Query 037978
Match_columns 124
No_of_seqs 156 out of 1121
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 10:23:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 7.9E-29 2.7E-33 183.0 12.1 110 2-112 114-223 (223)
2 2b6o_A Aquaporin-0, lens fiber 100.0 2.7E-28 9.1E-33 184.0 14.3 111 2-113 116-226 (263)
3 3iyz_A Aquaporin-4; water tran 100.0 2E-28 6.7E-33 189.7 10.8 111 2-113 162-272 (340)
4 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 8.5E-28 2.9E-32 181.5 12.5 111 2-113 118-229 (266)
5 2zz9_A Aquaporin-4; water tran 100.0 6.8E-28 2.3E-32 184.6 11.5 110 2-112 123-232 (301)
6 1j4n_A Aquaporin 1; membrane p 99.9 4.6E-28 1.6E-32 183.4 8.1 111 2-113 126-236 (271)
7 2w2e_A AQY1, aquaporin, aquapo 99.9 3.6E-27 1.2E-31 179.1 12.3 107 4-112 159-266 (279)
8 1ldf_A Glycerol uptake facilit 99.9 4.8E-27 1.7E-31 178.6 10.6 109 4-113 136-258 (281)
9 3cn5_A Aquaporin; membrane pro 99.9 1.6E-27 5.6E-32 182.8 7.0 110 3-113 174-290 (304)
10 2o9g_A Aquaporin Z; integral m 99.9 1.8E-26 6.3E-31 171.4 11.0 100 10-112 131-232 (234)
11 2f2b_A Aquaporin AQPM; protein 99.9 3.8E-26 1.3E-30 170.7 11.5 107 3-111 133-245 (246)
12 3llq_A Aquaporin Z 2; aquapori 99.9 1E-25 3.5E-30 169.2 10.3 98 10-110 154-253 (256)
13 3c02_A Aquaglyceroporin; membr 99.9 5.5E-26 1.9E-30 170.9 5.1 104 9-113 130-245 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.9 4.9E-21 1.7E-25 144.3 11.4 102 11-112 7-110 (263)
15 3llq_A Aquaporin Z 2; aquapori 99.8 2.9E-20 1E-24 139.6 9.1 101 12-112 28-133 (256)
16 3d9s_A Aquaporin-5, AQP-5; aqu 99.8 3.9E-20 1.3E-24 139.6 9.3 102 11-112 9-112 (266)
17 2zz9_A Aquaporin-4; water tran 99.8 8.9E-20 3E-24 139.7 10.5 103 10-112 9-117 (301)
18 2o9g_A Aquaporin Z; integral m 99.8 7.8E-20 2.7E-24 135.7 9.4 100 13-112 4-108 (234)
19 2f2b_A Aquaporin AQPM; protein 99.8 8.8E-20 3E-24 136.2 8.8 102 11-112 2-124 (246)
20 3gd8_A Aquaporin-4; proton exc 99.8 9.5E-20 3.2E-24 134.4 8.3 101 12-112 2-108 (223)
21 3iyz_A Aquaporin-4; water tran 99.8 1.1E-19 3.7E-24 140.8 8.5 101 12-112 50-156 (340)
22 3c02_A Aquaglyceroporin; membr 99.8 9.6E-20 3.3E-24 136.9 7.6 102 11-112 7-112 (258)
23 1j4n_A Aquaporin 1; membrane p 99.8 2.2E-19 7.4E-24 135.8 9.6 101 12-112 9-120 (271)
24 3cn5_A Aquaporin; membrane pro 99.8 2.6E-19 9E-24 137.2 9.6 101 12-112 59-166 (304)
25 2w2e_A AQY1, aquaporin, aquapo 99.8 8.9E-19 3E-23 133.0 12.1 101 12-112 43-154 (279)
26 1ldf_A Glycerol uptake facilit 99.8 1.9E-19 6.4E-24 136.8 8.4 102 11-112 5-110 (281)
27 3s2u_A UDP-N-acetylglucosamine 39.8 2 6.9E-05 32.4 -2.7 21 63-83 9-29 (365)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.96 E-value=7.9e-29 Score=183.01 Aligned_cols=110 Identities=40% Similarity=0.748 Sum_probs=98.8
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
++++.++++.+..++++.|+++||+|++++++. .|+|+.......|+.+|+.+...+...+++||+++|||||||||+.
T Consensus 114 lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~ 192 (223)
T 3gd8_A 114 LGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 192 (223)
T ss_dssp TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred eeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 567788889999999999999999999999987 5655544456789999999988888888999999999999999999
Q ss_pred hcCccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.++|+++|+||++|++|+++++++|++++.|
T Consensus 193 ~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 193 MGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998764
No 2
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.96 E-value=2.7e-28 Score=184.03 Aligned_cols=111 Identities=35% Similarity=0.649 Sum_probs=100.9
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
++.+.++++++..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+..++++.+++||+++||||||||++.
T Consensus 116 ~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 194 (263)
T 2b6o_A 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194 (263)
T ss_dssp CSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHH
T ss_pred cccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHH
Confidence 466778889999999999999999999999987 6655444456899999999999999999999999999999999999
Q ss_pred hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
.+.|+++|+||++|++|+++|+++|++++.++
T Consensus 195 ~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 195 TRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999998763
No 3
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.95 E-value=2e-28 Score=189.70 Aligned_cols=111 Identities=40% Similarity=0.754 Sum_probs=99.1
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
++++.++++.+..++++.|+++||+|++++++. .|+++.......|+.+|+++.+.++.++++||+++||||||||+++
T Consensus 162 lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~ 240 (340)
T 3iyz_A 162 LGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 240 (340)
T ss_pred eeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 456778888999999999999999999999987 5555433345789999999988888888999999999999999999
Q ss_pred hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
.+.|.++|+||+||++|+++|+++|++++.|+
T Consensus 241 ~~~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 241 MGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred ccCCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998763
No 4
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.95 E-value=8.5e-28 Score=181.52 Aligned_cols=111 Identities=38% Similarity=0.638 Sum_probs=99.8
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
.+.+.+.++.+..++++.|+++||+|++++++. .|+++.......|+.+|+++.+.++.++++||+++||||||||+++
T Consensus 118 ~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 196 (266)
T 3d9s_A 118 LAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVV 196 (266)
T ss_dssp TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred eeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 456677788899999999999999999999987 5655543456899999999999999999999999999999999999
Q ss_pred hcCccc-cchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 82 SWTWDN-HWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 82 ~~~~~~-~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
.+.|++ +|+||++|++|+++|+++|++++.++
T Consensus 197 ~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 197 MNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 999998 99999999999999999999998763
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.95 E-value=6.8e-28 Score=184.61 Aligned_cols=110 Identities=40% Similarity=0.763 Sum_probs=98.2
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
.+++.++++.+..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+.+.++..+++||+++|||||||||++
T Consensus 123 ~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~ 201 (301)
T 2zz9_A 123 LGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 201 (301)
T ss_dssp SSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred eeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHH
Confidence 456777888999999999999999999999987 5555443456889999999988888888999999999999999999
Q ss_pred hcCccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.+.|.++|+||++|++|+++|+++|++++.+
T Consensus 202 ~~~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 202 MGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp HCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred hCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999875
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.95 E-value=4.6e-28 Score=183.42 Aligned_cols=111 Identities=38% Similarity=0.703 Sum_probs=98.9
Q ss_pred CCcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 2 TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
++.+.+.++++..++++.|+++||+|++++++. .|+++.....+.|+.+|+.+...++..+++||+++||||||||++.
T Consensus 126 ~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~ 204 (271)
T 1j4n_A 126 LGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 204 (271)
T ss_dssp TTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHH
Confidence 456677888899999999999999999999986 5655433456899999999998888888999999999999999999
Q ss_pred hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 82 SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 82 ~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
.++|+++|+||++|++|+++|+++|++++.++
T Consensus 205 ~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 205 THNFQDHWIFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp TTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred hCCCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998764
No 7
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.95 E-value=3.6e-27 Score=179.11 Aligned_cols=107 Identities=36% Similarity=0.528 Sum_probs=95.1
Q ss_pred cccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc
Q 037978 4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW 83 (124)
Q Consensus 4 ~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~ 83 (124)
++.++++.+..++++.|+++||+|++++++.+.++++ ...+.|+.+|+++..++++.+++||+++|||||||||+..+
T Consensus 159 ~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~ 236 (279)
T 2w2e_A 159 ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR 236 (279)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT
T ss_pred eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc
Confidence 3556667899999999999999999999987544443 34589999999999999999999999999999999999987
Q ss_pred Cc-cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 84 TW-DNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 84 ~~-~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.| .++|+||++|++|+++|+++|++++..
T Consensus 237 ~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 237 SFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 54 689999999999999999999999876
No 8
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.94 E-value=4.8e-27 Score=178.59 Aligned_cols=109 Identities=29% Similarity=0.467 Sum_probs=93.8
Q ss_pred cccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhh
Q 037978 4 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN-IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS 82 (124)
Q Consensus 4 ~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~-~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~ 82 (124)
++.++++.+..++++.|+++||+|++++++. .|+|+.. ...+.|+.+|+++..++++.+++||+++|||||||||+..
T Consensus 136 ~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~ 214 (281)
T 1ldf_A 136 STYPNPHINFVQAFAVEMVITAILMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFA 214 (281)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred eccCCccccHHHHHHHHHHHHHHHHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHH
Confidence 3455667899999999999999999999987 5555432 3468999999999999999999999999999999999985
Q ss_pred c-------Ccc------ccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 83 W-------TWD------NHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 83 ~-------~~~------~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
. .|+ |+|+||++|++|+++|+++|++++.++
T Consensus 215 ~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 215 WLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 1 232 799999999999999999999998653
No 9
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.94 E-value=1.6e-27 Score=182.77 Aligned_cols=110 Identities=43% Similarity=0.719 Sum_probs=96.3
Q ss_pred CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC----chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHH
Q 037978 3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG----IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP 78 (124)
Q Consensus 3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~----~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~ 78 (124)
+.+.+.++.+..++++.|+++||+|+++++.. .|+++...+ .+.|+.+|+++++++++.+++||+++||||||||
T Consensus 174 g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~-~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GP 252 (304)
T 3cn5_A 174 GANSVALGYNKGTALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGA 252 (304)
T ss_dssp TCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-EEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred cccccCCCccHHHHHHHHHHHHHHHHHHHhhe-ecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHH
Confidence 34556778899999999999999999999954 665442222 2889999999999999999999999999999999
Q ss_pred Hhh---hcCccccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 79 AVV---SWTWDNHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 79 ~l~---~~~~~~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
|+. .+.|+++|+||++|++|+++|+++|++++.++
T Consensus 253 al~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 253 AVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp HHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 999 56899999999999999999999999998763
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.94 E-value=1.8e-26 Score=171.39 Aligned_cols=100 Identities=26% Similarity=0.437 Sum_probs=90.8
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcC--ccc
Q 037978 10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDN 87 (124)
Q Consensus 10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~--~~~ 87 (124)
+.+..++++.|+++||+|++++++. .|+|+ .+...|+.+|+.+..+++..+++||+++|||||||||+..++ |++
T Consensus 131 ~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~ 207 (234)
T 2o9g_A 131 GYSMLSALVVELVLSAGFLLVIHGA-TDKFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQ 207 (234)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHH-TSTTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHh-cCCCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCce
Confidence 5789999999999999999999986 56543 345899999999999999999999999999999999999875 559
Q ss_pred cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 88 HWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 88 ~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
+|+||++|++|+++|+++|++++.+
T Consensus 208 ~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 208 LWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eeeeehHHhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999765
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.93 E-value=3.8e-26 Score=170.72 Aligned_cols=107 Identities=36% Similarity=0.542 Sum_probs=94.2
Q ss_pred CcccCCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh-
Q 037978 3 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV- 81 (124)
Q Consensus 3 ~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~- 81 (124)
+++.+.++.+..++++.|+++||+|++++++.+.|+++. ....|+.+|+++..++++.+++||+++||||||||++.
T Consensus 133 ~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~ 210 (246)
T 2f2b_A 133 GATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLND 210 (246)
T ss_dssp GCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred eeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHH
Confidence 456666788999999999999999999999875555442 45789999999999999999999999999999999993
Q ss_pred -h----cCccccchHhhhhhHHHHHHHHHHHHHhc
Q 037978 82 -S----WTWDNHWVYWLGPFIGAAIAAIAYSVAFI 111 (124)
Q Consensus 82 -~----~~~~~~~vy~vap~~Ga~~a~~~~~~~~~ 111 (124)
. ..|.|.|+||++|++|+++|+++|+++++
T Consensus 211 ~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 211 MIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 2 26888999999999999999999999864
No 12
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1e-25 Score=169.25 Aligned_cols=98 Identities=27% Similarity=0.436 Sum_probs=88.7
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhcC--ccc
Q 037978 10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDN 87 (124)
Q Consensus 10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~~--~~~ 87 (124)
..+..++++.|+++||+|++++++. .|+|+. ..+.|+.+|+++..+.++.+++||+++|||||||||+..+. |++
T Consensus 154 ~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~ 230 (256)
T 3llq_A 154 GYSLVSALLIEIILTAFFLIVILGS-THGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQ 230 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccc
Confidence 5689999999999999999999976 566542 45889999999999999999999999999999999998764 669
Q ss_pred cchHhhhhhHHHHHHHHHHHHHh
Q 037978 88 HWVYWLGPFIGAAIAAIAYSVAF 110 (124)
Q Consensus 88 ~~vy~vap~~Ga~~a~~~~~~~~ 110 (124)
+|+||++|++|+++|+++|+++.
T Consensus 231 ~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 231 LWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999985
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.92 E-value=5.5e-26 Score=170.94 Aligned_cols=104 Identities=20% Similarity=0.314 Sum_probs=89.5
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCchH-HHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc---
Q 037978 9 SGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGIIA-PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW--- 83 (124)
Q Consensus 9 ~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~~~~~~-~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~--- 83 (124)
...+..++++.|+++||+|++++++. .|+|+. ....+. |+.+|+++..++++.+++||+++|||||||||+...
T Consensus 130 ~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~ 208 (258)
T 3c02_A 130 PSISLTGAFFNELILTGILLLVILVV-VDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAY 208 (258)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHH-HCHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHH-hCcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccc
Confidence 34566789999999999999999987 454432 234577 999999999999999999999999999999999862
Q ss_pred ---Cc----cccchHhhhhhHHHHHHHHHHHHHhcCC
Q 037978 84 ---TW----DNHWVYWLGPFIGAAIAAIAYSVAFIGP 113 (124)
Q Consensus 84 ---~~----~~~~vy~vap~~Ga~~a~~~~~~~~~~~ 113 (124)
.| .|+|+||++|++|+++|+++|++++.++
T Consensus 209 g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 209 GKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp CTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 34 5799999999999999999999998763
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.85 E-value=4.9e-21 Score=144.32 Aligned_cols=102 Identities=23% Similarity=0.292 Sum_probs=88.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccccc
Q 037978 11 VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH 88 (124)
Q Consensus 11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~ 88 (124)
.+.++.+++|+++||+|+++.++++...+....+ ...++.+|+++++.+++.+++||+|+|||||+++++.++ +|.+.
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 4678999999999999999999886542221111 246789999999999999999999999999999999987 89999
Q ss_pred chHhhhhhHHHHHHHHHHHHHhcC
Q 037978 89 WVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 89 ~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
|+||++|++|+++|+.+.+.++.+
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~ 110 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPP 110 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999875
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=2.9e-20 Score=139.56 Aligned_cols=101 Identities=28% Similarity=0.222 Sum_probs=85.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAVDPKR-G-NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 86 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~-~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~ 86 (124)
+.++.+++|+++|++|+++.++++...+. + ... ...++++|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 56899999999999999999987542111 1 111 245789999999999999999999999999999999987 899
Q ss_pred ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 87 NHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 87 ~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
+...|+++|++|+++|+.+.+.++.+
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999988753
No 16
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.82 E-value=3.9e-20 Score=139.62 Aligned_cols=102 Identities=21% Similarity=0.200 Sum_probs=88.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccccc
Q 037978 11 VGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH 88 (124)
Q Consensus 11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~~ 88 (124)
.+.++.+++|+++|++|+++.++++........+ ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.+.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence 4678999999999999999999886543221111 246789999999999999999999999999999999988 79999
Q ss_pred chHhhhhhHHHHHHHHHHHHHhcC
Q 037978 89 WVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 89 ~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
+.|+++|++|+++|+.+.+.++.+
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999998753
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.81 E-value=8.9e-20 Score=139.67 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=88.6
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-
Q 037978 10 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG---NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW- 83 (124)
Q Consensus 10 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~---~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~- 83 (124)
..+.++.+++||++||+|+++.++++.+.... ... ...++++|+++++.+++++++||+|+|||+|++.++.++
T Consensus 9 ~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~ 88 (301)
T 2zz9_A 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI 88 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCC
Confidence 44689999999999999999999875542211 111 246789999999999999999999999999999999988
Q ss_pred CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 84 TWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 84 ~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 ~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 89 SIAKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 89999999999999999999999988865
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.81 E-value=7.8e-20 Score=135.68 Aligned_cols=100 Identities=23% Similarity=0.176 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cccc
Q 037978 13 AWNAVVFEIVMTFGLVYTVYATAVDPKRG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN 87 (124)
Q Consensus 13 ~~~~~~~E~i~T~~lv~~~~~~~~~~~~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~~ 87 (124)
++|.+++|+++|++|++..++++..++.. ... ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 57899999999999999998875432221 111 236789999999999999999999999999999999988 8999
Q ss_pred cchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 88 HWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 88 ~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
...|+++|++|+++|+.+.+.++.+
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988875
No 19
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.80 E-value=8.8e-20 Score=136.23 Aligned_cols=102 Identities=25% Similarity=0.289 Sum_probs=86.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCC----C-C------CCC-----C----chHHHHHHHHHHHHHHHhcCCCCCCC
Q 037978 11 VGAWNAVVFEIVMTFGLVYTVYATAVDP----K-R------GNI-----G----IIAPIAIGFIVGANILAGGAFDGASM 70 (124)
Q Consensus 11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~----~-~------~~~-----~----~~~~~~igl~v~~~~~~~g~~tG~~l 70 (124)
++.+|.+++|+++|++|++..++++... + . +.. + ...++.+|+++++.+++.+++||+|+
T Consensus 2 ~~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~ 81 (246)
T 2f2b_A 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHI 81 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheeccccccee
Confidence 3678999999999999999988754321 1 0 000 0 12688999999999999999999999
Q ss_pred ChHhhHHHHhhhc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 71 NPAVSFGPAVVSW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 71 NPA~sl~~~l~~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
|||+|++.++.++ +|.+...|+++|++|+++|+.+.+.++++
T Consensus 82 NPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 124 (246)
T 2f2b_A 82 NPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGI 124 (246)
T ss_dssp SHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999999988 89999999999999999999999999876
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.80 E-value=9.5e-20 Score=134.38 Aligned_cols=101 Identities=17% Similarity=0.225 Sum_probs=86.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCC-CC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAVDPK-RG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 85 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~-~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~ 85 (124)
+.+|.+++|+++|++|++..++++.+.. +. +.. ....+.+|+++++.+++.+++||+|+|||+|++.++.++ +|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 4689999999999999999998865421 11 111 246788999999999999999999999999999999987 79
Q ss_pred cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 86 DNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.+...|+++|++|+++|+.+.+.++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999998888654
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.80 E-value=1.1e-19 Score=140.82 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=86.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C--C--CCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Cc
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAVDPKR-G--N--IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 85 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~--~--~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~ 85 (124)
+.++.+++||++||+|+++.++++.+... . . .....++++|+++++.+++++++||+|+|||+|++.++.++ .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 46899999999999999999988654211 1 1 11246789999999999999999999999999999999987 79
Q ss_pred cccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 86 DNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 86 ~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
.+...|+++|++|+++|+.+.+.++.+
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999998888765
No 22
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.80 E-value=9.6e-20 Score=136.90 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=86.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCC-chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978 11 VGAWNAVVFEIVMTFGLVYTVYATAVD--PKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 86 (124)
Q Consensus 11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~~~~-~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~ 86 (124)
.+.++.+++|+++|++|+++.++++.+ +.+...+ ...++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 367899999999999999998876432 1111111 236788999999999999999999999999999999988 899
Q ss_pred ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 87 NHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 87 ~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
+...|+++|++|+++|+.+.+.++++
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 99999999999999999999988765
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.80 E-value=2.2e-19 Score=135.83 Aligned_cols=101 Identities=21% Similarity=0.296 Sum_probs=86.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCC----CchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAVDP------KRGNI----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~------~~~~~----~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
+.++.+++|+++|++|++..++++... ++... ....++++|+++++.+++++++||+|+|||+|++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 578899999999999999988875421 11111 12467899999999999999999999999999999999
Q ss_pred hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 88 79999999999999999999999988754
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.79 E-value=2.6e-19 Score=137.24 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCC--CCC--CCC--chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-C
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAVDP--KRG--NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T 84 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~~~--~~~--~~~--~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~ 84 (124)
+.++.+++||++||+|+++.++++... .++ ... ...++++|+++++.+++++++||+|+|||+|++.++.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 568999999999999999988764421 111 111 246789999999999999999999999999999999988 7
Q ss_pred ccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 85 WDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 85 ~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
|.+...|+++|++|+++|+.+.+.++.+
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999988765
No 25
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.79 E-value=8.9e-19 Score=132.95 Aligned_cols=101 Identities=21% Similarity=0.227 Sum_probs=84.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--CCCC----CCCC----chHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhh
Q 037978 12 GAWNAVVFEIVMTFGLVYTVYATAV--DPKR----GNIG----IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 81 (124)
Q Consensus 12 ~~~~~~~~E~i~T~~lv~~~~~~~~--~~~~----~~~~----~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~ 81 (124)
+.++.+++|+++||+|+++.++++. +... .... ...++++|+++++.+++++++||+|+|||+|++.++.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 5678899999999999999877521 2111 1111 1367899999999999999999999999999999999
Q ss_pred hc-CccccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 82 SW-TWDNHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 82 ~~-~~~~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 154 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPG 154 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 88 89999999999999999999999998865
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.79 E-value=1.9e-19 Score=136.76 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=86.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCchHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHhhhc-Ccc
Q 037978 11 VGAWNAVVFEIVMTFGLVYTVYATAVD---PKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 86 (124)
Q Consensus 11 ~~~~~~~~~E~i~T~~lv~~~~~~~~~---~~~~~~~~~~~~~igl~v~~~~~~~g~~tG~~lNPA~sl~~~l~~~-~~~ 86 (124)
.+.++.+++|+++||+|+++.++++.. ++........++.+|+++++.+++.+++||+|+|||+|++.++.++ +|.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 467899999999999999998875432 1111122246889999999999999999999999999999999988 899
Q ss_pred ccchHhhhhhHHHHHHHHHHHHHhcC
Q 037978 87 NHWVYWLGPFIGAAIAAIAYSVAFIG 112 (124)
Q Consensus 87 ~~~vy~vap~~Ga~~a~~~~~~~~~~ 112 (124)
+...|+++|++|+++|+.+.+.++.+
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998888754
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=39.81 E-value=2 Score=32.39 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=17.0
Q ss_pred cCCCCCCCChHhhHHHHhhhc
Q 037978 63 GAFDGASMNPAVSFGPAVVSW 83 (124)
Q Consensus 63 g~~tG~~lNPA~sl~~~l~~~ 83 (124)
++=||||++||.+++-.+...
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 334889999999999998753
Done!