAMNDDINVSGALAAIFT-AIRSGNALLDDYAQGQNDSIKSLLKTCILQVRAM 440
Query: 130 LDVLGLLPEGSTYSEVLQ--QLKDKALKRAELAENDVL-----HLIEERATAKKNKDFSK 182
LD LGL P + Q Q + AE+ VL + +E+R A+ KDF++
Sbjct: 441 LDTLGLDPYSPQWRSNAQKSQYFGEDANNGASAEHKVLESLIANQLEQRTIARAAKDFAR 500
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D IR LT G+ + D + + W
Sbjct: 501 ADAIRDSLTAAGVVIEDSAQGSSWH 525
>gi|297242895|ref|ZP_06926833.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889106|gb|EFH27840.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 545
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
+L ++F M+DD+N S + F I++ K Q Q ++ L+ + +V
Sbjct: 398 ELPEDFTRAMNDDINVSGAIAEIFTTIRQGNALIDDCSKDSSQAQSESVQKLIYLAVLQV 457
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI-----EERATAKKNKDFS 181
+ +LD LGL P T++ Q + E E L + + RA A+K KDF+
Sbjct: 458 RAMLDTLGLDPYAKTWASNDNQSSAEGSNGKESKEYSALDSLITLQLKARADARKAKDFA 517
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
+D IR L GI ++D + + W
Sbjct: 518 TADAIRDALNNAGIVIVDTSQGSSWH 543
>gi|366087751|ref|ZP_09454236.1| cysteinyl-tRNA synthetase [Lactobacillus zeae KCTC 3804]
Length = 468
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 52 FQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
++ D + P + ++ L+D+F T M DD+N + LT F D K +N + +
Sbjct: 333 YRRDNAVPGVDPKITEQLQTLKDQFITAMDDDVNVQNGLTVLF-DLAKLLNEYANEDTVK 391
Query: 112 QLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEER 171
+ ESL + N L + G++ T + D+ L++ R
Sbjct: 392 R----ESLDDLLNLYDAWLQIFGVVFADQTNLDA-----------------DIDALVKAR 430
Query: 172 ATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ KDF+KSDQIR L +GI L D + T WR
Sbjct: 431 DVARAAKDFAKSDQIRDQLAAQGIILEDTPQGTRWR 466
>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|423439732|ref|ZP_17416638.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450111|ref|ZP_17426989.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423467989|ref|ZP_17444757.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423537389|ref|ZP_17513807.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423543117|ref|ZP_17519505.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423626968|ref|ZP_17602743.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|401126734|gb|EJQ34468.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401166817|gb|EJQ74117.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401250163|gb|EJR56467.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|402411856|gb|EJV44219.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402421913|gb|EJV54157.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402459095|gb|EJV90833.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 465
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|300770934|ref|ZP_07080811.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762207|gb|EFK59026.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
Length = 488
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 61 ITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLS 114
ITP+ ++ +R Y M DD N S IL + ++ IN + K Q+ L
Sbjct: 354 ITPSKATSGFNLEDIRKNCYAAMDDDFN-SPILIAELFEVVRIINSIYDGKSTINQKGLD 412
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
+++ +K V D+LGL + + ++ + +L + +I R +A
Sbjct: 413 ELKAFMK-----DFVEDILGLNDDSNAGTDNMDELMNV--------------IINIRNSA 453
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
K+NKDF+ SD+IR +L+ GI L D + T+W
Sbjct: 454 KQNKDFATSDRIREELSSIGIQLKDSKDGTLW 485
>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 302 MEKFQAAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIEAYVK---QL 354
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 355 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 397
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 398 RDDLKERNIILEDTAQGTRWK 418
>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 42 LQDCEVALSPFQEDARSGSITPAA-EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
L++C L F + R S A+ + +++ R++F M DD NT+ L GA + +K
Sbjct: 319 LRNCWSDLQ-FAKSRRDLSYDDASLSEAVRQGREDFEEAMDDDFNTAGAL-GAVFEVVKA 376
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N K ++ K +++ V+ +LGL E +E+
Sbjct: 377 VNTHLKSSGALSGKGLDDAEKFFRDIEEVMGLLGLSHETDGDAEIDA------------- 423
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+E+R A+K K+F++SD++R +L +GI L D + T W+
Sbjct: 424 ------LVEQRNAARKAKNFAESDRLRDELAARGIVLEDTPQGTKWK 464
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ L+ D + IN +++Q + + ++ + LL DVLGL
Sbjct: 344 FKAAMDDDFNTALALS-VMADVRQAINKAREQAQSEAVAYLAGLLS------SFGDVLGL 396
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAEN---DVLHLIEERATAKKNKDFSKSDQIRADLTR 192
QQ DK L ++ D+ L+ ER A+ +K+++++D+IR LT
Sbjct: 397 F----------QQDADKFLTGDSSSDQLAVDIDSLVAERNQARADKNWARADEIRDQLTE 446
Query: 193 KGIALMDVRKETIWR 207
GI L D +T WR
Sbjct: 447 MGIVLEDAAGKTSWR 461
>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 420
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ L G D ++ +N + + + L + I+ V VLGL
Sbjct: 355 FREAMDDDFNTAQAL-GYVFDLVRAVNRVLAEGEIDRAVLASAREAIDR----VGAVLGL 409
Query: 136 L-PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
E + E L+ K AL E AE + LIEER A+K +DF ++D+IR L +G
Sbjct: 410 FTSEPGAFVERLKSRKAAALP-IEAAE--IERLIEERNAARKARDFRRADEIRDTLAAQG 466
Query: 195 IALMDVRKETIWR 207
I L+D + T W+
Sbjct: 467 ILLLDSAQGTTWK 479
>gi|417002513|ref|ZP_11941896.1| cysteine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479181|gb|EGC82278.1| cysteine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 472
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K ++ F M DDLNT+ +T F D KFIN K + + E L K + K
Sbjct: 353 LDKFKENFIEVMDDDLNTADAITVLF-DMAKFIN-----TKLSETTSKEVLEKTFDLYKD 406
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ LGL+ + ++ D ++R E LIE+R+ AKKNKDF+ +D IR
Sbjct: 407 LFASLGLVAK--------KKEVDVDVERIE-------ELIEKRSLAKKNKDFATADAIRD 451
Query: 189 DLTRKGIALMDVRKETIW 206
LT GI + D R+ W
Sbjct: 452 VLTAMGITIKDTREGVKW 469
>gi|365825813|ref|ZP_09367764.1| cysteinyl-tRNA synthetase [Actinomyces graevenitzii C83]
gi|365257681|gb|EHM87713.1| cysteinyl-tRNA synthetase [Actinomyces graevenitzii C83]
Length = 494
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
EF M DDLN + +T ALK +N + + + + + + + N+++V+LD+LG
Sbjct: 362 EFRAAMDDDLNLAGAMT-QIHAALKRLNVALTEAEAGKGEAAQ-VAEAANQLRVMLDILG 419
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L P ++ ++ N V +L+E+RA+A+K KD+ ++D IR L G
Sbjct: 420 LDPLSPVWARAGVSEENADNAALAALGNLVENLLEQRASARKEKDWGRADAIRDALASAG 479
Query: 195 IALMDVRKETIWR 207
+ + D W
Sbjct: 480 VVVEDSPTGARWH 492
>gi|423387424|ref|ZP_17364678.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|423526612|ref|ZP_17503057.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|401629007|gb|EJS46835.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|402455652|gb|EJV87433.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
Length = 465
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIDALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
Length = 420
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 302 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 353
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 354 LETLFDILGL-----------------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQ 396
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 397 IRDDLKDRNIILEDTAQGTRWK 418
>gi|227510715|ref|ZP_03940764.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227189836|gb|EEI69903.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 468
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+A +GS P E ++++ +F M DD N + + + + KF N ++ +
Sbjct: 336 HNAEAGS-DPKTEQEVRQIVADFIDAMDDDFNVQNGIAAVY-ELAKFAN----MYSERDV 389
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
SL I N +K + V G+ L+++EL ++++ LI ER
Sbjct: 390 VFQNSLQFIINTLKQLAAVFGI-----------------KLEQSELKDDEIWALIHERQQ 432
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ NKDF +SD+IR +L +GI L D + T +R
Sbjct: 433 ARANKDFIRSDEIREELKARGIVLEDTPQGTRFR 466
>gi|386392149|ref|ZP_10076930.1| cysteinyl-tRNA synthetase, partial [Desulfovibrio sp. U5L]
gi|385733027|gb|EIG53225.1| cysteinyl-tRNA synthetase, partial [Desulfovibrio sp. U5L]
Length = 246
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ KL + F M DDLNT+ + F + + + K K ++ + E+L +I ++
Sbjct: 108 LAKLEEGFTAAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAA--EALRRILADL 165
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+LG+ G E L +LK L R + V L+ ER A+K KDF++SD I
Sbjct: 166 DTWSGILGVF--GRDSREFLAELKASRLARLGIDAVRVDGLVAERQEARKTKDFARSDAI 223
Query: 187 RADLTRKGIALMDVRKETIW 206
R +L G+ +MD W
Sbjct: 224 RDELAGLGVTVMDTPAGPQW 243
>gi|224025545|ref|ZP_03643911.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
18228]
gi|224018781|gb|EEF76779.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
18228]
Length = 492
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 61 ITPA-AEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLS 114
ITPA A I + LR++ Y M+DDLNT +++ F DA + IN + K + L
Sbjct: 354 ITPAKATSGIEPQGLREKCYEAMNDDLNTPIVISHLF-DATRMINTVIDKKATISAEDLE 412
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
++S+ + V D+LGL E + R E V L+E+R A
Sbjct: 413 ELKSVFHL-----FVFDLLGLKAEAENNA-----------AREEAYGKVVDMLLEQRMQA 456
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K NKD++ SD+IR +L G + D + W+
Sbjct: 457 KANKDWATSDKIRDNLAALGFEVKDTKDGFTWK 489
>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 447
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D EV L + +D ++ D F M DD NT++ +T F D K+I
Sbjct: 311 IHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAFQVAMDDDFNTANGVTVLF-DMAKWI 369
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N+ +++ + +L V G++ E EVL +
Sbjct: 370 NSGNYDET------------VKDAFEKMLQVFGIVFE----EEVLDE------------- 400
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
D+ LIEER A+ NKDF+ +D+IR +L +GI L+D ++ W
Sbjct: 401 -DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F T M+DD NT L A K IN +++ + + L L + + +L +L
Sbjct: 342 FLTAMNDDFNTPEAL-AALFSLSKEINILRRKKVSEAIPLASELRR----LGNLLGLLQA 396
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
PE T+ + Q K+ L E+ + LI ER A+KN+DF+ +DQIRADLT KGI
Sbjct: 397 KPE--TFLQGTSQEKEPGLSVTEIEQ-----LIVERIDARKNRDFATADQIRADLTAKGI 449
Query: 196 ALMDVRKETIWR 207
L D + T WR
Sbjct: 450 ILEDNAQGTSWR 461
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| cysteine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 470
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 27/157 (17%)
Query: 55 DARSGSITPAAE---DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ 111
+ + G +T A D K+ +F M DD NT++ ++ F + +KF N++ + +
Sbjct: 333 NGKDGKVTDAEAKLLDEAKEYITKFEEAMDDDCNTANAISAVF-ELVKFANSNLNEGSTK 391
Query: 112 QLS--LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIE 169
+ + + E L K+ N VLG++ E +++ D E+ + +I
Sbjct: 392 EFAAGVYEILDKLCN-------VLGIILEKEE-----EKVGD---------EDYIEEMIA 430
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+RA AKK++DF+ +DQIR +L KGI L D R+ T W
Sbjct: 431 KRAQAKKDRDFAMADQIRDELAAKGIVLKDTREGTKW 467
>gi|374584939|ref|ZP_09658031.1| cysteinyl-tRNA synthetase [Leptonema illini DSM 21528]
gi|373873800|gb|EHQ05794.1| cysteinyl-tRNA synthetase [Leptonema illini DSM 21528]
Length = 513
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 23/151 (15%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS--KKQPKQQQLSLIES 118
+ P +++ + + EF M DDLN S L AF + L N + ++ K++ +
Sbjct: 384 LAPHSKEAAQSIH-EFIEAMDDDLNISKALAAAF-EMLPRANTALDREAAKEELTDFLIV 441
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
L +++ V GLL + ++A K A L+ +++ IE+R A+K K
Sbjct: 442 LYGMDS-------VFGLL-----------RFHEEA-KSASLSADEIEGWIEKRNDARKRK 482
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWRPC 209
DF+++D+IR +L KGI + D K T W P
Sbjct: 483 DFAEADRIRDELLAKGIVIKDTPKGTTWEPA 513
>gi|291563603|emb|CBL42419.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
Length = 469
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 22/128 (17%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEG 139
M DD NT+ ++ F + +K N++ S E + ++NE++ + DV+G++ E
Sbjct: 362 MDDDFNTADAISAIF-ELIKLSNST-----VSGASTKEYVSWMKNEIQRLCDVMGIITE- 414
Query: 140 STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
K+AE+ +++V LI +R A+K K+F+ +D+IR L GI L D
Sbjct: 415 ---------------KKAEVLDSEVEDLIAQRQAARKAKNFALADEIRGKLLDMGIVLED 459
Query: 200 VRKETIWR 207
R+ W+
Sbjct: 460 TREGVKWK 467
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF--LDAL 98
TL++ VA+S + R A + I+ R +FY M DD NT+ L F +A+
Sbjct: 322 TLENIRVAMSKAEISFRWDEPEFRAYEAIRDARKKFYEAMDDDFNTAEALKAVFEVSNAI 381
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEV-KVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
++PK ES+L+ E K V +V GL + + ++ K
Sbjct: 382 NRYLTEVEKPK-------ESILRKAWEFFKDVGEVFGL------FEDYFKEQK------- 421
Query: 158 ELAEND---VLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AEND + L+E RA +K K F +D+IR +L + GI L D + T+W+
Sbjct: 422 --AENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLEDTPQGTVWK 472
>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
Length = 440
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 322 MEKFQAAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKIVIEAYVK---QL 374
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 375 ETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQI 417
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 418 RDDLKERNIILEDTAQGTRWK 438
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 18 LLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFY 77
++ +F L+ + S YTG+ L + L R PAA + R+ F
Sbjct: 288 VVRLFLLSSHYRSPLNYTGD---ALDEARGGLERLYNALRG---LPAAAPARSQARERFR 341
Query: 78 TRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
M DD NT L D + IN ++ + + L+ E+ VL +L P
Sbjct: 342 EAMDDDFNTREALA-VLFDGAREINRLREAGDASGAASAAAELR---ELGAVLGLLQQDP 397
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
E +V A+ ++ L+ +R A+K KDF+++D+IR +L +GI L
Sbjct: 398 EAYLRGDV-----------ADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIEL 446
Query: 198 MDVRKETIWR 207
D + T WR
Sbjct: 447 EDTPEGTKWR 456
>gi|150401798|ref|YP_001325564.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
gi|187631641|sp|A6UWT0.1|SYC_META3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150014501|gb|ABR56952.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
Length = 479
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDAL-- 98
T+Q+ VA + + I + I ++FYT M D+ NT+ L F +
Sbjct: 320 TIQNITVAFRNSEIKYKLNEIDKNTIETIHNCTEKFYTAMDDNFNTAQALKYVFEVSTAI 379
Query: 99 -KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
K+INN + S+I LK K+V ++ G+ +
Sbjct: 380 NKYINNYANSDELPNYSII---LKSYEFFKMVGEIFGIFGSSTI----------NTATNT 426
Query: 158 ELAENDVLH-LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+AE ++++ L+E RA KK K+++ SD+IR L I L D K TIW+
Sbjct: 427 NIAEENLINILMELRADLKKEKNYNLSDKIRDKLKEMDIILEDSPKGTIWK 477
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 28/168 (16%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
++D + L ++ + S PA + ++ +F RM DD +T+ L GA + +K +
Sbjct: 319 IKDFLINLKNYKNETSKSS--PALKKTLENAIKDFEKRMDDDFDTAGGL-GALYNLIKEV 375
Query: 102 NNSKKQPKQQQLSLIES-LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N K L E+ KIE +K + VL +LPE E +
Sbjct: 376 NILMKNG-----DLAETDKEKIETTLKKIDSVLCILPE------------------VETS 412
Query: 161 EN-DVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
N +V + I+ R A+KNKDF+ +D+IR DL +GI L D + TIW+
Sbjct: 413 VNPEVENAIKARTDARKNKDFALADKIRKDLESQGIILEDTPQGTIWK 460
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 62 TPAAEDCIKKLRD---EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+P E+ +K+L D F M+DDLNT+ L G A++ + ++
Sbjct: 337 SPFPEELVKELDDLEKHFAEAMADDLNTAGAL-GHVFSAIRLAGRVAEDKNLRKSEGGRD 395
Query: 119 LL-KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
L +I+ ++ VLG+ +E L +L+D RA + V L++ RA A+K+
Sbjct: 396 LFARIKADMADWASVLGIFERKP--AEFLLELRDSRAARAGIDPAKVRELLDARAQARKD 453
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF++SD IR +L + + D + W
Sbjct: 454 KDFARSDAIRDELAAMQVEVHDTPQGATW 482
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 22 FWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMS 81
F L+ + S Y+ T L + AL R T A+ R+ F M
Sbjct: 293 FLLSSHYRSPLNYS---TSDLDNSRAALERLYLALRDLPFTEASPALAAPYREAFRQAMD 349
Query: 82 DDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGST 141
DD NT L D + IN + + + Q +L +L ++ + + + +G
Sbjct: 350 DDFNTPLALA-VLFDLAREINRRRDRFESQAAALAATLRELGGLLGLAQVAPEVFLKGGA 408
Query: 142 YSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVR 201
S V +A V L+ ERA A+KN+DF+ +D+IR +L +GIAL D
Sbjct: 409 GSSVA----------VGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDTP 458
Query: 202 KETIWR 207
+ T WR
Sbjct: 459 QGTAWR 464
>gi|347524097|ref|YP_004781667.1| cysteinyl-tRNA synthetase [Pyrolobus fumarii 1A]
gi|343460979|gb|AEM39415.1| cysteinyl-tRNA synthetase [Pyrolobus fumarii 1A]
Length = 481
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 21/136 (15%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNS-KKQPKQQQLSLIESLLKIENEVKVVLD-- 131
EF+ MS+D NT+ L A + F+N+ +P L+L + NEV + D
Sbjct: 361 EFHKAMSNDFNTAKALA-AINKLVSFVNSELSSKPIYTALTLAYRAFREFNEVFAIADDI 419
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+ G+ P +EV QL D+ + D++ +E RA +K KD+ +D IRA+L
Sbjct: 420 ITGVAP-----AEV--QLVDRLV--------DLI--VEVRAKLRKRKDYELADWIRAELG 462
Query: 192 RKGIALMDVRKETIWR 207
+ GI L+D ++T+WR
Sbjct: 463 QLGIRLLDYGEKTVWR 478
>gi|373465965|ref|ZP_09557391.1| cysteine--tRNA ligase [Lactobacillus kisonensis F0435]
gi|371758224|gb|EHO46998.1| cysteine--tRNA ligase [Lactobacillus kisonensis F0435]
Length = 395
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
P + ++++ +F M DD N + + + + KF N + Q+ S+ I
Sbjct: 269 PKTDQEVRQIIADFTDAMDDDFNVQNGIAAVY-ELAKFANTYS----EHQVVFTGSIQFI 323
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
N +K + + G+ L+++EL ++++ LI ER A+ NKDF +
Sbjct: 324 INTLKQLAGIFGI-----------------KLEQSELKDDEIWKLIHERENARHNKDFIR 366
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
SD+IR +L +GI L D + T +R
Sbjct: 367 SDEIREELKARGIVLEDTPQGTRFR 391
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I+K + F M DD N+++ + F D ++ N + K ++E+ LK +++
Sbjct: 347 IRKEGERFIASMDDDFNSANAVAVMF-DLVRQANIYLTE-KHTSKEVLEAFLKQFDDMAF 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKR-AELAENDVLHLIEERATAKKNKDFSKSDQIR 187
VL + A+KR AEL + DV LIEER A+K++DF+++D+IR
Sbjct: 405 VLGI--------------------AVKRQAELLDEDVEQLIEERIQARKDRDFARADEIR 444
Query: 188 ADLTRKGIALMDVRKETIWR 207
L +GI L D + T W+
Sbjct: 445 DSLKDQGIILEDTPQGTRWK 464
>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
Length = 465
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + +L + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEDLLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKNRNIILEDTAQGTRWK 463
>gi|49482759|ref|YP_039983.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295427067|ref|ZP_06819703.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|418581205|ref|ZP_13145288.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418891133|ref|ZP_13445250.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896915|ref|ZP_13450988.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899879|ref|ZP_13453938.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908284|ref|ZP_13462292.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|418916339|ref|ZP_13470302.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922162|ref|ZP_13476079.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418981397|ref|ZP_13529112.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985030|ref|ZP_13532720.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749424|sp|Q6GJD9.1|SYC_STAAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49240888|emb|CAG39555.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295128855|gb|EFG58485.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|377704961|gb|EHT29269.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377707217|gb|EHT31510.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708162|gb|EHT32453.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377711989|gb|EHT36212.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377732090|gb|EHT56141.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377735485|gb|EHT59515.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377751691|gb|EHT75619.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377755623|gb|EHT79521.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|377761694|gb|EHT85563.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 466
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSK--KADELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229558624|sp|B2UY90.1|SYC_CLOBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 470
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 30/145 (20%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAF---LDALKFIN-NSKKQPKQQQLSLIESLLKI 122
+ + K R+++ +M DD NT+ LT F D IN NS K+ + L LI L
Sbjct: 349 NSLNKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALDLIRELGA- 407
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
LGLL Q++ +L E+++ LI++R A+KNKDF+
Sbjct: 408 ---------PLGLL----------QKITKGSL------EDEIESLIQQRQDARKNKDFAL 442
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
SD+IR DL +GI L D + W+
Sbjct: 443 SDKIRDDLKDRGIVLEDTPQGVRWK 467
>gi|407007122|gb|EKE22871.1| hypothetical protein ACD_6C00698G0001, partial [uncultured
bacterium]
Length = 354
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F T M DD NT + + K +N + K+ +Q ++ + L+ + ++L
Sbjct: 229 ERFNTAMCDDFNTPEAIA-VLFEINKELNRAVKEENAEQAAIYYATLRH------LTNIL 281
Query: 134 GLLPEGSTYSEVLQQLKDKALKRA-ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
GL+ + +V + LK + A L+ + LI++R AKK K+F+++D+IR L
Sbjct: 282 GLVQQ-----DVEEFLKSDIGQEALGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLD 336
Query: 193 KGIALMDVRKETIWR 207
+G+ L D R+ T+WR
Sbjct: 337 QGVVLEDTRQGTVWR 351
>gi|423405186|ref|ZP_17382359.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423462636|ref|ZP_17439430.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|423480029|ref|ZP_17456743.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401130815|gb|EJQ38471.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401645556|gb|EJS63211.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402424013|gb|EJV56209.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 465
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + IE VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIEAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEVLIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|297590580|ref|ZP_06949219.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|384868546|ref|YP_005748742.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|415684085|ref|ZP_11449240.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS00]
gi|417889306|ref|ZP_12533397.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|418566056|ref|ZP_13130445.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|418595439|ref|ZP_13159053.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
gi|418601636|ref|ZP_13165056.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|297576879|gb|EFH95594.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|312439051|gb|ADQ78122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193893|gb|EFU24287.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS00]
gi|341851716|gb|EGS92627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|371971930|gb|EHO89322.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|374398055|gb|EHQ69253.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|374401578|gb|EHQ72644.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
Length = 466
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSK--KADELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 53 QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTS----HILTGAFLDALKFINNSKKQP 108
+E SG + + + LR F M DD+NT+ H+ T L A + ++N ++
Sbjct: 331 REKWTSGPLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFTMVRL-ANRILDNKGQRK 389
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+ L +L VL V G P +E L +L+ + R + V L+
Sbjct: 390 TEGARELFRRVLDEARAWTAVLGVFGRDP-----AEFLAELRACRVARKSIDPARVEELM 444
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ R A+ +KDF+++D IR ++ GI + D +W
Sbjct: 445 QARINARADKDFARADAIRDEIAALGIEVRDTPSGAVW 482
>gi|347532519|ref|YP_004839282.1| cysteinyl-tRNA synthetase [Roseburia hominis A2-183]
gi|345502667|gb|AEN97350.1| cysteinyl-tRNA synthetase [Roseburia hominis A2-183]
Length = 475
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 24/138 (17%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALK--FINNSKKQPKQQQLSLIESLLKIENEVKVV 129
+++F +S+DLNTS +T + D LK +N++ K+ +L E
Sbjct: 358 YKEKFCDAISNDLNTSMAITIVY-DLLKDDTLNDATKR------ALAE------------ 398
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
D G+L T ++V +D + AEL E +L IEER AKK KDF+K+D IR D
Sbjct: 399 -DFDGVLSLNLTTAKVENPAEDTEVD-AEL-EAYILEKIEERKAAKKEKDFAKADAIRDD 455
Query: 190 LTRKGIALMDVRKETIWR 207
L KGI L D R+ IW
Sbjct: 456 LLAKGIVLKDTREGVIWH 473
>gi|167764089|ref|ZP_02436216.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
43183]
gi|167698205|gb|EDS14784.1| cysteine--tRNA ligase [Bacteroides stercoris ATCC 43183]
Length = 491
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQLSLIESLLKIENE 125
+K LR E Y M+DDLN+ I+ D + INN + L ++ +
Sbjct: 364 VKTLRAECYEAMNDDLNSP-IVIAHLFDGARMINNIIAGNDTITAEDLKELKETFHL--- 419
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
D+LGL E ++ E ++ A + V L+ ER AK NKD++ SD+
Sbjct: 420 --FCFDILGLKEENTSNEE-----REAAFGKV------VDMLLAERIKAKANKDWATSDK 466
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR +LT G A+ D + W+
Sbjct: 467 IRDELTALGFAIKDTKDGCEWK 488
>gi|60679757|ref|YP_209901.1| cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
gi|423269937|ref|ZP_17248909.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
gi|423272608|ref|ZP_17251555.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
gi|423282529|ref|ZP_17261414.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 615]
gi|81317170|sp|Q5LIT7.1|SYC_BACFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|60491191|emb|CAH05939.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
gi|392700783|gb|EIY93945.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
gi|392708685|gb|EIZ01790.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
gi|404582097|gb|EKA86792.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 615]
Length = 491
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E LS E S ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGLSRLMEAVDSLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DGA 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKRA 157
K INN ++ L ++ + D+LGL E GS+ ++ A +
Sbjct: 393 KMINNIIAGNNTISADDLKDLKEVFH--TFCFDILGLKEEIGSS------DGREAAYGKV 444
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 445 ------VDMLLEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|374307676|ref|YP_005054107.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
gi|291166310|gb|EFE28356.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
Length = 466
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 59 GSITPAAEDCIKKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
G I ++ + KL R+ F M DDLNT+ ++ F + KFIN + + ++
Sbjct: 333 GMIKEDEKEFVSKLPSYRELFIEAMDDDLNTADGISAIF-ELSKFINTTVSEKSSKEY-- 389
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
++ + I E+ VL+++ Q+ K ++ E LIE+R+ AK
Sbjct: 390 LQECMNIFCELTNVLNII-------------QKKKSDGFDEDKINE-----LIEQRSLAK 431
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K K+F+++D+IR L G+ ++D R+ T W+
Sbjct: 432 KEKNFAEADRIRGQLHDMGVEVLDTRQGTTWK 463
>gi|423381863|ref|ZP_17359146.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423543577|ref|ZP_17519935.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401187742|gb|EJQ94814.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401628489|gb|EJS46330.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
Length = 465
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|336392006|ref|ZP_08573405.1| cysteine--tRNA ligase [Lactobacillus coryniformis subsp. torquens
KCTC 3535]
Length = 468
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
LS Q+D +G I E + KL F T M DD N + +T
Sbjct: 331 LSYRQKDVSAG-IDTEVEQQLTKLTKAFTTAMDDDFNVQNGMT----------------- 372
Query: 109 KQQQLSLIESLLKIENEVKVVLDVL--GLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
++ + L+ I +E K+V + L+ +T+ ++ K A L ++++
Sbjct: 373 ---EIYELAKLMNIYSEQKIVREATLNHLMDSFTTWLQIF----GVDFKPAGLLDDEIEQ 425
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LI+ER A+ NKD+ +SD+IR L +GI L D + T WR
Sbjct: 426 LIQERIDARTNKDYQRSDEIRDLLKAQGIVLEDTAQGTRWR 466
>gi|333394599|ref|ZP_08476418.1| cysteine--tRNA ligase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 468
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
LS Q+D +G I E + KL F T M DD N + +T
Sbjct: 331 LSYRQKDVSAG-IDTEVEQQLTKLTKAFTTAMDDDFNVQNGMT----------------- 372
Query: 109 KQQQLSLIESLLKIENEVKVVLDVL--GLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
++ + L+ I +E K+V + L+ +T+ ++ K A L ++++
Sbjct: 373 ---EIYELAKLMNIYSEQKIVREATLNHLMDSFTTWLQIF----GVDFKPAGLLDDEIEQ 425
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LI+ER A+ NKD+ +SD+IR L +GI L D + T WR
Sbjct: 426 LIQERIDARTNKDYQRSDEIRDLLKAQGIVLEDTAQGTRWR 466
>gi|420153629|ref|ZP_14660580.1| cysteine--tRNA ligase [Actinomyces massiliensis F0489]
gi|394758610|gb|EJF41481.1| cysteine--tRNA ligase [Actinomyces massiliensis F0489]
Length = 567
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 35 TGNETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF 94
+G++T D VA+SP P E + L DE+ M DDL + + A
Sbjct: 409 SGSDT----DGAVAVSPVD--------APPQEVRARPLPDEYVAAMDDDLGLAGAM--AV 454
Query: 95 LDA-LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTY-SEVLQQLKDK 152
+ A LK +N++ P ++ +++ + L + ++ LDVLGL P + S VL +
Sbjct: 455 VHATLKRLNSALAAPTPERDAVVGAALDLRSQ----LDVLGLDPLAEPWRSRVLGGSEAG 510
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ + ++ V L+++RA A+ KD+ ++D +R +LT G+ + D W
Sbjct: 511 SDSAMDALDHLVTALLDQRAEARAAKDWPRADALRDELTAAGVVVEDSTAGARWH 565
>gi|53711487|ref|YP_097479.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|336407687|ref|ZP_08588183.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
gi|61216162|sp|Q64ZY1.1|SYC_BACFR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52214352|dbj|BAD46945.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|335944766|gb|EGN06583.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
Length = 491
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E LS E S ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGLSRLMEAVDSLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DGA 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GST------YSEVLQQLKD 151
K INN ++ L ++ + D+LGL E GS+ Y +V+ L
Sbjct: 393 KMINNIIAGNNTISADDLKDLKEVFH--TFCFDILGLKEEIGSSDGREAAYGKVVDML-- 448
Query: 152 KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 449 ----------------LEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|23464902|ref|NP_695505.1| cysteinyl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|61216350|sp|Q8G7G5.1|SYC_BIFLO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|23325493|gb|AAN24141.1| cysteinyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
Length = 546
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 410 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 464
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P +E A AE E+ L LI E RA A+K KDF+K+
Sbjct: 465 MLDTLGLDP----LAEPWVSAGGAADGTAESPEHAALEALIAEQLNARAEARKAKDFAKA 520
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 521 DQIRDALTEAGIAIEDGPQGSTW 543
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 74 DEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+ F M DD NT+ L F A + + K + L L + + ++ V
Sbjct: 354 ERFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRAL-----LAEARDRIRKVG 408
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VLG+ S ++LK++ + ++ LI ER A+ N+DF ++D+IR L
Sbjct: 409 AVLGIFT--SEPRAFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSL 466
Query: 191 TRKGIALMDVRKETIWR 207
KGI L+D + T W+
Sbjct: 467 AAKGIMLLDSPQGTTWK 483
>gi|257424643|ref|ZP_05601070.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427311|ref|ZP_05603710.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429947|ref|ZP_05606331.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432649|ref|ZP_05609009.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257435553|ref|ZP_05611601.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282903117|ref|ZP_06311008.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282904907|ref|ZP_06312765.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907857|ref|ZP_06315692.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910170|ref|ZP_06317974.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913362|ref|ZP_06321151.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282918317|ref|ZP_06326054.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282923279|ref|ZP_06330959.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|283957327|ref|ZP_06374780.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500408|ref|ZP_06666259.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509353|ref|ZP_06668064.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
gi|293523940|ref|ZP_06670627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|257272213|gb|EEV04336.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275504|gb|EEV06977.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279144|gb|EEV09745.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282064|gb|EEV12199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284744|gb|EEV14863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282314147|gb|EFB44537.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|282317451|gb|EFB47823.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282322394|gb|EFB52716.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282325562|gb|EFB55870.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328241|gb|EFB58519.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331732|gb|EFB61243.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596072|gb|EFC01033.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|283790778|gb|EFC29593.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920903|gb|EFD97964.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|291095413|gb|EFE25674.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467450|gb|EFF09965.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
Length = 471
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSK--KADELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|415723289|ref|ZP_11469463.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
gi|388063739|gb|EIK86308.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
Length = 549
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L ++F M+DD+N S L F +++ + Q I++LLK +V
Sbjct: 400 NLPEDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQSQDNSQNDSIKNLLKTCVLQV 459
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA-------ENDVLHLIEERATAKKNKD 179
+ +LD LGL P + Q+ +D + A E+ + + +E+RA A+ KD
Sbjct: 460 RAMLDTLGLDPYSPQWRSNAQKSQDLGTDANDGASAEHKALESLITNQLEQRAIARAAKD 519
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
F+++D IR LT GI + D + + W
Sbjct: 520 FARADAIRDSLTAAGIVIEDSAQGSSWH 547
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ L G D ++ +N + + + L + I+ V VLGL
Sbjct: 355 FREAMDDDFNTAQAL-GYVFDLVRAVNRVLAEGEIDRAVLASAREAIDR----VGAVLGL 409
Query: 136 L-PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
E + E L+ K AL E AE + LIEER A+K +DF ++D+IR L +G
Sbjct: 410 FTSEPGAFVERLKSRKAAALP-IEAAE--IERLIEERNAARKAQDFRRADEIRDTLAAQG 466
Query: 195 IALMDVRKETIWR 207
I L+D + T W+
Sbjct: 467 ILLLDSAQGTTWK 479
>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
Length = 420
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 302 MEKFQAAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIEAYVK---QL 354
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 355 ETLFDILGL-----------------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQI 397
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 398 RDDLKERNIILEDTAQGTRWK 418
>gi|296453539|ref|YP_003660682.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
JDM301]
gi|296182970|gb|ADG99851.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
JDM301]
Length = 546
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 410 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 464
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P +E A AE E+ L LI E RA A+K KDF+K+
Sbjct: 465 MLDTLGLDP----LAEPWVSAGGAADGTAESPEHAALEALIAEQLNARAEARKAKDFAKA 520
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 521 DQIRDALTEAGIAIEDGPQGSTW 543
>gi|375356539|ref|YP_005109310.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis 638R]
gi|383116503|ref|ZP_09937251.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|423248164|ref|ZP_17229180.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
gi|423253113|ref|ZP_17234044.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
gi|423259453|ref|ZP_17240376.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
gi|423263573|ref|ZP_17242576.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
gi|251948227|gb|EES88509.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|301161219|emb|CBW20757.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis 638R]
gi|387777033|gb|EIK39133.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
gi|392657013|gb|EIY50650.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
gi|392660271|gb|EIY53885.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
gi|392706995|gb|EIZ00115.1| cysteinyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
Length = 491
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E LS E S ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGLSRLMEAVDSLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DGA 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKRA 157
K INN ++ L ++ + D+LGL E GS+ ++ A +
Sbjct: 393 KMINNIIAGNNTISADDLKDLKEVFH--TFCFDILGLKEEIGSS------DGREAAYGKV 444
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 445 ------VDMLLEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|229100889|ref|ZP_04231693.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
gi|228682468|gb|EEL36541.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
Length = 254
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 136 MEKFQAAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIEAYVK---QL 188
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 189 ETLFDILGL-----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQI 231
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 232 RDDLKERNIILEDTAQGTRWK 252
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 16/129 (12%)
Query: 80 MSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE 138
M DD NT+ + A L A+ IN+ +++ ++ ++L V++ VLGLL +
Sbjct: 346 MDDDFNTAGAI--AVLHAVANDINHYRREGDEEAAKRSAAVL-----VRLGA-VLGLLQQ 397
Query: 139 GSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
E Q A +EL D+ +I+ RA A+K KDF+++D+IR DL KGI L
Sbjct: 398 NP---EAFFQ----ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILD 450
Query: 199 DVRKETIWR 207
D R+ T WR
Sbjct: 451 DSREGTTWR 459
>gi|366089456|ref|ZP_09455929.1| cysteinyl-tRNA synthetase [Lactobacillus acidipiscis KCTC 13900]
Length = 469
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA+ G++ P + + EF M DD N + + +
Sbjct: 336 QDAKQGAVDPTVQKEFQDHEAEFEAAMDDDFNAQNGIAVVY------------------- 376
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
L++ L + +V L L +G + +++ K LK A++ +++V IE+R
Sbjct: 377 ELVKQLNIYAAKEEVTATTLQYLLDG--FEKIVGVFGIK-LKHADILDDEVETKIEQRNA 433
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KNKDF+ SDQIR +L +GI L D + T W+
Sbjct: 434 ARKNKDFALSDQIRDELKEQGIILEDTPQGTRWK 467
>gi|445370707|ref|ZP_21425909.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
gi|445385631|ref|ZP_21427618.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444751595|gb|ELW76317.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444751623|gb|ELW76343.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
Length = 447
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQAAMDDDFNTANGVTVLF-DMAKWINSGNYDE------------TVKDAFEKILQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E T E D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFEEETLDE------------------DIEKLIEERQAARSNKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|160937871|ref|ZP_02085229.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
BAA-613]
gi|158439097|gb|EDP16851.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
BAA-613]
Length = 469
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 24/138 (17%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ-LSLIESLLKIENEVKVV 129
KLR ++ M DD NT+ ++ F + +K N + + ++ +S ++++ ++ +
Sbjct: 353 KLRGKYEEAMDDDFNTADAISAIF-ELVKLANTTADESGTREFVSYMKTM------IEEL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E K+ E+ ++++ +IE R A+K+K+F+ +D+IR
Sbjct: 406 CDVLGIITE----------------KKEEVLDSEIEEMIEARQQARKDKNFALADEIRGK 449
Query: 190 LTRKGIALMDVRKETIWR 207
L GI L D R+ W+
Sbjct: 450 LLDMGIVLEDTREGVKWK 467
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL-SLI 116
S ++T AA+ + + EFY M DD NT+ ++T K IN + ++ S +
Sbjct: 343 SHTLTEAAQ----RAKTEFYEAMDDDFNTA-LVTSVMFGLAKEINIYHHEVVNGRVGSDL 397
Query: 117 ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
++ + E +KV+ D LG+L E S S+ Q+L ++ ++ +I R A++
Sbjct: 398 QACKEAEQALKVMADTLGVLQENSARSDENQELVEQLMQL----------IITIRQEARQ 447
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KD++ +DQIR L GI L D + W+
Sbjct: 448 KKDWATADQIRDRLHDAGIVLEDSPQGARWK 478
>gi|265764886|ref|ZP_06093161.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|263254270|gb|EEZ25704.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
Length = 491
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E +S E S ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGMSRLMEAVDSLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DGA 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKRA 157
K INN +++L ++ + D+LGL E GS+ ++ A +
Sbjct: 393 KMINNIIAGNNTISADDLKNLKEVFH--TFCFDILGLKEEIGSS------DGREAAYGKV 444
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 445 ------VDMLLEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|55820186|ref|YP_138628.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55822074|ref|YP_140515.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|61216120|sp|Q5M1W6.1|SYC_STRT1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216121|sp|Q5M6F6.1|SYC_STRT2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|55736171|gb|AAV59813.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55738059|gb|AAV61700.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
Length = 447
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQAAMDDDFNTANGVTVLF-DMAKWINSGNYDE------------TVKDAFEKILQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E T E D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFEEETLDE------------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|418028429|ref|ZP_12666995.1| Cysteine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
gi|354687259|gb|EHE87359.1| Cysteine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
Length = 447
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQAAMDDDFNTANGVTVLF-DMAKWINSGNYDE------------TVKDAFEKILQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E T E D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFEEETLDE------------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|227513730|ref|ZP_03943779.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
gi|227522453|ref|ZP_03952502.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
gi|227083049|gb|EEI18361.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
gi|227090405|gb|EEI25717.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
Length = 468
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+A +GS P E ++++ +F M DD N + + + + KF N ++ +
Sbjct: 336 HNAEAGS-DPKTEQEVRQIVADFIDAMDDDFNVQNGIAAVY-ELAKFSN----MYSERNV 389
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
SL I N +K + + G+ L+++EL ++++ LI ER
Sbjct: 390 VFQNSLQFIINTLKQLAAIFGI-----------------KLEQSELKDDEIWALIHERQQ 432
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ NKDF +SD+IR +L +GI L D + T +R
Sbjct: 433 ARANKDFIRSDEIREELKARGIVLEDTPQGTRFR 466
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VA+ + G A + I+ R++F+ M DD NT+ L F +A
Sbjct: 322 TLENIRVAMERADIAFKWGPEEFEAYEAIRNAREKFHEAMDDDFNTAEALKAVF-EASNA 380
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N ++ + S++ L+ ++V +V G+ + + ++ +RA
Sbjct: 381 VNRYLTVVEKPKESILRKALEF---FRMVSEVFGI------FEDYFRE------QRAGEE 425
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E + LI+ RA +K K+F+ +D+IRA+L GI L D + T+W+
Sbjct: 426 EALIQLLIDVRAQLRKEKNFALADKIRAELREMGIQLEDTPQGTVWK 472
>gi|417768179|ref|ZP_12416112.1| cysteine--tRNA ligase [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400349075|gb|EJP01374.1| cysteine--tRNA ligase [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 471
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
I+ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FIQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M+DD N+S ++ F A + IN + K + IES ++ ++K + L
Sbjct: 364 DFIKAMNDDFNSSTAISVLFGLA-RDINKASK------VEDIESAWQLAQQLKALAQTLN 416
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
+L + + LQ + +A + L + + LI ERA AK NK+F+++D+IR L G
Sbjct: 417 ILQQ--PVQQFLQAVIGEAAEDG-LTDEAIDSLIIERADAKTNKNFARADEIRIQLKDAG 473
Query: 195 IALMDVRKETIWR 207
I L D R T WR
Sbjct: 474 IELEDSRAGTTWR 486
>gi|325954818|ref|YP_004238478.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
gi|323437436|gb|ADX67900.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
Length = 489
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 60 SITPAAEDC--IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
SI P A +K + Y M DD NT IL DA+K IN+ K+ + +
Sbjct: 354 SIEPNATSTFDVKAFETKLYEAMDDDFNTP-ILIAHLFDAVKIINSLKEGTETLNTEDLA 412
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
L KI N+ V+ VLGL E T S+ +L D L+ LIE R A+ +
Sbjct: 413 LLQKIMNDF--VVKVLGL-KEEETSSDSTHKL-DGVLQM----------LIEMRNQARVD 458
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+++ SDQIR +L+ GI L D + T ++
Sbjct: 459 KNWTLSDQIRDELSSLGIQLKDSKDGTTYQ 488
>gi|426404249|ref|YP_007023220.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860917|gb|AFY01953.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 482
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 41 TLQDCEVALSP--FQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
L E L+P QEDA IT +D KK+ + M+ D T F + +
Sbjct: 321 ALSMAESYLTPEVTQEDAAFAKIT---QDAWKKVEEA----MNHDFGTPDAFAAMF-EVV 372
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE 158
+ N ++ + ++ L N V+ + + L E + L +L D LK+
Sbjct: 373 RQFNAQVRRGMKVNPAIQGKALAFHNFVRKMGSTMSLFQEPA--HAFLIKLDDMLLKKMN 430
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
L + V L+ ER A+ KDF+KSD++RA +T GI++ D + + W
Sbjct: 431 LERSAVDTLVAERGEARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 42 LQDCEVALSPFQE-----DARSG----SITPAAEDCIKKLRDEFYTRMSDDLNTSH---I 89
L D E+ + F E D R G + P D + + D F +M DD N++ +
Sbjct: 312 LADAELRMEYFYETLRKVDERVGGKEFAPGPLHGDAARFMAD-FEAQMDDDFNSAGALGV 370
Query: 90 LTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQL 149
L+G F + ++ K P + + + +L + +V+ V +LGL E + L +
Sbjct: 371 LSGLFAMMNELVD---KPPVKDKAVVGRTLRALREDVRKVSGILGLFEEAP--ASWLLRR 425
Query: 150 KDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPC 209
+D+A+K L V L+ RA A+K KDF+++D++R +L G+ +MD T+W+
Sbjct: 426 RDRAVKERGLDVARVEQLMAARAEARKAKDFAEADRLRVELKSLGVEIMDTAAGTLWKVA 485
Query: 210 VP 211
P
Sbjct: 486 AP 487
>gi|448820267|ref|YP_007413429.1| Cysteine--tRNA ligase [Lactobacillus plantarum ZJ316]
gi|448273764|gb|AGE38283.1| Cysteine--tRNA ligase [Lactobacillus plantarum ZJ316]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + A + K N + Q+
Sbjct: 336 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGV-AAVYELAKLANVYAAKATVQK- 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ K ++ + G+ G T+ V A LA++ + LI+ER
Sbjct: 393 ---ETLIALQ---KALVQLTGVF--GVTFETV----------NATLADDAIQALIDEREA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K KDF+K+DQIR DL +GI L D + +R
Sbjct: 435 ARKAKDFAKADQIRDDLKVQGIILEDTPQGVRFR 468
>gi|386343692|ref|YP_006039856.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus JIM 8232]
gi|387908885|ref|YP_006339191.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus MN-ZLW-002]
gi|339277153|emb|CCC18901.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus JIM 8232]
gi|387573820|gb|AFJ82526.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus MN-ZLW-002]
Length = 447
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQAAMDDDFNTANGVTVLF-DMAKWINSGNYDE------------TVKDAFEKILQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E T E D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFEEETLDE------------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|293553639|ref|ZP_06674263.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
gi|425059230|ref|ZP_18462580.1| cysteine--tRNA ligase [Enterococcus faecium 504]
gi|430835026|ref|ZP_19453025.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0679]
gi|431449076|ref|ZP_19513917.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1630]
gi|431761068|ref|ZP_19549655.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3346]
gi|291602214|gb|EFF32442.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
gi|403036163|gb|EJY47526.1| cysteine--tRNA ligase [Enterococcus faecium 504]
gi|430484694|gb|ELA61656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0679]
gi|430585468|gb|ELB23753.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1630]
gi|430622442|gb|ELB59163.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3346]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QPK L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPKVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|402554324|ref|YP_006595595.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
gi|61216251|sp|Q73FB7.1|SYC_BACC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|401795534|gb|AFQ09393.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 465
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + I+ VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIQAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|418429572|ref|ZP_13002503.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387720919|gb|EIK08810.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 466
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF++SD+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARSDEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|420146259|ref|ZP_14653688.1| Cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402038|gb|EJN55434.1| Cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
LS Q+D +G I E + KL F T M DD N + +T
Sbjct: 331 LSYRQKDISAG-IDTEVEQQLTKLTKAFTTAMDDDFNVQNGMT----------------- 372
Query: 109 KQQQLSLIESLLKIENEVKVVLDVL--GLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
++ + L+ I +E K+V + L+ +T+ ++ K A L ++++
Sbjct: 373 ---EIYELAKLMNIYSEQKIVREATLNHLMDSFTTWLQIF----GVDFKPAGLLDDEIEQ 425
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LI+ER A+ NKD+ +SD+IR L +GI L D + T WR
Sbjct: 426 LIQERIDARTNKDYQRSDEIRDLLKAQGIVLEDTAQGTRWR 466
>gi|415892475|ref|ZP_11549940.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4453]
gi|430821435|ref|ZP_19440044.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430824279|ref|ZP_19442843.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430827144|ref|ZP_19445308.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0164]
gi|430829958|ref|ZP_19448027.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430851284|ref|ZP_19469034.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430853977|ref|ZP_19471699.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430867685|ref|ZP_19482583.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430906543|ref|ZP_19484978.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1575]
gi|431215120|ref|ZP_19501167.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1620]
gi|431239375|ref|ZP_19503678.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1622]
gi|431747404|ref|ZP_19536198.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2134]
gi|431766129|ref|ZP_19554625.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4215]
gi|364093304|gb|EHM35586.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4453]
gi|430438487|gb|ELA48913.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430441294|gb|ELA51409.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430444324|gb|ELA54179.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0164]
gi|430479276|gb|ELA56532.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430534246|gb|ELA74707.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430539654|gb|ELA79894.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430550072|gb|ELA89881.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430554501|gb|ELA94103.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1575]
gi|430570126|gb|ELB09100.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1620]
gi|430571982|gb|ELB10854.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1622]
gi|430606231|gb|ELB43589.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2134]
gi|430627199|gb|ELB63716.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4215]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QPK L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPKVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|320547739|ref|ZP_08042023.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
gi|320447499|gb|EFW88258.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
Length = 448
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 33/148 (22%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
G + AAE + K +D+F T M DD NT++ +T F D K+IN+
Sbjct: 331 GEVADAAE--LAKFKDDFETAMDDDFNTANGITVIF-DMAKWINSGNYDQ---------- 377
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+++ +L V G++ E E+ + DV LI +R A+ N+
Sbjct: 378 --TVKDTFAKMLAVFGIVFE------------------EEVLDADVEALIAKRQEARANR 417
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIW 206
DF+ +D IR L +GI L+D + W
Sbjct: 418 DFATADAIRDQLAVQGIKLLDTKDGVRW 445
>gi|257886072|ref|ZP_05665725.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257821928|gb|EEV49058.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QPK L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPKVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|431744784|ref|ZP_19533650.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2071]
gi|430604944|gb|ELB42366.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2071]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QPK L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPKVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|323483933|ref|ZP_08089308.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
WAL-14163]
gi|323693471|ref|ZP_08107680.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
gi|355622056|ref|ZP_09046487.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_3_54FAA]
gi|323402771|gb|EGA95094.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
WAL-14163]
gi|323502478|gb|EGB18331.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
gi|354823162|gb|EHF07500.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_3_54FAA]
Length = 468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Query: 56 ARSGSITPAAEDCI---KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ 112
A G +T + ++ I K+ +F M DD NT+ ++ F + +KF N + + +
Sbjct: 334 AAEGELTESEKENITSAKEFVQKFEASMDDDFNTADAISAVF-ELVKFSNTTASENSSKA 392
Query: 113 LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
L ++ ++ + DVLG++ E K+ E+ ++++ +I +R
Sbjct: 393 Y-----LSWLKETIEKLCDVLGIITE----------------KKEEILDSEIEDMIAQRQ 431
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K+K+F+ +D+IR L GI L D R+ W+
Sbjct: 432 QARKDKNFALADEIRGKLLEMGIVLEDTREGVKWK 466
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ ++ D + +N ++K+ +Q +L E+K + VLGL
Sbjct: 344 FIEAMDDDFNTAGAIS-VLFDLARELNRARKEAPEQAPALAA-------ELKRLGGVLGL 395
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L + E LK A L+E ++ I ERA AK+ +DF+++D IR +L GI
Sbjct: 396 LQQ-----EPAVFLKGGA-GELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGI 449
Query: 196 ALMDVRKETIW 206
L D R+ T W
Sbjct: 450 VLKDSREGTSW 460
>gi|384177995|ref|YP_005563757.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 465
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK- 127
++K + F M+DD NT++ +T + N Q L S + I+ VK
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELY--------NVANHANQYLLEEHTSTVVIQAYVKQ 398
Query: 128 --VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ D+LGL L + EL + ++ LI++R A+KN+DF+ SDQ
Sbjct: 399 LETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQ 441
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR DL + I L D + T W+
Sbjct: 442 IRDDLKDRNIILEDTAQGTRWK 463
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTR----MSDDLNTSHILTGAFLDA 97
L+ + AL+ F R +TP E + EF +R M DD NT+ L+ D
Sbjct: 285 LEQAKTALTRFYHSLRD--VTP--ETVSWREDAEFASRFAEAMDDDFNTALALS-VLADV 339
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRA 157
+ +N ++++ +Q+ + + LL EV LGL + S + + +D+A K
Sbjct: 340 RQALNIAREENDEQKSAYLAGLLLAFGEV------LGLFQQ-SAEAFLTGGQQDEAGK-- 390
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ LI ER A+ KD+S++DQ+R +LT GI L D +T WR
Sbjct: 391 ------IEQLIAERNAARAAKDWSRADQVRDELTAMGIVLEDAAGKTSWR 434
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 31/208 (14%)
Query: 18 LLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLR---D 74
+L F L+ + S YT + T Q L I+ +A+ ++L D
Sbjct: 288 VLRYFILSSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEGDD 347
Query: 75 EFYTR----MSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLIESLLKIENEVKVV 129
F R M DD NT L A L+ ++ +N ++++ + ++ + LL + +
Sbjct: 348 PFVQRFCEAMDDDFNTPEAL--ALLNEIRHALNRAREEGDKDKVQYLARLLP---SLGAI 402
Query: 130 LDVLGLLPEGSTYSEVLQQLKD----------KALKRAELAENDVLHLIEERATAKKNKD 179
L +L PE Q L+D A A L++ D+ LI +R A+KNKD
Sbjct: 403 LGLLTQEPE--------QFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKD 454
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D +R L ++GI L D T+WR
Sbjct: 455 WAAADHLRDVLKKQGITLEDTPTGTLWR 482
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 80 MSDDLNTSHILTGAFLDALKFIN----NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
+ DDLNT+ L G ++ +N + + + L+L+E L + + VL V G
Sbjct: 358 LEDDLNTAAAL-GHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLGVFGR 416
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
PE L LK+ ++R + V L+EER + + KDF+++D IR +L GI
Sbjct: 417 EPEA-----FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGI 471
Query: 196 ALMDVRKETIW 206
+ D +W
Sbjct: 472 EVRDTPSGAVW 482
>gi|392429269|ref|YP_006470281.1| cysteinyl-tRNA synthetase [Streptococcus intermedius JTH08]
gi|419776072|ref|ZP_14301995.1| cysteine--tRNA ligase [Streptococcus intermedius SK54]
gi|383846280|gb|EID83679.1| cysteine--tRNA ligase [Streptococcus intermedius SK54]
gi|391758416|dbj|BAM24033.1| cysteinyl-tRNA synthetase [Streptococcus intermedius JTH08]
Length = 447
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP--KQQQLSLIESLL-----------KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + +++LL N + VV ++ + G+ +E
Sbjct: 318 LKYLKNTYEQPFTGQTDSAQLQTLLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + + E+ + DV HLIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKEAFAKLLEVFGIVFVEEVLDADVEHLIEERQMARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 80 MSDDLNTSHILTGAFLDALKFIN----NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
+ DDLNT+ L G ++ +N + + + L+L+E L + + VL V G
Sbjct: 358 LEDDLNTAAAL-GHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLGVFGR 416
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
PE L LK+ ++R + V L+EER + + KDF+++D IR +L GI
Sbjct: 417 EPEA-----FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGI 471
Query: 196 ALMDVRKETIW 206
+ D +W
Sbjct: 472 EVRDTPSGAVW 482
>gi|57167801|ref|ZP_00366941.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
gi|419536065|ref|ZP_14075551.1| cysteinyl-tRNA synthetase [Campylobacter coli 111-3]
gi|419541425|ref|ZP_14080628.1| cysteinyl-tRNA synthetase [Campylobacter coli Z163]
gi|419545461|ref|ZP_14084357.1| cysteinyl-tRNA synthetase [Campylobacter coli 2553]
gi|419547067|ref|ZP_14085808.1| cysteinyl-tRNA synthetase [Campylobacter coli 2680]
gi|419547939|ref|ZP_14086575.1| cysteinyl-tRNA synthetase [Campylobacter coli 2685]
gi|419551296|ref|ZP_14089752.1| cysteinyl-tRNA synthetase [Campylobacter coli 2688]
gi|419552870|ref|ZP_14091155.1| cysteinyl-tRNA synthetase [Campylobacter coli 2692]
gi|419555898|ref|ZP_14093899.1| cysteinyl-tRNA synthetase [Campylobacter coli 84-2]
gi|419557901|ref|ZP_14095794.1| cysteinyl-tRNA synthetase [Campylobacter coli 80352]
gi|419561273|ref|ZP_14098892.1| cysteinyl-tRNA synthetase [Campylobacter coli 86119]
gi|419562687|ref|ZP_14100190.1| cysteinyl-tRNA synthetase [Campylobacter coli 1091]
gi|419564429|ref|ZP_14101810.1| cysteinyl-tRNA synthetase [Campylobacter coli 1098]
gi|419566470|ref|ZP_14103729.1| cysteinyl-tRNA synthetase [Campylobacter coli 1148]
gi|419569099|ref|ZP_14106217.1| cysteinyl-tRNA synthetase [Campylobacter coli 1417]
gi|419574346|ref|ZP_14111098.1| cysteinyl-tRNA synthetase [Campylobacter coli 1891]
gi|419575389|ref|ZP_14112081.1| cysteinyl-tRNA synthetase [Campylobacter coli 1909]
gi|419578342|ref|ZP_14114853.1| cysteinyl-tRNA synthetase [Campylobacter coli 59-2]
gi|419579175|ref|ZP_14115593.1| cysteinyl-tRNA synthetase [Campylobacter coli 1948]
gi|419580733|ref|ZP_14117052.1| cysteinyl-tRNA synthetase [Campylobacter coli 1957]
gi|419584230|ref|ZP_14120349.1| cysteinyl-tRNA synthetase [Campylobacter coli 1961]
gi|419585602|ref|ZP_14121652.1| cysteinyl-tRNA synthetase [Campylobacter coli 202/04]
gi|419594023|ref|ZP_14129213.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9854]
gi|419595201|ref|ZP_14130311.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23336]
gi|419599956|ref|ZP_14134733.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23344]
gi|419602148|ref|ZP_14136731.1| cysteinyl-tRNA synthetase [Campylobacter coli 151-9]
gi|419607668|ref|ZP_14141946.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9860]
gi|419610605|ref|ZP_14144665.1| cysteinyl-tRNA synthetase [Campylobacter coli H8]
gi|419613238|ref|ZP_14147089.1| cysteinyl-tRNA synthetase [Campylobacter coli H9]
gi|419614784|ref|ZP_14148554.1| cysteinyl-tRNA synthetase [Campylobacter coli H56]
gi|419616186|ref|ZP_14149836.1| cysteinyl-tRNA synthetase [Campylobacter coli Z156]
gi|57020923|gb|EAL57587.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
gi|380514492|gb|EIA40726.1| cysteinyl-tRNA synthetase [Campylobacter coli Z163]
gi|380519043|gb|EIA45129.1| cysteinyl-tRNA synthetase [Campylobacter coli 111-3]
gi|380521304|gb|EIA47041.1| cysteinyl-tRNA synthetase [Campylobacter coli 2680]
gi|380521863|gb|EIA47572.1| cysteinyl-tRNA synthetase [Campylobacter coli 2553]
gi|380528054|gb|EIA53384.1| cysteinyl-tRNA synthetase [Campylobacter coli 2685]
gi|380528707|gb|EIA53941.1| cysteinyl-tRNA synthetase [Campylobacter coli 2688]
gi|380530315|gb|EIA55399.1| cysteinyl-tRNA synthetase [Campylobacter coli 2692]
gi|380535425|gb|EIA60134.1| cysteinyl-tRNA synthetase [Campylobacter coli 84-2]
gi|380536048|gb|EIA60712.1| cysteinyl-tRNA synthetase [Campylobacter coli 86119]
gi|380540262|gb|EIA64575.1| cysteinyl-tRNA synthetase [Campylobacter coli 1091]
gi|380540843|gb|EIA65135.1| cysteinyl-tRNA synthetase [Campylobacter coli 80352]
gi|380542396|gb|EIA66631.1| cysteinyl-tRNA synthetase [Campylobacter coli 1098]
gi|380544297|gb|EIA68342.1| cysteinyl-tRNA synthetase [Campylobacter coli 1417]
gi|380546526|gb|EIA70472.1| cysteinyl-tRNA synthetase [Campylobacter coli 1148]
gi|380549754|gb|EIA73512.1| cysteinyl-tRNA synthetase [Campylobacter coli 1891]
gi|380553861|gb|EIA77359.1| cysteinyl-tRNA synthetase [Campylobacter coli 1909]
gi|380555136|gb|EIA78500.1| cysteinyl-tRNA synthetase [Campylobacter coli 59-2]
gi|380557944|gb|EIA81138.1| cysteinyl-tRNA synthetase [Campylobacter coli 1948]
gi|380560312|gb|EIA83396.1| cysteinyl-tRNA synthetase [Campylobacter coli 1957]
gi|380560794|gb|EIA83831.1| cysteinyl-tRNA synthetase [Campylobacter coli 1961]
gi|380561878|gb|EIA84782.1| cysteinyl-tRNA synthetase [Campylobacter coli 202/04]
gi|380567883|gb|EIA90376.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9854]
gi|380574175|gb|EIA96286.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23336]
gi|380581719|gb|EIB03434.1| cysteinyl-tRNA synthetase [Campylobacter coli 151-9]
gi|380583650|gb|EIB05173.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9860]
gi|380583706|gb|EIB05224.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23344]
gi|380588366|gb|EIB09496.1| cysteinyl-tRNA synthetase [Campylobacter coli H9]
gi|380589694|gb|EIB10739.1| cysteinyl-tRNA synthetase [Campylobacter coli H8]
gi|380592298|gb|EIB13207.1| cysteinyl-tRNA synthetase [Campylobacter coli H56]
gi|380596019|gb|EIB16732.1| cysteinyl-tRNA synthetase [Campylobacter coli Z156]
Length = 460
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG----- 134
+SDDLN S L A LD +FI N+ + QQ + E KI+ + + + G
Sbjct: 344 LSDDLNISKAL--ALLD--EFITNANLELDQQSKN-KELKQKIKEALSELAKIFGFGFMD 398
Query: 135 --LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 399 ENLYFQWGVAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 443
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 444 LGIALQDTPQGTIW 457
>gi|456865270|gb|EMF83630.1| cysteine--tRNA ligase [Leptospira weilii serovar Topaz str. LT2116]
Length = 472
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C L + + + SI
Sbjct: 291 PKAIRFLLISAHYRSKLNFSTDRIAEASAN-IRKIQNCLNRLLDLEPNVKIDSIFTFTLP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
+ + EF ++DDLN S L F ++LK IN ++ + +Q++ I+ L +
Sbjct: 350 LTQTWKKEFEESLADDLNISKALAIVF-ESLKQINSLLDTNQTDSKQRVEFIQILAYYDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ G+L + KD L ++++ LIEER TA+KNK+F++SD
Sbjct: 409 -------IFGILN--------FESPKDP------LIDSEIDSLIEERQTARKNKNFARSD 447
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D + WR
Sbjct: 448 AIRDQLLAQGILIEDTKDGIRWR 470
>gi|343520710|ref|ZP_08757679.1| cysteine--tRNA ligase [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397668|gb|EGV10202.1| cysteine--tRNA ligase [Parvimonas sp. oral taxon 393 str. F0440]
Length = 341
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
E+ G I+ E L+ EF M DDLNT+ ++ + + I + + L
Sbjct: 214 EEREDGDISRLVE-----LKKEFLESMDDDLNTADAISKVY----ELIRYTNTFDENTDL 264
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
+++ +K+ + VLGLL Y E L +K K LIEER
Sbjct: 265 KVVKGAVKL---LSDFASVLGLL-----YKEEDDNLDEKVEK-----------LIEEREE 305
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KNKDF ++D+IR L I L D R +W+
Sbjct: 306 ARKNKDFKRADEIRDILKEMNIELKDTRNGVVWK 339
>gi|305432177|ref|ZP_07401341.1| cysteine--tRNA ligase [Campylobacter coli JV20]
gi|304444720|gb|EFM37369.1| cysteine--tRNA ligase [Campylobacter coli JV20]
Length = 457
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG----- 134
+SDDLN S L A LD +FI N+ + QQ + E KI+ + + + G
Sbjct: 341 LSDDLNISKAL--ALLD--EFITNANLELDQQSKN-KELKQKIKEALSELAKIFGFGFMD 395
Query: 135 --LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 396 ENLYFQWGVAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 440
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 441 LGIALQDTPQGTIW 454
>gi|379729030|ref|YP_005321226.1| cysteinyl-tRNA synthetase [Saprospira grandis str. Lewin]
gi|378574641|gb|AFC23642.1| cysteinyl-tRNA synthetase [Saprospira grandis str. Lewin]
Length = 556
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 21/144 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILT---GAFLDALKFINNSKKQPKQQQLSLI--ESLLKIE 123
I KL D + + +DLNT L G D KF N QQ L I E+L +++
Sbjct: 423 INKLLDGAFAELDEDLNTPKALAKIFGLVSDIQKFTNG------QQDLGSIAPETLARLK 476
Query: 124 NEVK-VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+ +V D+ GL E + + Q +DKAL + + +IE+R A+ NKD++K
Sbjct: 477 KDFSAIVFDIFGLQKE----ALIGQSDEDKAL-----LDGLMQMIIEQRQEARANKDWAK 527
Query: 183 SDQIRADLTRKGIALMDVRKETIW 206
SDQIR L G+ + D ++ + W
Sbjct: 528 SDQIRDALQALGLQIKDGKEGSSW 551
>gi|392390374|ref|YP_006426977.1| cysteinyl-tRNA synthetase [Ornithobacterium rhinotracheale DSM
15997]
gi|390521452|gb|AFL97183.1| cysteinyl-tRNA synthetase [Ornithobacterium rhinotracheale DSM
15997]
Length = 490
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
E Y +M DD NT +L +A+KFIN K ++ L+ + L IE DVLG
Sbjct: 371 ESYAKMDDDFNTP-MLIAQLFEAVKFINLVKD--GKETLTQADKDLLIEKFRAFTQDVLG 427
Query: 135 L-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
L L E SE QL D A+K LI+ R A++NKD++ SDQIR +L
Sbjct: 428 LKLNEAQ--SEDAGQL-DTAMKL----------LIDIRKKARENKDWATSDQIRDELAEG 474
Query: 194 GIALMDVRKETIW 206
GI L D + T +
Sbjct: 475 GIQLKDGKDGTTY 487
>gi|419589561|ref|ZP_14125351.1| cysteinyl-tRNA synthetase [Campylobacter coli 317/04]
gi|380567109|gb|EIA89652.1| cysteinyl-tRNA synthetase [Campylobacter coli 317/04]
Length = 460
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG----- 134
+SDDLN S L A LD +FI N+ + QQ + E KI+ + + + G
Sbjct: 344 LSDDLNISKAL--ALLD--EFITNANLELDQQSKN-KELKQKIKEALSELAKIFGFGFMD 398
Query: 135 --LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 399 ENLYFQWGVAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 443
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 444 LGIALQDTPQGTIW 457
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ IK+ RD+F M DD NT+ + G +A+ +N K I+++ +V
Sbjct: 344 ESIKRHRDDFVAAMDDDFNTAGAI-GHIFEAVSTVNGHLKGNDSLSSEGIKAIEDFFRDV 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ ++GL +G Q D ++ LI +R A+ KDF+ SD I
Sbjct: 403 DSIMGLIGLDSDG--------QDDDS---------EEIESLIRKREEARSAKDFATSDAI 445
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L KG+ L D + T W+
Sbjct: 446 RDQLAAKGVILEDTPQGTKWK 466
>gi|332637987|ref|ZP_08416850.1| cysteinyl-tRNA synthetase [Weissella cibaria KACC 11862]
Length = 471
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD N + +T + L + N Q ++ + + +LK ++K +++V
Sbjct: 357 DAFVEAMDDDFNAQNAMTAVY--ELIELANLYSQAEEVKTDTVNFVLK---QIKDLMNVF 411
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+ L++A L + DV LI+ER A++ +F++SD+IR +L +
Sbjct: 412 GV----------------DGLEQAPLLDADVDALIKERDAARETSNFARSDEIRDELASR 455
Query: 194 GIALMDVRKETIWR 207
GI L D + T WR
Sbjct: 456 GIILEDTPQGTRWR 469
>gi|260589563|ref|ZP_05855476.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
gi|260540131|gb|EEX20700.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
Length = 468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 22/128 (17%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEG 139
M DD NT+ + F + +KF N K + + ++ L + + + DVLGL+
Sbjct: 361 MEDDFNTADAIAAIF-ELVKFANT--KANENSTAAFVQYLF---DTIVHLSDVLGLIVN- 413
Query: 140 STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
K AE+ + ++ LIEER A+K K+F ++D+IR +L GI L D
Sbjct: 414 ---------------KEAEILDEEIEKLIEERQMARKEKNFKRADEIRDELATMGIILKD 458
Query: 200 VRKETIWR 207
R+ W+
Sbjct: 459 TREGVQWK 466
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
+ F T M DD N+ L D + +N +K + ++ L L ++ VL
Sbjct: 340 ERFTTAMDDDFNSPEALA-VLFDLARDLNRAKSESSEKAQHLASELTRLAG-------VL 391
Query: 134 GLLPEG-STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
GLL + T+ + QQ + L+E ++ I +R AK NKDF+++D IR +L
Sbjct: 392 GLLQQNPQTFLKGNQQ-------QVALSEAEIEAKIAQRKEAKANKDFAQADAIRDELAS 444
Query: 193 KGIALMDVRKETIW 206
GI L D R+ T W
Sbjct: 445 MGIILKDSREGTTW 458
>gi|300769737|ref|ZP_07079619.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492645|gb|EFK27831.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 506
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + + + K N + Q+
Sbjct: 372 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGVAAVY-ELAKLANVYAAKATVQK- 428
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ + + V G+ E + A LA++ + LI+ER
Sbjct: 429 ---ETLIALQEALVQLTGVFGVTFETAN---------------ATLADDAIQALIDEREA 470
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K KDF+K+DQIR DL +GI L D + +R
Sbjct: 471 ARKAKDFAKADQIRDDLKAQGIILEDTPQGVRFR 504
>gi|419591965|ref|ZP_14127295.1| cysteinyl-tRNA synthetase [Campylobacter coli 37/05]
gi|380567135|gb|EIA89675.1| cysteinyl-tRNA synthetase [Campylobacter coli 37/05]
Length = 460
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG----- 134
+SDDLN S L A LD +FI N+ + QQ + E KI+ + + + G
Sbjct: 344 LSDDLNISKAL--ALLD--EFITNANLELDQQSKN-KELKQKIKEALSELAKIFGFGFMD 398
Query: 135 --LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 399 ENLYFQWGVAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 443
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 444 LGIALQDTPQGTIW 457
>gi|254555716|ref|YP_003062133.1| cysteinyl-tRNA synthetase [Lactobacillus plantarum JDM1]
gi|254044643|gb|ACT61436.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
Length = 470
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + A + K N + Q+
Sbjct: 336 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGV-AAVYELAKLANVYAAKATVQK- 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ + + V G+ E + A LA++ + LI+ER
Sbjct: 393 ---ETLIALQKALVQLTGVFGVTFETAN---------------ATLADDAIQALIDEREA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K KDF+K+DQIR DL +GI L D + +R
Sbjct: 435 ARKAKDFAKADQIRDDLKAQGIILEDTPQGVRFR 468
>gi|418561548|ref|ZP_13126036.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
gi|371977405|gb|EHO94676.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
Length = 466
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I ++ + F T M+DD NT++ +T A+ D K N + + + E + K++
Sbjct: 343 DQIDEILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKLKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|313148019|ref|ZP_07810212.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313136786|gb|EFR54146.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
Length = 491
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E A G ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGLSRLME-AVDGLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DG 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKR 156
K INN ++ L ++ + D+LGL E GS+ ++ A +
Sbjct: 392 AKMINNIIAGNNTISADDLKELKEVFH--TFCFDILGLKEEIGSS------DGREAAYGK 443
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 444 V------VDMLLEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|423281249|ref|ZP_17260160.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 610]
gi|424665815|ref|ZP_18102851.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 616]
gi|404574068|gb|EKA78819.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 616]
gi|404583157|gb|EKA87839.1| cysteinyl-tRNA synthetase [Bacteroides fragilis HMW 610]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E A G ITPAA + K LR + + M+DDLNT +++ F D
Sbjct: 334 LQAAEKGLSRLME-AVDGLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLF-DG 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKR 156
K INN ++ L ++ + D+LGL E GS+ ++ A +
Sbjct: 392 AKMINNIIAGNNTISADDLKELKEVFH--TFCFDILGLKEEIGSS------DGREAAYGK 443
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
V L+E+R AK NKD++ SD IR +LT G + D + W+
Sbjct: 444 V------VDMLLEQRVKAKANKDWATSDLIRNELTALGFEIKDTKDGFEWK 488
>gi|419604838|ref|ZP_14139295.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9853]
gi|380579229|gb|EIB01031.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 9853]
Length = 460
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEVKVVLDVLGLLP 137
+SDDLN S L A LD +FI N+ + QQ + L + + + +E+ + G +
Sbjct: 344 LSDDLNISKAL--ALLD--EFITNANLELDQQSKNKELKQKIKEALSELAKIFG-FGFMD 398
Query: 138 EGSTY-----SEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
E + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 399 ENLYFQWGIAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 443
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 444 LGIALQDTPQGTIW 457
>gi|331082990|ref|ZP_08332109.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330399727|gb|EGG79388.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 468
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 22/128 (17%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEG 139
M DD NT+ + F + +KF N K + + ++ L + + + DVLGL+
Sbjct: 361 MEDDFNTADAIAAIF-ELVKFANT--KANENSTAAFVQYLF---DTIVHLSDVLGLIVN- 413
Query: 140 STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
K AE+ + ++ LIEER A+K K+F ++D+IR +L GI L D
Sbjct: 414 ---------------KEAEILDEEIEKLIEERQMARKEKNFKRADEIRDELAAMGIILKD 458
Query: 200 VRKETIWR 207
R+ W+
Sbjct: 459 TREGVQWK 466
>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|21264005|sp|Q8YXW5.1|SYC_NOSS1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 486
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 148 QLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L D+ +A L++ D+ LIE+R A+KNK+FS+SD+IR +L +G+ L+D + T W
Sbjct: 425 KLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQGVTLIDSPQGTRWH 484
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
+ F M+DD NT ++ F + + +N + ++ + +L L K+
Sbjct: 337 FEERFIAAMNDDFNTPKAVSVMF-ELVNELNKATREGASEAPALAAQLRKLGG------- 388
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+LGLL + + E LQ ++ L+ ++ LI +RA AKK K+F+++D+IR DL
Sbjct: 389 MLGLLQQNA--DEFLQGESEEG----GLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLA 442
Query: 192 RKGIALMDVRKETIW 206
+GI L D R+ T W
Sbjct: 443 SQGIILKDSREGTSW 457
>gi|417769568|ref|ZP_12417483.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418684046|ref|ZP_13245237.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418734571|ref|ZP_13291012.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 12758]
gi|421118802|ref|ZP_15579137.1| cysteine--tRNA ligase [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400324267|gb|EJO76565.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409948273|gb|EKN98262.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410009826|gb|EKO67982.1| cysteine--tRNA ligase [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410772691|gb|EKR52730.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 12758]
gi|455667145|gb|EMF32488.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|421451477|ref|ZP_15900838.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
gi|400181908|gb|EJO16170.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
Length = 447
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQQLS-------------LIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ P +Q++ ++ N V V+ D+ + G+ Y +
Sbjct: 318 LKYLKNTHSLPLTEQVNQAELQTYLDTFQEAMDDDFNTANGVTVLFDMAKWINSGN-YDQ 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
++ + +K L+ E+ + D+ LIEER A+ NKDF+ +D+IR +L +GI L+
Sbjct: 377 TVKDVFEKMLQVFGIVFEEEVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D ++ W
Sbjct: 437 DTKEGVRW 444
>gi|205372089|ref|ZP_03224906.1| cysteinyl-tRNA synthetase [Bacillus coahuilensis m4-4]
Length = 467
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +L+ +F M DD NT++ ++ F KQ L+E EN
Sbjct: 347 IAELKKQFIQAMDDDFNTANAISVLF-----------DLSKQGNYYLME-----ENTEVR 390
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VLD T+ E+ L K AEL + ++ LIEER A+KN DF +SD+IR
Sbjct: 391 VLDEFT-----QTFEELFDVLGLKLSGEAELLDEEIEKLIEERIQARKNCDFKRSDEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D + T W+
Sbjct: 446 KLKEMNIVLEDTPQGTRWK 464
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K R++F +M DD NT+ ++ F D +K INN+ + I++ ++
Sbjct: 347 LDKHREKFIEKMDDDFNTADGISVIF-DLIKDINNN---------------VSIDSSSEL 390
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L L+ E + +LQ+ ++K+L E ++ LI++R A+KN+DF+ +D+IR
Sbjct: 391 CEGTLNLIRELGSPLGILQKTEEKSL------EVEIQELIDKRQEARKNRDFALADKIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
DL + I L D + W+
Sbjct: 445 DLKARNIILEDTPQGVRWK 463
>gi|45657880|ref|YP_001966.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|418726145|ref|ZP_13284756.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 12621]
gi|421085967|ref|ZP_15546818.1| cysteine--tRNA ligase [Leptospira santarosai str. HAI1594]
gi|421103480|ref|ZP_15564079.1| cysteine--tRNA ligase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421126382|ref|ZP_15586616.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421137208|ref|ZP_15597295.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|59798557|sp|Q72QT1.1|SYC_LEPIC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|45601121|gb|AAS70603.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409960055|gb|EKO23809.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 12621]
gi|410018422|gb|EKO85260.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410366725|gb|EKP22114.1| cysteine--tRNA ligase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431532|gb|EKP75892.1| cysteine--tRNA ligase [Leptospira santarosai str. HAI1594]
gi|410436163|gb|EKP85285.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|421109850|ref|ZP_15570357.1| cysteine--tRNA ligase [Leptospira kirschneri str. H2]
gi|410004877|gb|EKO58681.1| cysteine--tRNA ligase [Leptospira kirschneri str. H2]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|417759412|ref|ZP_12407449.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000624]
gi|417777316|ref|ZP_12425139.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000621]
gi|418668801|ref|ZP_13230201.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418675041|ref|ZP_13236334.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000623]
gi|418689185|ref|ZP_13250310.1| cysteine--tRNA ligase [Leptospira interrogans str. FPW2026]
gi|418699671|ref|ZP_13260625.1| cysteine--tRNA ligase [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418706967|ref|ZP_13267805.1| cysteine--tRNA ligase [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|421119626|ref|ZP_15579946.1| cysteine--tRNA ligase [Leptospira interrogans str. Brem 329]
gi|400361668|gb|EJP17631.1| cysteine--tRNA ligase [Leptospira interrogans str. FPW2026]
gi|409944887|gb|EKN90467.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000624]
gi|410347777|gb|EKO98650.1| cysteine--tRNA ligase [Leptospira interrogans str. Brem 329]
gi|410572855|gb|EKQ35914.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000621]
gi|410577893|gb|EKQ45761.1| cysteine--tRNA ligase [Leptospira interrogans str. 2002000623]
gi|410755533|gb|EKR17163.1| cysteine--tRNA ligase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410761310|gb|EKR27494.1| cysteine--tRNA ligase [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410763544|gb|EKR34273.1| cysteine--tRNA ligase [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|455788679|gb|EMF40644.1| cysteine--tRNA ligase [Leptospira interrogans serovar Lora str. TE
1992]
gi|456821725|gb|EMF70231.1| cysteine--tRNA ligase [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|418716527|ref|ZP_13276490.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 08452]
gi|410787298|gb|EKR81030.1| cysteine--tRNA ligase [Leptospira interrogans str. UI 08452]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|24214563|ref|NP_712044.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
56601]
gi|386073966|ref|YP_005988283.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
IPAV]
gi|418709088|ref|ZP_13269885.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|30316164|sp|Q8F525.1|SYC_LEPIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24195528|gb|AAN49062.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
56601]
gi|353457755|gb|AER02300.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
IPAV]
gi|410770633|gb|EKR45849.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|415721964|ref|ZP_11468852.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
gi|388060128|gb|EIK82827.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
Length = 549
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFL---DALKFINNSKKQPKQQQLSLIESLLKIEN-EV 126
L ++F M+DD+N S L F +++ + Q I++LLK +V
Sbjct: 400 NLPEDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQSQDNSQNDSIKNLLKTCVLQV 459
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKD-------KALKRAELAENDVLHLIEERATAKKNKD 179
+ +LD LGL P + Q+ +D A + E+ + + +E+RA A+ KD
Sbjct: 460 RAMLDTLGLDPYSPQWRSNAQKSQDLGEDADNGASAEHKALESLITNQLEQRAIARAAKD 519
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
F+++D IR LT G+ + D + + W
Sbjct: 520 FARADAIRDSLTAAGVVIEDSAQGSSWH 547
>gi|456970200|gb|EMG11045.1| cysteine--tRNA ligase [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 472
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF++SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|390629514|ref|ZP_10257508.1| Cysteinyl-tRNA synthetase [Weissella confusa LBAE C39-2]
gi|390485150|emb|CCF29856.1| Cysteinyl-tRNA synthetase [Weissella confusa LBAE C39-2]
Length = 471
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD N + +T + L + N Q ++ + + +LK ++K +++V
Sbjct: 357 DAFVEAMDDDFNAQNAMTAVY--ELIELANLYSQAEEVKTDTVNFVLK---QIKDLMNVF 411
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+ L++A L + DV LI+ER A++ +F++SD+IR +L +
Sbjct: 412 GV----------------DGLEQAPLLDADVDALIKERDAARETSNFARSDEIRDELAAR 455
Query: 194 GIALMDVRKETIWR 207
GI L D + T WR
Sbjct: 456 GIILEDTPQGTRWR 469
>gi|380031613|ref|YP_004888604.1| cysteine-tRNA synthetase [Lactobacillus plantarum WCFS1]
gi|38258341|sp|Q88YX9.1|SYC_LACPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|342240856|emb|CCC78090.1| cysteine-tRNA synthetase [Lactobacillus plantarum WCFS1]
Length = 470
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + A + K N + Q+
Sbjct: 336 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGV-AAVYELAKLANVYAAKATVQK- 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ + + V G+ E + A LA++ + LI+ER
Sbjct: 393 ---ETLIALQKALVQLTGVFGVTFETAN---------------ATLADDAIQALIDEREA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K KDF+K+DQIR DL +GI L D + +R
Sbjct: 435 ARKAKDFAKADQIRDDLKVQGIMLEDTPQGVRFR 468
>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 440
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
I+K + F M+DD NT++ +T + N++ + ++ S +IE+ +K +
Sbjct: 322 IEKFQLAFEEAMNDDFNTANAIT----ELYNLANHANQYLLEEHTSKVVIEAYVK---QF 374
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 375 ETLFGILGL-----------------ELTKEELLDEEIEALIQKRIEARKNRDFALSDQI 417
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 418 RDDLKERNIILEDTAQGTRWK 438
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D + + +F M DDLNTS ++ F + KF+N + K ++ I + + NE+
Sbjct: 345 DELNSYKTKFIEAMDDDLNTSDAISAIF-ELAKFMNTNIKDTSSKEF--IGLNIDLFNEL 401
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VL++ +K+++ + V +I +RA AKKNKDF+ +D+I
Sbjct: 402 TGVLNI-----------------ANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKI 444
Query: 187 RADLTRKGIALMDVRKETIWR 207
R +L GI + D R+ W+
Sbjct: 445 REELLEMGIVIEDTRQGVKWK 465
>gi|333029518|ref|ZP_08457579.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
gi|332740115|gb|EGJ70597.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
Length = 491
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K L+ + M+DDLNT +++ F D K INN +E L N
Sbjct: 364 VKGLKAKCIEAMNDDLNTPIVISHLF-DGAKIINNIFAGNNTISAEDLEELKDTFN--LF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ D+LG+ E S+ + ++ A + V L+E+R AK+NKD++ SDQIR
Sbjct: 421 LFDILGMKTENSSSGD-----REAAYSKV------VDMLLEQRLIAKQNKDWATSDQIRD 469
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D ++ + W+
Sbjct: 470 ELTSLGFEIKDTKEGSEWK 488
>gi|358061013|ref|ZP_09147699.1| cysteinyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
gi|357256536|gb|EHJ06898.1| cysteinyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
Length = 466
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 67 DCIKKLR---DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
D IK+++ D F T M+DD NT++ +T A+ D K N + + + + + K +
Sbjct: 340 DYIKQIQAILDRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSSKVIAKFK 394
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
++ DVLG+ LKD K A L + D+ LIEER A+KNKDF+++
Sbjct: 395 EVYQIFSDVLGI------------PLKDS--KVALLLDEDIEKLIEERNLARKNKDFARA 440
Query: 184 DQIRADLTRKGIALMD 199
D+IR L + I L D
Sbjct: 441 DEIRDMLKEQNIILED 456
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 53 QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTS----HILTGAFLDALKFINNSKKQP 108
+E SG + + + LR F M DD+NT+ H+ T L A + ++N ++
Sbjct: 331 REKWTSGPLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFTMVRL-ANRILDNKGQRK 389
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+ + ++L VL V G P G L +L+ + R + V L+
Sbjct: 390 TEGARAFFRAVLDEAATWFAVLGVFGREPAG-----FLAELRACRVARKGIDPAKVEELL 444
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ R A+ +KDF+++D IR ++ GI + D +W
Sbjct: 445 QARINARADKDFARADAIRDEIAALGIEVRDTPSGAVW 482
>gi|418621538|ref|ZP_13184307.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|374828769|gb|EHR92594.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU123]
Length = 466
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + ++ + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENITSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 MLKARHIILED 456
>gi|386727442|ref|YP_006193768.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|384094567|gb|AFH66003.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 465
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
L++C L + A G ++ ++++F +M+DD NT +T F + + F
Sbjct: 319 LENCIAGLKHRLQSAAEGDAEEEVSAAVQAVKEQFEAKMNDDFNTPDAITAMF-ELVNFA 377
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLD-VLGLL-PEGSTYSEVLQQLKDKALKRAEL 159
N P + S+ + L++ E +D VLG+L PE L
Sbjct: 378 N-----PYAARESVRTASLQLLLEQFAAMDGVLGILTPEDEG-----------------L 415
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++++ LI ER A+K+K+++++D+IR LT +GI L D + WR
Sbjct: 416 LDDEIEQLIIERTEARKSKNWARADEIRDLLTARGILLEDTAQGIRWR 463
>gi|417783743|ref|ZP_12431459.1| cysteine--tRNA ligase [Leptospira interrogans str. C10069]
gi|409953130|gb|EKO07633.1| cysteine--tRNA ligase [Leptospira interrogans str. C10069]
Length = 471
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF +SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFGRSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 468
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 27/147 (18%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
AA D + F M DD NT+ ++ F A + N P +L+ LL +
Sbjct: 344 AALDWNEPFAARFKAAMDDDFNTALAVSVLFELATEI--NRTGSP-----ALVRQLLGLG 396
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAEND---VLHLIEERATAKKNKDF 180
+L++LG+ PE K L+ A +D + LIEERA AKK K+F
Sbjct: 397 R----ILNILGMEPE-------------KFLQGGAEASDDASRIEGLIEERALAKKAKNF 439
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWR 207
+++D+IR L +GI L D T WR
Sbjct: 440 ARADEIRKSLLAEGIELQDGAAGTTWR 466
>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 465
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 27/134 (20%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIENEVKVVLDVL 133
F M DD+NT+ +T A + +KFIN + ++L + +LL++ VL
Sbjct: 355 FEESMEDDINTADAIT-AIYNIVKFINIELNEDSNKKLVDEIYNTLLRLSK-------VL 406
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+L L+R + E +V LI+ER A+KNKDF ++D+IR L K
Sbjct: 407 GILE----------------LERENIDE-EVERLIKEREDARKNKDFKRADEIRDILASK 449
Query: 194 GIALMDVRKETIWR 207
I + D R T W+
Sbjct: 450 NILIEDTRTGTKWK 463
>gi|418694833|ref|ZP_13255864.1| cysteine--tRNA ligase [Leptospira kirschneri str. H1]
gi|409957383|gb|EKO16293.1| cysteine--tRNA ligase [Leptospira kirschneri str. H1]
Length = 471
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 30/203 (14%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQEDARSGSITPAAED 67
P +R LL+ + ++L S I + + N +Q+C + + D ++ +
Sbjct: 291 PKAIRFLLISTHYRSKLNFSTDRIAEASAN-IRKIQNCLDRILELEPDIKADFYFLFSIP 349
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIEN 124
++ + EF ++DDLN S L F +++K IN ++ + +Q++ I+ L +
Sbjct: 350 FVQTWKKEFEESLADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+LG+L S + +L ++++ LIEER A+KNKDF +SD
Sbjct: 409 -------ILGVLNFES---------------KKDLLDSEIDSLIEERQIARKNKDFGRSD 446
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR L +GI + D ++ WR
Sbjct: 447 AIRDQLLAQGILIEDTKEGIRWR 469
>gi|451822878|ref|YP_007459152.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775678|gb|AGF46719.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 482
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M+DD NT ++ F + + + IES K K + ++LGL
Sbjct: 360 FSNAMNDDFNTPKAISILF----------ELASRTNKNHCIESAKK----TKYLSNILGL 405
Query: 136 LPEG--STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
L + S + + +D K L+++D+ L+++R TAK N D++KSD IR++L +
Sbjct: 406 LYQNPSSYFKNSTRYTRDVLDKSLYLSDHDIEELVKQRITAKTNCDYNKSDHIRSELKKS 465
Query: 194 GIALMDVR-KETIWR 207
G+ L D+ T WR
Sbjct: 466 GVELEDLTDSSTRWR 480
>gi|261337996|ref|ZP_05965880.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
gi|270277500|gb|EFA23354.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
Length = 550
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M++D+N S L F A++ N+ + ESLL +V+ +LD LG
Sbjct: 429 DFTNAMNEDINVSGALAAIFT-AIRN-GNALMDANADAAQVRESLL----QVRAMLDTLG 482
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
L PE +++ ++ L R + +E RA A+K KDF+ +D IR L G
Sbjct: 483 LDPEAEPWAQETSNAANEVLDRL------IATQLEARAEARKAKDFATADAIRDALAAAG 536
Query: 195 IALMDVRKETIW 206
I + D + W
Sbjct: 537 ITIEDTPQGPTW 548
>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 436
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 24/137 (17%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLIESLLKIENEVKVVL---- 130
F M DD NT+ A L A+ IN +++ + ++ NE VL
Sbjct: 317 FAEAMDDDFNTAGAT--AVLHAVANEINLHRREGRDEKA----------NEQAAVLVRLG 364
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VLGLL + E Q A EL+ +D+ +I+ RA A+K KDF+++D+IR +L
Sbjct: 365 GVLGLLQQDP---EAFFQ----ADTGGELSADDIAAMIQARADARKQKDFAEADRIRDEL 417
Query: 191 TRKGIALMDVRKETIWR 207
KG+ L D R+ T WR
Sbjct: 418 ADKGVILDDSREGTSWR 434
>gi|357054165|ref|ZP_09115256.1| cysteinyl-tRNA synthetase [Clostridium clostridioforme 2_1_49FAA]
gi|355385050|gb|EHG32103.1| cysteinyl-tRNA synthetase [Clostridium clostridioforme 2_1_49FAA]
Length = 469
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 24/138 (17%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ-LSLIESLLKIENEVKVV 129
KLR ++ M DD NT+ ++ F + +K N + + ++ +S ++++ ++ +
Sbjct: 353 KLRGKYEEAMDDDFNTADAISAIF-ELVKLANTTADESSTREFVSYMKTM------IEEL 405
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
DVLG++ E K+ E+ ++++ +IE R A+K K+F+ +D+IR
Sbjct: 406 CDVLGIITE----------------KKEEVLDSEIEEMIEARQQARKEKNFALADEIRGK 449
Query: 190 LTRKGIALMDVRKETIWR 207
L GI L D R+ W+
Sbjct: 450 LLDMGIILEDTREGVKWK 467
>gi|417902190|ref|ZP_12546059.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
gi|341843785|gb|EGS85006.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
Length = 466
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVQKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 80 MSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL 136
M DDLNT+ L G ++ +N K K Q ++LL++++ + VLGL
Sbjct: 358 MEDDLNTAAAL-GHIFGLVRLVNRIIEDKTMRKSAQAR--DALLRMQSMMARWGAVLGLF 414
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
+E L++++D R ++ V L+ ER A+K KDF +SD IR +L R G+
Sbjct: 415 TRQP--AEFLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIREELARMGVE 472
Query: 197 LMDVRKETIW 206
+ D W
Sbjct: 473 VQDTPAGAAW 482
>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|166200148|sp|A4IJG8.1|SYC_GEOTN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 467
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
+R F M DD NT++ + A L L N Q K ++I + L+ E + ++D
Sbjct: 351 IRASFIREMDDDFNTANGI--AVLFELAKQANLYLQEKTTSENVIHAFLR---EFEQLMD 405
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
VLGL LK+ EL + ++ LI +R A+KN+DF+ +D+IR +L
Sbjct: 406 VLGL-----------------TLKQEELLDEEIEALIRQRNEARKNRDFALADRIRDELK 448
Query: 192 RKGIALMDVRKETIWR 207
K I L D + T W+
Sbjct: 449 AKNIILEDTPQGTRWK 464
>gi|256855023|ref|ZP_05560384.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
gi|256709536|gb|EEU24583.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
Length = 470
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELGDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|365903452|ref|ZP_09441275.1| cysteinyl-tRNA synthetase [Lactobacillus malefermentans KCTC 3548]
Length = 469
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 23/154 (14%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA G+ P E I++++ E+ M DD N + ++ + L + N + +
Sbjct: 336 KDAEDGN-DPKIEQEIRQIQSEYIDAMDDDFNAQNGISEVY--ELAKLGNIYAERGLVEK 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
IE +L +E++ ++ V G+ L+ +L ++ + LI+ER
Sbjct: 393 GTIEFIL---SELQQMVLVFGI-----------------QLQSTQLEDDGIQTLIDERLE 432
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KN+DF++SD+IR L +G+ L D + T WR
Sbjct: 433 ARKNRDFARSDEIREQLKAQGVILEDTPQGTRWR 466
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 60 SITPA-AEDCIKKLRDE-FYTRMSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLI 116
I PA A D + DE F M DD NT+ + A L A+ IN ++ ++
Sbjct: 325 GIVPAKAADVPESEHDERFAEAMDDDFNTAGAI--AVLHAVANEINQHRRDGREDDAKQS 382
Query: 117 ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
++L V++ VLGLL + E Q A EL+ D+ +I+ RA A+K
Sbjct: 383 AAIL-----VRLG-GVLGLLQQDP---EAFFQ----ADTGGELSAEDIEAMIQARADARK 429
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+F+++D+IR +L KGI L D R+ T WR
Sbjct: 430 AKNFAEADRIRDELLEKGIILDDSREGTTWR 460
>gi|307296635|ref|ZP_07576455.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|422685649|ref|ZP_16743864.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
gi|306495971|gb|EFM65559.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|315029626|gb|EFT41558.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
Length = 478
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELGDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|452972575|gb|EME72404.1| cysteinyl-tRNA ligase [Bacillus sonorensis L12]
Length = 467
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I++ R F T M DD NT++ ++ F D K N Q K +I++ L + +E+
Sbjct: 347 IEEQRKAFETAMDDDFNTANAISVLF-DLAKHAN-YYLQEKNTAEHVIQAFLNLFDEI-- 402
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VLG +L+ EL + ++ LIE+R A++N+DF+ SDQIR
Sbjct: 403 -CSVLGF-----------------SLQEQELLDAEIEELIEKRNEARRNRDFATSDQIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D + T W+
Sbjct: 445 QLKSMNIILEDTPQGTRWK 463
>gi|423342556|ref|ZP_17320270.1| cysteinyl-tRNA synthetase [Parabacteroides johnsonii CL02T12C29]
gi|409217473|gb|EKN10449.1| cysteinyl-tRNA synthetase [Parabacteroides johnsonii CL02T12C29]
Length = 492
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K LR + Y M+DDLN+ I+ DA + IN+ K L ++ L + +
Sbjct: 364 VKDLRRKCYDAMNDDLNSP-IVIAHLFDAARTINSVKDGKATISLEDLKELQDVFH--TF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ D+LG+ E ++ + KA+ D+L I R AK NKD++ SD+IR
Sbjct: 421 IFDILGMKDEAASAGNNSNEAFGKAM--------DLLLTI--RQQAKANKDWATSDKIRN 470
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D + W+
Sbjct: 471 ELTAIGFEIKDTKDGAEWK 489
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 60 SITPA-AEDCIKKLRDE-FYTRMSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLI 116
I PA A D + DE F M DD NT+ + A L A+ IN ++ ++
Sbjct: 325 GIVPAKAADVPESEHDERFAEAMDDDFNTAGAI--AVLHAVANEINQHRRDGREDDAKQS 382
Query: 117 ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
++L V++ VLGLL + E Q A EL+ D+ +I+ RA A+K
Sbjct: 383 AAIL-----VRLG-GVLGLLQQDP---EAFFQ----ADTGGELSAEDIEAMIQARADARK 429
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K+F+++D+IR +L KGI L D R+ T WR
Sbjct: 430 AKNFAEADRIRDELLEKGIILDDSREGTTWR 460
>gi|218258486|ref|ZP_03474853.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
DSM 18315]
gi|218225458|gb|EEC98108.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
DSM 18315]
Length = 492
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K LR + Y M+DDLN+ I+ DA + IN+ K L ++ L + +
Sbjct: 364 VKDLRRKCYDAMNDDLNSP-IVIAHLFDAARTINSVKDGKATISLEDLKELQDVFH--TF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ D+LG+ E ++ + KA+ D+L I R AK NKD++ SD+IR
Sbjct: 421 IFDILGMKDEAASAGNNSNEAFGKAM--------DLLLTI--RQQAKANKDWATSDKIRN 470
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D + W+
Sbjct: 471 ELTAIGFEIKDTKDGAEWK 489
>gi|283769685|ref|ZP_06342577.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
gi|283459832|gb|EFC06922.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
Length = 471
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|153807261|ref|ZP_01959929.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
gi|423220511|ref|ZP_17207006.1| cysteinyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
gi|149130381|gb|EDM21591.1| cysteine--tRNA ligase [Bacteroides caccae ATCC 43185]
gi|392623588|gb|EIY17691.1| cysteinyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
Length = 493
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 59 GSITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQ 111
G +TPA+ +K+LR + Y M+DDLNT I+ + + INN +
Sbjct: 352 GKVTPASATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNVIAGNATISAE 410
Query: 112 QLSLIESLLKIENEVKVVLDVLGLLPE-GSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
L ++ + D++GL E GS+ S ++ A + V L+E+
Sbjct: 411 DLKELKETFHL-----FCFDIMGLKEEKGSSDS------RENAYGKV------VDMLLEQ 453
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
R AK NKD++ SD+IR LT G + D + WR
Sbjct: 454 RMKAKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQ-PKQQQLSLIESL 119
IT + L +F+ M D N++ L G F D +K IN ++ P +E L
Sbjct: 341 ITAKDRQKLDNLESDFHQAMDIDFNSAKAL-GRFFDTVKIINKVRQALPATPATRDLELL 399
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
+++ + + GLL E + L + +++ L ++ ++ L+ +R TA++N D
Sbjct: 400 RDSAAKLRELGGIFGLLQEDP--AAYLARRQERLLAGLDITPGEIEKLLAQRQTARQNGD 457
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWRPCVPVEQ 214
++++D+IR L K IA+ D T W + V Q
Sbjct: 458 WAEADRIRDLLAAKKIAIKDGPDGTSWEVQLSVHQ 492
>gi|75909922|ref|YP_324218.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|109894882|sp|Q3M6R3.1|SYC_ANAVT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|75703647|gb|ABA23323.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 486
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 151 DKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
D+ L + L++ D+ LIE+R A+KNK+FS+SD+IR +L +G+ L+D + T W
Sbjct: 428 DETLTQPGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQGVTLIDSPQGTRWH 484
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS-KKQPKQQQLSLIESL 119
IT + L D F+ M +D NT+ L F D +K +N + P++ + + L
Sbjct: 340 ITDKDRTALASLVDRFHQAMDNDFNTAQALAHLF-DTVKLLNKVLRTLPERPAAADLNLL 398
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
E + + VLGL+ +EV+ + K L +L E + LI +R A+ KD
Sbjct: 399 RTTAAEFRELAGVLGLVQRNP--AEVVAGNRAKILAGIDLDEETINGLITKRNQARAAKD 456
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIW 206
+S SD++R L I L D + T W
Sbjct: 457 WSTSDEVRDYLLEHRIVLKDSPEGTTW 483
>gi|239625541|ref|ZP_04668572.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519771|gb|EEQ59637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 469
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 42 LQDCEV-ALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
L+D E A Q A GS+ A KL F M DD NT+ ++ F + +K
Sbjct: 328 LRDLEAKAEGAAQTCAEQGSMEEAG-----KLLGRFEEAMDDDFNTADAISVVF-ELVKL 381
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N + + S LK ++ + DVLG++ E K+ E+
Sbjct: 382 ANTTADSGSTKAYV---SFLK--KNIEQLCDVLGIITE----------------KKEEVL 420
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++D+ +I R A+K+KDF+ +D+IR L GI L D R+ W+
Sbjct: 421 DSDIEEMIAARQQARKDKDFALADEIRGKLLDMGIVLEDTREGVKWK 467
>gi|335047314|ref|ZP_08540335.1| cysteine--tRNA ligase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761122|gb|EGL38677.1| cysteine--tRNA ligase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 262
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
E+ G I+ E L+ EF M DDLNT+ ++ + + I + + L
Sbjct: 135 EEREDGDISKLVE-----LKKEFLDCMDDDLNTADAISKVY----ELIRYTNTFDENTDL 185
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
+++ +K+ + VLGLL Y E L +K K LI+ER
Sbjct: 186 KVVKGAVKL---LSDFASVLGLL-----YKEEDDNLDEKVEK-----------LIKEREE 226
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KNKDF ++D+IR L I L D R IW+
Sbjct: 227 ARKNKDFKRADEIRDALKEMNIELKDTRNGVIWK 260
>gi|422697263|ref|ZP_16755208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
gi|315174139|gb|EFU18156.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
Length = 478
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++ K+ N
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQAAVSEPILV-AMDKLFNGW-- 414
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 415 -LAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|418016970|ref|ZP_12656529.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
gi|345527663|gb|EGX30971.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
Length = 447
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQEAMDDDFNTANGVTVLF-DMAKWINSGNYDQ------------TVKDAFEKMLQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E EVL + D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFE----EEVLDE--------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|340397950|ref|YP_004726975.1| cysteinyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
gi|338741943|emb|CCB92448.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus salivarius CCHSS3]
Length = 447
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQEAMDDDFNTANGVTVLF-DMAKWINSGNYDQ------------TVKDAFEKMLQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E EVL + D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFE----EEVLDE--------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|282915852|ref|ZP_06323617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
gi|282320148|gb|EFB50493.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
Length = 471
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D I+K +F + DD NT+ L G+ + ++ +NN K + + + K +
Sbjct: 344 DDVIRKGYIKFCEALDDDFNTAGAL-GSVFEIVRDLNNYLKDSASLDKNALINAKKFFDA 402
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE-LAENDVLHLIEERATAKKNKDFSKSD 184
V+ ++ V+G+ D AE L+ +++ LI+ER A++ +DF+++D
Sbjct: 403 VEEIMGVIGI---------------DTIFATAEELSPDEIEKLIKERNEARRKRDFARAD 447
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
IR +L KGI L D T W+
Sbjct: 448 AIRNELASKGIILEDTPLGTRWK 470
>gi|387762186|ref|YP_006069163.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
gi|339292953|gb|AEJ54300.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
Length = 440
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 336 DAFQEAMDDDFNTANGVTVLF-DMAKWINSGNYDQ------------TVKDAFEKMLQVF 382
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E EVL + D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 383 GIVFE----EEVLDE--------------DIEKLIEERQAARANKDFATADRIRDELAAQ 424
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 425 GIKLLDTKEGVRW 437
>gi|387783222|ref|YP_006069305.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
gi|338744104|emb|CCB94470.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
Length = 447
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DTFQEAMDDDFNTANGVTVLF-DMAKWINSGNYDQ------------TVKDAFEKMLQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E EVL + D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFE----EEVLDE--------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|260437953|ref|ZP_05791769.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
gi|292809704|gb|EFF68909.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
Length = 472
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF-INNSKKQPKQQQLSLIESLLKIEN 124
E+ R++F + DLNTS +T D L+ IN+ K L LI+S ++
Sbjct: 352 EEAFAGFRNKFEDAICSDLNTSSAIT-VIYDVLRSDINDVTK------LELIKSFDEV-- 402
Query: 125 EVKVVLDVL---GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
+ LD+L G E S SE LK LA+ IEER AKK KDF+
Sbjct: 403 ---LSLDLLKDHGNDKESSVDSE---------LKEYILAK------IEERKAAKKEKDFA 444
Query: 182 KSDQIRADLTRKGIALMDVRKETIW 206
K+D IR +L KGI + D R+ T+W
Sbjct: 445 KADAIRDELAAKGIQIKDTREGTVW 469
>gi|258422624|ref|ZP_05685530.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|257847196|gb|EEV71204.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
Length = 471
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|189461692|ref|ZP_03010477.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
gi|189431579|gb|EDV00564.1| cysteine--tRNA ligase [Bacteroides coprocola DSM 17136]
Length = 492
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
+ I PA LR++ Y M+DDLNT +++ F DA++ IN + +E
Sbjct: 360 TSGIEPAG------LREKCYEAMNDDLNTPIVISHLF-DAIRMINTVIDKKATISADDLE 412
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
L + + V D+LGL E + R E V L+E+R AK N
Sbjct: 413 ELKSVFH--TFVFDILGLKAEAENNA-----------AREEAFGKVVDMLLEQRMQAKAN 459
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KD++ SD+IR L G + D + W+
Sbjct: 460 KDWATSDKIRDTLAALGFEVKDTKDGFTWK 489
>gi|253732537|ref|ZP_04866702.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|417654167|ref|ZP_12303894.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|417796798|ref|ZP_12444002.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
gi|418643870|ref|ZP_13206025.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|421149294|ref|ZP_15608952.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443638297|ref|ZP_21122344.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
gi|448744000|ref|ZP_21725905.1| cysteinyl-tRNA synthetase [Staphylococcus aureus KT/Y21]
gi|253729466|gb|EES98195.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|329731981|gb|EGG68337.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|334268184|gb|EGL86629.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
gi|375027296|gb|EHS20661.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|394330211|gb|EJE56303.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443409734|gb|ELS68226.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
gi|445562739|gb|ELY18905.1| cysteinyl-tRNA synthetase [Staphylococcus aureus KT/Y21]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 447
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D F M DD NT++ +T F D K+IN+ +++ + +L V
Sbjct: 343 DAFQEAMDDDFNTANGVTVLF-DMAKWINSGNYDQ------------TVKDAFEKMLQVF 389
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E EVL + D+ LIEER A+ NKDF+ +D+IR +L +
Sbjct: 390 GIVFE----EEVLDE--------------DIEKLIEERQAARANKDFATADRIRDELAAQ 431
Query: 194 GIALMDVRKETIW 206
GI L+D ++ W
Sbjct: 432 GIKLLDTKEGVRW 444
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ R+ F M DD NT + F D + IN + K +L+ L I
Sbjct: 340 VQDTRERFEAAMDDDFNTPKAIAVLF-DLVNEINKKEGAEKNPLAALLVELSSI------ 392
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRA-ELAENDVLHLIEERATAKKNKDFSKSDQIR 187
LG LQ D L+R L + + I+ERA AKK+KDF+ +D+IR
Sbjct: 393 ----LG----------CLQSDPDNYLQRGVTLDDAYIQGKIQERAQAKKDKDFALADKIR 438
Query: 188 ADLTRKGIALMDVRKETIW 206
DL +GI L D R+ T W
Sbjct: 439 EDLDAQGIILQDSREGTTW 457
>gi|418885823|ref|ZP_13439973.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377727121|gb|EHT51228.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1150]
Length = 442
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 319 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 373
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 374 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 419
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 420 RDMLKSQNIILED 432
>gi|284040387|ref|YP_003390317.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
gi|283819680|gb|ADB41518.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
Length = 499
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 23/159 (14%)
Query: 51 PFQEDARSG-SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK 109
P +A +G ++ A + I+K +FY M+DDLNT+ + LK++N
Sbjct: 357 PSDAEAENGVAVDEAKQKEIQKAVQQFYDAMNDDLNTA-VAIAQLFTLLKYVNMLYLNQL 415
Query: 110 QQQLSLIES--LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL 167
Q + E+ LLK E+ V + DVLGLL EG+T VL+ L L L
Sbjct: 416 QAAVLGEETFNLLK-ESFVTFMQDVLGLLEEGATNQPVLEGL---------------LTL 459
Query: 168 IEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+E K+ + + K DQIR+ +G+A+ D++ + W
Sbjct: 460 YKEY---KEQRQYDKVDQIRSYFKAQGLAIKDMKHQIDW 495
>gi|417899727|ref|ZP_12543628.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
gi|341844335|gb|EGS85552.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|258452738|ref|ZP_05700736.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|282924443|ref|ZP_06332115.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|257859611|gb|EEV82461.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|282592854|gb|EFB97858.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
Length = 471
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|257795372|ref|ZP_05644351.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|258408941|ref|ZP_05681222.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|258420421|ref|ZP_05683364.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|258439342|ref|ZP_05690274.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|258444082|ref|ZP_05692419.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|258446350|ref|ZP_05694508.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|258448443|ref|ZP_05696558.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|258453799|ref|ZP_05701773.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282894964|ref|ZP_06303187.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|282928866|ref|ZP_06336457.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|257789344|gb|EEV27684.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|257840292|gb|EEV64755.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|257843611|gb|EEV68017.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|257847679|gb|EEV71678.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|257850752|gb|EEV74697.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|257854944|gb|EEV77889.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|257858312|gb|EEV81199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|257864055|gb|EEV86809.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282589474|gb|EFB94563.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|282762646|gb|EFC02783.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
Length = 471
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 348 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 403 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 448
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 449 RDMLKSQNIILED 461
>gi|257418802|ref|ZP_05595796.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
gi|257160630|gb|EEU90590.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
Length = 470
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|160947200|ref|ZP_02094367.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
gi|158446334|gb|EDP23329.1| cysteine--tRNA ligase [Parvimonas micra ATCC 33270]
Length = 461
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 28/154 (18%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
E+ G I+ E L+ EF M DDLNT+ ++ + + I + + L
Sbjct: 334 EEKEDGDISKLVE-----LKKEFLDCMDDDLNTADAISKVY----ELIRYTNTFGENTDL 384
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
+++ +K+ ++ VLGLL Y E L +K K LI+ER
Sbjct: 385 KVVKGAVKLLSDFA---SVLGLL-----YKEEDDNLDEKVEK-----------LIKEREE 425
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+KNKDF ++D+IR L I L D R IW+
Sbjct: 426 ARKNKDFKRADEIRDALKEMNIELKDTRNGVIWK 459
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 42 LQDCEVALSPF-QEDARSGSITPAAEDCIKK------LRDEFYTRMSDDLNTSHILTGAF 94
L+D + LS F Q + + +D IK +F M+DD NT L F
Sbjct: 313 LKDTQKVLSRFYQAIYHAQPFIASKDDAIKTELNSNPFIQKFNQAMNDDFNTPEALVICF 372
Query: 95 LDALKFINNS-KKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
D LK +N + K++ ++ + + LL I N +L++ PE + LK A
Sbjct: 373 -DLLKQLNIALKEESPEKVIKNYQLLLWIGN----ILNIFQYDPE--------KILKHSA 419
Query: 154 LKR-AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ + L+E ++ I R TA+ NK ++ +DQIR L + GI L D + +TIWR
Sbjct: 420 SEQDSPLSEQEIQEAILARNTARSNKQYALADQIRQKLLQSGILLEDTQTQTIWR 474
>gi|408422961|emb|CCJ10372.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408424949|emb|CCJ12336.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408426938|emb|CCJ14301.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408428926|emb|CCJ26091.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408430914|emb|CCJ18229.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408432908|emb|CCJ20193.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408434897|emb|CCJ22157.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408436882|emb|CCJ24125.1| Cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
Length = 453
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 330 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 384
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 385 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 430
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 431 RDMLKSQNIILED 443
>gi|419785902|ref|ZP_14311646.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
gi|383361711|gb|EID39077.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|384546810|ref|YP_005736063.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED133]
gi|417902890|ref|ZP_12546751.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
gi|298693861|gb|ADI97083.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED133]
gi|341850509|gb|EGS91627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|82750237|ref|YP_415978.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|109894947|sp|Q2YSD1.1|SYC_STAAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82655768|emb|CAI80168.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|418312793|ref|ZP_12924301.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
gi|365237707|gb|EHM78552.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
Length = 442
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 319 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 373
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 374 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 419
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 420 RDMLKSQNIILED 432
>gi|387601884|ref|YP_005733405.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ST398]
gi|404477916|ref|YP_006709346.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
gi|418310605|ref|ZP_12922141.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|283469822|emb|CAQ49033.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ST398]
gi|365236309|gb|EHM77205.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|404439405|gb|AFR72598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|57634618|ref|NP_371054.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
Length = 476
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 353 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 407
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 408 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 453
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 454 RDMLKSQNIILED 466
>gi|417890357|ref|ZP_12534434.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
gi|418308138|ref|ZP_12919791.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
gi|418888430|ref|ZP_13442567.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
gi|341855084|gb|EGS95938.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
gi|365241618|gb|EHM82362.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
gi|377754882|gb|EHT78787.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 466
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|229828827|ref|ZP_04454896.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
14600]
gi|229791990|gb|EEP28104.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
14600]
Length = 468
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D+F M DD NT+ L F + +KFIN+ ++L+ + + + V
Sbjct: 355 DKFNGAMDDDCNTADALAAIF-ELVKFINSRAAGQISRELAD-----QFYQRLDTLTQVC 408
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL +L Q +D + ++ LIEER A++ KDF+++D+IR DL +
Sbjct: 409 GL---------ILDQKEDNL-------DAEIDSLIEERQEARRQKDFARADRIRDDLLAR 452
Query: 194 GIALMDVRKETIWR 207
GI L D R+ W
Sbjct: 453 GIVLEDTREGVKWH 466
>gi|418282552|ref|ZP_12895317.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
gi|365169553|gb|EHM60799.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|379020300|ref|YP_005296962.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M013]
gi|387779669|ref|YP_005754467.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
LGA251]
gi|417895940|ref|ZP_12539916.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
gi|418950123|ref|ZP_13502325.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
gi|341841146|gb|EGS82609.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
gi|344176771|emb|CCC87233.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
LGA251]
gi|359829609|gb|AEV77587.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M013]
gi|375377647|gb|EHS81098.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|69245493|ref|ZP_00603457.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257879803|ref|ZP_05659456.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257882529|ref|ZP_05662182.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257891644|ref|ZP_05671297.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257894121|ref|ZP_05673774.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|260559477|ref|ZP_05831658.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
gi|261206628|ref|ZP_05921326.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289564989|ref|ZP_06445443.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|293564124|ref|ZP_06678530.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
gi|293570060|ref|ZP_06681140.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
gi|294614954|ref|ZP_06694845.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
gi|294618278|ref|ZP_06697860.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
gi|294623060|ref|ZP_06701947.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
gi|314940063|ref|ZP_07847246.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|314942530|ref|ZP_07849369.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|314949364|ref|ZP_07852705.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|314952824|ref|ZP_07855796.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|314993743|ref|ZP_07859088.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|314994808|ref|ZP_07859940.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|383329969|ref|YP_005355853.1| cysteinyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|389869785|ref|YP_006377208.1| cysteine--tRNA ligase [Enterococcus faecium DO]
gi|406579438|ref|ZP_11054669.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|406581853|ref|ZP_11056988.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|406585276|ref|ZP_11060269.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|406589842|ref|ZP_11064261.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410937681|ref|ZP_11369540.1| cysteine--tRNA ligase [Enterococcus sp. GMD5E]
gi|416132949|ref|ZP_11597975.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4452]
gi|424791471|ref|ZP_18217883.1| cysteine--tRNA ligase [Enterococcus faecium V689]
gi|424797318|ref|ZP_18222916.1| cysteine--tRNA ligase [Enterococcus faecium S447]
gi|424849970|ref|ZP_18274397.1| cysteine--tRNA ligase [Enterococcus faecium R501]
gi|424858127|ref|ZP_18282173.1| cysteine--tRNA ligase [Enterococcus faecium R499]
gi|424866106|ref|ZP_18289956.1| cysteine--tRNA ligase [Enterococcus faecium R497]
gi|424952062|ref|ZP_18367100.1| cysteine--tRNA ligase [Enterococcus faecium R496]
gi|424952352|ref|ZP_18367378.1| cysteine--tRNA ligase [Enterococcus faecium R494]
gi|424955590|ref|ZP_18370418.1| cysteine--tRNA ligase [Enterococcus faecium R446]
gi|424961722|ref|ZP_18376141.1| cysteine--tRNA ligase [Enterococcus faecium P1986]
gi|424964575|ref|ZP_18378653.1| cysteine--tRNA ligase [Enterococcus faecium P1190]
gi|424967536|ref|ZP_18381229.1| cysteine--tRNA ligase [Enterococcus faecium P1140]
gi|424972650|ref|ZP_18385974.1| cysteine--tRNA ligase [Enterococcus faecium P1139]
gi|424975556|ref|ZP_18388708.1| cysteine--tRNA ligase [Enterococcus faecium P1137]
gi|424979370|ref|ZP_18392227.1| cysteine--tRNA ligase [Enterococcus faecium P1123]
gi|424982258|ref|ZP_18394934.1| cysteine--tRNA ligase [Enterococcus faecium ERV99]
gi|424985930|ref|ZP_18398387.1| cysteine--tRNA ligase [Enterococcus faecium ERV69]
gi|424989175|ref|ZP_18401458.1| cysteine--tRNA ligase [Enterococcus faecium ERV38]
gi|424992490|ref|ZP_18404547.1| cysteine--tRNA ligase [Enterococcus faecium ERV26]
gi|424995207|ref|ZP_18407104.1| cysteine--tRNA ligase [Enterococcus faecium ERV168]
gi|424998065|ref|ZP_18409781.1| cysteine--tRNA ligase [Enterococcus faecium ERV165]
gi|425000474|ref|ZP_18412037.1| cysteine--tRNA ligase [Enterococcus faecium ERV161]
gi|425004932|ref|ZP_18416215.1| cysteine--tRNA ligase [Enterococcus faecium ERV102]
gi|425008230|ref|ZP_18419323.1| cysteine--tRNA ligase [Enterococcus faecium ERV1]
gi|425011251|ref|ZP_18422160.1| cysteine--tRNA ligase [Enterococcus faecium E422]
gi|425015207|ref|ZP_18425843.1| cysteine--tRNA ligase [Enterococcus faecium E417]
gi|425017730|ref|ZP_18428226.1| cysteine--tRNA ligase [Enterococcus faecium C621]
gi|425022071|ref|ZP_18432281.1| cysteine--tRNA ligase [Enterococcus faecium C497]
gi|425026402|ref|ZP_18434867.1| cysteine--tRNA ligase [Enterococcus faecium C1904]
gi|425033072|ref|ZP_18438075.1| cysteine--tRNA ligase [Enterococcus faecium 515]
gi|425035951|ref|ZP_18440754.1| cysteine--tRNA ligase [Enterococcus faecium 514]
gi|425039275|ref|ZP_18443829.1| cysteine--tRNA ligase [Enterococcus faecium 513]
gi|425042932|ref|ZP_18447208.1| cysteine--tRNA ligase [Enterococcus faecium 511]
gi|425046856|ref|ZP_18450844.1| cysteine--tRNA ligase [Enterococcus faecium 510]
gi|425049951|ref|ZP_18453731.1| cysteine--tRNA ligase [Enterococcus faecium 509]
gi|425053597|ref|ZP_18457131.1| cysteine--tRNA ligase [Enterococcus faecium 506]
gi|425061178|ref|ZP_18464438.1| cysteine--tRNA ligase [Enterococcus faecium 503]
gi|427397717|ref|ZP_18890199.1| cysteinyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430832519|ref|ZP_19450562.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430837210|ref|ZP_19455185.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430839997|ref|ZP_19457932.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430845314|ref|ZP_19463208.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430847106|ref|ZP_19464953.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430856319|ref|ZP_19474016.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1392]
gi|430859157|ref|ZP_19476773.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430861076|ref|ZP_19478668.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430964209|ref|ZP_19487657.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1576]
gi|431014762|ref|ZP_19490304.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1578]
gi|431265396|ref|ZP_19506098.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1623]
gi|431312167|ref|ZP_19508817.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1626]
gi|431387213|ref|ZP_19511576.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1627]
gi|431510864|ref|ZP_19515880.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1634]
gi|431561029|ref|ZP_19519661.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1731]
gi|431668746|ref|ZP_19524108.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1904]
gi|431749903|ref|ZP_19538633.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2297]
gi|431756152|ref|ZP_19544790.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2883]
gi|431768583|ref|ZP_19557018.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1321]
gi|431771779|ref|ZP_19560156.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1644]
gi|431774710|ref|ZP_19563015.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2369]
gi|431777704|ref|ZP_19565955.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2560]
gi|431780400|ref|ZP_19568579.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4389]
gi|431783198|ref|ZP_19571320.1| cysteinyl-tRNA synthetase [Enterococcus faecium E6012]
gi|431784154|ref|ZP_19572199.1| cysteinyl-tRNA synthetase [Enterococcus faecium E6045]
gi|447913858|ref|YP_007395270.1| Cysteinyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
gi|68195744|gb|EAN10181.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257814031|gb|EEV42789.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257818187|gb|EEV45515.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257828004|gb|EEV54630.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257830500|gb|EEV57107.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|260074576|gb|EEW62897.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
gi|260079121|gb|EEW66814.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289163196|gb|EFD11042.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|291587432|gb|EFF19316.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
gi|291592240|gb|EFF23858.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
gi|291595494|gb|EFF26805.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
gi|291597533|gb|EFF28697.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
gi|291604042|gb|EFF33570.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
gi|313590992|gb|EFR69837.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|313591843|gb|EFR70688.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|313595058|gb|EFR73903.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|313598751|gb|EFR77596.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|313640663|gb|EFS05243.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|313644195|gb|EFS08775.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|364093174|gb|EHM35473.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4452]
gi|378939663|gb|AFC64735.1| cysteinyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|388535034|gb|AFK60226.1| cysteine--tRNA ligase [Enterococcus faecium DO]
gi|402916320|gb|EJX37202.1| cysteine--tRNA ligase [Enterococcus faecium R501]
gi|402919236|gb|EJX39854.1| cysteine--tRNA ligase [Enterococcus faecium V689]
gi|402921282|gb|EJX41738.1| cysteine--tRNA ligase [Enterococcus faecium S447]
gi|402927198|gb|EJX47178.1| cysteine--tRNA ligase [Enterococcus faecium R499]
gi|402927778|gb|EJX47708.1| cysteine--tRNA ligase [Enterococcus faecium R496]
gi|402939067|gb|EJX58021.1| cysteine--tRNA ligase [Enterococcus faecium R497]
gi|402941466|gb|EJX60192.1| cysteine--tRNA ligase [Enterococcus faecium R494]
gi|402942624|gb|EJX61193.1| cysteine--tRNA ligase [Enterococcus faecium P1986]
gi|402946289|gb|EJX64572.1| cysteine--tRNA ligase [Enterococcus faecium P1190]
gi|402948326|gb|EJX66474.1| cysteine--tRNA ligase [Enterococcus faecium R446]
gi|402953209|gb|EJX70943.1| cysteine--tRNA ligase [Enterococcus faecium P1137]
gi|402953280|gb|EJX71013.1| cysteine--tRNA ligase [Enterococcus faecium P1139]
gi|402954165|gb|EJX71809.1| cysteine--tRNA ligase [Enterococcus faecium P1140]
gi|402958392|gb|EJX75706.1| cysteine--tRNA ligase [Enterococcus faecium P1123]
gi|402961499|gb|EJX78526.1| cysteine--tRNA ligase [Enterococcus faecium ERV99]
gi|402964891|gb|EJX81642.1| cysteine--tRNA ligase [Enterococcus faecium ERV69]
gi|402969687|gb|EJX86080.1| cysteine--tRNA ligase [Enterococcus faecium ERV38]
gi|402973136|gb|EJX89282.1| cysteine--tRNA ligase [Enterococcus faecium ERV26]
gi|402977977|gb|EJX93745.1| cysteine--tRNA ligase [Enterococcus faecium ERV168]
gi|402984310|gb|EJX99628.1| cysteine--tRNA ligase [Enterococcus faecium ERV165]
gi|402988120|gb|EJY03142.1| cysteine--tRNA ligase [Enterococcus faecium ERV102]
gi|402989110|gb|EJY04063.1| cysteine--tRNA ligase [Enterococcus faecium ERV161]
gi|402993069|gb|EJY07715.1| cysteine--tRNA ligase [Enterococcus faecium ERV1]
gi|402996425|gb|EJY10808.1| cysteine--tRNA ligase [Enterococcus faecium E417]
gi|402997570|gb|EJY11887.1| cysteine--tRNA ligase [Enterococcus faecium E422]
gi|403003792|gb|EJY17648.1| cysteine--tRNA ligase [Enterococcus faecium C621]
gi|403004396|gb|EJY18210.1| cysteine--tRNA ligase [Enterococcus faecium C497]
gi|403005627|gb|EJY19318.1| cysteine--tRNA ligase [Enterococcus faecium C1904]
gi|403011400|gb|EJY24712.1| cysteine--tRNA ligase [Enterococcus faecium 515]
gi|403016382|gb|EJY29204.1| cysteine--tRNA ligase [Enterococcus faecium 514]
gi|403016684|gb|EJY29488.1| cysteine--tRNA ligase [Enterococcus faecium 513]
gi|403021732|gb|EJY34162.1| cysteine--tRNA ligase [Enterococcus faecium 511]
gi|403023081|gb|EJY35371.1| cysteine--tRNA ligase [Enterococcus faecium 510]
gi|403025023|gb|EJY37134.1| cysteine--tRNA ligase [Enterococcus faecium 509]
gi|403029550|gb|EJY41300.1| cysteine--tRNA ligase [Enterococcus faecium 506]
gi|403041879|gb|EJY52860.1| cysteine--tRNA ligase [Enterococcus faecium 503]
gi|404455474|gb|EKA02321.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|404459041|gb|EKA05414.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|404462919|gb|EKA08623.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|404470243|gb|EKA14896.1| cysteinyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410733814|gb|EKQ75736.1| cysteine--tRNA ligase [Enterococcus sp. GMD5E]
gi|425722028|gb|EKU84928.1| cysteinyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430479805|gb|ELA57015.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430487640|gb|ELA64360.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430490105|gb|ELA66650.1| cysteinyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430495719|gb|ELA71855.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430537779|gb|ELA78094.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430544245|gb|ELA84285.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430545009|gb|ELA85011.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1392]
gi|430550665|gb|ELA90448.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430555270|gb|ELA94814.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1576]
gi|430559586|gb|ELA98934.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1578]
gi|430576231|gb|ELB14900.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1623]
gi|430579116|gb|ELB17652.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1626]
gi|430580770|gb|ELB19236.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1627]
gi|430586732|gb|ELB24983.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1634]
gi|430589870|gb|ELB27970.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1731]
gi|430599912|gb|ELB37594.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1904]
gi|430610854|gb|ELB47984.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2297]
gi|430615607|gb|ELB52551.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2883]
gi|430629002|gb|ELB65424.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1321]
gi|430632769|gb|ELB68970.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1644]
gi|430633595|gb|ELB69750.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2369]
gi|430638997|gb|ELB74888.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2560]
gi|430639812|gb|ELB75667.1| cysteinyl-tRNA synthetase [Enterococcus faecium E4389]
gi|430645871|gb|ELB81373.1| cysteinyl-tRNA synthetase [Enterococcus faecium E6012]
gi|430650195|gb|ELB85549.1| cysteinyl-tRNA synthetase [Enterococcus faecium E6045]
gi|445189567|gb|AGE31209.1| Cysteinyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QPK L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPKVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF +SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFVRSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|15926207|ref|NP_373740.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|148266989|ref|YP_001245932.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150393036|ref|YP_001315711.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156978858|ref|YP_001441117.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|253315639|ref|ZP_04838852.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255005323|ref|ZP_05143924.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|269202152|ref|YP_003281421.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|295406906|ref|ZP_06816709.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|296275775|ref|ZP_06858282.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
gi|297246270|ref|ZP_06930119.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|384863858|ref|YP_005749217.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|387149690|ref|YP_005741254.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|415694004|ref|ZP_11455609.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS03]
gi|417650789|ref|ZP_12300554.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|417801353|ref|ZP_12448446.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|417893575|ref|ZP_12537601.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|418423702|ref|ZP_12996849.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426646|ref|ZP_12999672.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS2]
gi|418432467|ref|ZP_13005267.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436181|ref|ZP_13007998.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439080|ref|ZP_13010801.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442060|ref|ZP_13013677.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445188|ref|ZP_13016679.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448128|ref|ZP_13019533.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450952|ref|ZP_13022294.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453969|ref|ZP_13025242.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456873|ref|ZP_13028088.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418566855|ref|ZP_13131223.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|418639529|ref|ZP_13201774.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|418654858|ref|ZP_13216751.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|418662546|ref|ZP_13224090.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
gi|418877379|ref|ZP_13431618.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880236|ref|ZP_13434456.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883163|ref|ZP_13437363.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418893989|ref|ZP_13448090.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913720|ref|ZP_13467693.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919345|ref|ZP_13473291.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930559|ref|ZP_13484407.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418990424|ref|ZP_13538085.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|424775949|ref|ZP_18202936.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
gi|443637211|ref|ZP_21121296.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
gi|21264022|sp|Q99W73.1|SYC_STAAN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56749452|sp|Q932G0.2|SYC_STAAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171769940|sp|A7WYU7.1|SYC_STAA1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189082076|sp|A6TZ06.1|SYC_STAA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189082077|sp|A5IQ83.1|SYC_STAA9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|13700420|dbj|BAB41718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|46395518|dbj|BAB56692.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147740058|gb|ABQ48356.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149945488|gb|ABR51424.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156720993|dbj|BAF77410.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|262074442|gb|ACY10415.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|285816229|gb|ADC36716.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|294968137|gb|EFG44163.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297176868|gb|EFH36126.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|312829025|emb|CBX33867.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128822|gb|EFT84821.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727911|gb|EGG64360.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|334276879|gb|EGL95122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|341854346|gb|EGS95217.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|371983600|gb|EHP00742.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|375014255|gb|EHS07947.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|375017169|gb|EHS10791.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|375036045|gb|EHS29132.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
gi|377696087|gb|EHT20443.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377698337|gb|EHT22685.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377716276|gb|EHT40459.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377716426|gb|EHT40608.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377722546|gb|EHT46671.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377732674|gb|EHT56724.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377758326|gb|EHT82211.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767310|gb|EHT91108.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC348]
gi|387721084|gb|EIK08971.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722494|gb|EIK10292.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS1]
gi|387727533|gb|EIK15046.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729541|gb|EIK16976.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS5]
gi|387731581|gb|EIK18863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738384|gb|EIK25427.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739635|gb|EIK26631.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS9]
gi|387739797|gb|EIK26780.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS7]
gi|387746900|gb|EIK33620.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748310|gb|EIK34999.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749115|gb|EIK35759.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402346728|gb|EJU81805.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
gi|443406089|gb|ELS64674.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 31/175 (17%)
Query: 37 NETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF-- 94
N I +++ E+A + + D + A + IK+ R +FY M DD NT+ L F
Sbjct: 325 NIRIAMENAELAYTWDENDFK-------AYNSIKEARRKFYEAMDDDFNTAEALKAVFEV 377
Query: 95 LDAL-KFINNSKKQPKQQQLSLIESLLKIENEV-KVVLDVLGLLPEGSTYSEVLQQLKDK 152
+A+ K+I ++K PK ES+L+ E + V ++ G+ E + ++ K
Sbjct: 378 SNAINKYITEAEK-PK-------ESVLRKAWEFFRTVGEIFGIFEEYFKEEKAKEEEKLI 429
Query: 153 ALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L LI+ RA +K + F +D+IR +L + GI L D KETIW+
Sbjct: 430 EL------------LIQVRAELRKERKFELADKIREELRKLGIQLEDKGKETIWK 472
>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [[Clostridium] sticklandii]
Length = 443
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
++ RD F M DD+NT+ ++ F + +F N + + L E L + NE+
Sbjct: 322 ALENHRDRFIEAMDDDINTADAISIIF-ELARFSNTNVTE--NSSLEWAEKNLSLFNELT 378
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
VL+++ S +E +++L I++R AKKNKDF+ +D IR
Sbjct: 379 GVLNIIKAEDTDSNDNEQIEKL------------------IKDRVEAKKNKDFALADAIR 420
Query: 188 ADLTRKGIALMDVRKETIWRPC 209
+L GI + D R+ T W+
Sbjct: 421 DELKSMGIEIEDTRQGTKWKKV 442
>gi|57651406|ref|YP_185462.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87160084|ref|YP_493218.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194292|ref|YP_499084.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220704|ref|YP_001331526.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|262049572|ref|ZP_06022441.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
gi|262052418|ref|ZP_06024618.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|284023539|ref|ZP_06377937.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
gi|294850305|ref|ZP_06791039.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|379013811|ref|YP_005290047.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VC40]
gi|384549394|ref|YP_005738646.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|386830173|ref|YP_006236827.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|415688905|ref|ZP_11452420.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|417648384|ref|ZP_12298210.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|417798450|ref|ZP_12445616.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|418286177|ref|ZP_12898828.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|418318077|ref|ZP_12929491.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|418320309|ref|ZP_12931670.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|418559671|ref|ZP_13124206.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
gi|418569637|ref|ZP_13133956.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|418578420|ref|ZP_13142515.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418646204|ref|ZP_13208315.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|418656950|ref|ZP_13218734.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|418658752|ref|ZP_13220461.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|418874547|ref|ZP_13428813.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418902793|ref|ZP_13456834.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418905102|ref|ZP_13459131.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911198|ref|ZP_13465181.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|418924757|ref|ZP_13478660.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418927845|ref|ZP_13481731.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418993244|ref|ZP_13540883.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
gi|419774832|ref|ZP_14300786.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|422744666|ref|ZP_16798621.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745099|ref|ZP_16799045.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|440707555|ref|ZP_20888250.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
gi|440734004|ref|ZP_20913617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|61216110|sp|Q5HIE5.1|SYC_STAAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|109894946|sp|Q2FJB0.1|SYC_STAA3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123291881|sp|Q2G2M6.1|SYC_STAA8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|172048774|sp|A6QEI2.1|SYC_STAAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631648|sp|A8YZM7.2|SYC_STAAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57285592|gb|AAW37686.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87126058|gb|ABD20572.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201850|gb|ABD29660.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373504|dbj|BAF66764.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|259159664|gb|EEW44708.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|259162312|gb|EEW46885.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
gi|294822817|gb|EFG39252.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|302332243|gb|ADL22436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|315196659|gb|EFU27006.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141606|gb|EFW33445.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320141766|gb|EFW33594.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329731047|gb|EGG67420.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|334275780|gb|EGL94055.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|365167731|gb|EHM59108.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|365227495|gb|EHM68689.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|365244318|gb|EHM84979.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|371974514|gb|EHO91844.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
gi|371985449|gb|EHP02517.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|374362508|gb|AEZ36613.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VC40]
gi|375031950|gb|EHS25210.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|375033404|gb|EHS26597.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|375037652|gb|EHS30671.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|377696447|gb|EHT20802.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377724576|gb|EHT48691.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|377737757|gb|EHT61766.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377741808|gb|EHT65793.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377746052|gb|EHT70023.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377747207|gb|EHT71173.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
gi|377766642|gb|EHT90475.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377771887|gb|EHT95640.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|383971333|gb|EID87411.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|385195565|emb|CCG15174.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|436431899|gb|ELP29251.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436505877|gb|ELP41736.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|418599337|ref|ZP_13162826.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
gi|374397444|gb|EHQ68654.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|227873421|ref|ZP_03991676.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
gi|227840726|gb|EEJ51101.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
Length = 468
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F +M DDLNT+ +T F + ++ N + ++ + E+LL+ +++ ++ VLG+
Sbjct: 357 FSEKMEDDLNTADAITQIF-ELVRLANATVEEHSSKAYG--EALLQ---KLETLMAVLGI 410
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
E K+ E V LI++R A+KNKDF+K+DQIR +L GI
Sbjct: 411 RTE----------------KKEEELGAKVEALIQQRQDARKNKDFAKADQIRDELLAMGI 454
Query: 196 ALMDVRKETIWR 207
L D R W+
Sbjct: 455 QLKDTRNGVEWQ 466
>gi|21282214|ref|NP_645302.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49485394|ref|YP_042615.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208757|ref|ZP_06925185.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300912847|ref|ZP_07130289.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|418315226|ref|ZP_12926690.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|418933460|ref|ZP_13487284.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987430|ref|ZP_13535103.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
gi|448741472|ref|ZP_21723436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus KT/314250]
gi|24418688|sp|Q8NXY7.1|SYC_STAAW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56749395|sp|Q6GBV8.1|SYC_STAAS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|21203650|dbj|BAB94350.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49243837|emb|CAG42262.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886702|gb|EFH25607.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300885951|gb|EFK81154.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|365243856|gb|EHM84524.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|377719218|gb|EHT43388.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377771240|gb|EHT94994.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|445547773|gb|ELY16035.1| cysteinyl-tRNA synthetase [Staphylococcus aureus KT/314250]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|424843017|ref|ZP_18267642.1| cysteinyl-tRNA synthetase [Saprospira grandis DSM 2844]
gi|395321215|gb|EJF54136.1| cysteinyl-tRNA synthetase [Saprospira grandis DSM 2844]
Length = 507
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILT---GAFLDALKFINNSKKQPKQQQLSLI--ESLLKIE 123
I KL D + + +DLNT L G D KF N QQ L I E+L +++
Sbjct: 374 INKLLDGAFAELDEDLNTPKALAKIFGLVSDIQKFTNG------QQDLGSIAPETLARLK 427
Query: 124 NEVK-VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+ +V DV GL E + + Q +DK L + +IE+R A+ NKD++K
Sbjct: 428 KDFSAIVFDVFGLQKE----ALIGQSDEDKTLLDGLMQ-----MIIEQRQEARANKDWTK 478
Query: 183 SDQIRADLTRKGIALMDVRKETIW 206
SDQIR L G+ + D ++ + W
Sbjct: 479 SDQIRDALQALGLQIKDGKEGSSW 502
>gi|385780795|ref|YP_005756966.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
11819-97]
gi|418573435|ref|ZP_13137629.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
gi|364521784|gb|AEW64534.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
11819-97]
gi|371981800|gb|EHO98962.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|291519016|emb|CBK74237.1| cysteinyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
Length = 475
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
Query: 64 AAEDCIK-KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
A ++ +K + ++F +S+DLNTS +T DALK +L+L+ES K+
Sbjct: 350 AVDEAVKSEFEEKFCEAVSNDLNTSMAIT-ILYDALK-----ADTSDATKLALVESFDKV 403
Query: 123 ENEVKVVLDVLG----LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ LD++G L GS+ L+ + A+ R RA AKK K
Sbjct: 404 -----LSLDLIGHAKALGEAGSSVDAELEAYINDAIAR--------------RAEAKKAK 444
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
DF+ +D IR +L KG+ + D R+ +W
Sbjct: 445 DFATADAIRDELLAKGVEIKDTREGVVWH 473
>gi|256761895|ref|ZP_05502475.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256683146|gb|EEU22841.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|386287683|ref|ZP_10064854.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
gi|385279193|gb|EIF43134.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
Length = 467
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M+DD N + D ++ +N +K+ ++++ + LLK + VL VL L
Sbjct: 348 FDAAMADDFNVP-LAVAVLYDMVRELNTAKEAGNSERINSLAQLLK---SLAAVLGVLQL 403
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ S QL +++ LI ER AKK++ F+++D+IR L +G+
Sbjct: 404 EADDFLQSGSADQLDAASIEA----------LIAERVQAKKDRQFARADEIRDSLKAQGV 453
Query: 196 ALMDVRKETIWR 207
L D R+ T WR
Sbjct: 454 ILEDSREGTTWR 465
>gi|418642067|ref|ZP_13204268.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|418651271|ref|ZP_13213279.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
gi|375017844|gb|EHS11447.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|375026177|gb|EHS19563.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
Length = 291
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 168 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 222
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 223 QIFSDVLGV------------PLKSK--NADELLDEDVEKLIEERNEARKNKDFARADEI 268
Query: 187 RADLTRKGIALMDV 200
R L + I L D
Sbjct: 269 RDMLKSQNIILEDT 282
>gi|416846020|ref|ZP_11906363.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
gi|323443098|gb|EGB00718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQSIILED 456
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 29/197 (14%)
Query: 41 TLQDCEVALSPF--------QEDARSGSITPAAE-------DCIKKLRDEFYTRMSDDLN 85
LQD E AL+ Q +G +P+A D + KL F+ M D N
Sbjct: 308 ALQDAEAALTRIYSALAATAQLPGAAGDPSPSASVVGEKDRDKLAKLEQSFHQAMDIDFN 367
Query: 86 TSHILTGAFLDALKFINNSKK----QPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGST 141
++ L G DA+K IN ++ P Q L L++ + ++ + V GL E
Sbjct: 368 SALAL-GRIFDAIKIINKVRQALPANPAPQDLQLLQ---QTAATIRDLTAVFGLAQEEPV 423
Query: 142 YSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVR 201
L++ + + L + + ++ L+E+R A+++KD++++D+IR L ++ I + D
Sbjct: 424 --SWLEKRQQRLLAQLSIKPAEIEALLEQREQARRDKDWAEADRIRDQLLQQRIVIKDGP 481
Query: 202 KETIWRPCVPVEQEQEA 218
T W V QEQ++
Sbjct: 482 DGTKWE----VLQEQQS 494
>gi|161508769|ref|YP_001574428.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|160367578|gb|ABX28549.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 476
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 353 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 407
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 408 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 453
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 454 RDMLKSQNIILED 466
>gi|333373148|ref|ZP_08465064.1| cysteine--tRNA ligase [Desmospora sp. 8437]
gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
Length = 462
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 11 PAFVRTLLLDIFWLNELFAS---IPQYTGNETITLQDCEVALSPFQED---ARSGSITPA 64
P +R LL + N + S I Q G +L+ + A++ A+ G P
Sbjct: 282 PRALRYFLLSAHYRNPISFSHEAIRQIEG----SLERFDTAVTNLHHRMGAAQEGEAEPE 337
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQ---PKQQQLSLIESLLK 121
+ + L EF M DDLNT++ ++ +A+KF N + + PK L++ + +
Sbjct: 338 VRERLASLTGEFEAAMDDDLNTANGIS-VLHEAVKFANETVARSVVPKGSLAMLLDWIHR 396
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
E+ LGL+ G S LA ++ LIEER A+ +DF
Sbjct: 397 FGGEI------LGLVTAGEEDS---------------LA-GEIEALIEERQQARAARDFK 434
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
++D IR L +GI L D + WR
Sbjct: 435 RADAIRDRLAAQGIILEDTPQGVRWR 460
>gi|257088530|ref|ZP_05582891.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|397698628|ref|YP_006536416.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D32]
gi|256997342|gb|EEU83862.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|397335267|gb|AFO42939.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D32]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|255974563|ref|ZP_05425149.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
gi|257087877|ref|ZP_05582238.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
gi|255967435|gb|EET98057.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256995907|gb|EEU83209.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|227555727|ref|ZP_03985774.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|422713143|ref|ZP_16769899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
gi|422717766|ref|ZP_16774440.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|227175132|gb|EEI56104.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|315573949|gb|EFU86140.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|315581900|gb|EFU94091.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|307284103|ref|ZP_07564273.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|422723275|ref|ZP_16779813.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
gi|424671639|ref|ZP_18108633.1| cysteine--tRNA ligase [Enterococcus faecalis 599]
gi|306503474|gb|EFM72723.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|315026628|gb|EFT38560.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
gi|402358254|gb|EJU92934.1| cysteine--tRNA ligase [Enterococcus faecalis 599]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|255971591|ref|ZP_05422177.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
gi|257421384|ref|ZP_05598374.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
gi|384517149|ref|YP_005704454.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
gi|255962609|gb|EET95085.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
gi|257163208|gb|EEU93168.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
gi|323479282|gb|ADX78721.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|253731134|ref|ZP_04865299.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253725099|gb|EES93828.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKIAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|227518065|ref|ZP_03948114.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|256964025|ref|ZP_05568196.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|257084048|ref|ZP_05578409.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|424679929|ref|ZP_18116743.1| cysteine--tRNA ligase [Enterococcus faecalis ERV116]
gi|424685122|ref|ZP_18121824.1| cysteine--tRNA ligase [Enterococcus faecalis ERV129]
gi|424687815|ref|ZP_18124441.1| cysteine--tRNA ligase [Enterococcus faecalis ERV25]
gi|424691339|ref|ZP_18127862.1| cysteine--tRNA ligase [Enterococcus faecalis ERV31]
gi|424692732|ref|ZP_18129211.1| cysteine--tRNA ligase [Enterococcus faecalis ERV37]
gi|424698917|ref|ZP_18135161.1| cysteine--tRNA ligase [Enterococcus faecalis ERV41]
gi|424700059|ref|ZP_18136265.1| cysteine--tRNA ligase [Enterococcus faecalis ERV62]
gi|424705101|ref|ZP_18141187.1| cysteine--tRNA ligase [Enterococcus faecalis ERV63]
gi|424706206|ref|ZP_18142213.1| cysteine--tRNA ligase [Enterococcus faecalis ERV65]
gi|424716047|ref|ZP_18145365.1| cysteine--tRNA ligase [Enterococcus faecalis ERV68]
gi|424719786|ref|ZP_18148920.1| cysteine--tRNA ligase [Enterococcus faecalis ERV72]
gi|424722895|ref|ZP_18151920.1| cysteine--tRNA ligase [Enterococcus faecalis ERV73]
gi|424727882|ref|ZP_18156509.1| cysteine--tRNA ligase [Enterococcus faecalis ERV81]
gi|424740150|ref|ZP_18168559.1| cysteine--tRNA ligase [Enterococcus faecalis ERV85]
gi|424754720|ref|ZP_18182629.1| cysteine--tRNA ligase [Enterococcus faecalis ERV93]
gi|227074501|gb|EEI12464.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|256954521|gb|EEU71153.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|256992078|gb|EEU79380.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|402355398|gb|EJU90173.1| cysteine--tRNA ligase [Enterococcus faecalis ERV116]
gi|402359448|gb|EJU94078.1| cysteine--tRNA ligase [Enterococcus faecalis ERV129]
gi|402362248|gb|EJU96784.1| cysteine--tRNA ligase [Enterococcus faecalis ERV31]
gi|402362949|gb|EJU97460.1| cysteine--tRNA ligase [Enterococcus faecalis ERV25]
gi|402369950|gb|EJV04196.1| cysteine--tRNA ligase [Enterococcus faecalis ERV41]
gi|402374913|gb|EJV08915.1| cysteine--tRNA ligase [Enterococcus faecalis ERV62]
gi|402376935|gb|EJV10847.1| cysteine--tRNA ligase [Enterococcus faecalis ERV37]
gi|402380263|gb|EJV14024.1| cysteine--tRNA ligase [Enterococcus faecalis ERV63]
gi|402388300|gb|EJV21746.1| cysteine--tRNA ligase [Enterococcus faecalis ERV65]
gi|402388973|gb|EJV22394.1| cysteine--tRNA ligase [Enterococcus faecalis ERV68]
gi|402395266|gb|EJV28376.1| cysteine--tRNA ligase [Enterococcus faecalis ERV72]
gi|402395462|gb|EJV28567.1| cysteine--tRNA ligase [Enterococcus faecalis ERV81]
gi|402400666|gb|EJV33482.1| cysteine--tRNA ligase [Enterococcus faecalis ERV73]
gi|402402522|gb|EJV35231.1| cysteine--tRNA ligase [Enterococcus faecalis ERV85]
gi|402402829|gb|EJV35526.1| cysteine--tRNA ligase [Enterococcus faecalis ERV93]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M+DD NTS T + IN + K + ++ + ++K + VL +
Sbjct: 363 FIQAMNDDFNTS-AATSVLFGLARDINKAIKSEE------VDKAWQWAQQLKALAQVLNI 415
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERATAKKNKDFSKSDQIRADLTRK 193
L + V Q L+ A +A+ D + LI ERA AK NKDF+++D++R L
Sbjct: 416 LQQ-----PVSQFLQAVAGDQADDGLTDAVIDGLIIERAEAKANKDFTRADEVREQLKAA 470
Query: 194 GIALMDVRKETIWR 207
GI L D R T WR
Sbjct: 471 GIELEDSRAGTTWR 484
>gi|386728287|ref|YP_006194670.1| hypothetical protein ST398NM01_0605 [Staphylococcus aureus subsp.
aureus 71193]
gi|418980360|ref|ZP_13528143.1| hypothetical protein ST398NM02_0605 [Staphylococcus aureus subsp.
aureus DR10]
gi|379991888|gb|EIA13350.1| hypothetical protein ST398NM02_0605 [Staphylococcus aureus subsp.
aureus DR10]
gi|384229580|gb|AFH68827.1| hypothetical protein ST398NM01_0605 [Staphylococcus aureus subsp.
aureus 71193]
Length = 476
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 353 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 407
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+KNKDF+++D+I
Sbjct: 408 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEI 453
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 454 RDMLKSQNIILED 466
>gi|325567615|ref|ZP_08144282.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
gi|325159048|gb|EGC71194.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
+++ + F M DD N ++ +T + + K++N + + P+ L L K
Sbjct: 350 VLEEFEERFIKEMDDDFNAANGITVVY-ELAKWLNLASEDPETDLALLTAGLAKFSE--- 405
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
L + G+ EL + ++ LI ER A+K KDF++SDQIR
Sbjct: 406 -WLTIFGIY-----------------FVSEELLDEEIEQLINERIAARKAKDFARSDQIR 447
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L +GI L D + T WR
Sbjct: 448 DELKEQGIILEDTPQGTRWR 467
>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
Length = 447
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDC-IKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
+ D EV L + ++ S +T + ++ D F M DD NT++ +T F D K+
Sbjct: 311 IHDAEVNLK-YLKNTHSLPLTGQVDQAELQTYLDAFQEAMDDDFNTANGVTVLF-DMAKW 368
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN+ +++ + VL V G++ + E+
Sbjct: 369 INSGHYDQ------------TVKDAFEKVLQVFGIVF------------------KEEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ D+ LIEER A+ NKDF+ +D+IR +L +GI L+D + W
Sbjct: 399 DEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKDGVRW 444
>gi|256960771|ref|ZP_05564942.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256951267|gb|EEU67899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|29374703|ref|NP_813855.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
gi|61216301|sp|Q839V5.1|SYC_ENTFA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|29342161|gb|AAO79927.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|424678692|ref|ZP_18115530.1| cysteine--tRNA ligase [Enterococcus faecalis ERV103]
gi|402350995|gb|EJU85889.1| cysteine--tRNA ligase [Enterococcus faecalis ERV103]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
++ RD F M DD+NT+ ++ F + +F N + + L E L + NE+
Sbjct: 345 ALENHRDRFIEAMDDDINTADAISIIF-ELARFSNTNVTE--NSSLEWAEKNLSLFNELT 401
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
VL+++ S +E +++L I++R AKKNKDF+ +D IR
Sbjct: 402 GVLNIIKAEDTDSNDNEQIEKL------------------IKDRVEAKKNKDFALADAIR 443
Query: 188 ADLTRKGIALMDVRKETIWRPC 209
+L GI + D R+ T W+
Sbjct: 444 DELKSMGIEIEDTRQGTKWKKV 465
>gi|88705054|ref|ZP_01102766.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
gi|88700749|gb|EAQ97856.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
Length = 462
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 76 FYTRMSDDLNTSHILTGAFLDAL-KFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
FY+ + DDLNT L + L AL + IN + + K Q L LL N +LG
Sbjct: 342 FYSALCDDLNTP--LAISELHALARDINKAAEDDKPQ---LKARLLAAGN-------LLG 389
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
+L E LQ D A + L + V LI ERA AK +K+++++D IR +LT G
Sbjct: 390 VLQHDPL--EWLQ--GDSASTDSSLDADAVDALIAERAAAKADKNYARADGIREELTAAG 445
Query: 195 IALMDVRKETIWR 207
I L D T+WR
Sbjct: 446 IVLEDSAGGTLWR 458
>gi|421514002|ref|ZP_15960723.1| Cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29212]
gi|401672898|gb|EJS79335.1| Cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29212]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|409385012|ref|ZP_11237740.1| Cysteinyl-tRNA synthetase [Lactococcus raffinolactis 4877]
gi|399207482|emb|CCK18655.1| Cysteinyl-tRNA synthetase [Lactococcus raffinolactis 4877]
Length = 457
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 30/138 (21%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I R +F M +D N S+ LT F + +K+IN + + SL E +L I
Sbjct: 347 IDGFRQDFIKEMDNDFNISNGLT-VFYELIKYIN--QGNFSMEARSLFEEILSI------ 397
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+G+ Q + + + AE+ + LI ER A++N+DF+ SD+IR
Sbjct: 398 ----IGI------------QFEPEEMLDAEIEQ-----LIAERQIARENRDFALSDKIRD 436
Query: 189 DLTRKGIALMDVRKETIW 206
DL +GIAL+D W
Sbjct: 437 DLKAQGIALLDTPDGVRW 454
>gi|293382260|ref|ZP_06628200.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
gi|293386691|ref|ZP_06631264.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
gi|312908762|ref|ZP_07767701.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|312979222|ref|ZP_07790926.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|291080374|gb|EFE17738.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
gi|291083860|gb|EFE20823.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
gi|310625200|gb|EFQ08483.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|311287987|gb|EFQ66543.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|257899915|ref|ZP_05679568.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
gi|257837827|gb|EEV62901.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QP+ L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPEVSATVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|229547086|ref|ZP_04435811.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|312952479|ref|ZP_07771347.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|422691842|ref|ZP_16749871.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|422707473|ref|ZP_16765166.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|422726587|ref|ZP_16783034.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
gi|229307815|gb|EEN73802.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|310629575|gb|EFQ12858.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|315153507|gb|EFT97523.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|315155078|gb|EFT99094.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|315158521|gb|EFU02538.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|430361550|ref|ZP_19426710.1| cysteinyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|430372121|ref|ZP_19429650.1| cysteinyl-tRNA synthetase [Enterococcus faecalis M7]
gi|429512418|gb|ELA02025.1| cysteinyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|429514836|gb|ELA04370.1| cysteinyl-tRNA synthetase [Enterococcus faecalis M7]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|424757614|ref|ZP_18185350.1| cysteine--tRNA ligase [Enterococcus faecalis R508]
gi|402406430|gb|EJV38981.1| cysteine--tRNA ligase [Enterococcus faecalis R508]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|307276290|ref|ZP_07557417.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|422693542|ref|ZP_16751553.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
gi|422734955|ref|ZP_16791235.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
gi|306507033|gb|EFM76176.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|315149012|gb|EFT93028.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
gi|315168265|gb|EFU12282.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
L + F M DD NT + F + K +N + K+ +Q ++ + L+ + +
Sbjct: 346 LVERFNAAMRDDFNTPEAIAVLF-EINKELNRTVKEENAEQAAIYYATLR------HLTN 398
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+LGL+ + E L+ D + L+ + LI++R AKK K+F+++D+IR L
Sbjct: 399 ILGLVQQ--NVDEFLK--SDIGQEALGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLL 454
Query: 192 RKGIALMDVRKETIWR 207
+G+ L D R+ T+WR
Sbjct: 455 DQGVVLEDTRQGTVWR 470
>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|218511865|sp|Q83BL7.2|SYC_COXBU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 460
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D FY M DD NT I + ++ IN + + IE + E+K + ++
Sbjct: 340 DRFYEAMDDDFNTP-IAFALLFEMVREINRFRDNNQ------IEKAAVLAAELKCLGNIF 392
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GLL YS +Q A K A++ E + LI++R A+ KD+ +DQIR LT
Sbjct: 393 GLL----QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDL 444
Query: 194 GIALMDVRKETIWR 207
G+A+ D T WR
Sbjct: 445 GVAIEDSSDGTSWR 458
>gi|312903154|ref|ZP_07762335.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|422688323|ref|ZP_16746479.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
gi|422730609|ref|ZP_16786998.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|310633545|gb|EFQ16828.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|315163378|gb|EFU07395.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|315578631|gb|EFU90822.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
Length = 478
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|420261773|ref|ZP_14764417.1| cysteine--tRNA ligase [Enterococcus sp. C1]
gi|394771707|gb|EJF51468.1| cysteine--tRNA ligase [Enterococcus sp. C1]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
+++ + F M DD N ++ +T + + K++N + + P+ L L K
Sbjct: 350 VLEEFEERFIKEMDDDFNAANGITVVY-ELAKWLNLASEDPETDLALLTAGLAKFSE--- 405
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
L + G+ EL + ++ LI ER A+K KDF++SDQIR
Sbjct: 406 -WLTIFGIY-----------------FVSEELLDEEIEQLINERIAARKAKDFARSDQIR 447
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L +GI L D + T WR
Sbjct: 448 DELKEQGIILEDTPQGTRWR 467
>gi|384512008|ref|YP_005707101.1| cysteine--tRNA ligase [Enterococcus faecalis OG1RF]
gi|327533897|gb|AEA92731.1| cysteine--tRNA ligase [Enterococcus faecalis OG1RF]
Length = 478
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|293572688|ref|ZP_06683656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
gi|430842652|ref|ZP_19460564.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1007]
gi|431083383|ref|ZP_19495954.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1604]
gi|431116625|ref|ZP_19497891.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1613]
gi|431600970|ref|ZP_19522455.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1861]
gi|431739229|ref|ZP_19528167.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1972]
gi|431742308|ref|ZP_19531202.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2039]
gi|291607274|gb|EFF36628.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
gi|430492876|gb|ELA69217.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1007]
gi|430565204|gb|ELB04373.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1604]
gi|430568405|gb|ELB07452.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1613]
gi|430590127|gb|ELB28212.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1861]
gi|430596206|gb|ELB34049.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1972]
gi|430600310|gb|ELB37963.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2039]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QP+ L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPEVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|418326367|ref|ZP_12937553.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|420164365|ref|ZP_14671095.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|420169345|ref|ZP_14675946.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|365225778|gb|EHM67016.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|394231375|gb|EJD77005.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|394231754|gb|EJD77377.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
Length = 466
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 53 QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN--------- 103
+E G P A ++ L ++ M DDLNT+ + G ++ N
Sbjct: 331 KEKWSKGQGFPEASQELQDLASKWDQAMQDDLNTAEAV-GYVFGLVRLANRMLEDKTFRK 389
Query: 104 --SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
+ K+ QQ L ++E D LG+ E L+QLK R ++
Sbjct: 390 SEAGKEIIQQMLGMLEGWG----------DALGVFQRSG--EEFLEQLKLMRCNRLDIDP 437
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
V ++ +R A+K+KDF +D IR +LT KGI +MD + W
Sbjct: 438 QTVQEMVLKRQQARKDKDFETADNIREELTAKGIEVMDTPEGPRW 482
>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|187629808|sp|A9N924.1|SYC_COXBR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
Length = 458
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D FY M DD NT I + ++ IN + + IE + E+K + ++
Sbjct: 338 DRFYEAMDDDFNTP-IAFALLFEMVREINRFRDNNQ------IEKAAVLAAELKCLGNIF 390
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GLL YS +Q A K A++ E + LI++R A+ KD+ +DQIR LT
Sbjct: 391 GLL----QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDL 442
Query: 194 GIALMDVRKETIWR 207
G+A+ D T WR
Sbjct: 443 GVAIEDSSDGTSWR 456
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A+++ + + F T M DD NT L F D + +N +K + Q+ L L L ++
Sbjct: 347 ASKEEVAAYSERFTTAMDDDFNTPEALAVLF-DLAREVNRAKGESPQKALLLALELKRLA 405
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAE-----LAENDVLHLIEERATAKKNK 178
+ VLGLL QQ D LK A+ L+E ++ I +R AK +K
Sbjct: 406 S-------VLGLL----------QQSPDTFLKGAQQHGVALSETEIEAKIAQRKEAKASK 448
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIW 206
DF+++D IR +L GI L D R+ T W
Sbjct: 449 DFAQADAIRDELAALGIILKDSREGTTW 476
>gi|422728227|ref|ZP_16784645.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0012]
gi|315151334|gb|EFT95350.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0012]
Length = 478
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|283795457|ref|ZP_06344610.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
gi|291077118|gb|EFE14482.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
gi|295091141|emb|CBK77248.1| cysteinyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
Length = 469
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT+ ++ F + +K N++ + + L +++ ++ + +VLG+
Sbjct: 358 FEAAMDDDFNTADAISAIF-EMVKLSNSTISEESSRAY-----LEELKGSIERLCEVLGI 411
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ E K+AE+ ++++ +IEER A+K K+F+ +D+IR L GI
Sbjct: 412 ITE----------------KKAEVLDDEIEAMIEERQQARKAKNFALADEIRGKLLDMGI 455
Query: 196 ALMDVRKETIWR 207
L D R+ W+
Sbjct: 456 VLEDTREGVKWK 467
>gi|422700223|ref|ZP_16758077.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
gi|315171290|gb|EFU15307.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
Length = 478
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|425055090|ref|ZP_18458581.1| cysteine--tRNA ligase [Enterococcus faecium 505]
gi|403034587|gb|EJY46024.1| cysteine--tRNA ligase [Enterococcus faecium 505]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N QP+ L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQPEVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|288930998|ref|YP_003435058.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288893246|gb|ADC64783.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 467
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL-SLIESLLKIEN 124
E +K +EF + +D+NT A+ ++N + + + +E+L K
Sbjct: 343 EGSVKSYMNEFVNALENDMNTP--------KAIAVMHNFAAEINKNLFEASLEALEKAFE 394
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
E+K + V G+ +K + L E DV LI+ER A+K +DF K+D
Sbjct: 395 ELKTMGYVFGIF--------------EKYTRVPVLGEEDV-RLIKERELARKERDFDKAD 439
Query: 185 QIRADLTRKGIALMDVRKETIW 206
+IR KGI L+D +K T W
Sbjct: 440 KIREKFREKGIYLVDTKKGTRW 461
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M+DD N+S ++ F A SK Q +E+ ++ +K + L
Sbjct: 364 DFIKAMNDDFNSSTAISVLFGLARDINKASKAQD-------VETAWQLAQHLKALAQTLN 416
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
+L + + LQ + + + + L + + LI ERA AK NK+F+++D+IR L G
Sbjct: 417 ILQQ--PVQQFLQAVIGEVAEDS-LTDEAIDGLIIERADAKTNKNFARADEIRVQLKEAG 473
Query: 195 IALMDVRKETIWR 207
I L D R T WR
Sbjct: 474 IELEDSRAGTTWR 486
>gi|254514497|ref|ZP_05126558.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
gi|219676740|gb|EED33105.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
Length = 462
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDE-FYTRMSDDLNTS------HILTGAF 94
L+ E L+ F RS + DC L E FY + DDLNT H+L
Sbjct: 309 LEQAEQTLTSFYNTLRS--VQGIELDCEVSLEGEGFYAALCDDLNTPLAISELHVLA--- 363
Query: 95 LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ IN + K +L LL N +LG+L + E LQ D A
Sbjct: 364 ----RDINKASGSDKP---ALKARLLAAGN-------LLGILQQDPL--EWLQ--GDGAS 405
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L V LI ER AK N+D++++D+IR +LT GI L D T+WR
Sbjct: 406 DLQGLDAEAVEALIAERVAAKANRDYARADEIRDELTAGGIILEDSAGGTLWR 458
>gi|256618484|ref|ZP_05475330.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256598011|gb|EEU17187.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQAAVSEPILV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|449103906|ref|ZP_21740649.1| cysteinyl-tRNA synthetase [Treponema denticola AL-2]
gi|448964359|gb|EMB45031.1| cysteinyl-tRNA synthetase [Treponema denticola AL-2]
Length = 492
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L+++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPRKDVLTVLAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDKG--SIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
gi|187629807|sp|A9KBJ2.1|SYC_COXBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
Length = 458
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D FY M DD NT I + ++ IN + + IE + E+K + ++
Sbjct: 338 DRFYEAMDDDFNTP-IAFALLFEMVREINRFRDNNQ------IEKAAVLAAELKCLGNIF 390
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GLL YS +Q A K A++ E + LI++R A+ KD+ +DQIR LT
Sbjct: 391 GLL----QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDL 442
Query: 194 GIALMDVRKETIWR 207
G+A+ D T WR
Sbjct: 443 GVAIEDSSDGTSWR 456
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+ K + L+++++ IE R AK +KDF+K+DQIR+DL +GI L D + T WR
Sbjct: 422 LQAKVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIELEDGKNGTTWR 480
>gi|256956971|ref|ZP_05561142.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|257078648|ref|ZP_05573009.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|294780003|ref|ZP_06745382.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|256947467|gb|EEU64099.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256986678|gb|EEU73980.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|294452897|gb|EFG21320.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPILV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|257417468|ref|ZP_05594462.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|300862011|ref|ZP_07108091.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|428765727|ref|YP_007151838.1| cysteinyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
gi|257159296|gb|EEU89256.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|295112378|emb|CBL31015.1| cysteinyl-tRNA synthetase [Enterococcus sp. 7L76]
gi|300848536|gb|EFK76293.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|427183900|emb|CCO71124.1| cysteinyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPILV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 76 FYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
F M DDLNT+ + F + + K K ++ + E L +I + V +VL
Sbjct: 354 FTAAMDDDLNTAQAMGHVFGLVRLAGRLMEDKTLAKSRETA--EVLGRILADFGVWAEVL 411
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+ G+ + L LK L R + V L+ ER A+K KDF++SD IR +L
Sbjct: 412 GVF--GTDATAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRDELASL 469
Query: 194 GIALMDVRKETIW 206
G+ +MD W
Sbjct: 470 GVTVMDTPTGPQW 482
>gi|392988349|ref|YP_006486942.1| cysteinyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
gi|392335769|gb|AFM70051.1| cysteinyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EL + ++ LIEER A+KN+DF++SD+IR L KGI L D + T WR
Sbjct: 418 ELLDEEIEQLIEERTQARKNRDFARSDEIRDQLKEKGILLDDTPQGTRWR 467
>gi|224372980|ref|YP_002607352.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
gi|223589717|gb|ACM93453.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
Length = 464
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 21/131 (16%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSK----KQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
MSDDLN S L A +D +F+ + K PK + L KI + ++ + ++LG+
Sbjct: 348 MSDDLNISKAL--AVVD--EFVKEANEALDKNPKDKVLKQ-----KILSNIEFINELLGI 398
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
GS E Q D+ K A++ E LIE+R AKK KDF +D+IR +LT GI
Sbjct: 399 --GGSDAYEYFQAGIDEETK-AKINE-----LIEKRTQAKKEKDFETADKIRDELTSMGI 450
Query: 196 ALMDVRKETIW 206
+ D T+W
Sbjct: 451 QIQDTPNGTVW 461
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 62 TPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLK 121
P E + R F+ M DD NT L + + +N ++ + +LL+
Sbjct: 329 APVPEADPQGFRARFHAAMDDDFNTPEALA-VLFELAREVNRLRQGDDDAGAAAPGALLR 387
Query: 122 IENEVKVVLDVLGLL---PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
V+ VLGLL PE + L+ E AE D L + R A+KN+
Sbjct: 388 ------VLGGVLGLLQDDPE--------RFLRGGDAGGDEDAEIDAL--VARRTEARKNR 431
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
DF+++D+IR +L +GI L D + T WR
Sbjct: 432 DFAEADRIRDELAERGIILEDGPQGTTWR 460
>gi|418614167|ref|ZP_13177151.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU118]
gi|418631396|ref|ZP_13193860.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU128]
gi|420178483|ref|ZP_14684814.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|420179582|ref|ZP_14685870.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
gi|420193490|ref|ZP_14699342.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|420200934|ref|ZP_14706572.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
gi|374821448|gb|EHR85509.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU118]
gi|374835497|gb|EHR99107.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU128]
gi|394246418|gb|EJD91676.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|394253571|gb|EJD98576.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
gi|394259932|gb|EJE04760.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|394267415|gb|EJE12008.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
Length = 466
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|374595540|ref|ZP_09668544.1| cysteinyl-tRNA synthetase [Gillisia limnaea DSM 15749]
gi|373870179|gb|EHQ02177.1| cysteinyl-tRNA synthetase [Gillisia limnaea DSM 15749]
Length = 494
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 77 YTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL 136
Y M+DD N S +L +A+KFIN+ K+ + S +E LLK + + +VLGLL
Sbjct: 376 YDAMNDDFN-SPVLIATLFEAVKFINSVKEGEGKITHSDLE-LLKSSMQ-SFIFEVLGLL 432
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
+V ++ + K + E LI+ RA A+ NKDF+ SDQIR L GI
Sbjct: 433 -------DVAVANENSSAKLSGTVE----LLIKLRAEARNNKDFATSDQIRDQLLELGIQ 481
Query: 197 LMDVRKETIW 206
L D ++ T +
Sbjct: 482 LKDGKEGTTF 491
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 62 TPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLK 121
P E + R F+ M DD NT L + + +N ++ + +LL+
Sbjct: 352 APVPEADPQGFRARFHAAMDDDFNTPEALA-VLFELAREVNRLRQGDDDAGAAAPGALLR 410
Query: 122 IENEVKVVLDVLGLL---PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
V+ VLGLL PE + L+ E AE D L + R A+KN+
Sbjct: 411 ------VLGGVLGLLQDDPE--------RFLRGGDAGGDEDAEIDAL--VARRTEARKNR 454
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
DF+++D+IR +L +GI L D + T WR
Sbjct: 455 DFAEADRIRDELAERGIILEDGPQGTTWR 483
>gi|254526663|ref|ZP_05138715.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221538087|gb|EEE40540.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 489
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDA--LKFINNSKKQPKQQQLSLIESLLKIEN--E 125
KKL+ F + +DLNT+ + + A LK N ++ + ++ L E IEN
Sbjct: 360 KKLK--FSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKIDLNEKFFLIENFKT 417
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+K + VLGL EVL +K +++ E ++L LI ER AKK K+++K+D+
Sbjct: 418 LKKLTKVLGL------EKEVL-------VKESKITEEEILSLINERLKAKKGKNYAKADE 464
Query: 186 IRADLTRKGIALMDVRKE-TIW 206
IR L KGI L+D KE T W
Sbjct: 465 IRNLLNEKGIELIDQSKEITTW 486
>gi|323490593|ref|ZP_08095798.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323395685|gb|EGA88526.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 467
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I++++ F M DD NT++ ++ F L ++N+ KQ S++E+ + + +E+
Sbjct: 347 IEEIKTAFIETMDDDFNTANAISSLF--DLSRLSNTYLLEKQTATSVLETFIAVFDELAG 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L LP ++ EL + +V L+ ER A+KN+DF+++D+IR
Sbjct: 405 ILG----LPFN---------------QQEELLDEEVEALMAERIEARKNRDFARADEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
K I L D + T W+
Sbjct: 446 LFKEKNIILEDTAQGTRWK 464
>gi|27467210|ref|NP_763847.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57866107|ref|YP_187766.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242241861|ref|ZP_04796306.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|418604261|ref|ZP_13167619.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|418606482|ref|ZP_13169759.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|418609538|ref|ZP_13172680.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|418624666|ref|ZP_13187336.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|420166785|ref|ZP_14673465.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|420172253|ref|ZP_14678763.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|420175665|ref|ZP_14682099.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
gi|420182221|ref|ZP_14688359.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|420196765|ref|ZP_14702504.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|420213016|ref|ZP_14718357.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
gi|420218748|ref|ZP_14723802.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|420226418|ref|ZP_14731202.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|420231105|ref|ZP_14735760.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH051668]
gi|30316150|sp|Q8CTU1.1|SYC_STAES RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216111|sp|Q5HRM3.1|SYC_STAEQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|27314752|gb|AAO03889.1|AE016744_292 cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57636765|gb|AAW53553.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242234639|gb|EES36951.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|374405278|gb|EHQ76220.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|374406865|gb|EHQ77740.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|374407889|gb|EHQ78734.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|374826863|gb|EHR90739.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|394232705|gb|EJD78318.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|394242843|gb|EJD88221.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
gi|394242893|gb|EJD88270.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|394250205|gb|EJD95399.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|394267267|gb|EJE11868.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|394277264|gb|EJE21590.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
gi|394291822|gb|EJE35607.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|394298794|gb|EJE42356.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|394303180|gb|EJE46608.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH051668]
Length = 466
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|375006897|ref|YP_004980527.1| cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236395|ref|YP_007400453.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
gi|359285743|gb|AEV17427.1| Cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205237|gb|AGE20702.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
Length = 466
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +R F M DD NT++ + A L L N Q K +I + L+ E +
Sbjct: 348 IADIRASFIREMDDDFNTANGI--AVLFELAKQANLYLQEKTTSEKVIHAFLR---EFEQ 402
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ DVLGL LK+ EL + ++ LI++R A+KN+DF+ +D+IR
Sbjct: 403 LADVLGL-----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
+L K I L D + T W+
Sbjct: 446 ELRAKNIILEDTPQGTRWK 464
>gi|417911475|ref|ZP_12555180.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|418611895|ref|ZP_13174958.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU117]
gi|418626331|ref|ZP_13188944.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU126]
gi|420188156|ref|ZP_14694170.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|420195780|ref|ZP_14701567.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|420202999|ref|ZP_14708585.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
gi|420207050|ref|ZP_14712553.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
gi|341653052|gb|EGS76825.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|374821410|gb|EHR85473.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU117]
gi|374832888|gb|EHR96591.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU126]
gi|394255416|gb|EJE00367.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|394262901|gb|EJE07653.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|394268872|gb|EJE13423.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
gi|394276370|gb|EJE20711.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
Length = 466
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|389576399|ref|ZP_10166427.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
gi|389311884|gb|EIM56817.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
Length = 496
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 44 DCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN 103
D + + PF+ A S + D ++ R +F M DDLNT+ A + ++F N
Sbjct: 353 DAKGEVIPFEVTADSVTGVLVKPDDMRAFRYDFEQAMDDDLNTADA-EAAIFNLVRFANI 411
Query: 104 SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAEND 163
++ + + ++ E+ + +LGL+ + +K++ L AE+ E
Sbjct: 412 EVQENSSKAFAE-----AVKTEIMELCGILGLIVD----------VKEEDLD-AEIEE-- 453
Query: 164 VLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
LI +R A+K KDF+ +D IR +L KGIAL D R+ W
Sbjct: 454 ---LIAKRQAARKAKDFAMADAIRDELLAKGIALKDTREGVKW 493
>gi|416127889|ref|ZP_11597154.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
gi|319399722|gb|EFV87971.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
Length = 466
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|293367905|ref|ZP_06614543.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417658256|ref|ZP_12307892.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|417910357|ref|ZP_12554079.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|420222648|ref|ZP_14727565.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|420225505|ref|ZP_14730335.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH06004]
gi|420228737|ref|ZP_14733454.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH04003]
gi|291317934|gb|EFE58342.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329738050|gb|EGG74271.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|341650532|gb|EGS74352.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|394288910|gb|EJE32808.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|394293572|gb|EJE37286.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH06004]
gi|394300200|gb|EJE43716.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH04003]
Length = 466
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|229550658|ref|ZP_04439383.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|229304224|gb|EEN70220.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
Length = 478
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQAAVSEPILV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|406658981|ref|ZP_11067121.1| cysteine--tRNA ligase [Streptococcus iniae 9117]
gi|405579196|gb|EKB53310.1| cysteine--tRNA ligase [Streptococcus iniae 9117]
Length = 447
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q ++S N + VV D L G+ E
Sbjct: 318 LKYLKNTSSQPLLDLNNAQEVQGFIDQFTDAMDSDFNAANGITVVYDFAKWLNSGNYSKE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
+ +D E+ ++D+ +LI ER A+ N+DF+++D IR L +GI L+D
Sbjct: 378 AKKAFEDMLAVFGIYFEEEVLDHDIENLIAERQVARANRDFARADAIRDQLAAQGIKLLD 437
Query: 200 VRKETIW 206
++ W
Sbjct: 438 TKEGVRW 444
>gi|429725275|ref|ZP_19260121.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 473 str. F0040]
gi|429150410|gb|EKX93321.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 473 str. F0040]
Length = 441
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 61 ITPAAE-----------DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKK 106
ITP AE + + LR Y M DDLN S I+ +A + IN + K
Sbjct: 295 ITPVAEGETPKGEVVTAEWVADLRQRCYDAMDDDLN-SPIVISYLFEACRTINSLADGKM 353
Query: 107 QPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH 166
+ L+ + + D+LGL E E ++ A A +
Sbjct: 354 AIAAETLAALREVFHT-----FCFDILGLTAE-----EGGNAAREAAFSSA------IDL 397
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+E RA AK NKD++ SDQIR L G A+ D + W+
Sbjct: 398 LLEVRAKAKANKDWATSDQIRDQLAALGFAVKDTKDGATWK 438
>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +R F M DD NT++ + A L L N Q K +I + L+ E +
Sbjct: 348 IADIRASFIREMDDDFNTANGI--AVLFELAKQANLYLQEKTTSEKVIHAFLR---EFEQ 402
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ DVLGL LK+ EL + ++ LI++R A+KN+DF+ +D+IR
Sbjct: 403 LADVLGL-----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
+L K I L D + T W+
Sbjct: 446 ELRAKNIILEDTPQGTRWK 464
>gi|443476781|ref|ZP_21066669.1| cysteinyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
gi|443018198|gb|ELS32490.1| cysteinyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
Length = 478
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 80 MSDDLNTSHILTGAFLDA--LKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
M DD NTS ++ F A L+ NS + S E+L + + + ++LG +
Sbjct: 359 MEDDFNTSVAISYVFELAKKLRAERNSLSHTGETAASS-EALFRDWQALSYMTNILGFIA 417
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
++ D+A+K L+E ++ LI++R AKK K++ + D+IR L KGI L
Sbjct: 418 ----------KIGDRAVKPEGLSETEITSLIQQRIEAKKTKNYQEGDRIRDYLKDKGITL 467
Query: 198 MDVRKET 204
+D + T
Sbjct: 468 IDRKDGT 474
>gi|392947832|ref|ZP_10313456.1| Cysteinyl-tRNA synthetase [Lactobacillus pentosus KCA1]
gi|392436929|gb|EIW14829.1| Cysteinyl-tRNA synthetase [Lactobacillus pentosus KCA1]
Length = 471
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 24/156 (15%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF-LDALKFINNSKKQPKQQQ 112
+DA +G+ A +K L D F T M DD N + + + L L + +K +
Sbjct: 336 KDATTGT-DEAVSAQLKTLTDNFVTAMDDDFNVQNGVAAVYELAKLANVYAAKTTVQSGT 394
Query: 113 LS-LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEER 171
L+ L E+L+ + V L A A LA++ + LI+ER
Sbjct: 395 LTALSEALVALAGVFGVTL---------------------AAPANASLADDAIQALIDER 433
Query: 172 ATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A++ KDF+K+DQIR DL +GI L D + +R
Sbjct: 434 EAARQAKDFAKADQIRDDLKAQGIILEDTPQGVRFR 469
>gi|418617597|ref|ZP_13180488.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU120]
gi|420213829|ref|ZP_14719111.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|420218203|ref|ZP_14723301.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05001]
gi|374818024|gb|EHR82196.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU120]
gi|394284227|gb|EJE28381.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|394284683|gb|EJE28785.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIH05001]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSK--ETDELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|61216117|sp|Q5L429.1|SYC_GEOKA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +R F M DD NT++ + A L L N Q K +I + L+ E +
Sbjct: 348 IADIRASFIREMDDDFNTANGI--AVLFELAKQANLYLQEKTTSEKVIHAFLR---EFEQ 402
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ DVLGL LK+ EL + ++ LI++R A+KN+DF+ +D+IR
Sbjct: 403 LADVLGL-----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
+L K I L D + T W+
Sbjct: 446 ELRAKNIILEDTPQGTRWK 464
>gi|414085694|ref|YP_006994408.1| cysteinyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
gi|412999284|emb|CCO13093.1| cysteinyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
Length = 469
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 63 PAAEDCIKKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
P +D ++L + F T M DD N ++ +T + K +N +Q + + ++IE++
Sbjct: 341 PTDQDYFQQLAEFKQTFITEMDDDFNAANGIT-VIYELAKVMNIYSEQAEVSK-AVIEAM 398
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
L + K +L V G+ E +AEL + ++ L+ ER TA+ K+
Sbjct: 399 LGL---FKELLQVFGINLE----------------NQAELLDENIEQLLSERTTARAEKN 439
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
F++SD+IR L +GI + D + T WR
Sbjct: 440 FARSDEIRDLLKAEGIIIDDTPQGTRWR 467
>gi|423480234|ref|ZP_17456924.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401149239|gb|EJQ56714.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 465
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +I + +K ++
Sbjct: 347 MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIGAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAQEELLDEEIETLIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|358066738|ref|ZP_09153228.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
gi|356695009|gb|EHI56660.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
Length = 469
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D + KL+++F M DD NT+ ++ F + ++ N++ + + E + + +
Sbjct: 349 DRLLKLKNKFEVFMDDDFNTADAISTVF-EIVRLANSTADENSSK-----EYINALHEAI 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA-ENDVLHLIEERATAKKNKDFSKSDQ 185
+ +VLG++ KR +L+ + +V LIE+R A+KNKD+ ++D+
Sbjct: 403 DTLCNVLGIIT-----------------KRKQLSIDEEVEALIEKRQEARKNKDYKQADE 445
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L GI L D R+ W+
Sbjct: 446 IRNRLLSMGIVLEDTREGVKWK 467
>gi|414161193|ref|ZP_11417454.1| cysteinyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876455|gb|EKS24361.1| cysteinyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I L +F T M DD NT++ +T + D K N + + +IE ++ ++
Sbjct: 345 IDALLKQFETVMDDDFNTANAIT-TWYDLAKLANKYVMENTTSK-KVIERFKEV---FQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ +G + E+L + D+ LIEER A+KNKD++++D+IR
Sbjct: 400 FSDVLGVPLKGKQHDELLDE--------------DIEALIEERNQARKNKDYARADEIRD 445
Query: 189 DLTRKGIALMDV 200
+L + I L D
Sbjct: 446 ELKAQNIILEDT 457
>gi|419770321|ref|ZP_14296401.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
gi|419772804|ref|ZP_14298830.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|420171647|ref|ZP_14678185.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
gi|420208684|ref|ZP_14714142.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
gi|383357267|gb|EID34742.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
gi|383358897|gb|EID36339.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|394237109|gb|EJD82604.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
gi|394281385|gb|EJE25634.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSK--ETDELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|312901251|ref|ZP_07760534.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
gi|311291628|gb|EFQ70184.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
Length = 478
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPILV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|419597297|ref|ZP_14132277.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23341]
gi|419599398|ref|ZP_14134258.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23342]
gi|380573892|gb|EIA96017.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23341]
gi|380574943|gb|EIA97032.1| cysteinyl-tRNA synthetase [Campylobacter coli LMG 23342]
Length = 460
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG----- 134
+S+DLN S L A LD +FI N+ + QQ + E KI+ + + + G
Sbjct: 344 LSNDLNISKAL--ALLD--EFITNANLELDQQSKN-KELKQKIKEALSELAKIFGFGFMD 398
Query: 135 --LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
L + E+ ++++D+ L+R E AKKNKDF+K+DQIR DL +
Sbjct: 399 ENLYFQWGVAKELKEKIQDQILQRNE---------------AKKNKDFAKADQIREDLLK 443
Query: 193 KGIALMDVRKETIW 206
GIAL D + TIW
Sbjct: 444 LGIALQDTPQGTIW 457
>gi|336435108|ref|ZP_08614826.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336002001|gb|EGN32128.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 468
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINN--SKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
F M DD NT+ + F D +K N S + K +++ ++K+ DVL
Sbjct: 357 FENAMEDDFNTADAVAAIF-DLVKHANTTASAESSKAYLQGVLDLIVKLS-------DVL 408
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G++ E ++ +L + D+ LI ER A+K ++F+++D+IR +L K
Sbjct: 409 GIITE----------------RKEDLLDADIEALIAERQAARKERNFARADEIRDELLAK 452
Query: 194 GIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 453 GIILEDTREGVKWK 466
>gi|422741657|ref|ZP_16795680.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
gi|315143639|gb|EFT87655.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
Length = 478
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPILV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|307268962|ref|ZP_07550326.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|307287137|ref|ZP_07567208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|422702777|ref|ZP_16760606.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
gi|422709041|ref|ZP_16766555.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|422719153|ref|ZP_16775801.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
gi|422868290|ref|ZP_16914837.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
gi|306501735|gb|EFM71026.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|306514770|gb|EFM83321.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|315033512|gb|EFT45444.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
gi|315036335|gb|EFT48267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|315165683|gb|EFU09700.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
gi|329576209|gb|EGG57727.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
Length = 478
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPILV----AMDKLFSG 413
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 414 WLAIFGLF-----------------FKNEELVDAQVDALIEERNQARKDRDFARSDEIRD 456
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 457 LLKEQGIVLEDTPQGTRWR 475
>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
Length = 440
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
+KK + F M DD NT++ +T + N++ + ++ S ++E+ +K +
Sbjct: 322 MKKFQVAFEAAMDDDFNTANAVT----ELYNLANHANQYLLEEHTSKAVLEAYVK---QF 374
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 375 ETLFGILGL-----------------ELTKEELLDEEIEVLIQKRIEARKNRDFALSDQI 417
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 418 RDDLKERNIILEDTAQGTRWK 438
>gi|357638237|ref|ZP_09136110.1| cysteine--tRNA ligase [Streptococcus urinalis 2285-97]
gi|418417936|ref|ZP_12991128.1| cysteinyl-tRNA synthetase [Streptococcus urinalis FB127-CNA-2]
gi|357586691|gb|EHJ56099.1| cysteine--tRNA ligase [Streptococcus urinalis 2285-97]
gi|410869466|gb|EKS17427.1| cysteinyl-tRNA synthetase [Streptococcus urinalis FB127-CNA-2]
Length = 447
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 31/165 (18%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D EV + + + + + ++ + +F M DD N ++ +T F + K+I
Sbjct: 311 IHDAEVNVKYLKNTYQQPLVASHDDMELESFKSQFIEAMDDDFNAANGITLIF-EFAKWI 369
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N+ + I++E + +L V G++ E E+ +
Sbjct: 370 NSGHYNQE------------IKDEFEKMLSVFGIVFE------------------TEVLD 399
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+D+ LI ER A+K KDF+K+D IR L ++GI L+D + W
Sbjct: 400 SDIEALIAERQEARKQKDFAKADAIRDQLVKEGIKLLDTKDGVRW 444
>gi|429757818|ref|ZP_19290348.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429174409|gb|EKY15886.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 487
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
+TPA +L + F M DDLN + L A + LK N + + Q + + L
Sbjct: 348 LTPA------ELPEAFTNAMDDDLNVAGALA-AVHEQLKLGNIALAEGDTQAIKRQQIL- 399
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAEN------DVL--HLIEERA 172
V+ +LDVLGL P ++ + E AE+ DVL L+E+RA
Sbjct: 400 -----VRSMLDVLGLDPASPQWANAGAGVS----ASGEAAEDPQKHALDVLVGALLEQRA 450
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+ +KD+S +DQIR L G+ + D + W
Sbjct: 451 QARADKDWSTADQIRDRLAEAGVQVADGKDGATW 484
>gi|408793883|ref|ZP_11205488.1| cysteine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
5]
gi|408461118|gb|EKJ84848.1| cysteine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
5]
Length = 485
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 19/142 (13%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQ--QQLSLIESLLKIENEV 126
I+KL EF ++DDLN L F + ++ +N+ + L L ESLL
Sbjct: 357 IQKLNLEFLNSLADDLNVPKALASVF-ELVRIVNHFLDSNTELFDSLFLKESLLLFYK-- 413
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
V D+ + ++ + +Q L ++E+ +L IE R AK+NKDFS +D+I
Sbjct: 414 --VNDLFAVF----SFEKQVQSLDG-------ISEDWILEQIEARKAAKQNKDFSTADKI 460
Query: 187 RADLTRKGIALMDVRK-ETIWR 207
R +L KGI L D ++ T W+
Sbjct: 461 RKELEEKGILLADTKEGNTTWK 482
>gi|345021352|ref|ZP_08784965.1| cysteinyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 27/142 (19%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENE 125
I LR +F T M DD NT++ ++ F +A ++N P+ +IE+ +N
Sbjct: 347 ISALRKKFETEMDDDFNTANAISVLFDLTKEANVYLNEKHTSPE-----VIEAF---QNL 398
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+K L++LG+ EG+ L + ++ LIEER A+K ++F+++D+
Sbjct: 399 LKSFLEILGIKLEGN----------------VSLLDEEIETLIEERNEARKTRNFARADE 442
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L K I L D + W+
Sbjct: 443 IRDLLKEKNIILEDTPQGVRWK 464
>gi|73663535|ref|YP_302316.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418577086|ref|ZP_13141216.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|109894949|sp|Q49V39.1|SYC_STAS1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|72496050|dbj|BAE19371.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324448|gb|EHY91596.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M+DD NT++ +T A+ D K N + + + + L + + ++
Sbjct: 345 IDKILEQFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTKVLGRFKEVYQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ +G E+L + +V LIEER A+K+KDF+++D+IR
Sbjct: 400 FSDVLGVPLKGKDSDELLDE--------------EVEALIEERNNARKDKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 QLKEQNIILED 456
>gi|420186448|ref|ZP_14692516.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM040]
gi|394252164|gb|EJD97205.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM040]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSK--ETDELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|251809946|ref|ZP_04824419.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875020|ref|ZP_06283895.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|417657342|ref|ZP_12307007.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|417914035|ref|ZP_12557690.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|418664646|ref|ZP_13226113.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|421607883|ref|ZP_16049117.1| cysteinyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
gi|251806489|gb|EES59146.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296348|gb|EFA88867.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|329734647|gb|EGG70954.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|341653866|gb|EGS77631.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|374410302|gb|EHQ81061.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|406656497|gb|EKC82902.1| cysteinyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSK--ETDELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|257081388|ref|ZP_05575749.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|256989418|gb|EEU76720.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
Length = 470
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + L+ ++
Sbjct: 351 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQATVSEPVLV----AMDKLFSG 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + GL K EL + V LIEER A+K++DF++SD+IR
Sbjct: 406 WLAIFGLF-----------------FKNEELLDAQVDALIEERNQARKDRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 449 LLKEQGIVLEDTPQGTRWR 467
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
+ +I P + +F M DD NT + F + +K +N K QQ L+
Sbjct: 326 AATIQPGLVAVGTEFEAKFNDAMDDDFNTPQAMAVLF-ELVKEVN------KTQQPELVG 378
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
L + N LGLL E + K + + L++ + LI ER A+ +
Sbjct: 379 LLQSLANR-------LGLLTETPEFF-----FKSQVGQPDGLSDEAIEALIVERTQARAD 426
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K++++SD+IR DL KG+ L+D ++ T WR
Sbjct: 427 KNWARSDEIRDDLLAKGVELLDSKEGTSWR 456
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 16/148 (10%)
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
S PA D K F M+DD NT + F D ++ +N + K + +S +
Sbjct: 329 SAVPAGGDEFKA---RFIEAMNDDFNTPEAYSVLF-DMVREVN----RLKSEDMSAANGM 380
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
+++ + VLGLL + EV + + AE+A+ + LI++R A+KNKD
Sbjct: 381 AA---QLRELASVLGLLEQDP---EVFLKGGAQTEDDAEVAK--IEALIQQRLDARKNKD 432
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
++++D R +LT GI L D + TIWR
Sbjct: 433 WAQADAARDELTAMGIVLEDSAQGTIWR 460
>gi|418412970|ref|ZP_12986217.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
gi|410879563|gb|EKS27404.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
Length = 466
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F T M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGI------------PLKSK--ETDELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|406990269|gb|EKE09947.1| hypothetical protein ACD_16C00099G0005 [uncultured bacterium]
Length = 453
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 37 NETITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
NE Q C +L F R ++ C + + DDLNT + A D
Sbjct: 306 NENTVFQ-CRQSLDRFYTALRGRDLSEKQPAC-----ETVKVALEDDLNTP-LAISALHD 358
Query: 97 ALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK- 155
+ +N ++ + ++ +L+ S L+ E LGLL QQ ++ K
Sbjct: 359 LVTRLNKARNEKEKNKLA---STLQASGEW------LGLL----------QQNPERWFKG 399
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ + EN ++ LIE R A+K K+F ++D IR +L + G+ L D + T+WR
Sbjct: 400 KTGIDENKIMELIEARTQARKEKNFLEADSIRDELLKTGVLLEDTPEGTLWR 451
>gi|449118836|ref|ZP_21755237.1| cysteinyl-tRNA synthetase [Treponema denticola H1-T]
gi|449121225|ref|ZP_21757577.1| cysteinyl-tRNA synthetase [Treponema denticola MYR-T]
gi|448951451|gb|EMB32264.1| cysteinyl-tRNA synthetase [Treponema denticola MYR-T]
gi|448951864|gb|EMB32673.1| cysteinyl-tRNA synthetase [Treponema denticola H1-T]
Length = 492
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L+++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPQKDVLTVLAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDKG--SIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|418274313|ref|ZP_12889811.1| cysteine-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|376009879|gb|EHS83205.1| cysteine-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 470
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA +G+ T AE ++ L F T M DD N + + A + K N + Q+
Sbjct: 336 QDATNGTDTAVAEQ-LQTLITNFGTAMDDDFNVQNGV-AAVYELAKLANVYAAKATVQK- 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L+ ++ + + V G+ E + A LA++ + LI+ER
Sbjct: 393 ---ETLIALQEALVQLTGVFGVTFETAN---------------ATLADDAIQALIDEREA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+K K+F+K+DQIR DL +GI L D + +R
Sbjct: 435 ARKAKNFAKADQIRDDLKAQGIILEDTPQGVRFR 468
>gi|456982827|gb|EMG19305.1| DALR domain protein [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 110
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 26/132 (19%)
Query: 80 MSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL 136
M+DDLN S L F +++K IN ++ + +Q++ I+ L + +LG+L
Sbjct: 1 MADDLNISKALAVVF-ESVKQINSLLDTNQSDSKQRIEYIQILAYFDR-------ILGVL 52
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
S + +L ++++ LIEER A+KNKDF++SD IR L +GI
Sbjct: 53 NFES---------------KKDLLDSEIDSLIEERQIARKNKDFARSDAIRDQLLAQGIL 97
Query: 197 LMDVRKETIWRP 208
+ D ++ WR
Sbjct: 98 IEDTKEGIRWRK 109
>gi|317495866|ref|ZP_07954229.1| cysteinyl-tRNA synthetase [Gemella morbillorum M424]
gi|316914043|gb|EFV35526.1| cysteinyl-tRNA synthetase [Gemella morbillorum M424]
Length = 465
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 37/196 (18%)
Query: 27 LFASIPQYTGNETITLQDCEVALSPFQE---DARSGSITPAAEDCIKKLRDE-------- 75
LF Y TL++ E+A + F++ ++ E ++KL DE
Sbjct: 290 LFMLTVHYRTPINYTLENIELAKTNFEKLKTSYQNLEFRLNNEMTVEKLDDEVVALASSE 349
Query: 76 ---FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDV 132
F M DD NT++ L+ ++ + ++ N+ Q + + +L LLK D
Sbjct: 350 LEKFEEYMQDDFNTANALS-SWYEVVRITNSYTAQNEVNKETL--ELLK------AAFD- 399
Query: 133 LGLLPEGSTYSEVLQ-QLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
TYS +L +KD L ++ + LIEER A+KN+DF+ +D+IR DL
Sbjct: 400 --------TYSSILGINVKDDN----SLEDSHIEKLIEERENARKNRDFALADKIRDDLK 447
Query: 192 RKGIALMDVRKETIWR 207
+GI L D ++ W+
Sbjct: 448 EQGIILEDTKQGVRWK 463
>gi|42525611|ref|NP_970709.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|422340871|ref|ZP_16421812.1| cysteinyl-tRNA synthetase [Treponema denticola F0402]
gi|449105992|ref|ZP_21742684.1| cysteinyl-tRNA synthetase [Treponema denticola ASLM]
gi|449110664|ref|ZP_21747264.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 33521]
gi|449114525|ref|ZP_21751002.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35404]
gi|449117088|ref|ZP_21753532.1| cysteinyl-tRNA synthetase [Treponema denticola H-22]
gi|451967731|ref|ZP_21920960.1| cysteinyl-tRNA synthetase [Treponema denticola US-Trep]
gi|61216253|sp|Q73RJ6.1|SYC_TREDE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|41815622|gb|AAS10590.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|325475275|gb|EGC78460.1| cysteinyl-tRNA synthetase [Treponema denticola F0402]
gi|448952352|gb|EMB33156.1| cysteinyl-tRNA synthetase [Treponema denticola H-22]
gi|448956150|gb|EMB36912.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35404]
gi|448960038|gb|EMB40755.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 33521]
gi|448966560|gb|EMB47215.1| cysteinyl-tRNA synthetase [Treponema denticola ASLM]
gi|451703517|gb|EMD57883.1| cysteinyl-tRNA synthetase [Treponema denticola US-Trep]
Length = 492
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L+++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPQKDVLTVLAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDKG--SIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|81429293|ref|YP_396294.1| cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
gi|109894906|sp|Q38UZ6.1|SYC_LACSS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78610936|emb|CAI55988.1| Cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
Length = 468
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D +L F T M DD N + LT + + K N +QP Q ++L + +
Sbjct: 348 DKAAELEAAFVTAMDDDFNVQNGLTQLY-ELAKLSNQYLEQPTVQS----DTLTSLATRL 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+L + G++ K +L + +V LIEER A+ KDF+KSD I
Sbjct: 403 TRLLAIFGVV-----------------FKADQLLDTEVESLIEERQAARAAKDFAKSDAI 445
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L +GI L D + WR
Sbjct: 446 RDQLKAQGIILEDTPQGMRWR 466
>gi|358062853|ref|ZP_09149489.1| cysteinyl-tRNA synthetase [Clostridium hathewayi WAL-18680]
gi|356698942|gb|EHI60466.1| cysteinyl-tRNA synthetase [Clostridium hathewayi WAL-18680]
Length = 469
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 49 LSPFQEDARSGSITPAAEDCI---KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK 105
L + A G +T A + K L +++ M DD NT+ + F L ++NS
Sbjct: 328 LRDLEAKAADGGMTEAENGNVAEAKALVEKYEAAMDDDFNTADAIAAVF--ELVKLSNST 385
Query: 106 KQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL 165
+ + + S +K ++ + DVLG++ E K+ E+ +++V
Sbjct: 386 ADAESTKAYV--SYMK--ETIEKLCDVLGIITE----------------KKEEVLDSEVE 425
Query: 166 HLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LIE R A+K+K+F+ +D+IR L GI L D R+ W+
Sbjct: 426 ALIEARQQARKDKNFALADEIRGKLLDMGIVLEDTREGVKWK 467
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 73 RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDV 132
R+ F M DD NT L F A + ++QP + ++ E+K + +
Sbjct: 343 RERFTQVMDDDFNTPEALAVMFELAREVNRAKQEQPDEAA--------RLGGELKQLGAI 394
Query: 133 LGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTR 192
LGLL + LK + L+E+++ I +R AK NKDF+++D IR +L+
Sbjct: 395 LGLLQQAPQIF-----LKGTQQQGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELSA 449
Query: 193 KGIALMDVRKETIW 206
GI L D R+ T W
Sbjct: 450 LGIILKDSREGTSW 463
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 32/145 (22%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKI 122
+ R++F +M DD NT+ ++ F D K IN S K ++ +SL+ L K
Sbjct: 343 ALDSYREKFIEKMDDDFNTADGISVIF-DLAKDINININGKSSKAAVEKAISLMRELGK- 400
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
P G +LQ+++ L E+++ +LIE+R A+KNKD++
Sbjct: 401 --------------PLG-----ILQKVEKHNL------EDEIQNLIEQRQNARKNKDWAL 435
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
+D+IR DL +GI L D + W+
Sbjct: 436 ADKIRDDLKERGIVLEDTPEGIRWK 460
>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 420
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
+KK + F M DD NT++ +T + N++ + ++ S ++E+ +K +
Sbjct: 302 MKKFQVAFEAAMDDDFNTANAVTELY----NLANHANQYLLEEHTSKAVLEAYVK---QF 354
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 355 ETLFGILGL-----------------ELTKEELLDEEIEVLIQKRIEARKNRDFALSDQI 397
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 398 RDDLKERNIILEDTAQGTRWK 418
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
R +F M DD NT+ + G +A+ +N K ++ + + + K ++ V+
Sbjct: 351 FRADFTAAMDDDFNTAAAI-GVIFEAVTEVNKYLKGNEKLDPAAVAAAEKFFGDIDSVMG 409
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
++G + Q+ K+++ A E LI ER A+K +DF +SD IR +L
Sbjct: 410 IIG----------IEQEKKEESGDEAARIEP----LIAERNAARKARDFKRSDAIRDELA 455
Query: 192 RKGIALMDVRKETIWR 207
+GI L D + T W+
Sbjct: 456 AQGIILEDTPQGTKWK 471
>gi|407364085|ref|ZP_11110617.1| cysteinyl-tRNA ligase [Pseudomonas mandelii JR-1]
Length = 460
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARS-GSITPAAEDCI 69
P VR LL+ + + S Y+ + L+D + AL F + S+ PA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVAPAGGEA- 336
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
+ F M+DD T + ++ IN + ++ L+ L E+ V
Sbjct: 337 --FVERFTQVMNDDFGTPEACA-VLFEMVREIN----RLRESDLNAAAGLAARLKELASV 389
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L VL L E L+ A R + AE D L I+ R TA+ NKD+++SD+IR
Sbjct: 390 LGVLQL--------EADDFLQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQ 439
Query: 190 LTRKGIALMDVRKETIWR 207
LT G+ L D + T WR
Sbjct: 440 LTAMGVVLEDGKGGTTWR 457
>gi|403238385|ref|ZP_10916971.1| cysteinyl-tRNA ligase [Bacillus sp. 10403023]
Length = 465
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I R++F M DD NT++ ++ F L N Q K +IE+ L+ E +V
Sbjct: 347 ITAFRNDFIEAMDDDFNTANAISVLF--ELSKQANYYLQEKNTSEKVIEAFLQ---EFEV 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ LGL +L+D+ L E+ + LI +R A+KN+DF+ SDQIR
Sbjct: 402 LFSTLGL------------RLEDEQLLDEEIED-----LIAKRNQARKNRDFALSDQIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D + T W+
Sbjct: 445 QLKAMNIILEDTPQGTRWK 463
>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
Length = 466
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I+ + +F M DD NT++ +T A+ D K N + + + + L + +
Sbjct: 343 DQIETILRQFEAVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLHRFKEVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ +G +E+L + D+ LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKGENENELLDE--------------DIEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMDV 200
R L + I L D
Sbjct: 444 RDMLKERNIILEDT 457
>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|417907416|ref|ZP_12551189.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|341596309|gb|EGS38925.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
Length = 466
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I+ + +F M DD NT++ +T A+ D K N + + + + L + +
Sbjct: 343 DQIETILRQFEAVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLHRFKEVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ +G +E+L + D+ LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKGKNENELLDE--------------DIEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMDV 200
R L + I L D
Sbjct: 444 RDMLKERNIILEDT 457
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I+ L+ +F M DDLNT+ TG + ++ IN ++ L+ ++ LK
Sbjct: 344 AIEDLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANSCSKETLTFVKDTLK------ 396
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ +LG+L + E + Q ++L L+E+R A+K K+F+++D+IR
Sbjct: 397 ELCSILGILEQYGAKEEAIPQ--------------EILELVEKRNQARKAKNFAEADRIR 442
Query: 188 ADLTRKGIALMDVRKET 204
+L G ++D + T
Sbjct: 443 DELKSLGYIVLDTPQGT 459
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|187629791|sp|A7GK01.1|SYC_BACCN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
+K+ + F M DD NT++ +T + N++ + ++ S +IE+ + N++
Sbjct: 347 MKEFQSAFEAAMDDDFNTANAITELY----NLANHANQYLLEEHTSKVVIEAYI---NQL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+++ +LGL+ + EL + ++ LI++R A+KN+DF+ +D+I
Sbjct: 400 EMLFRILGLV-----------------FTKEELLDKEIEALIQKRIEARKNRDFALADKI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKERNIILEDTAQGTRWK 463
>gi|402835794|ref|ZP_10884351.1| cysteine--tRNA ligase [Mogibacterium sp. CM50]
gi|402273157|gb|EJU22365.1| cysteine--tRNA ligase [Mogibacterium sp. CM50]
Length = 467
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 32/134 (23%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFIN-----NSKKQPKQQQLSLIESLLKIENEV 126
+D+F MSDDLNT+ + GA + + IN + K+ ++ LS+I+ L
Sbjct: 350 YKDKFIECMSDDLNTAGAI-GAIFELVSAINVEIEGGASKEFAEKALSMIQELA------ 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
DVLG VLQ+ D + +D+ L++ER A+K KD++++D+I
Sbjct: 403 ----DVLG----------VLQRSHDDTIG------DDIRRLVDERQQARKEKDWARADEI 442
Query: 187 RADLTRKGIALMDV 200
R L+ G L D
Sbjct: 443 RDQLSSMGYILKDT 456
>gi|379795001|ref|YP_005324999.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356871991|emb|CCE58330.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 466
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I + + F T M+DD NT++ +T A+ D K N + + + E + K + ++
Sbjct: 345 IDTILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVYQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K EL + DV LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 MLKEQNIILED 456
>gi|389816095|ref|ZP_10207282.1| cysteinyl-tRNA ligase [Planococcus antarcticus DSM 14505]
gi|388465359|gb|EIM07677.1| cysteinyl-tRNA ligase [Planococcus antarcticus DSM 14505]
Length = 467
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I+ ++ F M DD NT++ ++ F L ++N+ KQ S++E+ + + +E+
Sbjct: 347 IETIKAAFIKTMDDDFNTANAISNLF--DLSRLSNTYLLEKQTATSVLETFIAVFDELAG 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VL G +S+ + EL + +V L+ ER A+KN+DF+++D+IR
Sbjct: 405 VL--------GMPFSQ-----------KDELLDEEVEALMTERIEARKNRDFARADEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
K I L D + W+
Sbjct: 446 LFKEKNIILEDTAQGMRWK 464
>gi|418962953|ref|ZP_13514801.1| cysteine--tRNA ligase [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383344722|gb|EID22877.1| cysteine--tRNA ligase [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 447
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 22/129 (17%)
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIE-------------NEVKVVLDVLGLLPEG----- 139
LK++ N+ +QP ++L E + ++ N + VV ++ + G
Sbjct: 318 LKYLKNTYEQPFTGTVNLTELQVFLDKFTAAMDEDFNAANGITVVFELAKWINSGHYNQE 377
Query: 140 --STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
S ++E+LQ + AE+ + D+ LIE+R A+ KDF+ +D+IR +L KGI L
Sbjct: 378 VKSAFAELLQVFG--IVFTAEVLDADIEALIEQRQAARVAKDFATADKIRDELAAKGIKL 435
Query: 198 MDVRKETIW 206
+D + W
Sbjct: 436 LDTKDGVRW 444
>gi|116328522|ref|YP_798242.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331250|ref|YP_800968.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281004|sp|Q04SB0.1|SYC_LEPBJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122283690|sp|Q050D6.1|SYC_LEPBL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116121266|gb|ABJ79309.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124939|gb|ABJ76210.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 474
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+ + EF ++DDLN S L F ++LK IN + K+ +++ I + NE +L
Sbjct: 353 RWKKEFEESLADDLNVSKALAVVF-ESLKTIN-AFLDSKKNRVAEISA-----NEFIQIL 405
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
+ Y + L ++ ++ L ++++ LI+ER TA+KNKDF++SD IR L
Sbjct: 406 ---------AYYDRIFGVLNFES-QKDPLIDSEIDSLIQERQTARKNKDFARSDAIRDQL 455
Query: 191 TRKGIALMDVRKETIWR 207
+GI + D + WR
Sbjct: 456 LAQGILIEDTKDGIRWR 472
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I++L+ +F M DDLNT+ TG + ++ IN ++ L+ + +LK
Sbjct: 344 AIEELKAKFIDAMEDDLNTAEA-TGYLFEMVREINTHANSCSKETLTFAKDILK------ 396
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ +LG+L + S E + Q ++L L+E+R A+K K+F ++D+IR
Sbjct: 397 ELCSILGILEQYSAKEEAIPQ--------------EILELVEKRNQARKAKNFLEADRIR 442
Query: 188 ADLTRKGIALMDVRKET 204
+L G ++D + T
Sbjct: 443 DELKSLGYIVLDTPQGT 459
>gi|195978850|ref|YP_002124094.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|229558791|sp|B4U570.1|SYC_STREM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|195975555|gb|ACG63081.1| cysteinyl-tRNA synthetase CysS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 448
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D EV L + + ++ A + F M+DD NT++ +T F D K+I
Sbjct: 312 IHDAEVNLKYLKNTLQQPTVATADSSQLAAFVTAFKAAMNDDFNTANGITVLF-DMAKWI 370
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N+ +++ + +L V G++ E AE +
Sbjct: 371 NSGAYSE------------AVKSAFEEMLAVFGIVFE------------------AESLD 400
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
++ LI ER A+ N+DF+K+D IR L +GI L+D + W
Sbjct: 401 TEIEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKDGVRW 445
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 53 QEDAR-SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPK 109
ED R S SI P D +K F M DD N++ L F + L +N S K
Sbjct: 328 HEDTRTSDSIAPVLSDITRK----FEEAMDDDFNSALALASLFEGVHTLNKLNPSSADAK 383
Query: 110 QQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR---AELAENDVLH 166
+ ++ ++ DVLG + Q L + R ++L+ +++
Sbjct: 384 ----GIYDTYCRLG-------DVLG----------IFQSLPSQWFARQSTSQLSADEIAA 422
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
IE R A+++KDF+ +D+IR +L G+ + D ++ T WR
Sbjct: 423 RIEARNAARRDKDFATADRIRDELLENGVEIKDSKEGTSWR 463
>gi|449108147|ref|ZP_21744791.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 33520]
gi|448961997|gb|EMB42691.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 33520]
Length = 492
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPQKDVLTVFAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDKG--SIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|78186099|ref|YP_374142.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
gi|109894917|sp|Q3B6D2.1|SYC_PELLD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78166001|gb|ABB23099.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
Length = 483
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT + A D K +N + +P S +E+ ++ + V VLG+
Sbjct: 357 FREAMDDDFNTP-VAIAALFDFSKALNTALDRPDGLNASSLEAARELFSTAAVT--VLGI 413
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+ E + + D + AE + + L+E R+ A+KNKDF+ SD IR L GI
Sbjct: 414 MTE-----DAEGGMHDGG-RSAETLDEVMGVLMELRSEARKNKDFATSDLIRDHLLAAGI 467
Query: 196 ALMDVRKETIW 206
+ D R+ W
Sbjct: 468 EIKDTREGASW 478
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 10 FPAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCI 69
FPA V + F LN + S Y + L + AL+ R T A D
Sbjct: 284 FPAEV----IRYFILNSHYRSPLNYGDQQ---LDAAQQALTRLYTALRGLEDTGAPLDKN 336
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAF-----LDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+ F T M+DD NT+ + F ++ L+ N+S+ QQL L+ +L I
Sbjct: 337 SEFYQRFATAMNDDFNTAEAIAVLFDLSREVNRLRVDNSSQAVAVAQQLKLLGGILGI-- 394
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
L PE K + L+ + V LI ER A+K K++++SD
Sbjct: 395 --------LQADPEA--------WFKRENTSTNGLSNDAVEKLIAERQAARKAKNWAESD 438
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
+IR L +GI L D T WR
Sbjct: 439 RIRDMLKEQGIILEDAAGVTTWR 461
>gi|408500579|ref|YP_006864498.1| cysteinyl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
gi|408465403|gb|AFU70932.1| cysteinyl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
Length = 525
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS---LIESLLKIENEVKV 128
L ++F M+DD+N S L A L AL N+ L L +LL +V+
Sbjct: 393 LPEDFVQAMNDDINVSGGL--AALYALVRQANAAMDADPGALDRQWLANALL----QVRA 446
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+LDV GL P ++ ++A+ + V ++ER A+K+ DF+++D IR
Sbjct: 447 MLDVFGLDPLDPHWAGAAADRGNRAMSTLDAL---VRQQLQERNQARKDHDFARADAIRD 503
Query: 189 DLTRKGIALMDVRKETIW 206
LT G+A+ D + W
Sbjct: 504 QLTAAGVAVADTPAGSTW 521
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 42 LQDCEVALSPFQEDARSG------SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFL 95
L++ ALS + +S SI P A + + F M+DD NT ++
Sbjct: 320 LKESHTALSRIYQSLKSAENFGVISIMPNAWE--SEAGQAFAKAMNDDFNTPKAVS-VLF 376
Query: 96 DALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN + K + Q+ + S LK + VL++ P E LQ + K
Sbjct: 377 SVVTEINRAMKAGEYQKATQEASTLKT---LASVLNIAQSSPH-----EFLQ--ANIGNK 426
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L++ ++ + I +R AK K+F+K+D IR +L R+GI L D R T WR
Sbjct: 427 PDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTTWR 478
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 42 LQDCEVALSPFQEDARSG------SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFL 95
L++ ALS + +S SI P A + + F M+DD NT ++
Sbjct: 320 LKESHTALSRIYQSLKSAENFGVISIMPNAWE--SEAGQAFAKAMNDDFNTPKAVS-VLF 376
Query: 96 DALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN + K + Q+ + S LK + VL++ P E LQ + K
Sbjct: 377 SVVTEINRAMKAGEYQKATQEASTLKT---LASVLNIAQSSPH-----EFLQ--ANIGNK 426
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L++ ++ + I +R AK K+F+K+D IR +L R+GI L D R T WR
Sbjct: 427 PDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTTWR 478
>gi|29348760|ref|NP_812263.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|298387124|ref|ZP_06996678.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
gi|383124933|ref|ZP_09945593.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|61216345|sp|Q8A2F4.1|SYC_BACTN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|29340666|gb|AAO78457.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|251840916|gb|EES68997.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|298260274|gb|EFI03144.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
Length = 493
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPAA +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPAATTSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNINAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FCFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEVKDTKDGFEWR 490
>gi|422350108|ref|ZP_16430995.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657585|gb|EKB30471.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 468
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D +K +F M DD NT + F A + IN + +QL +
Sbjct: 348 DWSEKYAAQFKAAMDDDFNTPLAIAAMFELATE-INRTGDPVLVRQL----------KGL 396
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VL++L L PE LK A ++ E + LIEER AKK K+F+++D+I
Sbjct: 397 GAVLNILQLDPE--------NFLKGGA---SDADEARINALIEERREAKKAKNFARADEI 445
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L +GI LMD + T WR
Sbjct: 446 RKSLLDEGIVLMDGPQGTTWR 466
>gi|416840764|ref|ZP_11903951.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
gi|323439800|gb|EGA97517.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
Length = 466
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ LK K EL + DV LIEER A+K KDFS++D+I
Sbjct: 398 QIFSDVLGV------------PLKSKNAD--ELLDEDVEKLIEERNEARKKKDFSRADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|387142219|ref|YP_005730612.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TW20]
gi|269940102|emb|CBI48478.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TW20]
Length = 466
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ + E+L + +K LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKSKNADELLDEYVEK--------------LIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|145219092|ref|YP_001129801.1| cysteinyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
gi|145205256|gb|ABP36299.1| cysteinyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
Length = 483
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPK---QQQLSLIESLLKIENE 125
+ R+ F M DD NT + A D K +N + +P+ Q L L +
Sbjct: 350 VAPFRERFREAMDDDFNTP-VAIAALFDFAKALNAALDRPEGLDQPSLGAAADLFTMAG- 407
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+DVLG+L S + + A R L E + L+E R+ A+ KDF+ SD
Sbjct: 408 ----VDVLGILEHDSG------SIGNGAGDRQRL-EGAMKVLMELRSAARSEKDFATSDL 456
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GI + D R+ W
Sbjct: 457 IRDGLKAAGIEIKDTREGASW 477
>gi|392330610|ref|ZP_10275225.1| cysteinyl-tRNA synthetase [Streptococcus canis FSL Z3-227]
gi|391418289|gb|EIQ81101.1| cysteinyl-tRNA synthetase [Streptococcus canis FSL Z3-227]
Length = 447
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D EV L + + A E +K+ F M DD NT++ +T F D K+I
Sbjct: 311 IHDAEVNLKYLKNTLQQPLTEKADEQELKRFVAAFQVAMDDDFNTANGITVVF-DMAKWI 369
Query: 102 NN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N+ S +P +++ + +L V G++ E E+
Sbjct: 370 NSGSYTEP-------------VKSAFEKMLAVFGIIFE------------------EEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E D+ LI +R A+ N+DF+ +D IR L +GI L+D + W
Sbjct: 399 EADIETLIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRW 444
>gi|375335611|ref|ZP_09776955.1| cysteinyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
Length = 366
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 33 QYTGNETITLQDCEVALSPFQE------DARSGSITPAAEDCIKKLRDEFYTRMSDDLNT 86
QY G ++++ E + + Q D G + P D K+ ++ M DD NT
Sbjct: 202 QYRGQLNYSVENIEQSRAALQRLYTALRDLPEG-VAPTDTDYEKRFKEA----MDDDFNT 256
Query: 87 SHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP-EGSTYSEV 145
+ F + K IN ++ + +L L K+ VLGLL + S+Y +
Sbjct: 257 P-LTYSIFFEIAKEINLLRESDITKAANLGALLRKLAG-------VLGLLTHDASSYLQG 308
Query: 146 LQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETI 205
D +L + + LI+ER A+KNKD++++D+ R +LT GI L D + TI
Sbjct: 309 ASGADD------DLDVSKIEALIQERQEARKNKDWARADKARDELTAMGIVLEDGAQGTI 362
Query: 206 WR 207
WR
Sbjct: 363 WR 364
>gi|393198919|ref|YP_006460761.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 467
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +++ +F M+DD NT++ ++ F L I N +++++L +
Sbjct: 347 IGQIKVDFENAMNDDFNTANAVSALF--ELSHIANVYLNEANTDKEVLQAILTM---FDT 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ +VLG+ +K A L + ++ LIEER A+KN+DF++SD+IR
Sbjct: 402 IGNVLGI------------HIK----VEAGLLDEEIEALIEERNQARKNRDFARSDEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D R+ T W+
Sbjct: 446 QLLGMDIVLEDTRQGTRWK 464
>gi|449126849|ref|ZP_21763124.1| cysteinyl-tRNA synthetase [Treponema denticola SP33]
gi|448945052|gb|EMB25927.1| cysteinyl-tRNA synthetase [Treponema denticola SP33]
Length = 492
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ ++ + K P++ L+++ S
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----EMQLLIKEKDIPQKDVLTVLAS 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDK--DSIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|342733078|ref|YP_004771917.1| cysteinyl-tRNA synthetase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456446|ref|YP_005669044.1| cysteinyl-tRNA synthetase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417961012|ref|ZP_12603504.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-2]
gi|417965448|ref|ZP_12606973.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-4]
gi|418373337|ref|ZP_12965426.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330533|dbj|BAK57175.1| cysteinyl-tRNA synthetase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|346984792|dbj|BAK80468.1| cysteinyl-tRNA synthetase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380334538|gb|EIA24923.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-2]
gi|380337617|gb|EIA26646.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-4]
gi|380341173|gb|EIA29666.1| Cysteinyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 474
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 24/196 (12%)
Query: 11 PAFVRTLLLDIFWLNEL-FASIPQYTGNETIT-LQDCEVALSPFQEDARSGSITPAAEDC 68
P +R LL + + N + F+++ + +++ ++ V L + + S E
Sbjct: 285 PNVIRFFLLSVHYRNNISFSNLHMESAKKSLARIKKSYVNLINIKSCNNADSDNYLDE-- 342
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
IKK +F +M DD NTS ++ F + +K+IN + +L ++ES+ KI K+
Sbjct: 343 IKKYYAKFINKMEDDFNTSDAISVIF-EFIKYIN--RFANSFNRLEVMESI-KI---FKI 395
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
D+ GL + D + L E+D+ ++ +R K+ + F KSD IR+
Sbjct: 396 FFDIFGL------------EYDDNNVDCKNL-EDDIKDMVIQRLEFKQKRQFDKSDLIRS 442
Query: 189 DLTRKGIALMDVRKET 204
+L +KG L D++ T
Sbjct: 443 ELEKKGYILEDIKGGT 458
>gi|385816251|ref|YP_005852642.1| Cys-tRNA synthetase cycrs [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126288|gb|ADY85618.1| Cys-tRNA synthetase cycrs [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 474
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPNLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERA 172
ESL ++ L V GL +V DK L + E ++D + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLLAK-EAGDDDAVIEELVAQRT 437
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 438 EARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|239636927|ref|ZP_04677925.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
gi|239597475|gb|EEQ79974.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
Length = 466
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I ++ + F T M DD NT++ +T A+ D K N + + ++ + K + ++
Sbjct: 345 IDQILENFETVMDDDFNTANAVT-AWYDLAKLAN----RYVLENVTSTNVIAKFKEVYQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ +G+ ++L + +K LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGVPLKGNQQDDLLDEEIEK--------------LIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 HLKEQNIILED 456
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
L++ AL F + ++ G ++ A + + F+ M DD NT L F A +
Sbjct: 309 LKEARSALERFYQALQAAGDLSTAEGGVGSEYEERFFAAMDDDFNTPRALAVLFELASEL 368
Query: 101 INNSKKQ-PKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALK---- 155
++Q P + L+L E+K + ++GLL QQ D LK
Sbjct: 369 NKAVREQLPIAKPLAL---------ELKRLAGMIGLL----------QQDPDAFLKGEAA 409
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
EL + LI++R A+K+++F+++D+IR +L +GI L D R+ T W
Sbjct: 410 EGELDAEAIDSLIDKRNQARKDRNFAEADRIRDELLEQGIVLKDSREGTNW 460
>gi|384869115|ref|YP_005751829.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
T0131]
gi|424784383|ref|ZP_18211193.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus CN79]
gi|329313250|gb|AEB87663.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
T0131]
gi|421956982|gb|EKU09306.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus CN79]
Length = 466
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ + E+L + +K LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKSKNADELLDEYVEK--------------LIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|383480618|ref|YP_005389512.1| cysteinyl-tRNA synthetase protein CysS [Streptococcus pyogenes
MGAS15252]
gi|383494600|ref|YP_005412276.1| cysteinyl-tRNA synthetase protein CysS [Streptococcus pyogenes
MGAS1882]
gi|378928608|gb|AFC66814.1| cysteinyl-tRNA synthetase protein CysS [Streptococcus pyogenes
MGAS15252]
gi|378930327|gb|AFC68744.1| cysteinyl-tRNA synthetase protein CysS [Streptococcus pyogenes
MGAS1882]
Length = 447
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQP----------KQQQLSLIESL---LKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP KQ ++ +++ N + VV D+ + GS Y+E
Sbjct: 318 LKYLKNTLQQPLTETADEQELKQFVIAFQDAMDDDFNTANGITVVFDMAKWINSGS-YTE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ +K L E+ E D+ LI +R A+ N+DF+ +D IR L +GI L+
Sbjct: 377 LVRSAFEKMLAVFGIVFEEEVLEVDIEALIAKRQEARANRDFATADAIRNQLAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|423393457|ref|ZP_17370683.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|423421744|ref|ZP_17398833.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401096863|gb|EJQ04900.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401629564|gb|EJS47377.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 465
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +I + +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIGAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 400 ETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKDRNIILEDTAQGTRWK 463
>gi|335998615|ref|ZP_08564524.1| cysteinyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
gi|335348014|gb|EGM49523.1| cysteinyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
Length = 470
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 53 QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ 112
+ DA G + + L++ F M DD NT Q
Sbjct: 335 KNDAEKGDVETEIHEKFSALKNRFIEAMDDDFNT-----------------------QNG 371
Query: 113 LSLIESLLKIEN----EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+++I + K+ N + V L+ + L +G +S+ + K + EL + + LI
Sbjct: 372 IAVIYEMAKLLNVYSEKATVSLETIEYLLDG--FSKAAEVFGIKFEEETELLDEKIEALI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EER A+K ++F++SD+IR L KG+ L D + T W+
Sbjct: 430 EERIAARKARNFARSDEIRDMLKEKGVILEDTPQGTRWK 468
>gi|301308608|ref|ZP_07214561.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
gi|423337567|ref|ZP_17315311.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
gi|300833402|gb|EFK64019.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
gi|409236831|gb|EKN29635.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
Length = 491
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F DA
Sbjct: 333 ALQAAEKGLSRLMEAYGHLMKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DA 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 392 ARAINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASAGGNSYETFG----K 443
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 444 AVDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|221141034|ref|ZP_03565527.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|384861192|ref|YP_005743912.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|418279334|ref|ZP_12892697.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
gi|418871564|ref|ZP_13425940.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|418949178|ref|ZP_13501437.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|418954701|ref|ZP_13506657.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
gi|302750421|gb|ADL64598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|365170668|gb|EHM61629.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
gi|375368117|gb|EHS72044.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|375369622|gb|EHS73495.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|375372466|gb|EHS76206.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
Length = 466
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ + E+L + +K LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKSKNADELLDEYVEK--------------LIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|359784260|ref|ZP_09287433.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359298453|gb|EHK62668.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 464
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 93 AFLDALKF-INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKD 151
A LDAL+ +N ++ + QQL +E+L EN+ + D G + + +LQQL
Sbjct: 338 ALLDALRRDLNVAEALARLQQL--VEALKNAENDTQRA-DAKGRVLASAKLLGLLQQLPS 394
Query: 152 KALK-----RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KALK R+ L+ + LI ER A++ +DF+++D +R +L GI + D W
Sbjct: 395 KALKALSPERSGLSVARIDALIAEREDARQQRDFNRADSLRDELLELGIEIRDTPNGAHW 454
Query: 207 RP 208
+P
Sbjct: 455 QP 456
>gi|449124904|ref|ZP_21761221.1| cysteinyl-tRNA synthetase [Treponema denticola OTK]
gi|448940587|gb|EMB21492.1| cysteinyl-tRNA synthetase [Treponema denticola OTK]
Length = 492
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L+++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPQKDVLTVLAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNMLKDK--DSIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES----LLKIENEVKVVLDVLGL 135
M DD+NT+ GA I + + + + L E LL+I+ ++ +VLG+
Sbjct: 358 MEDDMNTA----GALGHVFSAIRLAGRVTEDKTLRKAEGGRDFLLRIKADMAAWSEVLGI 413
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
G + L +L+D RA + V L++ R A+++KDF+KSD IR +L +
Sbjct: 414 F--GRDPAGFLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAKSDAIRDELAAMHV 471
Query: 196 ALMDVRKETIW 206
+ D + W
Sbjct: 472 EVKDTPQGATW 482
>gi|420413896|ref|ZP_14913018.1| cysteine--tRNA ligase [Helicobacter pylori NQ4099]
gi|393027457|gb|EJB28546.1| cysteine--tRNA ligase [Helicobacter pylori NQ4099]
Length = 465
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + STY + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSTYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|255692897|ref|ZP_05416572.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
gi|423301120|ref|ZP_17279144.1| cysteinyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
gi|260621346|gb|EEX44217.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
gi|408472455|gb|EKJ90983.1| cysteinyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
Length = 493
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPAA +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPAATTSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|304381872|ref|ZP_07364519.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|304339658|gb|EFM05605.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
Length = 466
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + + F T M+DD NT++ +T A+ D K N + + + E + K +
Sbjct: 343 DQIDAILNRFETVMNDDFNTANAIT-AWYDLAKLAN----KYVLENTTSTEVIDKFKAVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ + E+L + +K LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLKSKNADELLDEYVEK--------------LIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKSQNIILED 456
>gi|150009429|ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
gi|187629835|sp|A6LFT6.1|SYC_PARD8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149937853|gb|ABR44550.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
Length = 491
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F DA
Sbjct: 333 ALQAAEKGLSRLMEAYGHLMKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DA 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 392 TRAINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASASGNHYEAFG----K 443
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 444 AVDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|339061917|ref|ZP_08649096.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC2047]
gi|330720057|gb|EGG98482.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC2047]
Length = 182
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 41 TLQDCEVALSPFQEDAR----SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLD 96
+L+ + AL F R S P E + R F T M+DD NT L F
Sbjct: 28 SLKQAQQALERFYNTLRNAQPSNEAVPVVESNTE-FRIRFETAMNDDFNTPEALAVLFDL 86
Query: 97 ALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
A + P Q +L +K + + LG+L + E Q D
Sbjct: 87 AREINRGGTSTPAQVEL------------LKELGETLGILQQ---EPEAFLQGGDTG--- 128
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E++ + LI +R A+ +KD++++D+IR L KG+ L D R+ T WR
Sbjct: 129 -EISAEQIEQLIIDRKNARSDKDWARADEIRDLLIEKGVVLDDGREGTTWR 178
>gi|255016291|ref|ZP_05288417.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_7]
gi|410105132|ref|ZP_11300041.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D25]
gi|409232674|gb|EKN25517.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D25]
Length = 491
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F DA
Sbjct: 333 ALQAAEKGLSRLMEAYGHLMKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DA 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 392 TRAINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASASGNHYEAFG----K 443
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 444 AVDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|341820679|emb|CCC56976.1| cysteinyl-tRNA synthetase [Weissella thailandensis fsh4-2]
Length = 471
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+L D+F M DD N + LT A+ + + Q ++ +++ I +++ ++
Sbjct: 354 ELVDQFNAAMDDDFNAPNALT-----AIYGLVDLANQYTSAEVVYQDTVNFILDKIATLM 408
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
V G+ +L EL ++D+ LI+ER A+ NK+F++SD+IR L
Sbjct: 409 SVFGV----------------DSLSEDELLDDDIETLIKERDDARANKNFARSDEIRDLL 452
Query: 191 TRKGIALMDVRKETIWR 207
+GI L D + T W
Sbjct: 453 AEQGIILEDTPQGTRWH 469
>gi|256842437|ref|ZP_05547940.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
gi|423334118|ref|ZP_17311899.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
gi|256736044|gb|EEU49375.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
gi|409225881|gb|EKN18795.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
Length = 491
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 42 LQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F DA
Sbjct: 334 LQAAEKGLSRLMEAYGHLMKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DAT 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 393 RAINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASASGSNYETFS----KA 444
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 445 VDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I++L+ +F M DDLNT+ TG + ++ IN ++ L+ + LK
Sbjct: 344 AIEELKAKFIDAMEDDLNTAEA-TGYLFEMVREINTYANSCSKETLTFAKDTLK------ 396
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ +LG+L + S E + Q +L L+E+R A+K K+F+++D+IR
Sbjct: 397 ELCSILGILEQYSAKEEAIPQ--------------QILELVEKRNQARKAKNFAEADRIR 442
Query: 188 ADLTRKGIALMDVRKET 204
+L G ++D + T
Sbjct: 443 DELKSLGYIVLDTPQGT 459
>gi|104774470|ref|YP_619450.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123077205|sp|Q1G8Z0.1|SYC_LACDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|103423551|emb|CAI98469.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 474
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPDLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERA 172
ESL ++ L V GL +V DK L + E ++D + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLLAK-EAGDDDAVIEELVAQRT 437
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 438 EARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
L F T M DD NT +AL + ++ + +L K NE + V
Sbjct: 341 LPHHFTTAMDDDFNTP--------EALAVLFDTSR-----------ALNKGLNEAQDVTA 381
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+ G S ++QQ + ++ + LIEER A+KN+DF+++D IR +L+
Sbjct: 382 LAGQFTAMSALLGIVQQDTAIWFQSGDVDAAAIEALIEERLQARKNRDFARADAIRNELS 441
Query: 192 RKGIALMDVRKETIWR 207
+GI L D T W+
Sbjct: 442 AQGIVLEDSASGTTWK 457
>gi|116514575|ref|YP_813481.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274693|sp|Q048S9.1|SYC_LACDB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116093890|gb|ABJ59043.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 474
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPDLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERA 172
ESL ++ L V GL +V DK L + E ++D + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLLAK-EAGDDDAVIEELVAQRT 437
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 438 EARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|418030448|ref|ZP_12668943.1| Cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|418036165|ref|ZP_12674598.1| Cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354687170|gb|EHE87274.1| Cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354688733|gb|EHE88762.1| Cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 474
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPDLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERA 172
ESL ++ L V GL +V DK L + E ++D + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLLAK-EAGDDDAVIEELVAQRT 437
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 438 EARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|406666950|ref|ZP_11074713.1| Cysteine--tRNA ligase [Bacillus isronensis B3W22]
gi|405385233|gb|EKB44669.1| Cysteine--tRNA ligase [Bacillus isronensis B3W22]
Length = 467
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I ++ +F M+DD NT++ ++ F L I N +++++L +
Sbjct: 347 IGHIKVDFENAMNDDFNTANAVSALF--ELSHIANVYLNEANTDKEVLQAILTM---FDT 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ +VLG+ +K A L + ++ LIEER A+KN+DF++SD+IR
Sbjct: 402 IGNVLGI------------HIK----VEAGLLDEEIEALIEERNQARKNRDFARSDEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D R+ T W+
Sbjct: 446 QLLGMDIVLEDTRQGTRWK 464
>gi|167044639|gb|ABZ09311.1| putative tRNA synthetases class I (C) catalytic domain protein
[uncultured marine crenarchaeote HF4000_APKG7F19]
Length = 463
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 21/142 (14%)
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
AE +K+ RDEF + +++DLNT LT AF ++ +N+ + K Q S
Sbjct: 334 AEKLVKECRDEFDSALNNDLNTPLALT-AFYKLIREVNSLAAEEKITQTSA--------- 383
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
E+ +LPE S +L + LK ++ +N++ +I++R + K++ ++D
Sbjct: 384 EI--------VLPEFERMSGILGI---QILKVSDAEKNEINQMIKKRDEYRMQKNYEQAD 432
Query: 185 QIRADLTRKGIALMDVRKETIW 206
IRA + K I D + +T W
Sbjct: 433 SIRAKIAEKNIIFFDHKNKTTW 454
>gi|403669826|ref|ZP_10935002.1| cysteinyl-tRNA ligase [Kurthia sp. JC8E]
Length = 466
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 27/138 (19%)
Query: 73 RDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
R+ F M DD NTS+ + F A K++N + SLIE+L ++ + + +V
Sbjct: 351 RENFIAAMDDDFNTSNAIAALFGLSTIANKYLNEENTNAATLR-SLIEALDELSSVLGLV 409
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L+V + EL + ++ LIEER A+K+++F +SD+IR
Sbjct: 410 LNV-----------------------KEELLDEEIDALIEERQQARKDRNFKRSDEIRDQ 446
Query: 190 LTRKGIALMDVRKETIWR 207
L I L D R+ W+
Sbjct: 447 LKDMNIILEDTRQGVRWK 464
>gi|386746357|ref|YP_006219574.1| cysteinyl-tRNA synthetase [Helicobacter pylori HUP-B14]
gi|384552606|gb|AFI07554.1| cysteinyl-tRNA synthetase [Helicobacter pylori HUP-B14]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + STY + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSTYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|300811849|ref|ZP_07092315.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497168|gb|EFK32224.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 474
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPDLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL--HLIEERA 172
ESL ++ L V GL +V DK L + E ++D + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLLAK-EAGDDDAVIEELVAQRT 437
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 438 EARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|449129911|ref|ZP_21766139.1| cysteinyl-tRNA synthetase [Treponema denticola SP37]
gi|448944546|gb|EMB25424.1| cysteinyl-tRNA synthetase [Treponema denticola SP37]
Length = 492
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 64 AAEDCIKKLR-----DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
+A+D IK + D F M DDL+T L+ L+ + K P++ L+++ +
Sbjct: 363 SAKDMIKNEKARSCFDNFIAAMEDDLSTPKALS-----ELQLLIKEKDIPQKDVLTVLAA 417
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ I LG+ E LKDK E+ E+++L LIEERA+AK +K
Sbjct: 418 MDSI----------LGI----KLIEESFNTLKDK--DSIEIDESEILKLIEERASAKLDK 461
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D+IR L GI L D +T W+
Sbjct: 462 NYKLADEIRDKLKGMGIILEDQAGKTTWK 490
>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
Length = 420
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +I + +K ++
Sbjct: 302 MEKFQVAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIGAYVK---QL 354
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + D+LGL L + EL + ++ LI++R A+KN+DF+ SDQI
Sbjct: 355 ETLFDILGL-----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQI 397
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 398 RDDLKDRNIILEDTAQGTRWK 418
>gi|387793460|ref|YP_006258525.1| cysteinyl-tRNA synthetase [Solitalea canadensis DSM 3403]
gi|379656293|gb|AFD09349.1| cysteinyl-tRNA synthetase [Solitalea canadensis DSM 3403]
Length = 486
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I L+ Y MSDD NT I + ++ IN+ K + +E+L ++ N+
Sbjct: 364 INALKTRCYNAMSDDFNTP-IAIAELFEGVRIINSVKAGSETITAEDLETLTQLFNDF-- 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ D+ GL E + V + L D+L I+ R AK NKD++ SD IR
Sbjct: 421 LFDIFGLQKEEHGSNNVGKVL-------------DLL--IDMRNNAKANKDYATSDTIRN 465
Query: 189 DLTRKGIALMDVRKETIW 206
L G L D + T W
Sbjct: 466 KLLEIGYQLKDSKDGTTW 483
>gi|471728|gb|AAA17656.1| cysteinyl-tRNA synthetase homolog, partial [Helicobacter pylori]
Length = 188
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 57 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 106
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 107 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 153
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 154 EQKDFLKADHIREELLKQKIALMDTPQGTIW 184
>gi|404399554|ref|ZP_10991138.1| cysteinyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 460
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK 70
P VR LL+ + + S Y+ + L+D + AL F + PAA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPNVPAAGG--E 335
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+ F M+DD T + ++ IN ++ IE+ + +K +
Sbjct: 336 AFVERFTQAMNDDFGTPEACA-VLFEMVREINRLREID-------IEAAAGLAARLKQLA 387
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
DVLG+L E + L+ A R + A+ V LI+ R A+ NKD+++SD+IR +
Sbjct: 388 DVLGVLQ-----LEADEFLQAGAAGRVDAAQ--VEALIQARLAARANKDWAESDRIRDQI 440
Query: 191 TRKGIALMDVRKETIWR 207
T G+ L D + T WR
Sbjct: 441 TAMGVVLEDGKGGTTWR 457
>gi|392530509|ref|ZP_10277646.1| cysteine--tRNA ligase [Carnobacterium maltaromaticum ATCC 35586]
Length = 469
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 63 PAAEDCIKKL---RDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
P +D ++L + F T M DD N ++ +T + K +N +Q + + ++IE++
Sbjct: 341 PTDQDYFQQLAEFKQTFITEMDDDFNAANGIT-VIYELAKVMNIYSEQAEVSK-AVIEAM 398
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
L + K +L V G+ E +AEL + ++ L+ ER A+ K+
Sbjct: 399 LGL---FKELLQVFGITLE----------------NQAELLDENIEQLLSERTIARAEKN 439
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
F++SD+IR L +GI + D + T WR
Sbjct: 440 FARSDEIRDLLKAEGIIIDDTPQGTRWR 467
>gi|319956986|ref|YP_004168249.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
gi|319419390|gb|ADV46500.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
Length = 470
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEG 139
M+DDLNTS L A +D + N + L +LL + + ++LG G
Sbjct: 354 MADDLNTSKAL--AIVDEMVSAANEALDANPRDKVLKRTLL---GNIAFIDELLGF---G 405
Query: 140 STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
+ Q +R E+ I ER AKK KDFSK+D IR +L KGIALMD
Sbjct: 406 GSDPYAWFQHGVSEEERQEIEAK-----IAERDAAKKAKDFSKADTIRDELKEKGIALMD 460
Query: 200 VRKETIW 206
+ T W
Sbjct: 461 TPEGTKW 467
>gi|224536743|ref|ZP_03677282.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521659|gb|EEF90764.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L+ DA +G ITP+A + K +R++ Y M+DDLNT I+ D
Sbjct: 334 LQAAEKGLTRMM-DAVNGLEKITPSATSSVDVKAVREKCYEAMNDDLNTP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ INN L ++ + D+LGL + ++ +
Sbjct: 392 ARMINNIIAGNDTITADDLKELKETFHL-----FCFDILGL------------KEENNSN 434
Query: 155 KRAELAENDVLH-LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ E+A V+ L+EER AK NKD++ SD+IR +LT G + D + W+
Sbjct: 435 EEREVAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFEIKDGKDGCEWK 488
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 52 FQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINN-SKKQ 107
FQE A G P D I L F M +D NT+ L F +F++ +KQ
Sbjct: 338 FQEKALRGQ-DPELFDQIAALSGAFREAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQ 396
Query: 108 PKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL 167
K +L + + +VL +L PE + + LK +K L E +V
Sbjct: 397 LKGPASALARAGADAIRDHALVLGLLTREPE--AFQAEQRSLK---IKSTGLTEAEVERC 451
Query: 168 IEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
IE R A+++K+F+++D++R ++ +KGI L D T WR
Sbjct: 452 IELRRQARQDKNFAEADRLREEIEKKGIQLEDSPAGTRWR 491
>gi|420492913|ref|ZP_14991487.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-15]
gi|420526931|ref|ZP_15025332.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-15b]
gi|393107352|gb|EJC07895.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-15]
gi|393132236|gb|EJC32659.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-15b]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADHIREELLKQKIALMDTPQGTIW 461
>gi|298377784|ref|ZP_06987734.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
gi|298265230|gb|EFI06893.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
Length = 491
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 41 TLQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F DA
Sbjct: 333 ALQAAEKGLSRLMEAYGHLMKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DA 391
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALK 155
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 392 ARAINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASAGGSNYETFS----K 443
Query: 156 RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 444 AVDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|407475972|ref|YP_006789849.1| cysteinyl-tRNA synthetase [Exiguobacterium antarcticum B7]
gi|407060051|gb|AFS69241.1| cysteinyl-tRNA synthetase [Exiguobacterium antarcticum B7]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I+ ++ F T M DD NT++ +T F L N Q ++E L + +E+
Sbjct: 346 IEAIKQHFVTSMDDDFNTANAVTDLF--DLSKEANLYLGEDQVATEVLERFLAVFDELST 403
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VL V + +G L + +V LI +R TA+K++DF+++D IR
Sbjct: 404 VLGVTLTVDKG-------------------LLDEEVEQLIRDRDTARKDRDFARADAIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + W+
Sbjct: 445 QLRDQGILLEDTAQGMRWK 463
>gi|420470752|ref|ZP_14969461.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-11]
gi|393086185|gb|EJB86864.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-11]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + D+ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQDIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|365851757|ref|ZP_09392177.1| cysteine--tRNA ligase [Lactobacillus parafarraginis F0439]
gi|363716136|gb|EHL99552.1| cysteine--tRNA ligase [Lactobacillus parafarraginis F0439]
Length = 468
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+A +GS P E ++++ +F M DD N + + + + +KF N ++ +
Sbjct: 336 HNAEAGS-DPKVEQEVRQIIADFTDAMDDDFNVQNGIAAVY-ELVKFAN----MYSERDI 389
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
SL I N + + + G+ L+++EL + ++ LI ER
Sbjct: 390 VFQNSLQFIINTLTELSSIFGI-----------------KLEQSELKDEEIWDLIHERER 432
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ NKDF +SD+IR L +G+ L D + T +R
Sbjct: 433 ARANKDFIRSDEIRESLKARGVILEDTPQGTRFR 466
>gi|385227122|ref|YP_005787046.1| cysteinyl-tRNA synthetase [Helicobacter pylori SNT49]
gi|344332035|gb|AEN17065.1| cysteinyl-tRNA synthetase [Helicobacter pylori SNT49]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ S Y + L +E + D+ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKNPSAYFQ---------LGVSESEKQDIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D+IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADRIREELLNHKIALMDTPQGTIW 461
>gi|407770872|ref|ZP_11118237.1| cysteinyl-tRNA synthetase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286076|gb|EKF11567.1| cysteinyl-tRNA synthetase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 459
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LI++RA AKKN+DF+ +DQIR DL +GI L D ++ T W+
Sbjct: 417 LIQQRAEAKKNRDFATADQIRNDLLARGILLEDFKEGTSWK 457
>gi|225873812|ref|YP_002755271.1| cysteinyl-tRNA synthetase [Acidobacterium capsulatum ATCC 51196]
gi|225791240|gb|ACO31330.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
Length = 491
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 60 SITPAAEDC------IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
++TPA E +K R EF + +DLNT+ A D ++ N+
Sbjct: 330 TVTPATEKNAALSTETEKARKEFRAGLENDLNTAEA-RAAIFDLVR-AGNAAADAGTLST 387
Query: 114 SLIESLLKIENEVKVVLDVL--------GLLPEGSTYSEVLQQLKDKALKRAELAENDVL 165
+ +L + E V +VL E + L + + L + L++ +
Sbjct: 388 ENVAEILAVLREFDSVFNVLEDRDAAITKFALEWAEQEGRLNEAAHEVLAQRGLSDEQIQ 447
Query: 166 HLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L++ER AK+ ++F+++DQIR +L KGI + D ++ W+
Sbjct: 448 ALVDERTKAKRARNFARADQIRNELAEKGIVIEDSKEGVRWK 489
>gi|409099151|ref|ZP_11219175.1| cysteinyl-tRNA synthetase [Pedobacter agri PB92]
Length = 486
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I L+++ M+DD N S IL +A++ IN + +E L + N+
Sbjct: 364 IDALKEKCIAAMNDDFN-SPILIAELFEAVRIINTVYDGKAKISAESLEKLKALINDF-- 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL-IEERATAKKNKDFSKSDQIR 187
V D+LGL E + +++ N VL + I+ R AK NKD++ SD+IR
Sbjct: 421 VFDILGLKDEDAGSNDL----------------NGVLEMVIDLRTEAKANKDYATSDKIR 464
Query: 188 ADLTRKGIALMDVRKETIW 206
L GI L D ++ T W
Sbjct: 465 IGLQELGIQLKDSKEGTTW 483
>gi|125718833|ref|YP_001035966.1| cysteinyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|125498750|gb|ABN45416.1| Cysteinyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
Length = 447
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP--KQQQLSLIESLL-----------KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + + +++ L N + VV ++ + G+ +E
Sbjct: 318 LKYLKNTYEQPFTGQAESAQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V L + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKGALAELLEVFGIVFVEEVLDADIERLIEERQAARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|154490024|ref|ZP_02030285.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
43184]
gi|423723024|ref|ZP_17697177.1| cysteinyl-tRNA synthetase [Parabacteroides merdae CL09T00C40]
gi|154089466|gb|EDN88510.1| cysteine--tRNA ligase [Parabacteroides merdae ATCC 43184]
gi|409241854|gb|EKN34621.1| cysteinyl-tRNA synthetase [Parabacteroides merdae CL09T00C40]
Length = 492
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K LR + Y M+DDLN+ I+ DA + IN+ K ++ L + +
Sbjct: 364 VKDLRRKCYDAMNDDLNSP-IVIAHLFDAARAINSVKDGKATISAEDLKELQDVFH--TF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V D+LG+ E ++ + KA+ D+L I R AK NKD++ SD+IR
Sbjct: 421 VFDILGIKDEAASGGSNNNEAFGKAM--------DLLLTI--RQQAKANKDWATSDKIRN 470
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D + W+
Sbjct: 471 ELTAIGFDIKDTKDGAEWK 489
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 41 TLQDCEVALSPFQEDARS-GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK 99
+L++ + AL F + ++ PA D + F T M DD N+ D ++
Sbjct: 310 SLREAKSALERFYNGLKGLPNVAPAGGD---EFVARFATAMDDDFNSPEACA-VLFDMIR 365
Query: 100 FINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
+N ++ L L E+ VL VL L PE L+ A + +
Sbjct: 366 EVNRLRESDPTAAAQLAARL----KELASVLGVLQLEPEAF--------LQAGAAGKVDA 413
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AE V LI R TA+ K++++SD+IR LT G+ L D + T WR
Sbjct: 414 AE--VEALIAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 459
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 76 FYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
F M DDLNT+ + F + + K K ++ + E L +I V +V+
Sbjct: 354 FTAAMDDDLNTAQAMGHVFGLVRLAGRLMEDKTLVKSRETA--EVLRRILANFAVWAEVI 411
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
G+ G+ + L +LK L R + V L+ ER A+K KDF++SD IR +L
Sbjct: 412 GVF--GTDAAAFLAELKACRLTRLGIDATRVDALVAERQDARKAKDFARSDAIRDELAVL 469
Query: 194 GIALMDVRKETIW 206
G+ +MD W
Sbjct: 470 GVTVMDTPTGPQW 482
>gi|385811948|ref|YP_005848339.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus fermentum CECT 5716]
gi|299782847|gb|ADJ40845.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus fermentum CECT 5716]
Length = 473
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA SG+ + + R F M DD+N + + + + ++F N Q +Q+L
Sbjct: 337 KDATSGT-DGGVQRQLADFRARFVAAMDDDINVQNGIAVVY-ELMRFAN----QYVEQRL 390
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E ++ I+ +K ++ V G+ D A+ E+ + + LIE+R
Sbjct: 391 VQREPIVAIQLMLKRLVAVFGV---------------DLAVSATEINDEKIKELIEKRNA 435
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ KDF+ SDQIR L +GI L D + T +R
Sbjct: 436 ARAEKDFALSDQIRDQLRDQGIILEDTPQGTRYR 469
>gi|313204739|ref|YP_004043396.1| cysteinyl-tRNA synthetase [Paludibacter propionicigenes WB4]
gi|312444055|gb|ADQ80411.1| cysteinyl-tRNA synthetase [Paludibacter propionicigenes WB4]
Length = 488
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 62 TPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIES 118
+ A+ LR + M+DD NT I DALK IN + K+ + L ++S
Sbjct: 357 STASSVYTSSLRSKCEEAMNDDFNTP-IAIAHLFDALKAINLIHDGKETISAKDLEELKS 415
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
+ K+ + DVLGL SEV +A K A V L+ R AK+NK
Sbjct: 416 VFKV-----FIEDVLGLK------SEVATSGGSEAYKGA------VDLLLNMRLAAKQNK 458
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
D++ SD+IR +LT G + D + W+
Sbjct: 459 DWATSDKIRNELTALGFEIKDTKDGFEWK 487
>gi|424788450|ref|ZP_18215204.1| cysteine--tRNA ligase [Streptococcus intermedius BA1]
gi|422112671|gb|EKU16443.1| cysteine--tRNA ligase [Streptococcus intermedius BA1]
Length = 423
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP--KQQQLSLIESLL-----------KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + +++LL N + VV ++ + G+ +E
Sbjct: 294 LKYLKNTYEQPFTGQTDSAQLQTLLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 353
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + + E+ + DV LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 354 VKEAFAKLLEVFGIVFVEEVLDADVERLIEERQVARANRDFATADRIRDELAAQGIKLLD 413
Query: 200 VRKETIW 206
+ W
Sbjct: 414 TKDGVRW 420
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD TS + A L L N + P+ +L +K + VLGL
Sbjct: 346 FKAAMDDDFGTSEAV--AVLFELAGEVNKSRDPQLARL------------LKDLGGVLGL 391
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L + EV Q + EL+ V LI+ R A+ KD+++SD+IR +LT KGI
Sbjct: 392 L---TRDPEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGI 445
Query: 196 ALMDVRKETIWR 207
L D TIWR
Sbjct: 446 VLEDGAGGTIWR 457
>gi|380693180|ref|ZP_09858039.1| cysteinyl-tRNA synthetase [Bacteroides faecis MAJ27]
Length = 493
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITP+A +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPSATTSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNAAISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ ++ D++GL E K + R V L+E+R
Sbjct: 413 DNLKETFRL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEVKDTKDGFEWR 490
>gi|88800332|ref|ZP_01115898.1| cysteinyl-tRNA synthetase [Reinekea blandensis MED297]
gi|88776909|gb|EAR08118.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
Length = 461
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 29/142 (20%)
Query: 72 LRD-EFYTRMSDDLNTS------HILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+RD EF+ + DDLNT H LT F K + ++ +L ++
Sbjct: 338 IRDTEFFAMLLDDLNTPKAFANLHELTTRFF---------KAESDDERAAL-------KS 381
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
E+ + D +G++ + Q D + A+ E L+EER AK+ KDF+++D
Sbjct: 382 EIHAIADFIGVMQMDA--QAWFQGTSDDSALSADAIEA----LLEERVAAKEAKDFARAD 435
Query: 185 QIRADLTRKGIALMDVRKETIW 206
+IR L +GI + D R+ T+W
Sbjct: 436 EIRDQLAAEGIQIKDTREGTLW 457
>gi|334136720|ref|ZP_08510177.1| cysteine--tRNA ligase [Paenibacillus sp. HGF7]
gi|333605741|gb|EGL17098.1| cysteine--tRNA ligase [Paenibacillus sp. HGF7]
Length = 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYT--GNETITLQDCEVALSPFQEDARSGSITPAAEDC 68
P +R +L + N L S T GN +Q+C L A+ ++ E
Sbjct: 286 PETLRFFMLSSHYRNPLNFSEDGLTQAGNGLDRIQNCVTNLKHRLGIAQEDALDDQVEAR 345
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K++ +F ++M DD NT +T F + + + +Q+++S +L I +
Sbjct: 346 VKEIEAQFISKMDDDFNTPDAITAVF----DLVTEANRVLQQERVSA-ATLRLIMGRFRN 400
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VLG+L A + EL + ++ LIEER A++ K+++++D+IR
Sbjct: 401 FDSVLGIL----------------AREEEELLDEEIEGLIEERNEARRAKNWARADEIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
LT KGI L D + WR
Sbjct: 445 LLTEKGIYLEDTPQGIRWR 463
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD TS + A L L N + P+ +L +K + VLGL
Sbjct: 344 FKAAMDDDFGTSEAV--AVLFELAGEVNKSRDPQLARL------------LKDLGGVLGL 389
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L + EV Q + EL+ V LI+ R A+ KD+++SD+IR +LT KGI
Sbjct: 390 L---TRDPEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGI 443
Query: 196 ALMDVRKETIWR 207
L D TIWR
Sbjct: 444 VLEDGAGGTIWR 455
>gi|258509321|ref|YP_003172072.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|385828957|ref|YP_005866729.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|257149248|emb|CAR88221.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|259650602|dbj|BAI42764.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
Length = 468
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K L+D F M DD+N + LT F D K +N + +Q ES+ + N+
Sbjct: 350 LKTLKDRFIAAMDDDVNVQNGLTVLF-DLAKLLNEYANEDTVKQ----ESVNDLLNQYDA 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G++ T + ++ L++ R A+ KDF+KSD+IR
Sbjct: 405 WLQIFGVVFTDPTNLDA-----------------NIDALVKARDVARAAKDFAKSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 448 QLAAQGIILEDTPQGTRWR 466
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 31/147 (21%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQP----KQQQLSLIESLLKIENEVKVVLD 131
F M DD NT L A L+ ++ N ++ K Q L+++ ++ +
Sbjct: 353 FREAMDDDFNTPEAL--ALLNEVRHALNRAREAGDTEKGQSLAVL---------LRSLGG 401
Query: 132 VLGLLPEGSTYSEVLQQLKDK-----------ALKRAELAENDVLHLIEERATAKKNKDF 180
+LGLL E Q L+D A + A L+ + + L+ +R A+KNKD+
Sbjct: 402 ILGLLAH-----EPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDW 456
Query: 181 SKSDQIRADLTRKGIALMDVRKETIWR 207
+++D+IR L +GI L D T+WR
Sbjct: 457 AEADRIRGILKDQGITLEDTAAGTLWR 483
>gi|421769976|ref|ZP_16206680.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
gi|421773652|ref|ZP_16210292.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
gi|411181556|gb|EKS48725.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
gi|411183336|gb|EKS50475.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
Length = 468
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K L+D F M DD+N + LT F D K +N + +Q ES+ + N+
Sbjct: 350 LKTLKDRFIAAMDDDVNVQNGLTVLF-DLAKLLNEYANEDTVKQ----ESVNDLLNQYDA 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G++ T + ++ L++ R A+ KDF+KSD+IR
Sbjct: 405 WLQIFGVVFTDPTNLDA-----------------NIDALVKARDVARAAKDFAKSDEIRD 447
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T WR
Sbjct: 448 QLAAQGIILEDTPQGTRWR 466
>gi|423346457|ref|ZP_17324145.1| cysteinyl-tRNA synthetase [Parabacteroides merdae CL03T12C32]
gi|409220275|gb|EKN13231.1| cysteinyl-tRNA synthetase [Parabacteroides merdae CL03T12C32]
Length = 492
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K LR + Y M+DDLN+ I+ DA + IN+ K ++ L + +
Sbjct: 364 VKDLRRKCYDAMNDDLNSP-IVIAHLFDAARAINSVKDGKATISAEDLKELQDVFH--TF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V D+LG+ E ++ + KA+ D+L I R AK NKD++ SD+IR
Sbjct: 421 VFDILGIKDEAASGGSNNNEAFGKAM--------DLLLTI--RQQAKANKDWATSDKIRN 470
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D + W+
Sbjct: 471 ELTAIGFDIKDTKDGAEWK 489
>gi|381208309|ref|ZP_09915380.1| cysteinyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 470
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I +L ++F M DD NT++ ++ F L N + KQ +I + + +
Sbjct: 347 ISQLHNQFEAAMDDDFNTANAISVLF--ELTKEANVYLEEKQTDTHVIRAF---QESMNT 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
VLDVLG+ E L + D+ L++ R A+KN+DF ++D+IR
Sbjct: 402 VLDVLGIRME----------------TEEPLLDEDIEALLKARTEARKNRDFGRADEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
L K I L D + T W+
Sbjct: 446 ALKGKNIILEDTPQGTRWK 464
>gi|384098058|ref|ZP_09999177.1| cysteinyl-tRNA synthetase [Imtechella halotolerans K1]
gi|383836204|gb|EID75617.1| cysteinyl-tRNA synthetase [Imtechella halotolerans K1]
Length = 494
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 77 YTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
Y M+DD N S IL +A+++IN + K+Q LSL + L V D+L
Sbjct: 376 YDAMNDDFN-SPILIAQLFEAVRYINLIKDGKEQITATDLSLFTASLN-----AFVFDIL 429
Query: 134 GL---LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
GL EGS ++ L + EL LI+ RA A+ NKD++ SD+IR +L
Sbjct: 430 GLENVTNEGSNQNQKLNGV-------VEL-------LIQLRAEARANKDWALSDKIRIEL 475
Query: 191 TRKGIALMDVRKET 204
GI L D + T
Sbjct: 476 ESLGIQLKDGKDGT 489
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+ IK R +FY M DD NT+ L F +A+ K++PK+ +++ L+
Sbjct: 348 EAIKNARKKFYEAMDDDFNTAEALKAVFEVSNAINKYLTEKERPKE---AILRKALEF-- 402
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
KVV ++ G+ + Y + ++ ++ L + L++ R+ +K K F +D
Sbjct: 403 -FKVVSEIFGIFED---YFKEEKREIEEELIKV---------LVDVRSQLRKEKRFDLAD 449
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
+IR +L R GI L D +ET+W+
Sbjct: 450 KIREELRRLGIQLEDRGQETVWK 472
>gi|422877303|ref|ZP_16923773.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1056]
gi|332359942|gb|EGJ37756.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1056]
Length = 450
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K D+F T M +D N ++ +T F + K+IN+ + + E+ K+
Sbjct: 341 LKAFLDKFTTAMDEDFNAANGITVVF-ELAKWINSGNYTAQVK-----EAFAKL------ 388
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L+V G++ + E E+ E D+ LIEER A+ N+DF+ +D+IR
Sbjct: 389 -LEVFGIV-----FVE-------------EVLEADIERLIEERQEARANRDFATADRIRD 429
Query: 189 DLTRKGIALMDVRKETIW 206
+L +GI L+D + W
Sbjct: 430 ELADQGIKLLDTKDGVRW 447
>gi|150024693|ref|YP_001295519.1| cysteinyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
gi|187629821|sp|A6GX80.1|SYC_FLAPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149771234|emb|CAL42703.1| Cysteine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
Length = 495
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
IK + Y M+DD NT IL + ++F+N K+ + + L N
Sbjct: 371 IKAWKQNCYDAMNDDFNTP-ILIAHLFEGVRFVNVLKENKETITTEDLLDFLTTMN--AF 427
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V DVLGL E ++ DK E+ LI+ R A+ NKDF+ SDQIR
Sbjct: 428 VFDVLGLEDE-----KLATNNNDKLDGVVEM-------LIQMRKQARDNKDFAMSDQIRD 475
Query: 189 DLTRKGIALMDVRKETIW 206
L GI L D ++ T +
Sbjct: 476 QLLALGIQLKDSKEGTTF 493
>gi|86141205|ref|ZP_01059751.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
gi|85831764|gb|EAQ50219.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
Length = 495
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 77 YTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
Y M+DD N S IL +A KFI+ +SK Q L ++ +K V DVL
Sbjct: 377 YDAMNDDFN-SPILIAQLFEAAKFIHQIKDSKAAITQTDLEDFKTTIK-----AFVFDVL 430
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL + + DK EL LI+ R A+ NKDF+ SDQIR L
Sbjct: 431 GL----EDVNAAAEANTDKLNGAIEL-------LIQLRKEARANKDFATSDQIRDQLLEL 479
Query: 194 GIALMDVRKETIW 206
GI L D R+ T +
Sbjct: 480 GIQLKDGREGTTY 492
>gi|340618735|ref|YP_004737188.1| cysteinyl-tRNA synthetase [Zobellia galactanivorans]
gi|339733532|emb|CAZ96909.1| Cysteinyl-tRNA synthetase [Zobellia galactanivorans]
Length = 492
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 56 ARSGSITPAAEDC-IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
A G T ++ D ++ + + Y M+DD NT IL +A+K +N K+ + +
Sbjct: 354 AMEGLETGSSSDFDVETWKQQCYDAMNDDFNTP-ILIANLFEAVKHVNLIKEGKESITAN 412
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATA 174
E+L N V D+LGL +G + + A K + + E LIE R A
Sbjct: 413 DKETLAHTFN--AFVFDILGLEQKGGS--------TEDAGKLSGVVE----LLIELRKEA 458
Query: 175 KKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
++NKDF+ SD+IR L GI L D ++ T +
Sbjct: 459 RENKDFATSDKIRDQLAELGIQLKDGKEGTTF 490
>gi|184154737|ref|YP_001843077.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
gi|227514004|ref|ZP_03944053.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
gi|260663234|ref|ZP_05864126.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
gi|229558713|sp|B2GAB5.1|SYC_LACF3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183226081|dbj|BAG26597.1| cysteinyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
gi|227087648|gb|EEI22960.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
gi|260552426|gb|EEX25477.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
Length = 472
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
+DA SG+ + + R F M DD+N + + + + ++F N Q +Q+L
Sbjct: 336 KDATSGT-DGGVQRQLADFRARFVAAMDDDINVQNGIAVVY-ELMRFAN----QYVEQRL 389
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E ++ I+ +K ++ V G+ D A+ E+ + + LIE+R
Sbjct: 390 VQREPIVAIQLMLKRLVAVFGV---------------DLAVSATEINDEKIKELIEKRNA 434
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A+ KDF+ SDQIR L +GI L D + T +R
Sbjct: 435 ARAEKDFALSDQIRDQLRDQGIILEDTPQGTRYR 468
>gi|420437511|ref|ZP_14936494.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-28]
gi|393052333|gb|EJB53280.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-28]
Length = 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VA+ + + G A + I+ R +FY M DD NT+ L F +
Sbjct: 322 TLENIRVAMERAEISFKWGEEEFEAYEAIRDGRKKFYDAMDDDFNTAEALKAVF-EVSNA 380
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN Q ++ + S++ + K+V +V G+ + Y + +++AL
Sbjct: 381 INRYLTQVEKPKESILRKAWEF---FKMVSEVFGIFED---YFREQKAGEEEAL------ 428
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ LI+ RA +K + F +D+IR +L GI L D + T+W+
Sbjct: 429 ---IKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLEDTPQGTVWK 472
>gi|258648227|ref|ZP_05735696.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
gi|260852123|gb|EEX71992.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
Length = 495
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
G IT E + L + Y ++DDLN+ +++ F DA + IN + +E
Sbjct: 360 GGEIT---ESYAEALSERCYAALNDDLNSPIVISHLF-DACRLINQVAYKQTTITPDGLE 415
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+L ++ + D+LGL PE D +R E V L++ R AK
Sbjct: 416 ALKRVFS--LFAFDLLGLKPEA-----------DGNAQREESFGKAVDLLLDVRQQAKAA 462
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
KD++ SD+IR DL G A+ D + W+
Sbjct: 463 KDWATSDKIRDDLAALGFAVKDTKDGATWK 492
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
S+ PA + KK F M+DD NT + D + IN K + K L L
Sbjct: 361 SVAPAGGEIFKK---RFEDAMNDDFNTPEAYS-VLFDMAREINRLKSENKVAANELASEL 416
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
K+ VLGLL + E Q + E+A+ + LI++R A+KNK+
Sbjct: 417 RKLAG-------VLGLLEQDP---EAFLQGNAQGEGDEEVAK--IEALIKQRNNARKNKE 464
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D R +LT GI L D + T WR
Sbjct: 465 WALADAARDELTAMGIVLEDGAQGTTWR 492
>gi|388456175|ref|ZP_10138470.1| cysteinyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 454
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
EF M+DD NT L+ F + + IN S+ S+I + N +K + ++G
Sbjct: 341 EFNQAMNDDFNTPVALSVLFQLSHE-INKSR--------SVI-----LANTLKYLAGIMG 386
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
+L E + LQ AE + ++ LI ER A+ +K++ ++DQIRADL ++G
Sbjct: 387 ILQEDP--ASFLQS------GFAEEDKTEIEELIAERLQARADKNWGRADQIRADLLKRG 438
Query: 195 IALMDVRKETIWR 207
I L D T WR
Sbjct: 439 IELEDGPNGTTWR 451
>gi|374709175|ref|ZP_09713609.1| cysteinyl-tRNA synthetase [Sporolactobacillus inulinus CASD]
Length = 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 58 SGSITPAA-EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLI 116
+GS + AA E I+K R+ F M+DD NT++ + F DA + N + Q + S I
Sbjct: 331 NGSESAAANETIIEKYRNPFIEAMNDDFNTANAIAVLF-DAARDANIAL----QNEASTI 385
Query: 117 ESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKK 176
E L + + VLGL E +T S + + DV LI++R A+K
Sbjct: 386 EQLQAYLQVLTELPAVLGLTLEDATGS---------------IVDRDVEALIQKREEARK 430
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
N+ F +D IR L GI L D + W+
Sbjct: 431 NRAFDVADAIRDQLKDAGIILEDTPQGVRWK 461
>gi|295698510|ref|YP_003603165.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
gi|291157420|gb|ADD79865.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
Length = 469
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++K F M+DD NT + F + K IN KK +++ L KI +K
Sbjct: 342 LEKFEKAFIEAMNDDFNTPKAYSILFKIS-KEINLQKKI----NINIANRLAKI---LKK 393
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ +VLGLL + V Q K + E+ ++ ++I+ R A+KNK++ ++D+IR
Sbjct: 394 MANVLGLLNQS-----VHQFFKINRITLKEIKNQEIENIIQIREKARKNKNWEEADRIRK 448
Query: 189 DLTRKGIALMDVRKETIWR 207
DL + GI L D +T WR
Sbjct: 449 DLYQIGIILEDRINKTYWR 467
>gi|425789467|ref|YP_007017387.1| cysteinyl-tRNA synthetase [Helicobacter pylori Aklavik117]
gi|425627782|gb|AFX91250.1| cysteinyl-tRNA synthetase [Helicobacter pylori Aklavik117]
Length = 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D+IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADRIREELLKQKIALMDTPQGTIW 461
>gi|182683526|ref|YP_001835273.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|303253920|ref|ZP_07340041.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|303260086|ref|ZP_07346059.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|303261270|ref|ZP_07347218.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|303263935|ref|ZP_07349856.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|303265926|ref|ZP_07351822.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|303268308|ref|ZP_07354105.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|387758875|ref|YP_006065853.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|418093448|ref|ZP_12730578.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA49138]
gi|418138916|ref|ZP_12775747.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA13338]
gi|418141207|ref|ZP_12778020.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA13455]
gi|418152345|ref|ZP_12789085.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA16121]
gi|418163944|ref|ZP_12800618.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17371]
gi|418179959|ref|ZP_12816532.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41688]
gi|418199633|ref|ZP_12836080.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47976]
gi|419514165|ref|ZP_14053793.1| cysteine--tRNA ligase [Streptococcus pneumoniae England14-9]
gi|419518416|ref|ZP_14058024.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA08825]
gi|419522857|ref|ZP_14062439.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA13723]
gi|421267813|ref|ZP_15718685.1| cysteine--tRNA ligase [Streptococcus pneumoniae SPAR95]
gi|421297208|ref|ZP_15747911.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA58581]
gi|182628860|gb|ACB89808.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|301801464|emb|CBW34156.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|302599096|gb|EFL66121.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|302637404|gb|EFL67891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|302638781|gb|EFL69243.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|302642146|gb|EFL72496.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|302644510|gb|EFL74761.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|302646340|gb|EFL76566.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|353767013|gb|EHD47552.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA49138]
gi|353805458|gb|EHD85732.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA13455]
gi|353818990|gb|EHD99188.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA16121]
gi|353832271|gb|EHE12389.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17371]
gi|353846287|gb|EHE26320.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41688]
gi|353866311|gb|EHE46213.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47976]
gi|353905753|gb|EHE81169.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA13338]
gi|379559335|gb|EHZ24364.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA13723]
gi|379638655|gb|EIA03200.1| cysteine--tRNA ligase [Streptococcus pneumoniae England14-9]
gi|379642020|gb|EIA06554.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA08825]
gi|395871237|gb|EJG82343.1| cysteine--tRNA ligase [Streptococcus pneumoniae SPAR95]
gi|395892782|gb|EJH03772.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA58581]
Length = 447
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDAS 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + D+ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEIFGIVFVEEVLDADIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 80 MSDDLNTSHILTGAF--LDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLP 137
M DD+NT+ + F + I K K + ++ ++I ++K +VLG+
Sbjct: 358 MEDDMNTAGAMGHMFTLIRLAGRIGEEKSWRKSEGGR--DAWIRILEDMKKWGEVLGIFT 415
Query: 138 EGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
E L++LK L+R + V L+ R A+KNKDF++SD+IR +L G+ +
Sbjct: 416 RDP--KEFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRDELIELGVEV 473
Query: 198 MDVRKETIW 206
D + +W
Sbjct: 474 KDTPQGAVW 482
>gi|374386326|ref|ZP_09643826.1| cysteine-tRNA ligase [Odoribacter laneus YIT 12061]
gi|373224255|gb|EHP46595.1| cysteine-tRNA ligase [Odoribacter laneus YIT 12061]
Length = 490
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 74 DEFYTR----MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
DE Y + M DDLNT IL + ++ IN+ +Q ++ L K+ ++ V
Sbjct: 365 DELYVKCFEAMDDDLNTP-ILISQLFEGVRMINSIAAGKEQIDTEQLDKLKKLYHDF--V 421
Query: 130 LDVLGLLPEGSTYS---EVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
D+LGL EG T EVL ++ D + R AK+ KD++ SD+I
Sbjct: 422 FDILGLKTEGETVGKDHEVLGKVLDMVMSI--------------RTEAKQKKDWATSDKI 467
Query: 187 RADLTRKGIALMDVRKETIW 206
R +L G+ + D ++ W
Sbjct: 468 RDELKAAGVQVKDTKEGYEW 487
>gi|417646120|ref|ZP_12295999.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|418629603|ref|ZP_13192100.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU127]
gi|329729466|gb|EGG65869.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|374833366|gb|EHR97054.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU127]
Length = 466
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I K+ ++F M DD NT++ +T A+ D K N + + + + L + + +
Sbjct: 345 IDKILNQFEAVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVLNRFKEVYSI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ LK K + EL + D+ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGV------------PLKSKETE--ELLDEDIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKARHIILEDT 457
>gi|313124319|ref|YP_004034578.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280882|gb|ADQ61601.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 474
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS 114
DA G P + + +F M DD N + LT A +AL +N++ K +
Sbjct: 337 DATEGLPDPDLAKLVTETTAKFEAAMDDDFNVQNALT-AIYEALPAVNSNANAEKADK-- 393
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAEND---VLHLIEER 171
ESL ++ L V GL +V DK L A+ A ND + L+ +R
Sbjct: 394 --ESLRLFAKKLAAWLSVFGL--------DV-----DKLL--AKEAGNDDAVIEELVAQR 436
Query: 172 ATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
A+KNKD++KSD++R L G+ L D + T W
Sbjct: 437 TEARKNKDWAKSDELRDQLKEMGVVLKDTPQGTRW 471
>gi|420460389|ref|ZP_14959188.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-27]
gi|393077491|gb|EJB78240.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-27]
Length = 465
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|410727955|ref|ZP_11366148.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
gi|410597515|gb|EKQ52126.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
Length = 466
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K RD F +M DD NT+ ++ F D + INN+ I S ++ ++
Sbjct: 347 LDKYRDRFIEKMDDDFNTADAISVLF-DLTRDINNNVD---------INSSAELCDKANE 396
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
++ LG P G +LQ K L E ++ LIE+R A+KNKDF+ +D+IR
Sbjct: 397 LIRELGK-PLG-----ILQSHMKKDL------ETEIQELIEKRQQARKNKDFALADKIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
DL + I L D + W+
Sbjct: 445 DLKSRNIILEDTPQGVRWK 463
>gi|418976173|ref|ZP_13524059.1| cysteine--tRNA ligase [Streptococcus mitis SK575]
gi|383351847|gb|EID29610.1| cysteine--tRNA ligase [Streptococcus mitis SK575]
Length = 447
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDAS 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + D+ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEVFGIVFVEEVLDADIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|445116824|ref|ZP_21378655.1| cysteinyl-tRNA synthetase [Prevotella nigrescens F0103]
gi|444839993|gb|ELX67037.1| cysteinyl-tRNA synthetase [Prevotella nigrescens F0103]
Length = 495
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 62 TPAAED-----CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
T AA D + LR + Y M+DDL T +++ F +A +N + K Q ++ L
Sbjct: 355 TAAASDENTKKFVSALRQKCYDAMNDDLMTPAVISNLF-EACHIVNLLIDHKAQISEEDL 413
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
+ +++ D+LGL+ E ++ + K + +++ RA
Sbjct: 414 KELNETMRL-----FAFDILGLVNERGANNDAREAAYGKVVDM----------VLDLRAK 458
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SDQIR L G + D + W+
Sbjct: 459 AKANKDWAVSDQIRDALAEAGFQVKDTKDGVTWK 492
>gi|421489827|ref|ZP_15937203.1| cysteine--tRNA ligase [Streptococcus anginosus SK1138]
gi|400374415|gb|EJP27334.1| cysteine--tRNA ligase [Streptococcus anginosus SK1138]
Length = 447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 98 LKFINNSKKQPKQQQLSL-------------IESLLKIENEVKVVLDVLGLLPEG----- 139
LK++ N+ +QP + L ++ N + VV ++ + G
Sbjct: 318 LKYLKNTYEQPFTGTVDLTDLQVFLDKFTTAMDEDFNAANGITVVFELAKWINSGHYNQE 377
Query: 140 --STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
S ++E+LQ + AE+ + D+ LIE+R A+ KDF+ +D+IR +L KGI L
Sbjct: 378 VKSAFAELLQVFG--IVFTAEVLDADIEALIEQRQAARVAKDFATADKIRDELAAKGIKL 435
Query: 198 MDVRKETIW 206
+D + W
Sbjct: 436 LDTKDGVRW 444
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQ----QQLSLIESLLKIENEVKVVLD 131
F M DD NT+ + F D +K N Q + + LS + +L + +L
Sbjct: 346 FEAAMDDDFNTARAMATLF-DTVKTGNRILDQQGETVSPETLSAVSTLCADLKRMGSILG 404
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
+L P+ + + K+ L +L + + LI+ER A+++K+F+++D+IRA+L
Sbjct: 405 ILAQEPQ-----DYFRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELD 459
Query: 192 RKGIALMDVRKETIWR 207
I L D T W+
Sbjct: 460 AMNIVLEDGPDGTTWK 475
>gi|172056119|ref|YP_001812579.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|229558633|sp|B1YGS9.1|SYC_EXIS2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171988640|gb|ACB59562.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 465
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIES 118
G+ T + I++++ F T M DD NT++ +T F L N Q ++E
Sbjct: 336 GTATEKWLNRIEEIKQHFVTSMDDDFNTANAVTDLF--DLSKEANLYLGEDQVAKEVLER 393
Query: 119 LLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNK 178
L + E+ VL V + +G L + +V LI +R TA+K +
Sbjct: 394 FLAVFQELSTVLGVTLTIEKG-------------------LLDEEVEQLIRDRDTARKER 434
Query: 179 DFSKSDQIRADLTRKGIALMDVRKETIWR 207
DF+++D IR L +GI L D + W+
Sbjct: 435 DFARADAIRDQLRDQGILLEDTAQGMRWK 463
>gi|374337265|ref|YP_005093966.1| cysteinyl-tRNA synthetase [Streptococcus macedonicus ACA-DC 198]
gi|372283366|emb|CCF01540.1| Cysteinyl-tRNA synthetase [Streptococcus macedonicus ACA-DC 198]
Length = 448
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K + +F M DD NT++ +T F D K+IN+ +++
Sbjct: 339 LAKFKADFEVAMDDDFNTANGITVIF-DMAKWINSGNYNQ------------AVKDTFAK 385
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L V G++ E E+ + D+ LIE+R A+ NKDF+ +D IR
Sbjct: 386 MLAVFGIVFE------------------EEVLDADIEELIEKRQAARANKDFATADAIRD 427
Query: 189 DLTRKGIALMDVRKETIW 206
L +GI L+D + W
Sbjct: 428 QLAAQGIKLLDTKDGVRW 445
>gi|295396934|ref|ZP_06807057.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
gi|294974827|gb|EFG50531.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
Length = 473
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
IK L +EF M DD+NT + LT + + + + Q+++S I L +
Sbjct: 352 IKALENEFIEAMDDDVNTPNGLTVVY----RLMRDMNVYTNQKEVS-IPVLEAFKESFTA 406
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L + G+ L D+ EL +D+ LI+ER A+ +K+F+++D+IR
Sbjct: 407 LLTIFGV------------TLSDEQ----ELLADDIQALIDERNQARADKNFARADEIRD 450
Query: 189 DLTRKGIALMDVRKETIWR 207
L +GI L D + T W+
Sbjct: 451 QLKAEGIILDDTAQGTRWK 469
>gi|257866301|ref|ZP_05645954.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257873183|ref|ZP_05652836.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257800259|gb|EEV29287.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257807347|gb|EEV36169.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
Length = 470
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
T ++ + L+ A I A +++ + F M DD N ++ +T + + K+
Sbjct: 326 TYENAKFRLNSSHYQASDEEINAA---VLEEFEERFVKEMDDDFNAANGITVVY-ELAKW 381
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N + + P+ L L K L + G+ EL
Sbjct: 382 LNLASEDPETDLALLAAGLAKFSE----WLTIFGIY-----------------FVSEELL 420
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ ++ LI ER A+K KDF++SDQIR +L +GI L D + T WR
Sbjct: 421 DEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDTPQGTRWR 467
>gi|289168428|ref|YP_003446697.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
gi|288907995|emb|CBJ22835.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFSGTVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDAS 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + D+ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEVFGIVFVEEVLDADIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|424863390|ref|ZP_18287303.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86A]
gi|400758011|gb|EJP72222.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86A]
Length = 459
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 23/126 (18%)
Query: 82 DDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGST 141
DDLNT G + K I N++ + + + +L +LL ++ ++G+L E +
Sbjct: 354 DDLNTP----GLIANINKLIKNAESREEDDKPNLKSNLL-------LIGKLMGIL-EDQS 401
Query: 142 YSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVR 201
Y+++ + KDK V LIE+R+ AKK +DF +D+IR++L G+ + D
Sbjct: 402 YNQISDEFKDK-----------VDSLIEDRSNAKKKRDFELADKIRSELIDLGVEINDSP 450
Query: 202 KETIWR 207
+ T W+
Sbjct: 451 EGTTWK 456
>gi|378949916|ref|YP_005207404.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
gi|359759930|gb|AEV62009.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
Length = 460
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK 70
P VR LL+ + + S Y+ + L+D + AL F + PAA
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVPAAGGEAF 337
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+R F M+DD T + ++ IN + ++ L+ L E+ VL
Sbjct: 338 VVR--FTEVMNDDFGTPEACA-VLFEMVREIN----RLRESDLNAAAGLAARLKELASVL 390
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VL L E L+ A R + AE V LI+ R TA+ NKD+++SD+IR L
Sbjct: 391 GVLQL--------EADDFLQAGAEGRVDAAE--VEALIQARLTARANKDWAESDRIRDQL 440
Query: 191 TRKGIALMDVRKETIWR 207
T G+ L D + T WR
Sbjct: 441 TAMGVVLEDGKGGTTWR 457
>gi|262281989|ref|ZP_06059758.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
gi|262262443|gb|EEY81140.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
Length = 450
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A D ++ D+F M +D N ++ +T F + K+IN+ + + E+ K+
Sbjct: 336 ADSDQLQAFLDKFTAAMDEDFNAANGITVVF-ELAKWINSGNYTAEVK-----EAFAKL- 388
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
L+V G++ + E E+ + D+ LIEER A+ N+DF+ +
Sbjct: 389 ------LEVFGIV-----FVE-------------EVLDADIERLIEERQVARANRDFATA 424
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR DL +GI L+D + W
Sbjct: 425 DRIRDDLAAQGIKLLDTKDGVRW 447
>gi|225387932|ref|ZP_03757696.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
DSM 15981]
gi|225045975|gb|EEG56221.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
DSM 15981]
Length = 469
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
LR ++ M DD NT+ ++ F + +K N++ S + +++ ++ + D
Sbjct: 354 LRGKYEAAMDDDFNTADAISAVF-ELVKLANSTADAD-----STARYVSYLKDMIQELCD 407
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
VLG++ E ++AE ++ V LI R A+K K+F+ +D+IR L
Sbjct: 408 VLGIITE----------------RKAETLDSQVEELIAARQQARKEKNFALADEIRGRLL 451
Query: 192 RKGIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 452 DMGIVLEDTREGVKWK 467
>gi|254480424|ref|ZP_05093671.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
gi|214039007|gb|EEB79667.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
Length = 458
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 72 LRDE-FYTRMSDDLNTSHILTGAFLDAL-KFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
L DE FY ++DDLNT L A L AL K +N + + K Q L ++ N +
Sbjct: 337 LADEPFYQALNDDLNTP--LAIAELHALAKQLNKAAAEDKPQ---LKARIIAAGN----L 387
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L +LG PE E LQ AE E LI+ER AK N++F+++D+IR
Sbjct: 388 LGILGQDPE-----EWLQGDAAADAISAEAIET----LIQERVDAKANRNFARADEIRDS 438
Query: 190 LTRKGIALMDVRKETIWR 207
L +G+ L D R+ T W+
Sbjct: 439 LLAEGVVLEDSREGTQWK 456
>gi|451819341|ref|YP_007455542.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785320|gb|AGF56288.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 470
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 31/144 (21%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALK--FI-NNSKKQPKQQQLSLIESLLKIE 123
D + K + +F ++DDLN ++ T + +K +I NN KKQ LIE +I
Sbjct: 353 DAVNKYKSDFKECINDDLNIANAFT-VLYEVIKDNYISNNEKKQ-------LIEDFDRIF 404
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
+ L L+ E +L ++ +K E LI ERA A+ NK+++KS
Sbjct: 405 S--------LNLIQEQGN-----NKLNEERIKYIE-------GLINERAQARVNKEWNKS 444
Query: 184 DQIRADLTRKGIALMDVRKETIWR 207
D+IR L ++GI + D ++ T+W+
Sbjct: 445 DKIREALLQEGIEITDTKEGTVWK 468
>gi|347948730|pdb|3TQO|A Chain A, Structure Of The Cysteinyl-Trna Synthetase (Cyss) From
Coxiella Burnetii
Length = 462
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
D FY DD NT I + ++ IN + + IE + E+K + ++
Sbjct: 342 DRFYEAXDDDFNTP-IAFALLFEXVREINRFRDNNQ------IEKAAVLAAELKCLGNIF 394
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GLL YS +Q A K A++ E + LI++R A+ KD+ +DQIR LT
Sbjct: 395 GLL----QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDL 446
Query: 194 GIALMDVRKETIWR 207
G+A+ D T WR
Sbjct: 447 GVAIEDSSDGTSWR 460
>gi|257875920|ref|ZP_05655573.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
gi|257810086|gb|EEV38906.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
Length = 470
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
+++ + F M DD N ++ +T + + K++N + + P+ L L K
Sbjct: 350 VLEEFEERFVKEMDDDFNAANGITVVY-ELAKWLNLASEDPETDLALLAAGLAKFSE--- 405
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
L + G+ EL + ++ LI ER A+K KDF++SDQIR
Sbjct: 406 -WLTIFGIY-----------------FVSEELLDEEIEQLINERIAARKAKDFARSDQIR 447
Query: 188 ADLTRKGIALMDVRKETIWR 207
+L +GI L D + T WR
Sbjct: 448 DELKEQGIILEDTPQGTRWR 467
>gi|225867828|ref|YP_002743776.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
gi|225701104|emb|CAW97948.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPK-----QQQLSLIESLLK--------IENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP QL+ + K N + V+ D+ + G+ YSE
Sbjct: 318 LKYLKNTLQQPTVATADASQLNAFITAFKAAMNDDFNTANGITVLFDMAKWINSGA-YSE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
++ ++ L AE + ++ LI ER A+ N+DF+K+D IR L +GI L+
Sbjct: 377 AVKSAFEEMLAVFGIVFEAESLDTEIEQLIAERQEARANRDFAKADAIRDQLAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|259502662|ref|ZP_05745564.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
gi|259169307|gb|EEW53802.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
Length = 471
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 22/113 (19%)
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSE-------VLQQLKDK------------AL 154
++++ + ++N + VV + L+ +TY++ LQ KDK
Sbjct: 359 AVMDDDINVQNGIAVVYE---LVKAANTYAQQPVVKQGALQAYKDKLAQLVSIFGIKLVA 415
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ ++ + + LIEER A+KNKDF++SDQIR +L ++GI L D + T ++
Sbjct: 416 RDNQIDDEQIKALIEERNQARKNKDFARSDQIRDELKQRGIILEDTPQGTRYK 468
>gi|419706820|ref|ZP_14234329.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
gi|383283455|gb|EIC81410.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDC-IKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
+ D EV L + ++ S +T + ++ D F M DD NT++ +T F D K+
Sbjct: 311 IHDAEVNLK-YLKNTHSLPLTDQVDQAELQTYLDAFQEAMDDDFNTANGVTVLF-DMAKW 368
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN+ +++ + +L V G++ + E+
Sbjct: 369 INSGHYDQ------------TVKDAFEKMLQVFGIVF------------------KEEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ D+ LIEER A+ NKDF +D+IR +L +GI L+D + W
Sbjct: 399 DEDIEKLIEERQAARANKDFVTADRIRDELAAQGIKLLDTKDGVRW 444
>gi|330810612|ref|YP_004355074.1| cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423698259|ref|ZP_17672749.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388005576|gb|EIK66843.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
Length = 460
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK 70
P VR LL+ + + S Y+ + L+D + AL F + PAA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVPAAGG--E 335
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
F M+DD T + ++ IN + ++ L+ L E+ VL
Sbjct: 336 AFVARFTEVMNDDFGTPEACA-VLFEMVREIN----RLRESDLNAAAGLAARLKELASVL 390
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VL L E L+ A R + AE V LI+ R TA+ NKD+++SD+IR L
Sbjct: 391 GVLQL--------EADDFLQAGAEGRVDAAE--VEALIQARLTARANKDWAESDRIRDQL 440
Query: 191 TRKGIALMDVRKETIWR 207
T G+ L D + T WR
Sbjct: 441 TAMGVVLEDGKGGTTWR 457
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
Query: 53 QEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQ 112
Q + S + I++L+ +F M DDLNT+ TG + ++ IN ++
Sbjct: 329 QNETSSSENNDKLKTVIEQLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANFCSKET 387
Query: 113 LSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
L+ + +LK + +LG+L + S+ E + Q ++L ++E+R
Sbjct: 388 LTFAKDVLK------ELCSILGILEQYSSKEEYVPQ--------------EILDMVEKRN 427
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKET 204
A+K K+F+++D+IR +L G ++D + T
Sbjct: 428 QARKLKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
L C AL ++ R TPA + +++F M DDLNT+ L F + +K I
Sbjct: 319 LYRCREAL---KDALRQAGETPADSAAVSAWQEKFDAAMDDDLNTADALAVLF-ELVKEI 374
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAE 161
N + + + L DVLGLL E K++ L AE
Sbjct: 375 NTRV----AEGTAGADWLKGAAGLFGTFCDVLGLLYE----------RKERTLD----AE 416
Query: 162 NDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+VL IE+R A+K KDF +D IR +L+ KGI L D + W
Sbjct: 417 VEVL--IEKRRQARKAKDFKTADAIRDELSAKGIVLKDTPQGVKW 459
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
SG I+ +++ R++F M DDLNT+ + GA ++ N+ L +
Sbjct: 335 SGGISEELRSAVRESREQFLNAMDDDLNTAEAI-GAVFALIRSANSHIGSQSPLDLEALN 393
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+ +V ++ ++G+ + A+ ++++ LI R A+K
Sbjct: 394 EAARFLQDVDRIMGIIGI-------------------ENAQALDHEIEELIHRRNQARKE 434
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++F ++D IR L GI L D + T W+
Sbjct: 435 RNFKEADAIRDKLLSMGIVLEDTPQGTRWK 464
>gi|339637566|emb|CCC16502.1| cysteinyl-tRNA synthetase [Lactobacillus pentosus IG1]
Length = 471
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 23/141 (16%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAF-LDALKFINNSKKQPKQQQLS-LIESLLKIENEV 126
+K L D F T M DD N + + + L L + +K + L+ L E+L +
Sbjct: 350 LKTLTDNFVTAMDDDFNVQNGVAAVYELAKLANVYAAKTTVQSDTLTALSETLEALAGVF 409
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
V L A A LA++ + LI+ER A++ KDF+K+DQI
Sbjct: 410 GVTL---------------------AAPANASLADDAIQALIDEREAARQAKDFAKADQI 448
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL +GI L D + +R
Sbjct: 449 RDDLKAQGIILEDTPQGVRFR 469
>gi|456013245|gb|EMF46904.1| Cysteinyl-tRNA synthetase [Planococcus halocryophilus Or1]
Length = 467
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I++++ F M DD NT++ ++ F L ++N+ KQ +++E+ + + +E+
Sbjct: 347 IEEIKTAFIETMDDDFNTANAISSLF--DLSRLSNTYLLEKQTATAVLETFIAVFDELAS 404
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L LP ++ EL + +V L+ ER A+KN+DF+++D+IR
Sbjct: 405 ILG----LPFN---------------QQEELLDEEVEALMAERIEARKNRDFARADEIRD 445
Query: 189 DLTRKGIALMDVRKETIWR 207
+ I L D + T W+
Sbjct: 446 LFKEQNIILEDTAQGTRWK 464
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 22/141 (15%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D ++K ++++ +M DD NT+ ++ F D ++ +N + + IE+
Sbjct: 345 DELQKYKEKYIEKMDDDFNTADAISVIF-DLIRDVNTN---------------ITIESSK 388
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++V L L+ E + +LQ+ +L E ++ LI+ER A+K KD++ +D+I
Sbjct: 389 ELVKYALDLIRELGSPLGILQKSTKASL------EEEIERLIQERQKARKEKDWALADKI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL +GI L D + W+
Sbjct: 443 RDDLKERGIVLEDTPQGVRWK 463
>gi|421716981|ref|ZP_16156289.1| cysteine--tRNA ligase [Helicobacter pylori R037c]
gi|407219556|gb|EKE89371.1| cysteine--tRNA ligase [Helicobacter pylori R037c]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 AQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|259511840|sp|C3JYD3.1|SYC_PSEFS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 462
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARS-GSITPAAEDCI 69
P VR LL+ + + S Y+ + L+D + AL F + S+ PA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVAPAGGEAF 337
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
F M+DD T + ++ IN ++ L L E+ V
Sbjct: 338 VA---RFTEVMNDDFGTPEACA-VLFEMVREINRLRESDLDAAAGLAARL----KELASV 389
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L VL + PE L+ A R + AE D L I+ R A+ NKD+++SD+IR
Sbjct: 390 LGVLQMKPE--------DFLQAGAEGRVDAAEVDAL--IQARLAARANKDWAESDRIRDQ 439
Query: 190 LTRKGIALMDVRKETIWR 207
LT G+ L D + T WR
Sbjct: 440 LTAMGVVLEDGKGGTTWR 457
>gi|377832153|ref|ZP_09815117.1| cysteinyl-tRNA synthetase [Lactobacillus mucosae LM1]
gi|377554160|gb|EHT15875.1| cysteinyl-tRNA synthetase [Lactobacillus mucosae LM1]
Length = 470
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 21/159 (13%)
Query: 49 LSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQP 108
L+ Q DA++G+ A+ + +F T M DD+N + + + + +K+ N ++P
Sbjct: 331 LTYRQRDAQNGNDDEVAQR-VAAFTQQFITAMDDDINVQNGIATVY-ELVKYANVYAQKP 388
Query: 109 KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
+ E+L ++ E++ +L + G+ E S ++ D+A+K LI
Sbjct: 389 ----VVKAEALKTLKQELEALLGIFGVRLETSNC-----EIDDQAIK----------DLI 429
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+R A+ K+F+ SDQIR +L +GI L D + T +R
Sbjct: 430 SKRNQARAAKNFALSDQIRDELKAQGIILEDTPQGTRYR 468
>gi|322688493|ref|YP_004208227.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
157F]
gi|320459829|dbj|BAJ70449.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
157F]
Length = 549
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 410 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 464
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P + A AE E+ L LI E RA A+K KDF+K+
Sbjct: 465 MLDTLGLDPLAEPWVSAGAAGG-AADGTAESPEHAALEALIAEQLNARAEARKAKDFAKA 523
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 524 DQIRDALTEAGIAIEDGPQGSTW 546
>gi|422824397|ref|ZP_16872584.1| cysteine--tRNA ligase [Streptococcus sanguinis SK405]
gi|422857608|ref|ZP_16904258.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1057]
gi|324992446|gb|EGC24367.1| cysteine--tRNA ligase [Streptococcus sanguinis SK405]
gi|327462791|gb|EGF09113.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP--KQQQLSLIESLL-----------KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + + +++ L N + VV ++ + G+ SE
Sbjct: 318 LKYLKNTYEQPFTGQAESAQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTSE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKAAFAKLLEVFGIVFVEEVLDADIERLIEERQAARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 80 MSDDLNTSHILTGAFLDALKFIN----NSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
M+DD+NT+ L F+ +K +N + + +Q +I LK+ VL + L
Sbjct: 358 MADDMNTAAALGHVFV-LMKIVNRILEDKTLKKSEQGRDMIRHALKLFERWGEVLGLF-L 415
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
+P S+ L QLK+ + R ++ + V ++ER A+ KDF++SD IR +L G+
Sbjct: 416 MPS----SDFLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRDELLALGV 471
Query: 196 ALMDVRKETIW 206
+ D + W
Sbjct: 472 TIQDTAQGVQW 482
>gi|15675744|ref|NP_269918.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes SF370]
gi|71911468|ref|YP_283018.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|410681316|ref|YP_006933718.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes A20]
gi|21264023|sp|Q99XZ9.1|SYC_STRP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|13622964|gb|AAK34639.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
gi|71854250|gb|AAZ52273.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|395453282|dbj|BAM29621.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 476]
gi|409693905|gb|AFV38765.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes A20]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
T+ D E+ L + + A E +K+ F M DD NT++ +T F D K+
Sbjct: 310 TIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAFQDAMDDDFNTANGITVVF-DMAKW 368
Query: 101 INN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAEL 159
IN+ S +P +++ + +L V G++ E E+
Sbjct: 369 INSGSYTEP-------------VKSAFEKMLAVFGIIFE------------------EEV 397
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E D+ LI +R A+ N+DF+ +D IR L +GI L+D + W
Sbjct: 398 LEVDIEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKDGVRW 444
>gi|421713734|ref|ZP_16153062.1| cysteine--tRNA ligase [Helicobacter pylori R32b]
gi|407214484|gb|EKE84331.1| cysteine--tRNA ligase [Helicobacter pylori R32b]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADNIREELLQQKIALMDTPQGTIW 461
>gi|225871262|ref|YP_002747209.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
gi|225700666|emb|CAW95246.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPK-----QQQLSLIESLLK--------IENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP QL+ + K N + V+ D+ + G+ YSE
Sbjct: 318 LKYLKNTLQQPTVATADASQLAAFITAFKAAMNDDFNTANGITVLFDMAKWINSGA-YSE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
++ ++ L AE + ++ LI ER A+ N+DF+++D IR L +GI L+
Sbjct: 377 AVKSAFEEMLAVFGIVFEAESLDTEIEQLIAERQEARANRDFARADAIRDQLAAQGIKLL 436
Query: 199 DVRKETIW 206
D ++ W
Sbjct: 437 DTKEGVRW 444
>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|123050340|sp|Q0VML5.1|SYC_ALCBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
Length = 460
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
++K + L+ + + L+EER AKK+K+F+++D+IR LT+ GI L D R+ T W
Sbjct: 401 FQNKNVSEDGLSNDAIDALVEERTQAKKDKNFARADEIRQQLTKAGIQLEDTREGTRW 458
>gi|170783050|ref|YP_001711384.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189082062|sp|B0RAX1.1|SYC_CLAMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169157620|emb|CAQ02818.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 484
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 63 PAAEDCI-KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLK 121
PAA D + DEF M DDL+ L DA++ N + Q+ +
Sbjct: 348 PAATDGAPAAVPDEFAEAMDDDLSVPQALA-VLHDAVRAGNAALDAGDLQEAA------S 400
Query: 122 IENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFS 181
+ +V ++ VLG+ P + Q +AL+ V H I ER TA++ +DF+
Sbjct: 401 LRADVSAMVAVLGIDPLADEWRTASDQPARRALQAL------VEHRIAERQTAREARDFA 454
Query: 182 KSDQIRADLTRKGIALMDVRKETIW 206
+D+IR +L GI + D + W
Sbjct: 455 LADRIRQELAEAGITIEDSPGGSHW 479
>gi|315612689|ref|ZP_07887601.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
gi|315315276|gb|EFU63316.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFTGNVDTQELQAFKDKFVAAMDEDFNSANGITVVFEMAKWINSGNYDAS 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + D+ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEVFGIVFVEEVLDADIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 18 LLDIFWLNELFASIPQYTGNETITLQDCEVALS---PFQEDARSGSITP--AAEDCIKKL 72
++ +F L++ + S Y+ N ++++ VAL F E ITP AA L
Sbjct: 289 VIRMFLLSKHYRSPIDYSEN---SMREVSVALDRIYGFLERLDKAGITPPDAAGGEHGPL 345
Query: 73 RDEFYTRMSDDLNTSHILTGAFLDALK----FINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ ++DD N++ + F DA+K ++++ P + + L I +++
Sbjct: 346 WADIVEALNDDFNSAKAMAEIF-DAVKKGNKLLDDANDAPGESDRKV---LAGIYADIRS 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
++LG+ + ++ KD+A+ ++ + LI ERA A+K+K+F+++D+IR
Sbjct: 402 ASEILGIFMICA--ADYFAAKKDRAMADQDVDSAMIDALIVERANARKSKNFARADEIRD 459
Query: 189 DLTRKGIALMDVRKETIWR 207
L I L D + T WR
Sbjct: 460 QLQAMKIVLEDGPQGTTWR 478
>gi|46190761|ref|ZP_00121063.2| COG0215: Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|189439911|ref|YP_001954992.1| cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|227545810|ref|ZP_03975859.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum ATCC
55813]
gi|312133327|ref|YP_004000666.1| cyss [Bifidobacterium longum subsp. longum BBMN68]
gi|317482007|ref|ZP_07941032.1| tRNA synthetase class I catalytic domain-containing protein
[Bifidobacterium sp. 12_1_47BFAA]
gi|322690503|ref|YP_004220073.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
1217]
gi|384202156|ref|YP_005587903.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
KACC 91563]
gi|419847580|ref|ZP_14370747.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|419851298|ref|ZP_14374247.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
gi|419853163|ref|ZP_14375999.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|419854040|ref|ZP_14376832.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
gi|189428346|gb|ACD98494.1| Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|227213926|gb|EEI81765.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|291517397|emb|CBK71013.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
gi|311772544|gb|ADQ02032.1| CysS [Bifidobacterium longum subsp. longum BBMN68]
gi|316916574|gb|EFV37971.1| tRNA synthetase class I catalytic domain-containing protein
[Bifidobacterium sp. 12_1_47BFAA]
gi|320455359|dbj|BAJ65981.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
1217]
gi|338755163|gb|AEI98152.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum KACC
91563]
gi|386406554|gb|EIJ21556.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
gi|386408729|gb|EIJ23622.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|386410576|gb|EIJ25354.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|386418110|gb|EIJ32577.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
Length = 549
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 410 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 464
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P + A AE E+ L LI E RA A+K KDF+K+
Sbjct: 465 MLDTLGLDPLAEPWVSAGAAGG-AADGTAESPEHAALEALIAEQLNARAEARKAKDFAKA 523
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 524 DQIRDALTEAGIAIEDGPQGSTW 546
>gi|422847554|ref|ZP_16894237.1| cysteine--tRNA ligase [Streptococcus sanguinis SK72]
gi|325686898|gb|EGD28923.1| cysteine--tRNA ligase [Streptococcus sanguinis SK72]
Length = 450
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q + ++ N + VV ++ + G+ +E
Sbjct: 321 LKYLKNTYDQPFTGQADSAQFQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 380
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V L + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 381 VKAALAELLEVFGIVFVEEVLDADIERLIEERQVARANRDFATADRIRDELAAQGIKLLD 440
Query: 200 VRKETIW 206
+ W
Sbjct: 441 TKDGVRW 447
>gi|407462606|ref|YP_006773923.1| cysteinyl-tRNA synthetase [Candidatus Nitrosopumilus koreensis AR1]
gi|407046228|gb|AFS80981.1| cysteinyl-tRNA synthetase [Candidatus Nitrosopumilus koreensis AR1]
Length = 486
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+ IKKL EF + DD NT H+ AF +K N + K + E KI+ E
Sbjct: 333 DSTIKKLGLEFDKALEDDFNT-HLALSAFFQLVKETNRLAAEEKLGK----EDARKIKPE 387
Query: 126 VKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
+ +L +LGL +PE + E + ++ ++IE+R ++ K F K+D
Sbjct: 388 FQRMLKILGLNIPEIT-----------------EETKQEIDNMIEDREKFRQEKQFQKAD 430
Query: 185 QIRADLTRKGIALMDVRKETIW 206
QIR L + L+D + +TIW
Sbjct: 431 QIRDRLNEMDVELIDHKGKTIW 452
>gi|398857260|ref|ZP_10612961.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
gi|398241109|gb|EJN26768.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
Length = 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARS-GSITPAAEDCI 69
P VR LL+ + + S Y+ + L+D + AL F + S+ PA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVAPAGGEA- 336
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
+ F M+DD T + ++ IN ++ L L E+ V
Sbjct: 337 --FVERFTQVMNDDFGTPEACA-VLFEMVREINRLRESDLDAAAGLAARL----KELASV 389
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L VL L E L+ A R + AE D L I+ R TA+ NKD+++SD+IR
Sbjct: 390 LGVLQL--------EADDFLQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQ 439
Query: 190 LTRKGIALMDVRKETIWR 207
LT G+ L D + T WR
Sbjct: 440 LTAMGVVLEDGKGGTTWR 457
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
L D ++AL+ R + A D + F M DD NT + D +
Sbjct: 319 LDDAKLALTRLYTSLRGHVVADVAIDWQQPHSARFKEAMDDDFNTPEAMA-VLFDLANEV 377
Query: 102 NNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL---PEGSTYSEVLQQLKDKALKRAE 158
N +K L++ +K + VLGLL + +V QL LK
Sbjct: 378 NKTKS-------------LEVAALLKSLAGVLGLLQRDADAFLQGDVAAQLAGTELKI-- 422
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
D+ L+ +R AKK K+F+++D+IR +L GI L D T WR
Sbjct: 423 ----DIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLEDTALGTTWR 467
>gi|217032936|ref|ZP_03438411.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
gi|216945346|gb|EEC24018.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
Length = 462
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 331 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 380
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 381 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 427
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF K+D IR +L ++ IALMD + TIW
Sbjct: 428 AQKDFLKADHIREELLKQKIALMDTPQGTIW 458
>gi|365121761|ref|ZP_09338675.1| cysteinyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
gi|363644362|gb|EHL83649.1| cysteinyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
Length = 492
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 61 ITPAAEDC--IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSL 115
I P + IK LR++ Y M+DDL +S I+ DA++ IN + K + L
Sbjct: 354 IIPGTDSTVDIKNLREKCYEAMNDDL-SSPIVISYLFDAVRIINTILSGKASINETDLEE 412
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
++ + + + D+LGL E ST + +KA+ L++ R AK
Sbjct: 413 LKEIFQT-----FMFDILGLKVENSTTGNASNEAYEKAVDL----------LLDVRQEAK 457
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+KD+ +D IR L+ G + D + W+
Sbjct: 458 NHKDWQTADFIRNKLSEIGFEIKDTKDGAEWK 489
>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 466
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M+DD NT L + D ++ +NN+ K + +E ++ E+K + +LG+
Sbjct: 347 FVAAMNDDFNTRVALASMY-DLVRELNNAGK-------TDVERAQRLAGELKALGLILGI 398
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L E V Q ++A +V L+ ER AKK K+++++D++R L GI
Sbjct: 399 LQENP---RVFLQTGTSG----QIAAEEVDRLVAERIQAKKEKNYARADEVRKQLADNGI 451
Query: 196 ALMDVRKETI-WR 207
+ D + T WR
Sbjct: 452 LIEDAKDGTTQWR 464
>gi|340351560|ref|ZP_08674472.1| cysteine--tRNA ligase [Prevotella pallens ATCC 700821]
gi|339617844|gb|EGQ22457.1| cysteine--tRNA ligase [Prevotella pallens ATCC 700821]
Length = 495
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENE 125
+ LR + Y M+DDL T +++ F +A +N + K Q ++ L + + +
Sbjct: 367 VSTLRQKCYDAMNDDLMTPAVISNLF-EACHIVNLLIDHKAQISEEDLKELSETMHL--- 422
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
D+LGL+ E ++ + K + +++ RA AK NKD++ SDQ
Sbjct: 423 --FAFDILGLVNERGANNDAREAAYGKVVDM----------VLDLRAKAKANKDWAVSDQ 470
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L G + D + W+
Sbjct: 471 IRNALAEAGFQVKDTKDGVTWK 492
>gi|126696668|ref|YP_001091554.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|187629842|sp|A3PDX8.1|SYC_PROM0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126543711|gb|ABO17953.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 489
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 SEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRK 202
+EVL K+ +K +++ E ++ LI ER AKK K+++K+D+IR+ L KGI L+D K
Sbjct: 422 TEVLGLKKEVLVKESKITEEEISTLINERLKAKKEKNYAKADEIRSLLKEKGIELIDQSK 481
Query: 203 E-TIW 206
E T W
Sbjct: 482 EITTW 486
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 60 SITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESL 119
S+ PA + KK F M+DD NT + F D + IN K + K L L
Sbjct: 329 SVAPAGGEIFKK---RFEDAMNDDFNTPEAYSVLF-DMAREINRLKSENKVAANELASEL 384
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKD 179
K+ VLGLL + E Q + E+A+ + LI++R A+KNK+
Sbjct: 385 RKLAG-------VLGLLEQDP---EAFLQGNAQGEGDEEVAK--IEALIKQRNDARKNKE 432
Query: 180 FSKSDQIRADLTRKGIALMDVRKETIWR 207
++ +D R +LT GI L D + T WR
Sbjct: 433 WALADAARDELTAMGIVLEDGAQGTTWR 460
>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
Length = 449
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + N++ + ++ S +IE+ +K ++
Sbjct: 331 MEKFQVAFEEAMDDDFNTANAITELY----NVANHANQYLLEEHTSKVVIEAYVK---QL 383
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 384 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 426
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 427 RDDLKGRNIILEDTAQGTRWK 447
>gi|15645504|ref|NP_207679.1| cysteinyl-tRNA synthetase [Helicobacter pylori 26695]
gi|410024113|ref|YP_006893366.1| cysteinyl-tRNA ligase [Helicobacter pylori Rif1]
gi|410501880|ref|YP_006936407.1| cysteinyl-tRNA ligase [Helicobacter pylori Rif2]
gi|410682399|ref|YP_006934801.1| cysteinyl-tRNA ligase [Helicobacter pylori 26695]
gi|419417547|ref|ZP_13957975.1| cysteinyl-tRNA synthetase [Helicobacter pylori P79]
gi|2507427|sp|P41259.2|SYC_HELPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2314022|gb|AAD07934.1| cysteinyl-tRNA synthetase (cysS) [Helicobacter pylori 26695]
gi|384372785|gb|EIE28349.1| cysteinyl-tRNA synthetase [Helicobacter pylori P79]
gi|409894040|gb|AFV42098.1| cysteinyl-tRNA ligase [Helicobacter pylori 26695]
gi|409895770|gb|AFV43692.1| cysteinyl-tRNA ligase [Helicobacter pylori Rif1]
gi|409897431|gb|AFV45285.1| cysteinyl-tRNA ligase [Helicobacter pylori Rif2]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 ERKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|420506714|ref|ZP_15005229.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-74]
gi|393116219|gb|EJC16729.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-74]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIESLLKIENEVKVVLDVLGL-L 136
M DDLN S L+ L+++ N K + PK + L +I +K V ++LG+
Sbjct: 348 MQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG-----EILANLKFVEELLGIGF 400
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
+ S Y + L +E + ++ + IEER AK+ KDF K+D IR +L ++ IA
Sbjct: 401 KDPSAYFQ---------LGVSESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIA 451
Query: 197 LMDVRKETIW 206
LMD + TIW
Sbjct: 452 LMDTPQGTIW 461
>gi|307274057|ref|ZP_07555267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|306509365|gb|EFM78425.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
Length = 478
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ +L F T M DD N ++ +T + + K +N +Q + V V
Sbjct: 359 LNELEQRFITEMDDDFNAANGITVVY-ELAKMMNQYSEQAT------------VSEPVLV 405
Query: 129 VLDVL--GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+D L G L + K EL + V LIEER A+K++DF++SD+I
Sbjct: 406 AMDKLFSGWLAIFCLF-----------FKNEELVDAQVDALIEERNQARKDRDFARSDEI 454
Query: 187 RADLTRKGIALMDVRKETIWR 207
R L +GI L D + T WR
Sbjct: 455 RDLLKEQGIVLEDTPQGTRWR 475
>gi|299147030|ref|ZP_07040097.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
gi|298514915|gb|EFI38797.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
Length = 493
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA+ +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPASATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|288904445|ref|YP_003429666.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325977441|ref|YP_004287157.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386336955|ref|YP_006033124.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288731170|emb|CBI12718.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325177369|emb|CBZ47413.1| cysS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334279591|dbj|BAK27165.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 448
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K + +F M DD NT++ +T F D K+IN+ +++
Sbjct: 339 LAKFKADFEAAMDDDFNTANGITVIF-DMAKWINSGNYNQ------------AVKDTFAK 385
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L V G++ E E+ + D+ LIE+R A+ NKDF+ +D IR
Sbjct: 386 MLAVFGIVFE------------------EEVLDADIEALIEKRQAARANKDFATADAIRD 427
Query: 189 DLTRKGIALMDVRKETIW 206
L +GI L+D + W
Sbjct: 428 QLAAQGIKLLDTKDGVRW 445
>gi|306832715|ref|ZP_07465852.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
gi|336063573|ref|YP_004558432.1| cysteinyl-tRNA synthetase [Streptococcus pasteurianus ATCC 43144]
gi|304425171|gb|EFM28300.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
gi|334281773|dbj|BAK29346.1| cysteinyl-tRNA synthetase [Streptococcus pasteurianus ATCC 43144]
Length = 448
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K + +F M DD NT++ +T F D K+IN+ +++
Sbjct: 339 LAKFKADFEAAMDDDFNTANGITVIF-DMAKWINSGNYNQ------------AVKDTFAK 385
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L V G++ E E+ + D+ LIE+R A+ NKDF+ +D IR
Sbjct: 386 MLAVFGIVFE------------------EEVLDADIEALIEKRQAARANKDFATADAIRD 427
Query: 189 DLTRKGIALMDVRKETIW 206
L +GI L+D + W
Sbjct: 428 QLAAQGIKLLDTKDGVRW 445
>gi|239622493|ref|ZP_04665524.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239514490|gb|EEQ54357.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 536
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 397 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 451
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P + A AE E+ L LI E RA A+K KDF+K+
Sbjct: 452 MLDTLGLDPLAEPWVSAGVAGG-AADGTAESPEHAALEALIAEQLNARAEARKAKDFAKA 510
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 511 DQIRDALTEAGIAIEDGPQGSTW 533
>gi|421719523|ref|ZP_16158807.1| cysteine--tRNA ligase [Helicobacter pylori R046Wa]
gi|407220846|gb|EKE90651.1| cysteine--tRNA ligase [Helicobacter pylori R046Wa]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKNPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|423094541|ref|ZP_17082337.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397886248|gb|EJL02731.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK 70
P VR LL+ + + S Y+ + L+D + AL F + P A +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPAVPPAGG--E 335
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
F M+DD T + ++ IN + ++ L+ L E+ VL
Sbjct: 336 GFVARFTEVMNDDFGTPEACA-VLFEMVREIN----RLRESDLNAAAGLAARLKELASVL 390
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VL L E L+ A R + AE D L I+ R TA+ NKD+++SD+IR L
Sbjct: 391 GVLQL--------EADDFLQAGAEGRVDAAEVDAL--IQARLTARTNKDWAESDRIRDQL 440
Query: 191 TRKGIALMDVRKETIWR 207
T G+ L D + T WR
Sbjct: 441 TAMGVVLEDGKGGTTWR 457
>gi|306830478|ref|ZP_07463648.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427503|gb|EFM30605.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 448
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K + +F M DD NT++ +T F D K+IN+ +++
Sbjct: 339 LAKFKADFEAAMDDDFNTANGITVIF-DMAKWINSGNYNQ------------AVKDTFAK 385
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L V G++ E E+ + D+ LIE+R A+ NKDF+ +D IR
Sbjct: 386 MLAVFGIVFE------------------EEVLDADIEALIEKRQAARANKDFATADAIRD 427
Query: 189 DLTRKGIALMDVRKETIW 206
L +GI L+D + W
Sbjct: 428 QLAAQGIKLLDTKDGVRW 445
>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|423370672|ref|ZP_17348077.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|423473115|ref|ZP_17449857.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|423485389|ref|ZP_17462071.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423491114|ref|ZP_17467758.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|423502090|ref|ZP_17478707.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|423514646|ref|ZP_17491153.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423514942|ref|ZP_17491423.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423602381|ref|ZP_17578381.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|423665397|ref|ZP_17640536.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423672657|ref|ZP_17647596.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|229558616|sp|A9VNA2.1|SYC_BACWK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|401073408|gb|EJP81830.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|401151484|gb|EJQ58935.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|401162039|gb|EJQ69398.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|401168443|gb|EJQ75706.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401225920|gb|EJR32464.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|401290304|gb|EJR95999.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311517|gb|EJS16812.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402426613|gb|EJV58734.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|402441580|gb|EJV73530.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402442046|gb|EJV73990.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 400 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKGRNIILEDTAQGTRWK 463
>gi|423556914|ref|ZP_17533217.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
gi|401194229|gb|EJR01221.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 400 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKGRNIILEDTAQGTRWK 463
>gi|423456289|ref|ZP_17433142.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|401130888|gb|EJQ38543.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 400 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKGRNIILEDTAQGTRWK 463
>gi|352516198|ref|YP_004885515.1| cysteinyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
gi|348600305|dbj|BAK93351.1| cysteinyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
Length = 469
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 23/142 (16%)
Query: 66 EDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+D K+L D+F M DD N ++ +T + + K++N + +Q +S E L +
Sbjct: 348 KDEFKQLIDQFIIEMDDDFNAANGITVVY-EMAKWMN---RYIEQNTVSY-EVLKYALDH 402
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+L + G+ E ++L DK +++ LI ER A+KNK+F +SD+
Sbjct: 403 FIEILTIFGV--------EFEEKLADKQVEQ----------LILERDEARKNKEFIRSDE 444
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L +GI L D + T WR
Sbjct: 445 IRDQLKEQGIVLEDTPQGTRWR 466
>gi|302024504|ref|ZP_07249715.1| cysteinyl-tRNA synthetase [Streptococcus suis 05HAS68]
gi|330833540|ref|YP_004402365.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
gi|329307763|gb|AEB82179.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L+ E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLEVFGIVFEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|298736162|ref|YP_003728688.1| cysteinyl-tRNA synthetase [Helicobacter pylori B8]
gi|298355352|emb|CBI66224.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 AQKDFLKADHIREELLKQKIALMDTPQGTIW 461
>gi|399003440|ref|ZP_10706104.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM18]
gi|398122919|gb|EJM12500.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM18]
Length = 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARS-GSITPAAEDCI 69
P VR LL+ + + S Y+ + L+D + AL F + S+ PA +
Sbjct: 286 PEVVRYLLV-----SSHYRSAINYSED---NLKDAKGALERFYHALKGLPSVAPAGGEAF 337
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVV 129
+ F M+DD T + ++ IN ++ L L E+ V
Sbjct: 338 V---ERFTQVMNDDFGTPEACA-VLFEMVREINRLRESDLDAAAGLAARL----KELASV 389
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L VL L E L+ A R + AE D L I+ R TA+ NKD+++SD+IR
Sbjct: 390 LGVLQL--------EADDFLQAGAEGRVDAAEVDAL--IQARLTARANKDWAESDRIRDQ 439
Query: 190 LTRKGIALMDVRKETIWR 207
LT G+ L D + T WR
Sbjct: 440 LTAMGVVLEDGKGGTTWR 457
>gi|223933939|ref|ZP_03625899.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
gi|223897386|gb|EEF63787.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L+ E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLEVFGIVFEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|406669677|ref|ZP_11076943.1| cysteine-tRNA ligase [Facklamia ignava CCUG 37419]
gi|405582798|gb|EKB56788.1| cysteine-tRNA ligase [Facklamia ignava CCUG 37419]
Length = 473
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLK-IENE 125
D + +L +F T M DD N ++ LT A +K IN+ Q + + E++L+ ++ +
Sbjct: 352 DRLNQLEVQFVTGMDDDFNVANGLT-AVSSLVKTINHYLTQEE-----VSEAVLQPMQEQ 405
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
+ L++ G++ L E + ++ LIEER A+K+++F+++D+
Sbjct: 406 LTRWLEIFGII-----------------LTEDEAIDQEIEALIEERNQARKDRNFARADE 448
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L +GI L D + T W+
Sbjct: 449 IRDLLKAQGIKLDDTPQGTTWK 470
>gi|420426879|ref|ZP_14925928.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-9]
gi|393043836|gb|EJB44839.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-9]
Length = 465
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + STY + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSTYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|406672886|ref|ZP_11080111.1| cysteine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
gi|405587430|gb|EKB61158.1| cysteine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
Length = 492
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 61 ITPAAEDC------IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI---NNSKKQPKQQ 111
I PAA I + +++ YT ++DD N S IL +A+K+I N ++
Sbjct: 355 IAPAANSSQPIANRIIEWKEKCYTALTDDFN-SPILISHLFEAVKWIFQWKNGDEEISID 413
Query: 112 QLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEER 171
+L+ ++SLL V DVLGL + SE L D A++ LI+ R
Sbjct: 414 ELNTLKSLLN-----GFVYDVLGLQDLEESNSEKL----DGAMRI----------LIDLR 454
Query: 172 ATAKKNKDFSKSDQIRADLTRKGIALMDVRKET 204
A+K K+F SD+IR L +GI L D R+ T
Sbjct: 455 NQARKAKNFELSDEIRDKLLSEGIELKDSREGT 487
>gi|418965883|ref|ZP_13517641.1| cysteine--tRNA ligase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383341517|gb|EID19776.1| cysteine--tRNA ligase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 423
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + ++ N + VV ++ + G+ +E
Sbjct: 294 LKYLKNTYEQPFTDQADSVQLQVLLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 353
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 354 VKEAFAKLLEVFGIVFVEEVLDADIERLIEERQVARANRDFATADRIRNELAAQGIKLLD 413
Query: 200 VRKETIW 206
+ W
Sbjct: 414 TKDGVRW 420
>gi|319939876|ref|ZP_08014231.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
gi|319810887|gb|EFW07206.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%)
Query: 98 LKFINNSKKQPKQQQLSLIE-------------SLLKIENEVKVVLDVLGLLPEG----- 139
LK++ N+ +QP + L E N + VV ++ + G
Sbjct: 318 LKYLKNTYEQPFTGTVDLTELQAFLDKFTAAMDEDFNAANGITVVFEMAKWINSGHYSQE 377
Query: 140 --STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
+ ++E+LQ + AE+ + D+ LIE+R A+ KDF+ +D+IR +L KGI L
Sbjct: 378 VKTAFAELLQVFG--IVFTAEVLDADIEALIEQRQAARVAKDFATADKIRDELAAKGIKL 435
Query: 198 MDVRKETIW 206
+D + W
Sbjct: 436 LDTKDGVRW 444
>gi|398347530|ref|ZP_10532233.1| cysteinyl-tRNA ligase [Leptospira broomii str. 5399]
Length = 470
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
KL ++ ++DDLN S L + +A++ +N +P + IE ++ V +L
Sbjct: 352 KLWEDMLDALADDLNISKFLASTY-EAVRSVNQRLDKPGLGRAE-IEDAVRFFERVDRIL 409
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VL P KR L ++++ L+++R A+KNKDF+ SD+IR L
Sbjct: 410 GVLNFDP-----------------KRESL-DSEIDELVKQRQEARKNKDFALSDKIRDQL 451
Query: 191 TRKGIALMDVRKETIWR 207
GI + D ++ WR
Sbjct: 452 NDIGIVIEDTKEGLRWR 468
>gi|415727330|ref|ZP_11471428.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
gi|388062227|gb|EIK84845.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
Length = 541
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN-EVKVVL 130
L ++F M+DD+N S A A++ N Q Q S + LL +V+ +L
Sbjct: 399 LPEDFTRAMNDDINVSGA-NAAIFTAIRQGNAILDDCAQAQNSGTQKLLYTAVLQVRAML 457
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAEND---------VLHLIEERATAKKNKDFS 181
D LGL P Y+E +K+ E+ + ++ RA A+K KDF+
Sbjct: 458 DTLGLDP----YAEPWTSNANKSSAAGANGESSKECAALDALITLQLQARADARKAKDFA 513
Query: 182 KSDQIRADLTRKGIALMDVRKETIWR 207
K+D IR L GI + D K + W
Sbjct: 514 KADAIRDALNNAGIVIEDGAKGSSWH 539
>gi|315221317|ref|ZP_07863240.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
gi|315189676|gb|EFU23368.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%)
Query: 98 LKFINNSKKQPKQQQLSLIE-------------SLLKIENEVKVVLDVLGLLPEG----- 139
LK++ N+ +QP + L E N + VV ++ + G
Sbjct: 318 LKYLKNTYEQPFTGTVDLTELQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGHYSQE 377
Query: 140 --STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
+ ++E+LQ + AE+ + D+ LIE+R A+ KDF+ +D+IR +L KGI L
Sbjct: 378 VKTAFAELLQVFG--IVFTAEVLDADIEALIEQRQAARVAKDFATADKIRDELAAKGIKL 435
Query: 198 MDVRKETIW 206
+D + W
Sbjct: 436 LDTKDGVRW 444
>gi|408372449|ref|ZP_11170149.1| cysteinyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
gi|407767424|gb|EKF75861.1| cysteinyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
Length = 461
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 159 LAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
LA +D+ L+ ER AKK+K+F+++D+IR LT GI L D R+ T W
Sbjct: 411 LANDDIDALVAERTQAKKDKNFARADEIRQQLTDAGIQLEDTREGTRW 458
>gi|349688099|ref|ZP_08899241.1| cysteinyl-tRNA synthetase [Gluconacetobacter oboediens 174Bp2]
Length = 454
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A++ + HLI ER A+K +DF+++D+IR DL +GI L D + T WR
Sbjct: 402 AKVDPTHIEHLIAERLAARKARDFARADEIRNDLAAQGIVLEDGPQGTTWR 452
>gi|188584813|ref|YP_001916358.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349500|gb|ACB83770.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 469
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 49 LSPFQEDARSGSITPAAEDC---IKKLRDEFYTRMSDDLNTSHILTGAFLDALK---FIN 102
L + E +R +T +D +K+ R EF M DD NT+ L F A + +I
Sbjct: 328 LKFYLEKSREQELTDKEQDIMEYLKQARTEFEAAMDDDFNTASALAVIFSLAKEINSYIG 387
Query: 103 NSKKQPKQQQLSLIESLLKIENEVKVVLD---VLGLLPEGSTYSEVLQQLKDKALKRAEL 159
N E+ L +N ++L+ V+GLLPE E+
Sbjct: 388 NGG-----------ENALVFKNTYDLLLEFDQVMGLLPETD-----------------EI 419
Query: 160 AENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++ I+ER A+K KDF ++D IR +L +GI L D + W+
Sbjct: 420 LPEEIEQKIQEREQARKQKDFQRADAIRDELRDRGIILEDTPEGVRWK 467
>gi|77413794|ref|ZP_00789974.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|77160156|gb|EAO71287.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 47/173 (27%)
Query: 42 LQDCEVALS--------PFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGA 93
+ D EV L P QE+A ++ +++ F M DD NT++ +T
Sbjct: 311 VHDAEVNLKYLKNTFNLPIQENAN--------DEELEQFVKAFQEAMDDDFNTANGITVI 362
Query: 94 FLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
F + K+IN+ K ++ +L E +L++ G+ V Q+
Sbjct: 363 F-EMAKWINSGHYTSKVKE-TLAE-----------LLEIFGI---------VFQE----- 395
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E+ + D+ LIE+R A+ N+DF+ +D+IR +L ++GI L+D + W
Sbjct: 396 ----EVLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRW 444
>gi|323350502|ref|ZP_08086164.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|322123184|gb|EFX94869.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + ++ N + VV ++ + G+ +E
Sbjct: 318 LKYLKNTYEQPFTGQADSAQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKEAFAELLEVFGIVFVEEVLDADIERLIEERQEARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|340350271|ref|ZP_08673267.1| cysteine--tRNA ligase [Prevotella nigrescens ATCC 33563]
gi|339608800|gb|EGQ13684.1| cysteine--tRNA ligase [Prevotella nigrescens ATCC 33563]
Length = 495
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENE 125
+ LR + Y M+DDL T +++ F +A +N + K Q ++ L + +++
Sbjct: 367 VAALRQKCYDAMNDDLMTPAVVSNLF-EACHIVNLLIDHKAQINEEDLKELSETMRL--- 422
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
D+LGL+ E ++ + K + +++ RA AK NKD++ SDQ
Sbjct: 423 --FAFDILGLVNERGANNDAREAAYGKVVDM----------VLDLRAKAKANKDWAVSDQ 470
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L G + D + W+
Sbjct: 471 IRDALAEAGFQVKDTKDGVTWK 492
>gi|257457848|ref|ZP_05623007.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
gi|257444561|gb|EEV19645.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
Length = 487
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+ ER AKKNKDF ++D+IR L +GIAL D T+WR
Sbjct: 445 LVAERTEAKKNKDFKRADEIRNILKNRGIALEDTATGTLWR 485
>gi|207092910|ref|ZP_03240697.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
Length = 332
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 201 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKTLKG- 250
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 251 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 297
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
KDF K+D+IR +L ++ IALMD + TIW
Sbjct: 298 VQKDFLKADRIREELLKQKIALMDTPQGTIW 328
>gi|25010277|ref|NP_734672.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|77407940|ref|ZP_00784691.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|339302401|ref|ZP_08651454.1| cysteine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
gi|417004321|ref|ZP_11943054.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|421146701|ref|ZP_15606406.1| cysteinyl-tRNA ligase [Streptococcus agalactiae GB00112]
gi|30316158|sp|Q8E7F2.1|SYC_STRA3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|23094629|emb|CAD45847.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|77173487|gb|EAO76605.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|319744134|gb|EFV96507.1| cysteine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
gi|341578120|gb|EGS28517.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|401686619|gb|EJS82594.1| cysteinyl-tRNA ligase [Streptococcus agalactiae GB00112]
Length = 447
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 47/173 (27%)
Query: 42 LQDCEVALS--------PFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGA 93
+ D EV L P QE+A ++ +++ F M DD NT++ +T
Sbjct: 311 VHDAEVNLKYLKNTFNLPIQENAN--------DEELEQFVKAFQEAMDDDFNTANGITVI 362
Query: 94 FLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKA 153
F + K+IN+ K ++ +L E +L++ G+ V Q+
Sbjct: 363 F-EMAKWINSGHYTSKVKE-TLAE-----------LLEIFGI---------VFQE----- 395
Query: 154 LKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E+ + D+ LIE+R A+ N+DF+ +D+IR +L ++GI L+D + W
Sbjct: 396 ----EVLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRW 444
>gi|420497895|ref|ZP_14996455.1| DALR domain protein [Helicobacter pylori Hp P-25]
gi|393114174|gb|EJC14692.1| DALR domain protein [Helicobacter pylori Hp P-25]
Length = 118
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIESLLKIENEVKVVLDVLGL-L 136
M DDLN S L+ L+++ N K + PK + L +I +K + ++LG+
Sbjct: 1 MQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG-----EILANLKFIEELLGIGF 53
Query: 137 PEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIA 196
+ S Y + L +E + ++ + IEER AK+ KDF K+D IR +L ++ IA
Sbjct: 54 KDPSAYFQ---------LGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIA 104
Query: 197 LMDVRKETIW 206
LMD + TIW
Sbjct: 105 LMDTPQGTIW 114
>gi|70727478|ref|YP_254394.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
gi|109894948|sp|Q4L3I9.1|SYC_STAHJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68448204|dbj|BAE05788.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
Length = 466
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS--KKQPKQQQLSLIESLLKIENEV 126
I + ++F T M DD NT++ +T A+ D K N + Q +S + + +I
Sbjct: 345 IDAIIEQFETVMDDDFNTANAVT-AWYDLSKLANKYVLENNTSTQVISRFKEVYQI---- 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
DVLG+ +G+ K L + D+ LIEER A+KNKDF+++D+I
Sbjct: 400 --FSDVLGVPLKGN--------------KSDMLLDEDIEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMD 199
R L + I L D
Sbjct: 444 RDMLKEQNIILED 456
>gi|410097042|ref|ZP_11292026.1| cysteinyl-tRNA synthetase [Parabacteroides goldsteinii CL02T12C30]
gi|409224836|gb|EKN17760.1| cysteinyl-tRNA synthetase [Parabacteroides goldsteinii CL02T12C30]
Length = 491
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+K LR + Y ++DDLN+ +++ F DA + IN+ K ++ L ++ +
Sbjct: 364 VKDLRKKCYDALNDDLNSPIVISHLF-DASRAINSVKDGKATISAEDLKELKEVFH--TF 420
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V D+LG+ E S + + K +L L+ R AK NKD++ SD+IR
Sbjct: 421 VFDILGMKDEASAGGDNYETFG----KAVDL-------LLTIRQQAKANKDWATSDKIRN 469
Query: 189 DLTRKGIALMDVRKETIWR 207
+LT G + D + W+
Sbjct: 470 ELTAMGFEIKDTKDGAEWK 488
>gi|266623922|ref|ZP_06116857.1| cysteine--tRNA ligase, partial [Clostridium hathewayi DSM 13479]
gi|288864254|gb|EFC96552.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
Length = 215
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 65 AEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIEN 124
+ + + +L ++ M DD NT+ ++ F + +K N++ + ++ ++
Sbjct: 93 SREAVDELVAKYEAAMDDDFNTADGISAVF-ELVKLSNSTAGADSSKAY-----VVYLKE 146
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
++ + DVLG++ E K+ E+ ++++ +I R A+K+K+F+ +D
Sbjct: 147 TIEKLCDVLGIVTE----------------KKEEMLDSEIEEMIAARQQARKDKNFALAD 190
Query: 185 QIRADLTRKGIALMDVRKETIWRPC 209
+IR L KGI L D R+ W+
Sbjct: 191 EIRGKLLEKGIVLEDTREGVKWKRA 215
>gi|254429556|ref|ZP_05043263.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
gi|196195725|gb|EDX90684.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
Length = 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 149 LKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
++K + L+ +D+ L+ ER AKK+K+F+++D+IR LT GI L D R+ T W
Sbjct: 401 FQNKNVSEDGLSNDDIDALVAERTQAKKDKNFARADEIRQQLTDAGIQLEDTREGTRW 458
>gi|420450553|ref|ZP_14949412.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-45]
gi|393067002|gb|EJB67818.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-45]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+ + N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--ILENMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + D+ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQDIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|384887851|ref|YP_005762362.1| cysteinyl-tRNA synthetase [Helicobacter pylori 52]
gi|261839681|gb|ACX99446.1| cysteinyl-tRNA synthetase [Helicobacter pylori 52]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALRG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ STY + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKNPSTYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L + IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKHKIALMDTPQGTIW 461
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VA+ + R + A + I+ +FY M DD NT+ L F +A
Sbjct: 297 TLENIRVAMERAEISFRWEKLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKAVF-EASNA 355
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
+N + + + S++ + ++V +V G+ + + ++ +RA
Sbjct: 356 VNRYLTEVETPKESVLRKAWEF---FRIVSEVFGI------FEDYFRE------QRAGEE 400
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
E + LI+ RA +K ++F+ +D+IR +L GI L D + T+W+
Sbjct: 401 EELIRLLIDVRAQLRKERNFALADRIRDELRNLGIQLEDTPQGTVWK 447
>gi|389857437|ref|YP_006359680.1| cysteinyl-tRNA synthetase [Streptococcus suis ST1]
gi|353741155|gb|AER22162.1| cysteinyl-tRNA synthetase [Streptococcus suis ST1]
Length = 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLAVFGIVFEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
Length = 466
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 32/132 (24%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL-----KIENEVKVVLDVLG 134
M DD NT+ ++ F + K + + E+ +I +E+ + DVLG
Sbjct: 359 MEDDFNTADAISAIF-----------EMVKAANIHVTETSTAAFRDQILSEIVRLCDVLG 407
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
+ E K+ EL ++++ LI+ER A+K K+F+++D+IR +L KG
Sbjct: 408 IKTE----------------KKEELLDDEIQALIDERQAARKAKNFARADEIRDELLAKG 451
Query: 195 IALMDVRKETIW 206
I L D R+ W
Sbjct: 452 IILKDTREGVKW 463
>gi|331701830|ref|YP_004398789.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
gi|329129173|gb|AEB73726.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
Length = 468
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
P + ++++ +F M DD N + + + + KF N ++ +LSL I
Sbjct: 344 PKTDQEVRQIVADFTDAMDDDFNVQNGIAAVY-ELAKFANTYSERETVFKLSL----QFI 398
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
N ++ + V G+ L+++EL ++++ LI ER A+ +KDF +
Sbjct: 399 INTLRQLSGVFGI-----------------KLEQSELKDDEIWSLIHEREQARHDKDFIR 441
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
SD+IR +L +GI L D + T +R
Sbjct: 442 SDEIREELKARGIVLEDTPQGTRFR 466
>gi|149369775|ref|ZP_01889626.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
gi|149356266|gb|EDM44822.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
Length = 493
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 10 FPAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDC- 68
FPA V F + SI ++ NE L+ E + E R+ P +E
Sbjct: 313 FPATVAKF----FMYQAHYRSILDFS-NEA--LEASEKGYNRLMESYRNIDALPVSEMTS 365
Query: 69 --IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+ + Y M+DD N S IL +A KFIN K ++LS + L
Sbjct: 366 MNVSTWKQSCYDAMNDDFN-SPILIAQLFEATKFINGVKD--GNEKLSETDKALLKSTMH 422
Query: 127 KVVLDVLGL---LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
+ DVLGL EGS S L E + LI+ R A+ NKD++KS
Sbjct: 423 AFIFDVLGLEDVSMEGSGDSSKL--------------EGAMNLLIQLRNEARANKDWAKS 468
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
D+IR L GI L D + T +
Sbjct: 469 DEIRDQLQEIGIQLKDGKDGTTF 491
>gi|420528252|ref|ZP_15026644.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-25c]
gi|420530120|ref|ZP_15028505.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-25d]
gi|393134147|gb|EJC34562.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-25c]
gi|393136449|gb|EJC36840.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-25d]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|421858345|ref|ZP_16290616.1| cysteinyl-tRNA synthetase [Paenibacillus popilliae ATCC 14706]
gi|410832103|dbj|GAC41053.1| cysteinyl-tRNA synthetase [Paenibacillus popilliae ATCC 14706]
Length = 474
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 54 EDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL 113
ED + A + + + D F +M DD NT+ +T F D + N++ +Q Q +
Sbjct: 334 EDTANQGPDKALQQKLADILDTFDAKMQDDFNTADAVTAMF-DWVNLANSTMQQGSQDER 392
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
E+L + + + + +VLG +PE E L + + LI+ER
Sbjct: 393 QK-ENLQALLDAFEAMNNVLGFVPEQEEEEEDLLDGE-------------IDRLIQERTD 438
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
A++ K+++++D+IR LT +GI L D + WR
Sbjct: 439 ARQAKNWARADEIRDMLTAQGIILEDTPQGIRWR 472
>gi|420430682|ref|ZP_14929710.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-20]
gi|393047379|gb|EJB48354.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-20]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|355679553|ref|ZP_09061386.1| cysteinyl-tRNA synthetase [Clostridium citroniae WAL-17108]
gi|354812130|gb|EHE96750.1| cysteinyl-tRNA synthetase [Clostridium citroniae WAL-17108]
Length = 469
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
+L +F M DD NT+ ++ F + +K N++ + S LK ++ +
Sbjct: 353 RLLGKFEEAMDDDFNTADAISAVF-ELVKLANSTADASSTKAYV---SYLK--KTIEDLC 406
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
DVLG++ E K+ E+ ++D+ +I R A+K+K+F+ +D+IR L
Sbjct: 407 DVLGIITE----------------KKEEVLDSDIEDMIAARQQARKDKNFALADEIRGKL 450
Query: 191 TRKGIALMDVRKETIWR 207
GI L D R+ W+
Sbjct: 451 LDMGIVLEDTREGVKWK 467
>gi|242310378|ref|ZP_04809533.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
gi|239522776|gb|EEQ62642.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
Length = 467
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 61 ITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
I A E + ++ ++DDLN S L+ +D +FIN + + ++Q I S+
Sbjct: 334 IQEADESQCNEFKEAILEALNDDLNISKALS--VVD--EFINKANEFLDKKQKDKISSIA 389
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
++ +L V G P E Q L +E + ++ +LI +R AKK KDF
Sbjct: 390 GFLAILERLLGVGGKNP-----FEYFQ------LGVSEEQKQEIENLIAQRTEAKKQKDF 438
Query: 181 SKSDQIRADLTRKGIALMDVRKETIW 206
+K+D+IR L GI +MD+ +++W
Sbjct: 439 AKADEIRERLHSMGIEIMDLPTKSVW 464
>gi|420426000|ref|ZP_14925059.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-5]
gi|393039810|gb|EJB40832.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-5]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|139474431|ref|YP_001129147.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
gi|134272678|emb|CAM30949.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
Length = 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
L D E+ L + + A E +K+ F M DD NT++ +T F D K+I
Sbjct: 311 LHDAEINLKYLKNTLQQPLTETADEQELKQFVIAFQDAMDDDFNTANGITVVF-DMAKWI 369
Query: 102 NN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N+ S +P +++ + +L V G++ E E+
Sbjct: 370 NSGSYTEP-------------VKSAFEKMLAVFGIIFE------------------EEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E D+ LI +R A+ N+DF+ +D IR L +GI L+D + W
Sbjct: 399 EVDIEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKDGVRW 444
>gi|398341985|ref|ZP_10526688.1| cysteinyl-tRNA ligase [Leptospira inadai serovar Lyme str. 10]
Length = 470
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 71 KLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVL 130
KL ++ ++DDLN S L + +A++ +N Q + S IE ++ V +L
Sbjct: 352 KLWEDMLDALADDLNISKFLASTY-EAVRTVNQRMDQLGWGK-SEIEDAIRFFERVDRIL 409
Query: 131 DVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
VL LKR L ++++ L+++R A+KNKDF+ SD+IR L
Sbjct: 410 GVLSF-----------------DLKRESL-DSEIDELVKQRLEARKNKDFALSDKIRDQL 451
Query: 191 TRKGIALMDVRKETIWR 207
GI + D ++ WR
Sbjct: 452 NDMGIVIEDTKEGLRWR 468
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 57 RSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQL 113
++G + E +K L F M +D N + G +K N +S + + +
Sbjct: 332 KNGKVDELLEKRLKDLLARFEEAMDEDFNAPKAI-GEVFSVIKTFNQYLDSITEGDKPKK 390
Query: 114 SLIESLLKIENEVKVVLDVLG------LLPEGSTYSEVLQQLKDKALKRAELAENDVLHL 167
+ E+ L+ N++K VL V +PEG V +++K
Sbjct: 391 AYKETFLESMNKIKSVLGVFDTSSASWFIPEGIDVDWVEERIK----------------- 433
Query: 168 IEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+RA A+KNKD+ +D+IR +L KGI L D ++ T W+
Sbjct: 434 --QRALARKNKDYETADKIRDELNGKGIILEDAKEYTRWK 471
>gi|385220732|ref|YP_005782204.1| cysteinyl-tRNA synthetase [Helicobacter pylori India7]
gi|317009539|gb|ADU80119.1| cysteinyl-tRNA synthetase [Helicobacter pylori India7]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|108563291|ref|YP_627607.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
gi|123373736|sp|Q1CSY9.1|SYC_HELPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|107837064|gb|ABF84933.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+ + N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLENMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D+IR +L + IALMD + TIW
Sbjct: 431 EQKDFLKADRIREELLNRKIALMDTPQGTIW 461
>gi|423526408|ref|ZP_17502857.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401163458|gb|EJQ70804.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
++K + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 400 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKGRNIILEDTVQGTRWK 463
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VAL + G + + I++ + +FY M DD NT+ L F +
Sbjct: 321 TLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMDDDFNTAEALKAVF-EVANA 379
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN + + + S++ L+ K+V +V G+ + Y + ++++ K EL
Sbjct: 380 INKYLTEANKPKESILRKALEF---FKIVSEVFGVFED---YFREETKEREESEKLIEL- 432
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCV 210
L+E R +K K + +D IR +L + GI L D ET W+ +
Sbjct: 433 ------LVEVRKQLRKEKRYELADMIREELKKLGIQLEDRGSETTWKRII 476
>gi|339624899|ref|ZP_08660688.1| cysteinyl-tRNA synthetase [Fructobacillus fructosus KCTC 3544]
Length = 468
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 56 ARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
+G ++ + + L + F M DD + LT F +AL N S + +
Sbjct: 337 GNTGEVSADLAEQVHLLEERFIGAMDDDFGVENALTVVF-EALTLANRSLEAGESAA--- 392
Query: 116 IESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
L IEN ++ L + G+ + E QL D +V L+E RA A+
Sbjct: 393 --GLQLIENHLQNWLHIFGI-----DHFEEEHQLSD-----------EVKRLLEHRAQAR 434
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETI 205
K KDF+ SD++R L GIA+ D R I
Sbjct: 435 KEKDFALSDELRDALRENGIAVKDGRDGQI 464
>gi|406027305|ref|YP_006726137.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri CD034]
gi|405125794|gb|AFS00555.1| Cysteinyl-tRNA synthetase [Lactobacillus buchneri CD034]
Length = 468
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 63 PAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKI 122
P + ++++ +F M DD N + + + + KF N ++ +LSL I
Sbjct: 344 PKTDQEVRQIVADFTDAMDDDFNVQNGIAAVY-ELAKFANTYSERETVFKLSL----QFI 398
Query: 123 ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
N ++ + V G+ L+++EL ++++ LI ER A+ +KDF +
Sbjct: 399 INTLRQLSGVFGI-----------------KLEQSELKDDEIWSLIHEREQARHDKDFIR 441
Query: 183 SDQIRADLTRKGIALMDVRKETIWR 207
SD+IR +L +GI L D + T +R
Sbjct: 442 SDEIREELKARGIVLEDTPQGTRFR 466
>gi|420487592|ref|ZP_14986196.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-8]
gi|420521374|ref|ZP_15019805.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-8b]
gi|393102169|gb|EJC02735.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-8]
gi|393127961|gb|EJC28406.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-8b]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGMSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I+ L+ +F M DDLNT+ TG + ++ IN ++ L+ + LK
Sbjct: 344 AIEDLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANSCSKEALTFAKDTLK------ 396
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ +LG+L + E + Q ++L L+E+R A+K K+F+++D+IR
Sbjct: 397 ELCGILGILEQYGAKEEAIPQ--------------EILELVEKRNQARKVKNFAEADRIR 442
Query: 188 ADLTRKGIALMDVRKET 204
+L G ++D + T
Sbjct: 443 DELKSLGYIVLDTPQGT 459
>gi|148273671|ref|YP_001223232.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166200144|sp|A5CTY3.1|SYC_CLAM3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|147831601|emb|CAN02569.1| cysS1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 484
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 62 TPAAED-CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
PAA D + DEF M DDL+ L DA++ N + Q+ +
Sbjct: 347 APAAPDGSPAAVPDEFAEAMDDDLSVPQALA-VLHDAVRAGNAALDAGDLQEAA------ 399
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
+ +V ++ VLG+ P + Q +AL+ V H I ER TA++ +DF
Sbjct: 400 SLRADVSAMVAVLGIDPLADEWRTASDQPARRALQAL------VEHRIAERQTAREARDF 453
Query: 181 SKSDQIRADLTRKGIALMDVRKETIW 206
+ +D+IR +L GI + D + W
Sbjct: 454 ALADRIRQELAEAGITIEDSPGGSHW 479
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ VAL + G + + I++ + +FY M DD NT+ L F +
Sbjct: 327 TLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMDDDFNTAEALKAVF-EVANA 385
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN + + + S++ L+ K+V +V G+ + Y + ++++ K EL
Sbjct: 386 INKYLTEANKPKESILRKALEF---FKIVSEVFGVFED---YFREETKEREESEKLIEL- 438
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWRPCV 210
L+E R +K K + +D IR +L + GI L D ET W+ +
Sbjct: 439 ------LVEVRKQLRKEKRYELADMIREELKKLGIQLEDRGSETTWKRII 482
>gi|420486080|ref|ZP_14984695.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4]
gi|420516557|ref|ZP_15015018.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4c]
gi|420518442|ref|ZP_15016893.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4d]
gi|393100682|gb|EJC01256.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4]
gi|393121905|gb|EJC22383.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4d]
gi|393122621|gb|EJC23094.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-4c]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 58 SGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIE 117
S S+ AAE+ +K F+ M DD NT + TGA D K IN E
Sbjct: 349 SRSLEKAAEESLKA----FHEAMDDDFNTG-LATGAMFDLAKAINIYGTAVDGGLSVDHE 403
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI-EERATAKK 176
++ K +K ++D+LG +L+++ +K + + ND++ +I R TA+K
Sbjct: 404 AVEKAYTALKTIMDILG----------ILEEVWEKTDSPDDKSYNDLMDIILAVRQTARK 453
Query: 177 NKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
K + +D+IR L GI + D W+
Sbjct: 454 EKMYKIADEIRDRLDAAGIVIEDTPTGARWK 484
>gi|237720477|ref|ZP_04550958.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|229450228|gb|EEO56019.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
Length = 493
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA+ +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPASATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDKIRNALTALGFEIKDTKDGFEWR 490
>gi|422884840|ref|ZP_16931288.1| cysteine--tRNA ligase [Streptococcus sanguinis SK49]
gi|332359270|gb|EGJ37091.1| cysteine--tRNA ligase [Streptococcus sanguinis SK49]
Length = 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + ++ N + VV ++ + G+ +E
Sbjct: 318 LKYLKNTYEQPFTGQADSNQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKEAFAKLLEVFGIVFVEEVLDADIERLIEERQAARANRDFATADRIRDELATQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|386582878|ref|YP_006079282.1| cysteinyl-tRNA synthetase [Streptococcus suis SS12]
gi|353735024|gb|AER16034.1| cysteinyl-tRNA synthetase [Streptococcus suis SS12]
Length = 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLAVFGIVFEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|347536506|ref|YP_004843931.1| cysteine--tRNA ligase [Flavobacterium branchiophilum FL-15]
gi|345529664|emb|CCB69694.1| Cysteine--tRNA ligase [Flavobacterium branchiophilum FL-15]
Length = 492
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN--NSKKQP-KQQQLSLIESLLKIENE 125
+K + Y M+DD N IL +A+K+IN N KK+ L+ L
Sbjct: 368 LKTWKSNCYEAMNDDFNAP-ILIANLFEAVKYINWLNDKKETIHSDDLADFTKTLH---- 422
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
V DVLGL + + + EN V LIE R A+ NKDF+ SDQ
Sbjct: 423 -AFVFDVLGL------------EDTKASTNHSNKLENVVQILIEMRKEARDNKDFALSDQ 469
Query: 186 IRADLTRKGIALMDVRKET 204
IR L GI L D ++ T
Sbjct: 470 IRNQLLAIGIQLKDGKEGT 488
>gi|146319578|ref|YP_001199290.1| cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
gi|146321776|ref|YP_001201487.1| cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|253752580|ref|YP_003025721.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
gi|253754406|ref|YP_003027547.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
gi|253756340|ref|YP_003029480.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
gi|386578729|ref|YP_006075135.1| cysteinyl-tRNA synthetase [Streptococcus suis GZ1]
gi|386589002|ref|YP_006085403.1| cysteinyl-tRNA synthetase [Streptococcus suis A7]
gi|403062341|ref|YP_006650557.1| cysteinyl-tRNA ligase [Streptococcus suis S735]
gi|145690384|gb|ABP90890.1| Cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
gi|145692582|gb|ABP93087.1| Cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|251816869|emb|CAZ52516.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
gi|251818804|emb|CAZ56644.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
gi|251820652|emb|CAR47412.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
gi|292559192|gb|ADE32193.1| Cysteinyl-tRNA synthetase [Streptococcus suis GZ1]
gi|354986163|gb|AER45061.1| cysteinyl-tRNA synthetase [Streptococcus suis A7]
gi|402809667|gb|AFR01159.1| cysteinyl-tRNA ligase [Streptococcus suis S735]
Length = 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLAVFGIVFEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|15611885|ref|NP_223536.1| cysteinyl-tRNA synthetase [Helicobacter pylori J99]
gi|6831687|sp|Q9ZKW6.1|SYC_HELPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|4155389|gb|AAD06399.1| CYSTEINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|293378885|ref|ZP_06625040.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
gi|292642426|gb|EFF60581.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
Length = 446
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N Q + L + E
Sbjct: 327 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQAEVSAAVLAQG----EALFSQ 381
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 382 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 424
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 425 LLKEKGILLEDTPQGTRWR 443
>gi|262384651|ref|ZP_06077784.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
gi|262293632|gb|EEY81567.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
Length = 491
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 42 LQDCEVALSPFQED-ARSGSITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDAL 98
LQ E LS E + P+A + K LR++ + M+DDLN+ +++ F D
Sbjct: 334 LQAAEKGLSRLMEAYGHLMKLKPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLF-DVA 392
Query: 99 KFINNSKKQPKQQQLSLIESLLKIENEVK--VVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
+ IN+ K + +L E LK EV + D+LG+ E S + K
Sbjct: 393 RTINSVK----DGKATLSEEDLKELQEVFHLFLFDILGMKDEASASGSNYETFS----KA 444
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+L L+ R AK NKD++ SD+IR +LT G + D + W+
Sbjct: 445 VDL-------LLSIRQQAKANKDWATSDKIRNELTAMGFEIKDTKDGAEWK 488
>gi|293368873|ref|ZP_06615476.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
gi|292636022|gb|EFF54511.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
Length = 493
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA+ +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPASATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDKIRNALTALGFEIKDTKDGFEWR 490
>gi|420531460|ref|ZP_15029833.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-28b]
gi|393137132|gb|EJC37519.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-28b]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADNIREELLQQKIALMDTPQGTIW 461
>gi|420489375|ref|ZP_14987970.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-11]
gi|420523132|ref|ZP_15021553.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-11b]
gi|393106215|gb|EJC06760.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-11]
gi|393129130|gb|EJC29569.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-11b]
Length = 465
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIESKIEERKCAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|403508980|ref|YP_006640618.1| cysteine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
gi|402799111|gb|AFR06521.1| cysteine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
Length = 466
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQ-QLSLIE 117
G ITPAAE + + F + DDL S AL ++ ++ E
Sbjct: 333 GEITPAAE-----VPEAFAEALDDDLGVSQ--------ALAVVHGHVREGNTALAAGGKE 379
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+ ++ +E++V+L VLGL P ++ Q L+ E+ + V +E+R A+
Sbjct: 380 RVRELASELRVMLGVLGLDPLSDQWASEGQGLR-------EVVDALVAVALEQRQAARGR 432
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
KD++ +D IR LT G+ + D + W
Sbjct: 433 KDYAAADAIRDRLTEAGVVVEDTPQGPRW 461
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 41 TLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
TL++ +A+ + + A + I++ R +FY M DD NT+ L F +
Sbjct: 322 TLENIRIAMRNAELSYKWSEKDFEAYEAIREARKKFYDAMDDDFNTAEALKAVF-EVSNA 380
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN + + + S++ L+ KVV +V G+ + Y + ++ +++ L EL
Sbjct: 381 INKYILEVDKPKESILRKALEF---FKVVSEVFGIFED---YFKEEKKGEEEKL--IEL- 431
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
L+E R +K K F +D+IR +L + GI L D +ET+W+
Sbjct: 432 ------LVEVRKQLRKEKRFDLADKIREELRKLGIQLEDKGQETVWK 472
>gi|159903756|ref|YP_001551100.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888932|gb|ABX09146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 516
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 51 PFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDA--LKFINNSKKQP 108
P + + S A + + LR F M+DDLNTS + F A LK I N ++
Sbjct: 361 PVNKTTETNSTPTEAREELDHLRQRFIDVMNDDLNTSAAMAVLFELARPLKSIANEIERN 420
Query: 109 KQQQLSLIESLLKIENEVKVV--LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVL- 165
+Q+ I++ + +V +VLGL E +K + L R N +
Sbjct: 421 PYKQIPDIKAKKLYARWLTLVELANVLGLQGE----------MKQENLSRNSSIPNKSVI 470
Query: 166 -HLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
I++R+ AK+ +++ K+DQIR DL ++GI L+D
Sbjct: 471 EEAIKQRSAAKRVRNYEKADQIRDDLKKQGIELID 505
>gi|407013339|gb|EKE27495.1| hypothetical protein ACD_3C00198G0009 [uncultured bacterium (gcode
4)]
Length = 485
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
E+ +++ DD NT L F + +K++N + I++ + E+K V+DV
Sbjct: 369 EYISKLEDDFNTPEALATVF-EFIKYVN-----------TFIDAEAFNDKEIKAVIDVF- 415
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
T++EVL + L++ E +++ L+E+R AK DF+ +D IR+++ ++
Sbjct: 416 -----KTFNEVLSIMDFTILEKEENIPENIIKLVEQRVQAKLAHDFTLADSIRSEVEKRW 470
Query: 195 IALMD 199
++D
Sbjct: 471 YKIVD 475
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 10/171 (5%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
L D AL+ ++ A D + F M DD NT L D
Sbjct: 309 LDDARQALTRLYTALKAAPAEAVAVDWNEAHAQRFQAAMDDDFNTPEALA-VLFDLANEA 367
Query: 102 NNSKKQPKQQQLSLIESLLKI-----ENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKR 156
N SK QL + +L + E+ +K + + G+ + + L
Sbjct: 368 NRSKDSAVAAQLKALAGVLGLLARSPEDYLKGRV----VYGSGNATMSLSGNGEGTLLVG 423
Query: 157 AELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
++E+D+ I+ R AKK K+F+++D++RA+L GI L D + T WR
Sbjct: 424 GGISESDIEARIQARIDAKKAKNFAEADRLRAELLAAGIVLEDSAQGTTWR 474
>gi|295086168|emb|CBK67691.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
Length = 493
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPAPATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KELKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|283781355|ref|YP_003372110.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
gi|283439808|gb|ADB18250.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
Length = 515
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 59 GSITPAAE---DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSL 115
G PA + + R F +M DD NT GA D + + K Q +L
Sbjct: 364 GEFDPAGDPLLTLVHGFRQGFLEKMDDDFNTG----GAMSDLFEMVREMNKFADQNKLDE 419
Query: 116 IESL--------LKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHL 167
+ L +K ++ + +LGL + Q K A L + V+ L
Sbjct: 420 VTQLPHPQVAILVKAAKTLRELTSILGLF--------LSQPAKRGGGGDAVLPK--VMQL 469
Query: 168 IEE-RATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ E R A+ KDF+ +D+IR L GIAL D + T WR
Sbjct: 470 MMELRTEARNRKDFATADRIRLGLAEMGIALEDRKGTTEWR 510
>gi|386283685|ref|ZP_10060909.1| cysteinyl-tRNA synthetase [Sulfurovum sp. AR]
gi|385345228|gb|EIF51940.1| cysteinyl-tRNA synthetase [Sulfurovum sp. AR]
Length = 469
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 61 ITPAAEDCIKK-LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIE 117
++P + K + MSDDLN S L A +D + N PK + L E
Sbjct: 333 VSPGKASAVNKTFKKALLDAMSDDLNISIAL--AVIDEMVAATNDALDNNPKDKALKK-E 389
Query: 118 SLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKN 177
+L IE + +LG G Q D+ALK+ + L+ ER+ AKK
Sbjct: 390 TLANIE----FIDTLLGF--GGKEPFSYFQIGVDEALKQQ------IETLLSERSEAKKE 437
Query: 178 KDFSKSDQIRADLTRKGIALMDVRKETIW 206
K+FS+SD IR +L GI++MD T+W
Sbjct: 438 KNFSRSDAIRDELIALGISIMDTPDGTLW 466
>gi|385217630|ref|YP_005779106.1| cysteinyl-tRNA synthetase [Helicobacter pylori F16]
gi|317177679|dbj|BAJ55468.1| cysteinyl-tRNA synthetase [Helicobacter pylori F16]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 69/158 (43%), Gaps = 40/158 (25%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQ----- 111
G I P + E M DDLN S L+ L+++ N K + PK +
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKGE 384
Query: 112 ---QLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLI 168
L IE LL I + V LG+ GS E+ EN I
Sbjct: 385 ILANLKFIEELLGIGFKDPVEYFQLGV--SGSEKQEI---------------ENK----I 423
Query: 169 EERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
EER AKK KDF K+D+IR +L ++ IALMD + TIW
Sbjct: 424 EERKRAKKQKDFLKADRIREELLKQKIALMDTPQGTIW 461
>gi|227552721|ref|ZP_03982770.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
gi|257897353|ref|ZP_05677006.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
gi|227178121|gb|EEI59093.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
gi|257833918|gb|EEV60339.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
Length = 470
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N Q + L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQAEVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|313884762|ref|ZP_07818517.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620023|gb|EFR31457.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
Length = 475
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 21/140 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
+ +L +F M DD N ++ +T F + +K IN + Q ++ + L K++ K
Sbjct: 355 VLAQLEADFIQAMDDDFNAANGMTVIF-ELVKEIN----RYLQSEVVSEKVLSKMQEIFK 409
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+L + GL+ E + +L + ++ LI+ER A+K KDF ++D+IR
Sbjct: 410 DLLAIFGLVFE----------------TKEDLLDQEIQALIDERNVARKAKDFGRADEIR 453
Query: 188 ADLTRKGIALMDVRKETIWR 207
L +GI L D + T W+
Sbjct: 454 DQLKEQGIYLDDTPQGTTWK 473
>gi|423671539|ref|ZP_17646543.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401291928|gb|EJR97593.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++K + F M DD NT++ +T + + + N + ++ +IE+ +K +++
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELY-NVANYANQYLLEEHTSKV-VIEAYVK---QLET 401
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ +LGL L + EL + ++ LI++R A++N+DF+ SDQIR
Sbjct: 402 LFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
DL + I L D + T W+
Sbjct: 445 DLKGRNIILEDTAQGTRWK 463
>gi|336403704|ref|ZP_08584414.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_30]
gi|335945196|gb|EGN07010.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_30]
Length = 493
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITP++ +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPSSSTSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KELKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|322386163|ref|ZP_08059796.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|417921276|ref|ZP_12564768.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|321269743|gb|EFX52670.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|342834436|gb|EGU68705.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
Length = 447
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP--KQQQLSLIESLL-----------KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + + +++ L N + VV ++ + G+ ++
Sbjct: 318 LKYLKNTYEQPFTGQAESAQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAK 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V L + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKAALAELLEVFGIVFVEEVLDADIERLIEERQVARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|298480481|ref|ZP_06998678.1| cysteine--tRNA ligase [Bacteroides sp. D22]
gi|423214789|ref|ZP_17201317.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
gi|298273302|gb|EFI14866.1| cysteine--tRNA ligase [Bacteroides sp. D22]
gi|392692052|gb|EIY85290.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
Length = 493
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPAPATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KELKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|420418832|ref|ZP_14917924.1| cysteine--tRNA ligase [Helicobacter pylori NQ4076]
gi|393033658|gb|EJB34721.1| cysteine--tRNA ligase [Helicobacter pylori NQ4076]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 ERKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|420415261|ref|ZP_14914376.1| cysteine--tRNA ligase [Helicobacter pylori NQ4053]
gi|393032729|gb|EJB33794.1| cysteine--tRNA ligase [Helicobacter pylori NQ4053]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 42 LQDCEVALSPFQEDARS-GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKF 100
LQ+ AL+ F R S+ P + R+ F+ M DD NT L D +
Sbjct: 309 LQNARSALTRFYTALRGLPSVEPVGGET---FRERFHAAMDDDFNTPEALA-VLFDLARE 364
Query: 101 INNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
IN + +E + E++ + +VLG+L + + + L+ A LA
Sbjct: 365 INRVRADD-------LERAAALGAELRRMGEVLGILQD-----DAERYLRGDATA-GGLA 411
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
D+ LI +R A+ K+++++D+IRA LT GI L D + TIWR
Sbjct: 412 NADIDDLIAQRIAARAAKNWAEADRIRAVLTEAGIVLEDNPQGTIWR 458
>gi|410593906|ref|YP_006950633.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae SA20-06]
gi|421532835|ref|ZP_15979180.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae STIR-CD-17]
gi|403641894|gb|EJZ02803.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae STIR-CD-17]
gi|410517545|gb|AFV71689.1| Cysteine--tRNA ligase [Streptococcus agalactiae SA20-06]
Length = 447
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 31/131 (23%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT++ +T F + K+IN+ K ++ +L E +L++ G+
Sbjct: 345 FQEAMDDDFNTANGITVIF-EMAKWINSGHYTSKVKE-TLAE-----------LLEIFGI 391
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
V Q+ E+ + D+ LIE+R A+ N+DF+ +D+IR +L ++GI
Sbjct: 392 ---------VFQE---------EVLDADIESLIEQRQEARANRDFATADRIRDELAKQGI 433
Query: 196 ALMDVRKETIW 206
L+D + W
Sbjct: 434 KLLDTKDGVRW 444
>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 468
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQL--SLIESLLKIEN 124
D I + EF+ +M DD NT +T F ++ + + + K+ + + + +L+ N
Sbjct: 347 DKISAVLVEFHEKMQDDFNTPDAITAMF----QWASEANQLLKEASIPAANLHEVLRAFN 402
Query: 125 EVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSD 184
E+ VL ++ + EL + ++ LI ER A+KNK+++++D
Sbjct: 403 EMNSVLRIVNTGTD-------------------ELLDEEIEALIAERVEARKNKNWARAD 443
Query: 185 QIRADLTRKGIALMDVRKETIWR 207
+IR L +GI L D + WR
Sbjct: 444 EIRDKLADEGIVLEDTAQGMRWR 466
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 72 LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLD 131
++++ +M DD NT+ ++ F D ++ IN + +KI++ K++
Sbjct: 350 YKEKYIEKMDDDFNTADAVSVIF-DLIRDINTN---------------VKIDSSKKLIKH 393
Query: 132 VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
L L+ E +LQ+ K L E + LIEER A+K+K+++ SD+IR DL
Sbjct: 394 CLNLIKELGKPLGILQKSKKGNL------EEKIEALIEERQQARKDKNWALSDKIRDDLK 447
Query: 192 RKGIALMDVRKETIWR 207
+GI L D + W+
Sbjct: 448 EQGILLEDTPQGVRWK 463
>gi|445060493|ref|YP_007385897.1| cysteinyl-tRNA ligase [Staphylococcus warneri SG1]
gi|443426550|gb|AGC91453.1| cysteinyl-tRNA ligase [Staphylococcus warneri SG1]
Length = 466
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I ++ + F M DD NT++ +T A+ D K N + + ++ + + K + ++
Sbjct: 345 IDQILENFEAVMDDDFNTANAVT-AWYDLAKLAN----RYVLENVTSSKVIAKFKEVYQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ +G+ ++ +L + ++ LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGVPLKGN--------------QQDDLLDEEIEQLIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMD 199
L + I L D
Sbjct: 446 HLKEQNIILED 456
>gi|420420156|ref|ZP_14919243.1| cysteine--tRNA ligase [Helicobacter pylori NQ4161]
gi|393037392|gb|EJB38428.1| cysteine--tRNA ligase [Helicobacter pylori NQ4161]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|257888689|ref|ZP_05668342.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|424762689|ref|ZP_18190189.1| cysteine--tRNA ligase [Enterococcus faecalis TX1337RF]
gi|431043157|ref|ZP_19492956.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1590]
gi|431753323|ref|ZP_19541997.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2620]
gi|431758675|ref|ZP_19547300.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3083]
gi|431763439|ref|ZP_19551989.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3548]
gi|257824743|gb|EEV51675.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|402424260|gb|EJV56447.1| cysteine--tRNA ligase [Enterococcus faecium TX1337RF]
gi|430561601|gb|ELB00864.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1590]
gi|430612230|gb|ELB49281.1| cysteinyl-tRNA synthetase [Enterococcus faecium E2620]
gi|430617043|gb|ELB53929.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3083]
gi|430622212|gb|ELB58949.1| cysteinyl-tRNA synthetase [Enterococcus faecium E3548]
Length = 470
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ L F M DD N ++ +T + + K++N Q + L + E
Sbjct: 351 LENLEQRFIEEMDDDFNAANGITVVY-ELAKWLNTYLDQAEVSAAVLAQG----EALFSQ 405
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
L + G+L EL + ++ LIEER A+ N+DF++SD+IR
Sbjct: 406 WLSIFGIL-----------------FTAEELLDEEIEQLIEERNQARSNRDFARSDEIRD 448
Query: 189 DLTRKGIALMDVRKETIWR 207
L KGI L D + T WR
Sbjct: 449 LLKEKGILLEDTPQGTRWR 467
>gi|255994717|ref|ZP_05427852.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
gi|255993430|gb|EEU03519.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
Length = 462
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 29/150 (19%)
Query: 54 EDARSGSITPAAEDCIKKLR---DEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQ 110
E+ G ++ EDCI +L D F M DDLNT+ +T F + + IN+ ++ +
Sbjct: 330 ENGHEGEVS---EDCINQLNKRIDSFKMHMEDDLNTADAITDIF-EMVTDINSQLEKNGK 385
Query: 111 QQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEE 170
+ L S L+ V ++LG L T E+ EN V L +E
Sbjct: 386 EYARLALSKLQ------EVSNILGFLQGEGT---------------EEIPEN-VKILADE 423
Query: 171 RATAKKNKDFSKSDQIRADLTRKGIALMDV 200
R A+KNKDF ++D++R ++ + G + D+
Sbjct: 424 RQEARKNKDFKRADELRDEVLKLGYEIKDM 453
>gi|423071176|ref|ZP_17059951.1| cysteinyl-tRNA synthetase [Streptococcus intermedius F0413]
gi|355364538|gb|EHG12270.1| cysteinyl-tRNA synthetase [Streptococcus intermedius F0413]
Length = 447
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + ++ N + VV ++ + G+ +E
Sbjct: 318 LKYLKNTYEQPFTGQADSAQLQAFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAE 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V + E+ + DV LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 VKAAFAKLLEVFGIVFVEEVLDADVERLIEERQVARANRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|262405523|ref|ZP_06082073.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|294646338|ref|ZP_06723985.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294806673|ref|ZP_06765504.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|345510709|ref|ZP_08790271.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
gi|229442730|gb|EEO48521.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
gi|262356398|gb|EEZ05488.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|292638293|gb|EFF56664.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294446093|gb|EFG14729.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
Length = 493
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITPA +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPAPATSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KELKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|91070003|gb|ABE10929.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
ASNC3046]
Length = 489
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 SEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRK 202
+EVL K+ +K +++ ++++ LI+ER AKK K+++K+D+IR L KGI L+D K
Sbjct: 422 TEVLGLKKEVLVKESKIKDDEISSLIDERLKAKKEKNYAKADEIRNFLKEKGIELIDQSK 481
Query: 203 E-TIW 206
E T W
Sbjct: 482 EITTW 486
>gi|386755890|ref|YP_006229107.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan18]
gi|384562148|gb|AFI02614.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan18]
Length = 465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|403047548|ref|ZP_10903016.1| cysteinyl-tRNA synthetase [Staphylococcus sp. OJ82]
gi|402763082|gb|EJX17176.1| cysteinyl-tRNA synthetase [Staphylococcus sp. OJ82]
Length = 466
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A + I + +F T M+DD NT++ +T A+ D K N + ++IE ++
Sbjct: 340 AYVEAIDDILKQFETVMNDDFNTANAIT-AWYDLAKLANKYILE-NTTSTTVIERFKQV- 396
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
++ DVLG+ +G +L + V LIEER A++NKDF+++
Sbjct: 397 --YEIFSDVLGVPLKGKESDMLLDE--------------QVEALIEERNKARQNKDFARA 440
Query: 184 DQIRADLTRKGIALMD 199
D+IR DL + I L D
Sbjct: 441 DEIRDDLKAQNIILED 456
>gi|242372747|ref|ZP_04818321.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
gi|242349520|gb|EES41121.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
Length = 466
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I ++ +F T M DD NT++ +T A+ D K N + + + + K + ++
Sbjct: 345 IDEILKQFETVMDDDFNTANAVT-AWYDLAKLAN----KYVLENTTSTKVFNKFKEVYQI 399
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
DVLG+ +G E+L + +K LIEER A+KNKDF+++D+IR
Sbjct: 400 FSDVLGVPLKGKEADELLDEEIEK--------------LIEERNEARKNKDFARADEIRD 445
Query: 189 DLTRKGIALMDV 200
L + I L D
Sbjct: 446 MLKERNIILEDT 457
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I+ L+ +F M DDLNT+ TG + ++ IN ++ L+ + LK
Sbjct: 344 AIEDLKAKFIDAMEDDLNTAEA-TGYLFEMVREINTYANSCSKETLTFAKDTLK------ 396
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
+ +LG+L + S E + Q ++L L+++R A+K K+F+++D+IR
Sbjct: 397 ELCSILGILEQYSEKEEAIPQ--------------EILELVKKRNQARKAKNFAEADRIR 442
Query: 188 ADLTRKGIALMDVRKET 204
+L G ++D + T
Sbjct: 443 DELKSLGYIVLDTPQGT 459
>gi|371778364|ref|ZP_09484686.1| cysteinyl-tRNA synthetase [Anaerophaga sp. HS1]
Length = 491
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 28/154 (18%)
Query: 61 ITPAAEDC--IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNS---KKQPKQQQLSL 115
I PA++ +K+ +++ Y + DDLN S +L + K IN++ K+ + L
Sbjct: 354 IKPASQSTFDVKEFKEKCYAALDDDLN-SPVLIAHLFEGAKIINSAIAGKETFSKNDLEE 412
Query: 116 IESLLKIENEVKVVLDVLGLLPEG---STYSEVLQQLKDKALKRAELAENDVLHLIEERA 172
+ + +E D+LGL E S++ EVL + + L+ R
Sbjct: 413 FRQTMHLFSE-----DILGLKVESTAESSHPEVLDGVMNL--------------LLSIRQ 453
Query: 173 TAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
AKK KDF+ +D+IR +L + GI L D + +T W
Sbjct: 454 QAKKAKDFATADKIRDELKQLGIELRDAKDKTEW 487
>gi|414864764|tpg|DAA43321.1| TPA: hypothetical protein ZEAMMB73_932159 [Zea mays]
Length = 308
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 40 ITLQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTG--AFLDA 97
+TL DCE LS ++E+ S + ++ + + F MSDDL T+ +L G F D
Sbjct: 159 VTLYDCEEMLSKYREEGISVPVPAEEQNLVNRHHKAFLDSMSDDLKTTEVLDGEDGFTDL 218
Query: 98 LKFINNSKKQPKQQQLS-------------LIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK IN++ K+ Q ++ L+ +E E+K L +LGL +
Sbjct: 219 LKAINSNLNDLKKLQQKLKQQQQTQKQPEDYVQGLIALETEIKDKLSLLGLEVLKPPWPR 278
Query: 145 VLQQLKDKALKRA 157
L D A R+
Sbjct: 279 YSAHLGDYAKSRS 291
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 11 PAFVRTLLLDIFWLNELFASIPQYTGNETITLQDCEVALSPFQEDARSGSITPAAEDCIK 70
P VR LL + + L A P+Y L + QE + + + +
Sbjct: 285 PPAVRLFLLSTHYRSPL-AYTPEYLEGAAKALSRLRSSWLFLQEAQKQAEESSGGTEQLA 343
Query: 71 KL---RDEFYTRMSDDLNTSHILTGAFLDALKFINN-SKKQPKQQQLSLIESLLKIENEV 126
+L +F M DD NT+ L F D IN+ ++ +P L +LL +
Sbjct: 344 RLDKWEQDFTAAMDDDFNTARALA-LFFDLAHEINSWAELRPLPPAPVLRRALL-----L 397
Query: 127 KVVLD-VLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
V + VLGL PE V Q+ R + E V L+E R A++ KD++ +D+
Sbjct: 398 WVSFNRVLGLFPERRGLPVVEQE-------RTMVLEELVKLLVEIRQEARQRKDWATADR 450
Query: 186 IRADLTRKGIALMDVRKETIWR 207
IR L GI L D T WR
Sbjct: 451 IRESLKNLGIVLEDTPAGTRWR 472
>gi|407775516|ref|ZP_11122810.1| cysteinyl-tRNA synthetase [Thalassospira profundimaris WP0211]
gi|407281523|gb|EKF07085.1| cysteinyl-tRNA synthetase [Thalassospira profundimaris WP0211]
Length = 458
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LI +RA AKKNKDF+ +D+IR DL +GI L D ++ T W+
Sbjct: 416 LIAQRADAKKNKDFATADKIRDDLLARGIILEDFKEGTSWK 456
>gi|420501709|ref|ZP_15000253.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-30]
gi|393150515|gb|EJC50823.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-30]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|444374274|ref|ZP_21173581.1| cysteinyl-tRNA ligase [Helicobacter pylori A45]
gi|443621498|gb|ELT81937.1| cysteinyl-tRNA ligase [Helicobacter pylori A45]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D+IR +L IALMD + TIW
Sbjct: 431 ERKDFLKADRIREELLNHKIALMDTPQGTIW 461
>gi|417937544|ref|ZP_12580844.1| cysteine--tRNA ligase [Streptococcus infantis SK970]
gi|343391808|gb|EGV04381.1| cysteine--tRNA ligase [Streptococcus infantis SK970]
Length = 447
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
++ +D+F T M +D NT++ +T F + K+IN+ ++ +
Sbjct: 338 LQAFKDKFVTAMDEDFNTANGITVVF-EMAKWINSGNYDAA------------VKEALAA 384
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+L+V G++ + E E+ + ++ LI++R A+ NKDF+ +DQIR
Sbjct: 385 MLEVFGIV-----FVE-------------EVLDEEIEALIQKRQEARANKDFATADQIRD 426
Query: 189 DLTRKGIALMDVRKETIW 206
L +GI L+D + W
Sbjct: 427 QLAAQGIKLLDTKDGVRW 444
>gi|418968031|ref|ZP_13519659.1| cysteine--tRNA ligase [Streptococcus mitis SK616]
gi|383341321|gb|EID19581.1| cysteine--tRNA ligase [Streptococcus mitis SK616]
Length = 447
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + +++++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFTGNVDAQELQTFKDKFVAVMDEDFNSANGITVVFEMAKWINSGNYDAA 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + ++ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEVFGIVFVEEVLDAEIEDLIQKRQEARANRDFATADQIRDQLASQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|152992414|ref|YP_001358135.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
gi|166225309|sp|A6Q8G9.1|SYC_SULNB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151424275|dbj|BAF71778.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLIESLLKIENEVK 127
K + MSDDLN S L A +D + N K PK + L E++ IE +
Sbjct: 339 KAFKQALLNAMSDDLNISIAL--AVIDEMIAETNEKLDTDPKNKALKK-ETIANIEF-ID 394
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALK-RAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+L G P Q D+ALK + E+ L++ER AKK KDF+ SD I
Sbjct: 395 TLLGFGGKEP-----FSYFQIGVDEALKEKIEI-------LLQERTEAKKAKDFATSDAI 442
Query: 187 RADLTRKGIALMDVRKETIW 206
R +L GI++MD + T+W
Sbjct: 443 RNELIDMGISIMDTAEGTVW 462
>gi|433461670|ref|ZP_20419276.1| cysteinyl-tRNA ligase [Halobacillus sp. BAB-2008]
gi|432189842|gb|ELK46907.1| cysteinyl-tRNA ligase [Halobacillus sp. BAB-2008]
Length = 466
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 21/141 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D +K +++F M DD NT++ ++ F D K N Q KQ ++ ++ E+
Sbjct: 345 DKVKGFKEQFIKEMDDDFNTANAISVLF-DMTK-AANLYLQEKQTHEDVLNVFIQTFEEL 402
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
VLGL E + EL + +V LI ER A+K+++F ++DQI
Sbjct: 403 ---TSVLGLSLE----------------VKEELLDEEVDALIAERKQARKDRNFERADQI 443
Query: 187 RADLTRKGIALMDVRKETIWR 207
R +L + I L D + T W+
Sbjct: 444 RDELKARNIILEDTSQGTRWK 464
>gi|392969839|ref|ZP_10335251.1| cysteine--tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
gi|392512127|emb|CCI58447.1| cysteine--tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
Length = 471
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A + I + +F T M+DD NT++ +T A+ D K N + ++IE ++
Sbjct: 345 AYVEAIDDILKQFETVMNDDFNTANAIT-AWYDLAKLANKYILE-NTTSTTVIERFKQV- 401
Query: 124 NEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKS 183
++ DVLG+ +G +L + V LIEER A++NKDF+++
Sbjct: 402 --YEIFSDVLGVPLKGKESDMLLDE--------------QVEALIEERNKARQNKDFARA 445
Query: 184 DQIRADLTRKGIALMD 199
D+IR DL + I L D
Sbjct: 446 DEIRDDLKAQNIILED 461
>gi|329767862|ref|ZP_08259376.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
gi|328838650|gb|EGF88249.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 27/137 (19%)
Query: 74 DEFYTRMSDDLNTSHILTGAFLDALKFINN--SKKQPKQQQLSLIESLLKIENEVKVVLD 131
D+F M DD NT++ L+ ++ + ++ N+ +K+ ++ L LI + +
Sbjct: 351 DKFEEYMQDDFNTANALS-SWYEIVRISNSYTAKETVNKETLELINAAFE---------- 399
Query: 132 VLGLLPEGSTYSEVLQ-QLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADL 190
TYS +L +K+ +E E+ LI ER A+KN+DF+ +D+IR DL
Sbjct: 400 ---------TYSSILGINVKEDNTLDSEHIES----LIAEREAARKNRDFALADKIRDDL 446
Query: 191 TRKGIALMDVRKETIWR 207
+GI L D ++ W+
Sbjct: 447 KEQGIILEDTKQGVRWK 463
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 76 FYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGL 135
F M DD NT L F + + +N SK + I +L + D
Sbjct: 340 FRGVMDDDFNTPEALAIVF-EQISELNRSKDANCAATIKAIGEILNLGQH-----DPESF 393
Query: 136 LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGI 195
L + S+ QL D+A+++ I ERA+A+ NKDF+ SD+IR +L GI
Sbjct: 394 LRWAPSSSD---QLSDEAIEQK----------IAERASARANKDFAASDRIRDELQAAGI 440
Query: 196 ALMDVRKETIWR 207
L D +T WR
Sbjct: 441 VLEDKAGQTTWR 452
>gi|421718504|ref|ZP_16157802.1| cysteine--tRNA ligase [Helicobacter pylori R038b]
gi|407220449|gb|EKE90256.1| cysteine--tRNA ligase [Helicobacter pylori R038b]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D+IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADRIREELLNHKIALMDTPQGTIW 461
>gi|345867565|ref|ZP_08819573.1| cysteinyl-tRNA synthetase [Bizionia argentinensis JUB59]
gi|344047969|gb|EGV43585.1| cysteinyl-tRNA synthetase [Bizionia argentinensis JUB59]
Length = 492
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 68 CIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVK 127
I + Y M+DD NT IL +A+K+IN + +E L N
Sbjct: 367 AISNWKQSCYKAMNDDFNTP-ILIANLFEAVKYINQIHDGSATITATDLELLKNTIN--T 423
Query: 128 VVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIR 187
V DVLGL E + + + + K + E LI+ R A+ NK+F+ SDQIR
Sbjct: 424 FVFDVLGL--------ENVAKEDNSSTKLSGAVE----LLIKLRQEARANKNFALSDQIR 471
Query: 188 ADLTRKGIALMDVRKET 204
+LT GI L D ++ T
Sbjct: 472 NELTELGIQLNDSQEGT 488
>gi|443244025|ref|YP_007377250.1| cysteinyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
gi|442801424|gb|AGC77229.1| cysteinyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
Length = 495
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 19/126 (15%)
Query: 77 YTRMSDDLNTSHILTGAFLDALKFI---NNSKKQPKQQQLSLIESLLKIENEVKVVLDVL 133
Y M+DD NT IL D +K I N+ ++ L + + + D+L
Sbjct: 376 YAAMNDDFNTP-ILVAELFDTVKIIHTINDGNATITKEDLDDLSTSMD-----AFFYDIL 429
Query: 134 GLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRK 193
GL L + D A+K +I+ RATA+ NKD+S SD+IR +L
Sbjct: 430 GLQIAQEETGGSLNKGLDGAMKL----------IIDLRATARANKDWSTSDKIRDELAAA 479
Query: 194 GIALMD 199
GIAL D
Sbjct: 480 GIALKD 485
>gi|423596979|ref|ZP_17572989.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
gi|401218156|gb|EJR24840.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLS--LIESLLKIENEV 126
+++ + F M DD NT++ +T + A N++ + ++ S +IE+ +K ++
Sbjct: 347 MERFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSKVVIEAYVK---QL 399
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ + +LGL L + EL + ++ LI++R A++N+DF+ SDQI
Sbjct: 400 ETLFSILGL-----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQI 442
Query: 187 RADLTRKGIALMDVRKETIWR 207
R DL + I L D + T W+
Sbjct: 443 RDDLKGRNIILEDTAQGTRWK 463
>gi|340356801|ref|ZP_08679442.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339620139|gb|EGQ24710.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 473
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 158 ELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
EL + +V LI+ER A+KN+DF+++D+IR L KGI L D + T W+
Sbjct: 422 ELVDEEVDALIQERLDARKNRDFARADEIRDQLKAKGIVLEDTAQGTRWK 471
>gi|385805765|ref|YP_005842163.1| cysteinyl-tRNA synthetase [Fervidicoccus fontis Kam940]
gi|383795628|gb|AFH42711.1| cysteinyl-tRNA synthetase [Fervidicoccus fontis Kam940]
Length = 475
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 17/136 (12%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
I L EF+ MS+D NT+ + +++A KK + LSL +SL + +E+
Sbjct: 350 IINLHREFHRAMSEDFNTT-LAFKYWMEATSIY--YKKVSNSENLSLFQSLKFLFDEIDR 406
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
V D+L P+ K ++ +ELAE+ + LI+ R ++ ++ +D+IR+
Sbjct: 407 VFDIL---PQ-----------KVRSEGESELAESLIRLLIDVRKALREKGNYELADKIRS 452
Query: 189 DLTRKGIALMDVRKET 204
+L GI LMD ET
Sbjct: 453 ELGNIGIQLMDKGSET 468
>gi|110639787|ref|YP_679997.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|123058501|sp|Q11PK9.1|SYC_CYTH3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110282468|gb|ABG60654.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
Length = 497
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 64 AAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIE 123
A D I K+ + Y MSDD NT+ I + + +K IN Q K + E+ ++
Sbjct: 368 ALNDEINKIIADCYKGMSDDFNTA-ITIASLFNLIKKINVFYLQQKSTAVLSKETFEHMK 426
Query: 124 NE-VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSK 182
+V DVLGL+ E + E L + L++ AK+NK + K
Sbjct: 427 TSYTTLVHDVLGLVDEVAVNPEGL-----------------IKGLLDLYKEAKENKQYDK 469
Query: 183 SDQIRADLTRKGIALMDVRKETIW 206
DQIRA ++G+A+ D++ W
Sbjct: 470 VDQIRAYFKQQGLAIKDMKHGIDW 493
>gi|335030961|ref|ZP_08524430.1| cysteine--tRNA ligase [Streptococcus anginosus SK52 = DSM 20563]
gi|333770770|gb|EGL47763.1| cysteine--tRNA ligase [Streptococcus anginosus SK52 = DSM 20563]
Length = 447
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 98 LKFINNSKKQPKQQQLSLIESLLKIE-------------NEVKVVLDVLGLLPEG----- 139
LK++ N+ +QP ++L E + ++ N + VV ++ + G
Sbjct: 318 LKYLKNTYEQPFTGTVNLTELQVFLDKFTAAMDEDFNAANGITVVFELAKWINSGHYSQE 377
Query: 140 --STYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIAL 197
+ ++E+LQ + E+ + D+ LIE+R A+ KDF+ +D+IR +L KGI L
Sbjct: 378 VKTAFAELLQVFG--IVFTEEVLDADIEALIEQRQAARAAKDFATADKIRDELAAKGIKL 435
Query: 198 MDVRKETIW 206
+D + W
Sbjct: 436 LDTKDGVRW 444
>gi|335054257|ref|ZP_08547077.1| cysteine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|387502751|ref|YP_005943980.1| cysteinyl-tRNA synthetase [Propionibacterium acnes 6609]
gi|333765373|gb|EGL42727.1| cysteine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|335276796|gb|AEH28701.1| cysteinyl-tRNA synthetase [Propionibacterium acnes 6609]
Length = 476
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+L + F T M DDL T + F + K ++ + + LS +V
Sbjct: 348 HELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLS----------QV 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEERATAKKNKDFSKSDQ 185
K +L V GL P+ +++V + R E + ++H ++E+RA A+ KD++ +D
Sbjct: 398 KAMLAVFGLDPQAPEWADVA-----GSDDRLEPVVDGLVHAMLEQRAEARARKDWATADA 452
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR LT G+ + D W
Sbjct: 453 IRDTLTNLGLTIEDTPAGAHW 473
>gi|210135076|ref|YP_002301515.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
gi|226710843|sp|B6JMA7.1|SYC_HELP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|210133044|gb|ACJ08035.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGVKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|126661994|ref|ZP_01732993.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
gi|126625373|gb|EAZ96062.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
Length = 494
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDA--LKFINNSKKQPKQQQLSLIESLLKIENEV 126
I + Y M+DD NT ++ F A + +N+ K+ + + L+++ +
Sbjct: 369 IASWKQSCYDAMNDDFNTPILIAQLFEGARYINLVNDGKESLTTEHIQLLQNTIS----- 423
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
+ DVLGL E S S ++L V LI R A+ NK+F+ SDQI
Sbjct: 424 SFLFDVLGLSNEASGNSNTTEKLSGV-----------VEMLIGMRNEARANKNFALSDQI 472
Query: 187 RADLTRKGIALMDVRKET 204
R L GI L D + T
Sbjct: 473 RDQLLALGIQLKDGKDGT 490
>gi|420494006|ref|ZP_14992575.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-16]
gi|393110807|gb|EJC11331.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-16]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGVKDPSAYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|385249396|ref|YP_005777615.1| cysteinyl-tRNA synthetase [Helicobacter pylori F57]
gi|317182191|dbj|BAJ59975.1| cysteinyl-tRNA synthetase [Helicobacter pylori F57]
Length = 465
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSMNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLKQKIALMDTPQGTIW 461
>gi|257057469|ref|YP_003135301.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256587341|gb|ACU98474.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 69 IKKLRDEFYTRMSDDLNTSH---ILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENE 125
+ ++ EF + DDL T +L D ++++K+ +Q +
Sbjct: 332 VGRVPAEFAAALDDDLGTPQAFAVLHNTVRDGNAALDSAKETEARQ----------LAET 381
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
V+ ++DVLG+ P + +Q ++ AE+ V ++EER A+ N+DF+ +D
Sbjct: 382 VRAMVDVLGIDP-------LSEQWAEQGGAEAEVLARLVDAMLEERQQARANRDFATADA 434
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L GIA+ D W
Sbjct: 435 IRDRLIEAGIAVEDTPNGPQW 455
>gi|329954112|ref|ZP_08295207.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
gi|328528089|gb|EGF55069.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
Length = 491
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 42 LQDCEVALSPFQEDARSG--SITPAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDA 97
LQ E L+ DA G ITP + K LR + Y M+DDLN+ I+ D
Sbjct: 334 LQAAEKGLTRLM-DAVHGLEKITPGKASTVDVKTLRAKCYEAMNDDLNSP-IVIAHLFDG 391
Query: 98 LKFINN---SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKAL 154
+ INN + L ++ + D+LGL + ++ A
Sbjct: 392 ARMINNIIAGNDTITAEDLQELKETFHL-----FCFDILGL-----KEENNSNEEREAAF 441
Query: 155 KRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ V L+EER AK NKD++ SD+IR LT G A+ D + W+
Sbjct: 442 GKV------VDMLLEERIKAKANKDWATSDKIRDKLTALGFAIKDTKDGCEWK 488
>gi|373955985|ref|ZP_09615945.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
gi|373892585|gb|EHQ28482.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
Length = 486
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN---NSKKQPKQQQLSLIESLLKIENE 125
+ +L+ + Y ++DD N S +L + K +N + K + Q L L++++++
Sbjct: 364 VAELQSKCYAAINDDFN-SPVLIAELFEISKIVNSVHDGKLKIDQNNLQLLQNIMQ---- 418
Query: 126 VKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQ 185
V+D+LGL KD+ EL + + +I R+ AKKN D++ SD+
Sbjct: 419 -HFVVDILGL--------------KDEQAANEELPK-VIDFIINLRSEAKKNMDYATSDK 462
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR L + G L D ++ T W
Sbjct: 463 IRIGLQQIGFQLKDSKEGTTW 483
>gi|312869734|ref|ZP_07729881.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
gi|311094783|gb|EFQ53080.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
Length = 471
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 22/107 (20%)
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSE-------VLQQLKDK-----ALKRAELAEND---- 163
+ ++N + VV + L+ +TY++ LQ KDK ++ +L +D
Sbjct: 365 INVQNGIAVVYE---LVKAANTYAQQAAVKQGALQAYKDKLAQLISIFGIKLVAHDNHID 421
Query: 164 ---VLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ LIEER A+KNKDF++SDQIR +L ++GI L D + T ++
Sbjct: 422 DEQIKALIEERNQARKNKDFARSDQIRDELKQQGIILEDTPQGTRYK 468
>gi|50841867|ref|YP_055094.1| cysteinyl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|422456515|ref|ZP_16533179.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|61216186|sp|Q6AAT0.1|SYC_PROAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50839469|gb|AAT82136.1| tRNA synthetase [Propionibacterium acnes KPA171202]
gi|315106472|gb|EFT78448.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
Length = 490
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+L + F T M DDL T + F + K ++ + + LS +V
Sbjct: 362 HELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLS----------QV 411
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEERATAKKNKDFSKSDQ 185
K +L V GL P+ +++V + R E + ++H ++E+RA A+ KD++ +D
Sbjct: 412 KAMLAVFGLDPQAPEWADVA-----GSDDRLEPVVDGLVHAMLEQRAEARARKDWATADA 466
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR LT G+ + D W
Sbjct: 467 IRDTLTNLGLTIEDTPAGAHW 487
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 69 IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKV 128
+ K + + +M DD NT+ ++ F D +K IN S + ++ V+V
Sbjct: 347 LGKYKQRYIEKMDDDFNTADAISVIF-DLVKDINVS---------------INKDSSVEV 390
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRA 188
+ D L L+ E +LQQ K ++ E ++ LIE+R A+ K+++ SD+IR
Sbjct: 391 IRDSLNLIRELGAPLGILQQSKRGSI------EKEIEALIEKRQIARSEKNWALSDKIRD 444
Query: 189 DLTRKGIALMDVRKETIWR 207
DL +GI L D + W+
Sbjct: 445 DLKAQGIVLEDTPEGVRWK 463
>gi|213691306|ref|YP_002321892.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384198421|ref|YP_005584164.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213522767|gb|ACJ51514.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457373|dbj|BAJ67994.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 549
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINN------SKKQPKQQQLSLIESLLKIENEVKV 128
+F M+DD+N S T A A++ N + + + + E+LL V+
Sbjct: 410 DFVAAMNDDVNVSGA-TAAIFTAIRSGNTLLSQLADRADSETAKAEVREALLA----VRA 464
Query: 129 VLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEE----RATAKKNKDFSKS 183
+LD LGL P + A AE E+ L LI E RA A+K KDF K+
Sbjct: 465 MLDTLGLDPLAEPWVSAGVAGG-AADGTAESPEHAALEALIAEQLNARAEARKAKDFVKA 523
Query: 184 DQIRADLTRKGIALMDVRKETIW 206
DQIR LT GIA+ D + + W
Sbjct: 524 DQIRDALTEAGIAIEDGPQGSTW 546
>gi|420432375|ref|ZP_14931390.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-16]
gi|393047534|gb|EJB48508.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-16]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALRG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|228475261|ref|ZP_04059986.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
gi|228270726|gb|EEK12135.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
Length = 466
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 19/134 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + +F M DD NT++ +T A+ D K N + + + + + + +
Sbjct: 343 DQINDILKQFEAVMDDDFNTANAVT-AWYDLSKLAN----KYVLENTTSTQVIQRFKEVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ EG +L + D+ LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLEGKENDVLLDE--------------DIEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMDV 200
R L + I L D
Sbjct: 444 RDTLKEQNIILEDT 457
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 55 DARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAF-----LDALKFINNSKKQPK 109
+++ G P E +K+ + FY +SDD NT L+ + L+ +K S+ +
Sbjct: 336 ESKEGGTHPLYEQ-VKEFEENFYASLSDDFNTPEALSHVYKLVGELNKVKNKAYSEGKIT 394
Query: 110 QQQLSLIESLLK-IENEVKVVLDVL-GLLPEGSTYSEVLQQLKDKALKRAELAENDVLH- 166
++LS E K + N +K + +L L PE ++++ ++ L+ ++ + ++
Sbjct: 395 DRELSAYEFASKSLLNTMKKIFGLLEDLYPECK-----VERVVERELEAGQVFDEKLIQI 449
Query: 167 LIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
LIE R A+K K F +D IR L GI L D T W+
Sbjct: 450 LIEARNIARKEKVFKVADYIRDKLKELGIVLEDTPAGTKWK 490
>gi|420443892|ref|ZP_14942818.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-41]
gi|393059706|gb|EJB60582.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-41]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|340787525|ref|YP_004752990.1| cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
gi|340552792|gb|AEK62167.1| Cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
Length = 473
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 20/134 (14%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLL--- 136
M DD NT ++ A D +N ++ Q +QL K + VLGLL
Sbjct: 352 MDDDFNTPMAIS-ALFDLANEVNKNRSQAAARQL-------------KGLAGVLGLLQRS 397
Query: 137 PEGSTYSEVLQ--QLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
PE L ++ + +A L+E D+L I+ R AK KDFS +D IR +L +G
Sbjct: 398 PEDFLKGRALAGGEVVGNGIAQAALSEQDILLKIQTRQAAKIAKDFSAADLIRKELLAEG 457
Query: 195 IALMDV-RKETIWR 207
I L D +T WR
Sbjct: 458 ILLEDKPGGQTEWR 471
>gi|384897585|ref|YP_005773013.1| cysteinyl-tRNA synthetase [Helicobacter pylori Lithuania75]
gi|317012690|gb|ADU83298.1| cysteinyl-tRNA synthetase [Helicobacter pylori Lithuania75]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GEINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K V ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFVEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|422458564|ref|ZP_16535216.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
gi|315104398|gb|EFT76374.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
Length = 490
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 70 KKLRDEFYTRMSDDLNTSHILTGAF---LDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
+L + F T M DDL T + F + K ++ + + LS +V
Sbjct: 362 HELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLS----------QV 411
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-LIEERATAKKNKDFSKSDQ 185
K +L V GL P+ +++V + R E + ++H ++E+RA A+ KD++ +D
Sbjct: 412 KAMLAVFGLDPQAPEWADVA-----GSDDRLEPVVDGLVHAMLEQRAEARARKDWATADA 466
Query: 186 IRADLTRKGIALMDVRKETIW 206
IR LT G+ + D W
Sbjct: 467 IRDTLTNLGLTIEDTPAGAHW 487
>gi|325656978|gb|ADZ38982.1| CysS, partial [Transformation and cloning vector pVCC]
Length = 171
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 40 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 89
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 90 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 136
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ K+F K+D IR +L ++ IALMD + TIW
Sbjct: 137 EQKNFLKADSIREELLKQKIALMDTPQGTIW 167
>gi|421710397|ref|ZP_16149754.1| cysteine--tRNA ligase [Helicobacter pylori R018c]
gi|421723672|ref|ZP_16162926.1| cysteine--tRNA ligase [Helicobacter pylori R056a]
gi|407210588|gb|EKE80467.1| cysteine--tRNA ligase [Helicobacter pylori R018c]
gi|407224695|gb|EKE94471.1| cysteine--tRNA ligase [Helicobacter pylori R056a]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|420479453|ref|ZP_14978102.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-34]
gi|393095695|gb|EJB96299.1| cysteine--tRNA ligase [Helicobacter pylori Hp H-34]
Length = 465
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|418619627|ref|ZP_13182450.1| cysteine--tRNA ligase [Staphylococcus hominis VCU122]
gi|374824193|gb|EHR88164.1| cysteine--tRNA ligase [Staphylococcus hominis VCU122]
Length = 466
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 19/134 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D I + +F M DD NT++ +T A+ D K N + + + + + + +
Sbjct: 343 DQINDILKQFEAVMDDDFNTANAVT-AWYDLSKLAN----KYVLENTTSTQVIQRFKEVY 397
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
++ DVLG+ EG +L + D+ LIEER A+KNKDF+++D+I
Sbjct: 398 QIFSDVLGVPLEGKENDVLLDE--------------DIEKLIEERNEARKNKDFARADEI 443
Query: 187 RADLTRKGIALMDV 200
R L + I L D
Sbjct: 444 RDTLKEQNIILEDT 457
>gi|417886501|ref|ZP_12530645.1| cysteine--tRNA ligase [Lactobacillus oris F0423]
gi|341592892|gb|EGS35749.1| cysteine--tRNA ligase [Lactobacillus oris F0423]
Length = 471
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 22/107 (20%)
Query: 120 LKIENEVKVVLDVLGLLPEGSTYSE-------VLQQLKDK-----ALKRAELAEND---- 163
+ ++N + VV + L+ +TY++ LQ KDK ++ +L +D
Sbjct: 365 INVQNGIAVVYE---LVKAANTYAQQAAVKQGALQAYKDKLAQLISIFGIKLVAHDNHID 421
Query: 164 ---VLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
+ LIEER A+KNKDF++SDQIR +L ++GI L D + T ++
Sbjct: 422 DEQIKALIEERNQARKNKDFARSDQIRDELKQQGIILEDTPQGTRYK 468
>gi|422861484|ref|ZP_16908124.1| cysteine--tRNA ligase [Streptococcus sanguinis SK330]
gi|327468352|gb|EGF13837.1| cysteine--tRNA ligase [Streptococcus sanguinis SK330]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQ-------------LSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP Q + ++ N + VV ++ + G+ S+
Sbjct: 318 LKYLKNTYEQPFTGQADSAQLQVFLDKFTAAMDEDFNAANGITVVFELAKWINSGNYTSD 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
+ + + E+ + D+ LIEER A+ N+DF+ +D+IR +L +GI L+D
Sbjct: 378 IKAAFAELLEVFGIVFVEEVLDADIERLIEERQVARGNRDFATADRIRDELAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|208434794|ref|YP_002266460.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
gi|226710844|sp|B5Z7P5.1|SYC_HELPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208432723|gb|ACI27594.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|169834403|ref|YP_001694075.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|168996905|gb|ACA37517.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
Length = 457
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 328 LKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDAS 387
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + ++ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 388 VKQALADMLEIFGIVFVEEVLDAEIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLD 447
Query: 200 VRKETIW 206
+ W
Sbjct: 448 TKDGVRW 454
>gi|56808516|ref|ZP_00366253.1| COG0215: Cysteinyl-tRNA synthetase [Streptococcus pyogenes M49 591]
gi|209560085|ref|YP_002286557.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
gi|209541286|gb|ACI61862.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D E+ L + + A E +K+ F M DD NT++ +T F D K+I
Sbjct: 311 IHDAEINLKYLKNTLQQPLTETADEQELKQFVIAFQDAMDDDFNTANGITVVF-DMAKWI 369
Query: 102 NN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N+ S +P +++ + +L V G++ E E+
Sbjct: 370 NSGSYTEP-------------VKSAFEKMLAVFGIIFE------------------EEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E D+ LI +R A+ N+DF+ +D IR L +GI L+D + W
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRW 444
>gi|421721843|ref|ZP_16161117.1| cysteine--tRNA ligase [Helicobacter pylori R055a]
gi|407224304|gb|EKE94081.1| cysteine--tRNA ligase [Helicobacter pylori R055a]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|417968888|ref|ZP_12609860.1| Cysteinyl-tRNA synthetase, partial [Candidatus Arthromitus sp.
SFB-co]
gi|380338789|gb|EIA27644.1| Cysteinyl-tRNA synthetase, partial [Candidatus Arthromitus sp.
SFB-co]
Length = 188
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 67 DCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEV 126
D IKK +F +M DD NTS ++ F + +K+IN + +L ++ES+ KI
Sbjct: 55 DEIKKYYAKFINKMEDDFNTSDAISVIF-EFIKYIN--RFANSFNRLEVMESI-KI---F 107
Query: 127 KVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQI 186
K+ D+ GL + D + L E+D+ ++ +R K+ + F KSD I
Sbjct: 108 KIFFDIFGL------------EYDDNNVDCKNL-EDDIKDMVIQRLEFKQKRQFDKSDLI 154
Query: 187 RADLTRKGIALMDVRKET 204
R++L +KG L D++ T
Sbjct: 155 RSELEKKGYILEDIKGGT 172
>gi|419442091|ref|ZP_13982123.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA13224]
gi|379554615|gb|EHZ19691.1| cysteine--tRNA ligase [Streptococcus pneumoniae GA13224]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQP-------------KQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP K + ++ ++ N + VV ++ + G+ +
Sbjct: 318 LKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDAS 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V Q L D + E+ + ++ LI++R A+ N+DF+ +DQIR L +GI L+D
Sbjct: 378 VKQALADMLEIFGIVFVEEVLDAEIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|417092058|ref|ZP_11956792.1| cysteinyl-tRNA synthetase [Streptococcus suis R61]
gi|353532627|gb|EHC02296.1| cysteinyl-tRNA synthetase [Streptococcus suis R61]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 98 LKFINNSKKQPKQQ---------QLSLIESLL----KIENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ QP Q L+ E+ + N + + D + G+ Y E
Sbjct: 318 LKYLKNTYTQPVQNSVDKSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGN-YDE 376
Query: 145 VLQQLKDKALK------RAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALM 198
+++ K L E+ ++++ LI ER A+ N+DF+ +D+IR +L +GI L+
Sbjct: 377 TVKEAFGKMLAVFGIVFEEEVLDSEIEALIVERQAARANRDFATADRIRDELAAQGIKLL 436
Query: 199 DVRKETIW 206
D + W
Sbjct: 437 DTKDGVRW 444
>gi|420484248|ref|ZP_14982874.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-3]
gi|420514609|ref|ZP_15013080.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-3b]
gi|393101115|gb|EJC01688.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-3]
gi|393156755|gb|EJC57018.1| cysteine--tRNA ligase [Helicobacter pylori Hp P-3b]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GEINP-------NFKKEILECMQDDLNISKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|420423881|ref|ZP_14922951.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-4]
gi|393040139|gb|EJB41159.1| cysteine--tRNA ligase [Helicobacter pylori Hp A-4]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 75 EFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLG 134
+F M DD NT + F + +K +N K QQ L+ L + N LG
Sbjct: 341 KFNEAMDDDFNTPQAMAVLF-ELVKEVN------KTQQPGLVALLQSLANR-------LG 386
Query: 135 LLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKG 194
LL E K + + L ++ + LI ER A+ +K++++SD+IR +L KG
Sbjct: 387 LLTETPQ-----SFFKSQVGQTDGLTDDAIEALIVERTQARADKNWARSDEIRDELLAKG 441
Query: 195 IALMDVRKETIWR 207
+ L+D ++ T WR
Sbjct: 442 VELLDGKEGTSWR 454
>gi|357637356|ref|ZP_09135231.1| cysteine--tRNA ligase [Streptococcus macacae NCTC 11558]
gi|357585810|gb|EHJ53013.1| cysteine--tRNA ligase [Streptococcus macacae NCTC 11558]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 98 LKFINNSKKQPKQQQL------SLIESLLKI-------ENEVKVVLDVLGLLPEGSTYSE 144
LK++ N+ +QP + +L+E ++ N + +V ++ + G+
Sbjct: 318 LKYLKNTYEQPFTSTVDEAEFAALLEKFQEVMDEDFNTANGITIVFEMARWINSGNYNQA 377
Query: 145 VLQQLKD-----KALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMD 199
V +L + + E+ E ++ LIEER A+ KDF+K+D+IR DL +GI L+D
Sbjct: 378 VKDKLAEILQIFGVIFVEEVLEAEIEKLIEERQEARAKKDFAKADRIRDDLAAQGIKLLD 437
Query: 200 VRKETIW 206
+ W
Sbjct: 438 TKDGVRW 444
>gi|221639139|ref|YP_002525401.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
gi|254781691|sp|B9KRV8.1|SYC_RHOSK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221159920|gb|ACM00900.1| Cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
Length = 519
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 80 MSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEG 139
++DDLNT +T ++D L Q + + ++ L + +V ++ LG
Sbjct: 377 LADDLNTPLAVT--YIDGLVSRLRGGIQKQGYVDAEMDDLEMVAKRARVAIEFLGF---- 430
Query: 140 STYSEV--------LQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRADLT 191
T+ ++ L++LK++ L + + L+EERA A+K +DF++SD IR L
Sbjct: 431 -TFDDLEEHHGPVQLKRLKERQLSASADVGVRIGRLLEERAEARKARDFARSDAIRDRLQ 489
Query: 192 RKGIALMDVRKETIW 206
G+ + D R W
Sbjct: 490 AAGVLIKDSRDGATW 504
>gi|27378901|ref|NP_770430.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
gi|61216344|sp|Q89NP8.1|SYC_BRAJA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|27352051|dbj|BAC49055.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
Length = 460
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 130 LDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDFSKSDQIRAD 189
L +LG L SE Q +D+ K + + +V LI ER A+ KDF +SD+IR
Sbjct: 386 LRLLGFL------SESAAQWEDRKQKASGVDAGEVERLISERTAARGRKDFKESDRIRDQ 439
Query: 190 LTRKGIALMDVRKETIW 206
L G+A+ D ++ T W
Sbjct: 440 LAAMGVAIKDSKEGTTW 456
>gi|405979467|ref|ZP_11037810.1| cysteine-tRNA ligase [Actinomyces turicensis ACS-279-V-Col4]
gi|404391883|gb|EJZ86944.1| cysteine-tRNA ligase [Actinomyces turicensis ACS-279-V-Col4]
Length = 486
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 63 PAAEDCI--KKLRDEFYTRMSDDLNTSHILTGAFLDALKFIN------NSKKQPKQQQLS 114
PA+E + +L + F T M DDLN + L + +K N +++ ++QQL
Sbjct: 342 PASEIALPASELPEGFVTAMDDDLNVAGALA-VIYEHMKAGNVAIEAGDTEAVRREQQL- 399
Query: 115 LIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLH-----LIE 169
V+ +LDV+GL P + L ++ E+D L +IE
Sbjct: 400 -----------VRSMLDVIGLDPASEQWRSGLGSAGTAGGAGSD--EHDALDTLVQAVIE 446
Query: 170 ERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
ERA A+ KD++++D +R L GI + D R W+
Sbjct: 447 ERAQARAEKDWARADALRDRLANAGIEVADGRDGATWK 484
>gi|19746854|ref|NP_607990.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
gi|24418689|sp|Q8NZD1.1|SYC_STRP8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|19749094|gb|AAL98489.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes
MGAS8232]
Length = 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 42 LQDCEVALSPFQEDARSGSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFI 101
+ D E+ L + + A E +K+ F M DD NT++ +T F D K+I
Sbjct: 311 IHDAEINLKYLKNTLQQPLTETADEQELKQFVIAFQDAMDDDFNTANGITVVF-DMAKWI 369
Query: 102 NN-SKKQPKQQQLSLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELA 160
N+ S +P +++ + +L V G++ E E+
Sbjct: 370 NSGSYTEP-------------VKSAFEKMLAVFGIIFE------------------EEVL 398
Query: 161 ENDVLHLIEERATAKKNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
E D+ LI +R A+ N+DF+ +D IR L +GI L+D + W
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRW 444
>gi|420417266|ref|ZP_14916370.1| cysteine--tRNA ligase [Helicobacter pylori NQ4044]
gi|393034649|gb|EJB35703.1| cysteine--tRNA ligase [Helicobacter pylori NQ4044]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIESKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L ++ IALMD + TIW
Sbjct: 431 ERKDFLKADSIREELLQQKIALMDTPQGTIW 461
>gi|160883992|ref|ZP_02064995.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
gi|423290684|ref|ZP_17269533.1| cysteinyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
gi|156110722|gb|EDO12467.1| cysteine--tRNA ligase [Bacteroides ovatus ATCC 8483]
gi|392665337|gb|EIY58865.1| cysteinyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
Length = 493
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 61 ITPAAEDC----IKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINN---SKKQPKQQQL 113
ITP++ +K+LR + Y M+DDLNT I+ + + INN + L
Sbjct: 354 ITPSSTTSEGINVKELRAKCYEAMNDDLNTP-IVIAQLFEGARIINNIIAGNATISAEDL 412
Query: 114 SLIESLLKIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERAT 173
++ + D++GL E K + R V L+E+R
Sbjct: 413 KDLKETFHL-----FSFDIMGLKEE-----------KGSSDGREAAYGKVVDMLLEQRMK 456
Query: 174 AKKNKDFSKSDQIRADLTRKGIALMDVRKETIWR 207
AK NKD++ SD+IR LT G + D + WR
Sbjct: 457 AKANKDWATSDEIRNTLTALGFEIKDTKDGFEWR 490
>gi|420410422|ref|ZP_14909565.1| cysteine--tRNA ligase [Helicobacter pylori NQ4200]
gi|393028735|gb|EJB29821.1| cysteine--tRNA ligase [Helicobacter pylori NQ4200]
Length = 465
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 59 GSITPAAEDCIKKLRDEFYTRMSDDLNTSHILTGAFLDALKFINNSK--KQPKQQQLSLI 116
G I P + E M DDLN S L+ L+++ N K + PK + L
Sbjct: 334 GGINP-------NFKKEILECMQDDLNVSKALS--VLESMLSSTNEKLDQNPKNKALKG- 383
Query: 117 ESLLKIENEVKVVLDVLGL-LPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAK 175
+I +K + ++LG+ + S Y + L +E + ++ + IEER AK
Sbjct: 384 ----EILANLKFIEELLGIGFKDPSAYFQ---------LGVSESEKQEIENKIEERKRAK 430
Query: 176 KNKDFSKSDQIRADLTRKGIALMDVRKETIW 206
+ KDF K+D IR +L IALMD + TIW
Sbjct: 431 EQKDFLKADSIREELLNHKIALMDTPQGTIW 461
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 64 AAEDCIKK---LRDEFYTRMSDDLNTSHILTGAFLDALKFINNSKKQPKQQQLSLIESLL 120
A+D KK L +EF M DD NT+ + TG D ++ N ++ E+
Sbjct: 339 GAKDLEKKVLGLMNEFQEAMDDDFNTAKV-TGILFDLVREWNRVLDTKLAVPQAVCEAFF 397
Query: 121 KIENEVKVVLDVLGLLPEGSTYSEVLQQLKDKALKRAELAENDVLHLIEERATAKKNKDF 180
K + VL + G PE + Q + + AE+ ++ I +R A+KNKD+
Sbjct: 398 KNVARISEVLGLFGAKPEDFLNDDKKLQFQSVKIDAAEIEKS-----IADRNMARKNKDW 452
Query: 181 SKSDQIRADLTRKGIALMD 199
K+D IR +L G+ + D
Sbjct: 453 VKADLIRKELKEHGVEIKD 471
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,376,649,237
Number of Sequences: 23463169
Number of extensions: 132634719
Number of successful extensions: 457425
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 1270
Number of HSP's that attempted gapping in prelim test: 453725
Number of HSP's gapped (non-prelim): 3720
length of query: 233
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 95
effective length of database: 9,121,278,045
effective search space: 866521414275
effective search space used: 866521414275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)