Your job contains 1 sequence.
>037980
MGKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAEMLIL
CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAVELGHL
AAR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037980
(123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092497 - symbol:AT3G12420 species:3702 "Arabi... 132 1.1e-12 2
TAIR|locus:2092482 - symbol:AT3G12410 species:3702 "Arabi... 132 8.9e-11 2
TAIR|locus:2053519 - symbol:AT2G36110 species:3702 "Arabi... 137 3.6e-09 1
TAIR|locus:2092442 - symbol:AT3G12440 species:3702 "Arabi... 104 1.5e-08 2
TAIR|locus:2092457 - symbol:AT3G12460 species:3702 "Arabi... 105 2.5e-07 2
TAIR|locus:2092507 - symbol:AT3G12430 species:3702 "Arabi... 117 7.0e-07 1
TAIR|locus:2092472 - symbol:AT3G12470 species:3702 "Arabi... 107 7.5e-06 1
TAIR|locus:2095994 - symbol:AT3G62320 species:3702 "Arabi... 95 8.0e-05 1
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe... 100 0.00073 1
>TAIR|locus:2092497 [details] [associations]
symbol:AT3G12420 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR012337 EMBL:CP002686
GO:GO:0003676 GO:GO:0004527 SUPFAM:SSF53098 IPI:IPI01020114
RefSeq:NP_187848.2 UniGene:At.74525 ProteinModelPortal:F4J9R7
EnsemblPlants:AT3G12420.1 GeneID:820421 KEGG:ath:AT3G12420
Uniprot:F4J9R7
Length = 185
Score = 132 (51.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/66 (46%), Positives = 40/66 (60%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTA 114
A+ L LC GN+CLIIQLCH Q+P SL+ FL D F G+ N + D G+ R K
Sbjct: 110 ADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGV-WNSQ-DA-GKL-ARSKHQ 165
Query: 115 VELGHL 120
+E+G L
Sbjct: 166 LEIGKL 171
Score = 49 (22.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 3 KYELDIQGNNVKVTVVDHAALI 24
+Y +D+ GN + VTV A+I
Sbjct: 16 EYSIDVFGNTLSVTVTSDFAII 37
>TAIR|locus:2092482 [details] [associations]
symbol:AT3G12410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 ProtClustDB:CLSN2683821
EMBL:AK176143 IPI:IPI00544772 RefSeq:NP_187847.1 UniGene:At.50891
ProteinModelPortal:Q9LHG7 PRIDE:Q9LHG7 EnsemblPlants:AT3G12410.1
GeneID:820420 KEGG:ath:AT3G12410 TAIR:At3g12410 eggNOG:NOG253679
InParanoid:Q9LHG7 OMA:YNTHLEY PhylomeDB:Q9LHG7
Genevestigator:Q9LHG7 Uniprot:Q9LHG7
Length = 230
Score = 132 (51.5 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDG-LGRCNLRCKT 113
A++L LC GNRCLIIQL + Q+P +L+ FLAD F G+ NG+ G L RC C
Sbjct: 93 ADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFVGV-WNGQDAGKLARC---CHQ 148
Query: 114 AVELGHL 120
+E+G L
Sbjct: 149 -LEIGEL 154
Score = 34 (17.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDD---NIXXXXXXXXRQRLVGIDVKF 47
+Y +D G+ VTV +++I N+ +VG+ V++
Sbjct: 17 EYSVDFFGDEFIVTVTWDSSVISRWIRNVLFNNRFSSHPLVVGVGVQW 64
>TAIR|locus:2053519 [details] [associations]
symbol:AT2G36110 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002685 GO:GO:0016740
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:AC007135 EMBL:AY649245 IPI:IPI00518056 PIR:A84777
RefSeq:NP_181155.1 UniGene:At.37587 ProteinModelPortal:Q9SIH3
SMR:Q9SIH3 PRIDE:Q9SIH3 EnsemblPlants:AT2G36110.1 GeneID:818184
KEGG:ath:AT2G36110 TAIR:At2g36110 InParanoid:Q9SIH3 OMA:FRHQLEI
PhylomeDB:Q9SIH3 ProtClustDB:CLSN2913262 Genevestigator:Q9SIH3
Uniprot:Q9SIH3
Length = 239
Score = 137 (53.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 40 LVGIDVKFNHRCTKKA-EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+VG+DV++ + ++L LC GNRCLIIQL H +IPE L+ FL DETI F G+
Sbjct: 57 VVGLDVQWTPGGSDPPPDILQLCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGV 113
>TAIR|locus:2092442 [details] [associations]
symbol:AT3G12440 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 IPI:IPI00533131
RefSeq:NP_187850.1 UniGene:At.65083 ProteinModelPortal:Q9LHG4
SMR:Q9LHG4 EnsemblPlants:AT3G12440.1 GeneID:820423
KEGG:ath:AT3G12440 TAIR:At3g12440 eggNOG:NOG282953
InParanoid:Q9LHG4 PhylomeDB:Q9LHG4 Genevestigator:Q9LHG4
Uniprot:Q9LHG4
Length = 353
Score = 104 (41.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 50 RCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNL 109
R A L LC GNRC+IIQL + ++P L++FL D F G + L R
Sbjct: 211 RSDPPANTLQLCVGNRCIIIQLFYCNRVPHVLRRFLGDRNHTFVGFWNSQDAGKLKRSRH 270
Query: 110 RCKTA 114
R + A
Sbjct: 271 RLEIA 275
Score = 52 (23.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIXXXXXXXXRQRLVGIDVKF 47
GK+ +D G+ VTV ++I I R +VG+ V++
Sbjct: 15 GKFSVDFFGDEFIVTVTSDPSVIGQWIHDVLRFSSRPLVVGVGVQW 60
>TAIR|locus:2092457 [details] [associations]
symbol:AT3G12460 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 eggNOG:KOG4373 HOGENOM:HOG000152188
ProtClustDB:CLSN2683821 IPI:IPI00526836 RefSeq:NP_187852.1
UniGene:At.50599 ProteinModelPortal:Q9LHG2 DNASU:820425
EnsemblPlants:AT3G12460.1 GeneID:820425 KEGG:ath:AT3G12460
TAIR:At3g12460 InParanoid:Q9LHG2 PhylomeDB:Q9LHG2
Genevestigator:Q9LHG2 Uniprot:Q9LHG2
Length = 242
Score = 105 (42.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
A+ L LC GNRC+IIQL + ++P+ L+ FLAD F G+
Sbjct: 101 ADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFVGI 141
Score = 33 (16.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 3 KYELDIQGNNVKVTVVDHAALI 24
+Y +D G + VTV ++I
Sbjct: 16 RYSVDFFGEELFVTVTPDPSVI 37
>TAIR|locus:2092507 [details] [associations]
symbol:AT3G12430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 SMART:SM00474
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AC069474 IPI:IPI00535476
RefSeq:NP_187849.1 UniGene:At.65082 ProteinModelPortal:Q9C7A5
EnsemblPlants:AT3G12430.1 GeneID:820422 KEGG:ath:AT3G12430
TAIR:At3g12430 eggNOG:KOG4373 HOGENOM:HOG000152188
InParanoid:Q9C7A5 OMA:IIIQLSH PhylomeDB:Q9C7A5
ProtClustDB:CLSN2683821 Genevestigator:Q9C7A5 Uniprot:Q9C7A5
Length = 238
Score = 117 (46.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLG 105
+ R A+ L LC GNRC+IIQL H ++P+ L+ FLAD F G+ + L
Sbjct: 92 RVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVGIWNSQDAGKLK 151
Query: 106 RCNLRCKTAVEL 117
R + AV L
Sbjct: 152 RSKHELEIAVLL 163
>TAIR|locus:2092472 [details] [associations]
symbol:AT3G12470 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
GO:GO:0004527 SUPFAM:SSF53098 EMBL:AP002047 EMBL:AC069474
EMBL:BT025648 IPI:IPI00521942 RefSeq:NP_566424.1 UniGene:At.39591
ProteinModelPortal:Q9LHG1 SMR:Q9LHG1 IntAct:Q9LHG1
EnsemblPlants:AT3G12470.1 GeneID:820426 KEGG:ath:AT3G12470
TAIR:At3g12470 InParanoid:Q9LHG1 OMA:GSRCLII PhylomeDB:Q9LHG1
ProtClustDB:CLSN2914969 Genevestigator:Q9LHG1 Uniprot:Q9LHG1
Length = 220
Score = 107 (42.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIXXXXXXXXRQRL----VGIDVKFNHRCTKK---A 55
K+ +D G+++ VTV A++I I + VGI V++ +
Sbjct: 16 KHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSDPDPPP 75
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAV 115
+ L LC G+RCLIIQL + +P+ L+ FLAD F G+ NG+ + +C+ V
Sbjct: 76 KTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGV-WNGQDQ---KKLEKCRHRV 131
Query: 116 ELGHL 120
E+G L
Sbjct: 132 EIGKL 136
>TAIR|locus:2095994 [details] [associations]
symbol:AT3G62320 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL162507 eggNOG:KOG4373 ProtClustDB:CLSN2684128
IPI:IPI00528255 PIR:T48024 RefSeq:NP_191791.1 UniGene:At.50306
ProteinModelPortal:Q9LZQ8 DNASU:825405 EnsemblPlants:AT3G62320.1
GeneID:825405 KEGG:ath:AT3G62320 TAIR:At3g62320
HOGENOM:HOG000153039 OMA:CNKENAN PhylomeDB:Q9LZQ8
Genevestigator:Q9LZQ8 Uniprot:Q9LZQ8
Length = 171
Score = 95 (38.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 2 GKYELDIQGNNVKVTVVDHAALID-DNIXXXXXXXXRQRLVGIDVKFNHRCTKKAEMLIL 60
G+ + + N+ +T L + +N + +VG D ++ K +L L
Sbjct: 12 GRIRVTVARNDRDITSEVRTFLCNKENANKIIGLDTERSVVGGDSEYPPE--SKLVILEL 69
Query: 61 CAGNRCLIIQLCHL--GQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVEL 117
G CLII L ++ ++P SL FL F G+ +N + L C L CK AV++
Sbjct: 70 SDGQNCLIIPLPYVQGNKLPVSLTNFLNLPDFTFTGVGINKALKMLKSECGLTCKNAVDI 129
Query: 118 G 118
G
Sbjct: 130 G 130
>ZFIN|ZDB-GENE-070702-2 [details] [associations]
symbol:wrn "Werner syndrome" species:7955 "Danio
rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
Length = 1436
Score = 100 (40.3 bits), Expect = 0.00073, P = 0.00073
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 41 VGIDVK----FNHRCTKKAEMLILCAG-NRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
VG D++ F TKK M+ LCA ++C + + + P LK FL DE I G+
Sbjct: 67 VGFDLEWPPSFTKGKTKKVAMVQLCASEDKCYLFHISSMSGFPPGLKMFLEDENIMKVGV 126
Query: 96 EMNG-KVDGLGRCNLRCKTAVELGHLA 121
+ G K L +++ K V+L LA
Sbjct: 127 GIEGDKWKLLSDYDIKLKNIVDLSDLA 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.142 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 123 115 0.00091 102 3 11 22 0.41 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 517 (55 KB)
Total size of DFA: 115 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.88u 0.15s 10.03t Elapsed: 00:00:00
Total cpu time: 9.88u 0.15s 10.03t Elapsed: 00:00:00
Start: Fri May 10 08:10:24 2013 End: Fri May 10 08:10:24 2013