BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037980
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147818277|emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
Length = 219
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLK-RQRLVGIDVKFNH----RCTKKAE 56
KY ++ G ++ T+ D AA++D+ + + ++ + +VG+D+++ + K+
Sbjct: 26 SKYSVNFAGKTIETTLTDKAAIVDEWVQEILSIYAGKPMVVGLDIEWRPNRIPSMSNKSA 85
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAV 115
L LC N+CLI+QL ++ +IP+SLK FL D F G+E+ +D L L C +
Sbjct: 86 TLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSA 145
Query: 116 ELGHLA 121
++ LA
Sbjct: 146 DVRILA 151
>gi|225450559|ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 208
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLK-RQRLVGIDVKFNH----RCTKKAE 56
KY ++ G ++ T+ D AA++D+ + + ++ + +VG+D+++ + K+
Sbjct: 15 SKYSVNFAGKTIETTLTDKAAIVDEWVQEILSIYAGKPMVVGLDIEWRPNRIPSMSNKSA 74
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAV 115
L LC N+CLI+QL ++ +IP+SLK FL D F G+E+ +D L L C +
Sbjct: 75 TLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSA 134
Query: 116 ELGHLA 121
++ LA
Sbjct: 135 DVRILA 140
>gi|147818276|emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera]
Length = 196
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKAL-LKRQRLVGIDVKFN----HRCTKKAE 56
KY + + G ++ T+ D AA+ D+ + + ++ + +VG+D+++ + K+
Sbjct: 18 SKYSVILAGKTIETTLTDKAAIADEWVREILSIHAGKPMVVGLDIEWRPHPIRSMSNKSA 77
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAV 115
L LC ++CLI+QL ++ +IPESLK FLAD F G+E+ + L L C +
Sbjct: 78 TLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLKNEYGLDCSRSA 137
Query: 116 ELGHLA 121
++ LA
Sbjct: 138 DIRDLA 143
>gi|225450557|ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 210
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKAL-LKRQRLVGIDVKFN----HRCTKKAE 56
KY + + G ++ T+ D AA+ D+ + + ++ + +VG+D+++ + K+
Sbjct: 18 SKYSVILAGKTIETTLTDKAAIADEWVREILSIHAGKPMVVGLDIEWRPHPIRSMSNKSA 77
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAV 115
L LC ++CLI+QL ++ +IPESLK FLAD F G+E+ + L L C +
Sbjct: 78 TLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLKNEYGLDCSRSA 137
Query: 116 ELGHLA 121
++ LA
Sbjct: 138 DIRDLA 143
>gi|413947987|gb|AFW80636.1| hypothetical protein ZEAMMB73_312807 [Zea mays]
Length = 214
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKR--QRLVGIDVKF--NHRC--TKKAEMLILCAGNRC 66
+ TV AA+ D+ + ++A R +VG+D ++ N+R T K +L LCAG+RC
Sbjct: 29 IDTTVTRDAAVADEWVRTVRAANPRGAPLIVGLDCEWKPNYRSWTTSKVAILQLCAGDRC 88
Query: 67 LIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVEL 117
L++QL ++ +IP S++ FLAD + F G+ + L L C + VEL
Sbjct: 89 LVLQLFYVDRIPASIRSFLADPDVFFVGIGVGEDAAKLATDYGLTCASPVEL 140
>gi|21805698|gb|AAM76756.1| hypothetical protein [Arabidopsis thaliana]
Length = 239
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 LDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRCT-KKAEMLI 59
+D G + VTV + I I +++ R R +VG+DV++ + ++L
Sbjct: 19 IDFFGERLIVTVTHTTSTIRRWIHSIR-FFSRLRSSHPLVVGLDVQWTPGGSDPPPDILQ 77
Query: 60 LCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
LC GNRCLIIQL H +IPE L+ FL DETI F G+
Sbjct: 78 LCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGV 113
>gi|351727341|ref|NP_001238437.1| uncharacterized protein LOC100527339 [Glycine max]
gi|255632121|gb|ACU16413.1| unknown [Glycine max]
Length = 208
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLK-RQRLVGIDVKFN--HRCTKKAEMLIL 60
Y + G ++ T+ D + ++D I + + +QR+VG+D ++ + K +L L
Sbjct: 20 YLVSCDGLTIETTITDKSGIVDKWIQVVSSTYAGKQRIVGLDTEWTTAKKPKMKVAILQL 79
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
C N+CLIIQL H+ IP+SL+ FL D F G+
Sbjct: 80 CIENKCLIIQLFHMDNIPQSLRSFLMDSNFEFVGV 114
>gi|15227581|ref|NP_181155.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
gi|4678223|gb|AAD26968.1| hypothetical protein [Arabidopsis thaliana]
gi|50058835|gb|AAT69162.1| hypothetical protein At2g36110 [Arabidopsis thaliana]
gi|330254113|gb|AEC09207.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 239
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 LDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRCT-KKAEMLI 59
+D G + VTV + I I +++ R R +VG+DV++ + ++L
Sbjct: 19 IDFFGERLIVTVTHTTSTIRRWIHSIR-FFSRLRSSHPLVVGLDVQWTPGGSDPPPDILQ 77
Query: 60 LCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
LC GNRCLIIQL H +IPE L+ FL DETI F G+
Sbjct: 78 LCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGV 113
>gi|226503994|ref|NP_001150086.1| LOC100283715 [Zea mays]
gi|195636594|gb|ACG37765.1| 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 8 IQGNNVKVTVVDHAALIDDNIAALKALLKR---QRLVGIDVKFN---HRCTKKAEMLILC 61
+GN + TV A ++ + + ++ +R + +VG+DV++ R K +L LC
Sbjct: 11 FEGNVITTTVTASGAAVESWLDEILSVHRRRLHKLVVGLDVEWRPSFSRAYSKTAILQLC 70
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGHL 120
G RCLI QL H +P +L +FL+D F G+ + V+ L +L A +L L
Sbjct: 71 VGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVGVAADVERLENDYDLEVANAEDLAEL 130
Query: 121 AAR 123
AA+
Sbjct: 131 AAK 133
>gi|242057157|ref|XP_002457724.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
gi|241929699|gb|EES02844.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
Length = 183
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKR--QRLVGIDVKF--NHRC--TKKAEMLILCAGNRC 66
+ TV AA+ DD + ++A R + +VG+D ++ N+R T K +L LCAG RC
Sbjct: 2 IDTTVTRDAAVADDWVRTVRAANPRGARLIVGLDCEWKPNYRSWTTSKVAILQLCAGTRC 61
Query: 67 LIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVEL 117
L++QL ++ ++P S++ FLAD + F G+ + V L L C V+L
Sbjct: 62 LVLQLLYVDRVPASVRSFLADPDVLFVGIGVGEDVAKLDADYGLTCAAHVDL 113
>gi|414881130|tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 8 IQGNNVKVTVVDHAALIDDNIAALKALLKR---QRLVGIDVKFN---HRCTKKAEMLILC 61
+GN + TV A ++ + + ++ +R + +VG+DV++ R K +L LC
Sbjct: 11 FEGNVITTTVTASGAAVESWLDEILSVHRRRLHKLVVGLDVEWRPSFSRAYSKTAILQLC 70
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGHL 120
G RCLI QL H +P +L +FL+D F G+ + V+ L +L A +L L
Sbjct: 71 VGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVGVAADVERLENDYDLEVANAEDLAEL 130
Query: 121 AAR 123
AA+
Sbjct: 131 AAK 133
>gi|3298537|gb|AAC25931.1| hypothetical protein [Arabidopsis thaliana]
Length = 217
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 6 LDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL-----VGIDVKFNHRCT-KKAEMLI 59
+D G + VTV ++I I +++ + R RL VG+ V++ R + ++L
Sbjct: 28 VDFFGERLIVTVTHTPSVIRRWIHSIR-FVSRLRLSHPLVVGLGVQWTPRGSDPPPDILQ 86
Query: 60 LCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
LC G RCLIIQL H +P+ L+ FL D+TI F G+ + D L R
Sbjct: 87 LCVGTRCLIIQLSHCKYVPDVLRSFLEDQTITFVGVWNSQDKDKLER 133
>gi|125527633|gb|EAY75747.1| hypothetical protein OsI_03660 [Oryza sativa Indica Group]
Length = 208
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFNHRC----TKK 54
G Y + + + TV D ++D + + + R+ +VG+DV++N
Sbjct: 12 GTYTVAFDEDKIYTTVTDSGEEVEDWLDEIVRIHHRRLDHLIVGLDVEWNPASGFCAPGP 71
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCL+ Q+ H +P+ L FL D F G+ ++ VD L +L +
Sbjct: 72 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKLREHYDLEVEN 131
Query: 114 AVELGHLAAR 123
AV+L +LAA+
Sbjct: 132 AVDLRYLAAQ 141
>gi|238479745|ref|NP_187848.2| DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|332641674|gb|AEE75195.1| DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 185
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 46/160 (28%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAAL-----KALLKRQRLVGIDVKF---------- 47
+Y +D+ GN + VTV A+I I + + + +VG+ V++
Sbjct: 16 EYSIDVFGNTLSVTVTSDFAIISQWIHEVEYNNCRPYYLQPLVVGVGVQWTPPVSYDANP 75
Query: 48 ---------------------------NHRCTKKAEMLILCAGNRCLIIQLCHLGQIPES 80
+H A+ L LC GN+CLIIQLCH Q+P S
Sbjct: 76 PPDRYYSDHHPPRSYDPNPPPNRYYSDHHPPHPPADTLQLCVGNQCLIIQLCHCDQVPTS 135
Query: 81 LKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAVELGHL 120
L+ FL D F G+ + L R K +E+G L
Sbjct: 136 LRSFLTDPNTTFVGVWNSQDAGKLA----RSKHQLEIGKL 171
>gi|147777289|emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
Length = 208
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 16 TVVDHAALIDDNIAALKALLKRQRL----VGIDVKF---NHRCTKKAEMLILCAGNRCLI 68
T+V H + D+ + R RL VG+D+++ N R T +L LC G RCLI
Sbjct: 26 TLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWRPNNARYTNPVAILQLCVGRRCLI 85
Query: 69 IQLCHLGQIPESLKKFLADETICFAGMEMNGKVDG-LGRCNLRCKTAVELGHLAAR 123
QL + +IP SL FL D F G+ + L NLR V+L LAAR
Sbjct: 86 FQLLYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAAR 141
>gi|297741701|emb|CBI32833.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 16 TVVDHAALIDDNIAALKALLKRQRL----VGIDVKF---NHRCTKKAEMLILCAGNRCLI 68
T+V H + D+ + R RL VG+D+++ N R T +L LC G RCLI
Sbjct: 26 TLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWRPNNARYTNPVAILQLCVGRRCLI 85
Query: 69 IQLCHLGQIPESLKKFLADETICFAGMEMNGKVDG-LGRCNLRCKTAVELGHLAAR 123
QL + +IP SL FL D F G+ + L NLR V+L LAAR
Sbjct: 86 FQLLYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAAR 141
>gi|307136028|gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]
Length = 209
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 21 AALIDDNIAALKALLKRQRLVGIDVKF---NHRCTKKAEMLILCAGNRCLIIQLCHLGQI 77
+++DD I+ + LVG+D+++ N L LC G RCLI+QL H+ +I
Sbjct: 36 PSMVDDWISQTLTIQTPPLLVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLLHIPEI 95
Query: 78 PESLKKFLADETICFAGMEMNGKVDGL 104
P+SL +FL +E+ F G+ ++ + L
Sbjct: 96 PKSLFEFLENESFTFVGVGIDEDAEKL 122
>gi|326498999|dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 212
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 10 GNNVKVTVVDH-----AALIDDNIAALKALLKRQR----------LVGIDVKFNH---RC 51
+ VTVVD A + + A+KA L++ R +VG+DV++ R
Sbjct: 2 ATDTFVTVVDFEDDEITATVTSSGDAVKAWLRQIRYVYRWVYHKLIVGLDVEWRPSFGRA 61
Query: 52 TKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCN-LR 110
+L LC G RCLI QL H IP +L++FLAD F G+ + VD L + L
Sbjct: 62 QNPVALLQLCVGRRCLIFQLLHADFIPLALRRFLADPDFRFVGVGVQNDVDRLNDDHGLE 121
Query: 111 CKTAVELGHLAA 122
V+L LAA
Sbjct: 122 VANVVDLRSLAA 133
>gi|15795161|dbj|BAB03149.1| unnamed protein product [Arabidopsis thaliana]
Length = 249
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCK 112
A+ L LC GN+CLIIQLCH Q+P SL+ FL D F G+ + L R K
Sbjct: 182 PPADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGVWNSQDAGKLA----RSK 237
Query: 113 TAVELGHL 120
+E+G L
Sbjct: 238 HQLEIGKL 245
>gi|297597578|ref|NP_001044182.2| Os01g0737700 [Oryza sativa Japonica Group]
gi|255673666|dbj|BAF06096.2| Os01g0737700 [Oryza sativa Japonica Group]
Length = 233
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFNHRC----TKK 54
G Y + + + TV D +++ + + + R+ +VG+DV++N
Sbjct: 37 GTYTVAFDEDKIYTTVTDSGEEVEEWLDEIVRIHHRRLDHLIVGLDVEWNPASGFCALGP 96
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCL+ Q+ H +P+ L FL D F G+ ++ VD L +L +
Sbjct: 97 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKLREHYDLEVEN 156
Query: 114 AVELGHLAAR 123
AV+L +LAA+
Sbjct: 157 AVDLRYLAAQ 166
>gi|125571950|gb|EAZ13465.1| hypothetical protein OsJ_03382 [Oryza sativa Japonica Group]
Length = 287
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFNHRCT----KK 54
G Y + + + TV D +++ + + + R+ +VG+DV++N
Sbjct: 91 GTYTVAFDEDKIYTTVTDSGEEVEEWLDEIVRIHHRRLDHLIVGLDVEWNPASGFCALGP 150
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCL+ Q+ H +P+ L FL D F G+ ++ VD L +L +
Sbjct: 151 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKLREHYDLEVEN 210
Query: 114 AVELGHLAAR 123
AV+L +LAA+
Sbjct: 211 AVDLRYLAAQ 220
>gi|125527632|gb|EAY75746.1| hypothetical protein OsI_03659 [Oryza sativa Indica Group]
Length = 208
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFN----HRCTKK 54
G Y + + + TV +DD + + + +R+ +VG+DV++ +
Sbjct: 12 GTYTVAFDEDYIHTTVTYSGDDVDDWLDEILRIHRRRLNYLVVGLDVEWRPATYYHGPGP 71
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCLI Q+ H +P+SL FLAD F G+ ++ V L L +
Sbjct: 72 VAVLQICVGRRCLIFQILHADYVPDSLFDFLADGRFTFVGVGIHDDVAKLRSHHELEVEN 131
Query: 114 AVELGHLAAR 123
AV+L +LAA+
Sbjct: 132 AVDLRYLAAQ 141
>gi|12321961|gb|AAG51018.1|AC069474_17 hypothetical protein; 78912-79874 [Arabidopsis thaliana]
Length = 308
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCK 112
A+ L LC GN+CLIIQLCH Q+P SL+ FL D F G+ + L R K
Sbjct: 182 PPADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGVWNSQDAGKLA----RSK 237
Query: 113 TAVELGHL 120
+E+G L
Sbjct: 238 HQLEIGKL 245
>gi|357442197|ref|XP_003591376.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355480424|gb|AES61627.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 179
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 8 IQGNNVKVTVVDHAALIDDNIAAL--KALLKRQRLVGIDVKFNHRCTKKAE--------- 56
+ G ++K TV + +D+ + + A +++G DV+ + K +E
Sbjct: 9 LNGVHIKTTVTNKQQEVDNLLWSFLRPANYNGPKVIGFDVELSMFENKVSEEEIYDNSEC 68
Query: 57 -MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTA 114
L LC G CLIIQLCHL +P SL FL F + + + L + +RC+ A
Sbjct: 69 ATLHLCNGQLCLIIQLCHLDSVPTSLLNFLRLPDYTFVSVGIKDDLAKLKKEYGIRCRNA 128
Query: 115 VELGHLAA 122
VELG LAA
Sbjct: 129 VELGPLAA 136
>gi|57900570|dbj|BAD87022.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 327
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFNHRCT----KK 54
G Y + + + TV D +++ + + + R+ +VG+DV++N
Sbjct: 131 GTYTVAFDEDKIYTTVTDSGEEVEEWLDEIVRIHHRRLDHLIVGLDVEWNPASGFCALGP 190
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCL+ Q+ H +P+ L FL D F G+ ++ VD L +L +
Sbjct: 191 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKLREHYDLEVEN 250
Query: 114 AVELGHLAAR 123
AV+L +LAA+
Sbjct: 251 AVDLRYLAAQ 260
>gi|449437715|ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506001|ref|XP_004162625.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 209
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 21 AALIDDNIAALKALLKRQRLVGIDVKF---NHRCTKKAEMLILCAGNRCLIIQLCHLGQI 77
+++D I+ A+ LVG+D+++ N L LC G RCLI+QL H+ +I
Sbjct: 36 PSMVDGWISQTLAIQTPPLLVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLLHMPEI 95
Query: 78 PESLKKFLADETICFAGMEMNGKVDGL 104
P+SL +FL +E+ F G+ ++ + L
Sbjct: 96 PKSLFEFLENESFTFVGVGIDEDAEKL 122
>gi|449437986|ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506025|ref|XP_004162631.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 210
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 40 LVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+VG+DV+ F+ L LC G RCLI QL H + P+SL FL D+T F G+
Sbjct: 58 VVGLDVEWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHASETPQSLIDFLEDDTFTFVGV 117
Query: 96 EMNGKVDGL-GRCNLRCKTAVELGHLAA 122
++ V L +L V+L LAA
Sbjct: 118 GIDNDVLKLYNDYDLNVANTVDLRELAA 145
>gi|168037523|ref|XP_001771253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677494|gb|EDQ63964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 5 ELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQ--RLVGIDVKFNHRCTKKAE----ML 58
E+ + G + VT A+ +A LKRQ ++ G+D ++ K E +L
Sbjct: 6 EIHVAGKKIVVTNTKEGAVA-------QAWLKRQIGKVFGLDAEWRPSFRKGVEHKIALL 58
Query: 59 ILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVEL 117
+C + CLI+Q+ +L IP L FL D +I F G+ + G L R L C A++L
Sbjct: 59 QICGEDDCLIVQMLYLDSIPTELVNFLKDPSIKFPGVGIKGDALKLKRDWGLECNGAIDL 118
Query: 118 GHLAA 122
LAA
Sbjct: 119 TTLAA 123
>gi|15230479|ref|NP_187847.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321965|gb|AAG51022.1|AC069474_21 hypothetical protein; 80835-81527 [Arabidopsis thaliana]
gi|15795160|dbj|BAB03148.1| unnamed protein product [Arabidopsis thaliana]
gi|51970428|dbj|BAD43906.1| hypothetical protein [Arabidopsis thaliana]
gi|332641673|gb|AEE75194.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 230
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDD---NIAALKALLKRQRLVGIDVKFN----------- 48
+Y +D G+ VTV +++I N+ +VG+ V++
Sbjct: 17 EYSVDFFGDEFIVTVTWDSSVISRWIRNVLFNNRFSSHPLVVGVGVQWTPFSYYSDPRPN 76
Query: 49 ----------HRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMN 98
+ A++L LC GNRCLIIQL + Q+P +L+ FLAD F G+ N
Sbjct: 77 NYYADPPPIRYYSDNPADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFVGV-WN 135
Query: 99 GKVDG-LGRC 107
G+ G L RC
Sbjct: 136 GQDAGKLARC 145
>gi|225440183|ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
Length = 213
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL----VGIDVK----FNHRCTKKA 55
YE+ G++V+ V + ++D I +++ L VG+DV+ FN +
Sbjct: 18 YEVIFFGDSVQTLVTNTPNIVDSWIQNVESSNPHNGLDRLIVGLDVEWRPSFNPQIENPV 77
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTA 114
L LC G CLI QL H IP SL FL + F G+ ++ ++ L G L A
Sbjct: 78 ATLQLCVGRSCLIFQLLHAPAIPASLNAFLRNPGYTFVGVGIDDDLEKLVGDHGLGVSNA 137
Query: 115 VELGHLAA 122
V+L LAA
Sbjct: 138 VDLRGLAA 145
>gi|125571460|gb|EAZ12975.1| hypothetical protein OsJ_02895 [Oryza sativa Japonica Group]
Length = 357
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 40 LVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICF 92
+VGID ++ N + K +L LC G RCL+ Q+ G +P L +FLAD ++ F
Sbjct: 193 IVGIDTEWRTDHLPNGKTCYKVAVLQLCVGRRCLLFQIYQAGNMVPHELAEFLADPSVRF 252
Query: 93 AGMEMNGKVDGLGR-CNLRCKTAVELGHLAA 122
G+ +N + L CNLR AV+L + AA
Sbjct: 253 VGVAVNNDMQRLANDCNLRVACAVDLRYAAA 283
>gi|297597576|ref|NP_001044181.2| Os01g0737600 [Oryza sativa Japonica Group]
gi|57900569|dbj|BAD87021.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125571949|gb|EAZ13464.1| hypothetical protein OsJ_03381 [Oryza sativa Japonica Group]
gi|255673665|dbj|BAF06095.2| Os01g0737600 [Oryza sativa Japonica Group]
Length = 208
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---LVGIDVKFN----HRCTKK 54
G Y + + + TV +DD + + + +R+ +VG+DV++ +
Sbjct: 12 GTYTVAFDEDYIHTTVTYSGDDVDDWLDEILRIHRRRLNYLVVGLDVEWRPATYYHGPGP 71
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKT 113
+L +C G RCLI Q+ H +P+SL FLAD F G+ ++ V L L +
Sbjct: 72 VAVLQICVGRRCLIFQILHADYVPDSLFDFLADGRFTFVGVGIHDDVAKLRSHHGLEVEN 131
Query: 114 AVELGHLAAR 123
V+L +LAA+
Sbjct: 132 VVDLRYLAAQ 141
>gi|242054357|ref|XP_002456324.1| hypothetical protein SORBIDRAFT_03g033990 [Sorghum bicolor]
gi|241928299|gb|EES01444.1| hypothetical protein SORBIDRAFT_03g033990 [Sorghum bicolor]
Length = 165
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQ--RLV-GIDVKFNHRCTK----K 54
G+Y + +++ T+ D ++D + + + +R+ RLV G+DV++ ++
Sbjct: 13 GRYMVFFDDDSILTTLTDSGDVVDSWLDEIYRIHRRRLKRLVVGLDVEWRPSYSRYDAPP 72
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKV 101
+L +C +RCL+ Q+ H +P++L FLAD+ + F G+ ++G V
Sbjct: 73 VAVLQMCVDHRCLVFQILHADYLPDALFDFLADDRLTFVGVGIHGDV 119
>gi|55773858|dbj|BAD72396.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773956|dbj|BAD72483.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 298
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 40 LVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICF 92
+VGID ++ N + K +L LC G RCL+ Q+ G +P L +FLAD ++ F
Sbjct: 134 IVGIDTEWRTDHLPNGKTCYKVAVLQLCVGRRCLLFQIYQAGNMVPHELAEFLADPSVRF 193
Query: 93 AGMEMNGKVDGLGR-CNLRCKTAVELGHLAA 122
G+ +N + L CNLR AV+L + AA
Sbjct: 194 VGVAVNNDMQRLANDCNLRVACAVDLRYAAA 224
>gi|125527138|gb|EAY75252.1| hypothetical protein OsI_03140 [Oryza sativa Indica Group]
Length = 357
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 40 LVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICF 92
+VGID ++ + + K +L LC G RCL+ Q+ G +P L +FLAD ++ F
Sbjct: 193 IVGIDTEWRTDHLPDGKTCYKVAVLQLCVGRRCLVFQIYQAGNMVPHELAEFLADPSVRF 252
Query: 93 AGMEMNGKVDGLGR-CNLRCKTAVELGHLAA 122
G+ +N + L CNLR AV+L + AA
Sbjct: 253 VGVAVNNDMQRLANDCNLRVACAVDLRYAAA 283
>gi|414881022|tpg|DAA58153.1| TPA: hypothetical protein ZEAMMB73_889185 [Zea mays]
Length = 132
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL- 104
F+ +KKA +L LC G RCLI QL H +P +L +FL+D F G+ M V+ L
Sbjct: 12 SFSRAYSKKA-ILQLCVGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVGMAADVEQLE 70
Query: 105 GRCNLRCKTAVELGHLAAR 123
+L A +L L A+
Sbjct: 71 NDYDLEVANAEDLAELTAK 89
>gi|242054353|ref|XP_002456322.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
gi|241928297|gb|EES01442.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
Length = 208
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 2 GKYELDIQGNNVKVTVVDHAALID---DNIAALKALLKRQRLVGIDVKFNHRCT-----K 53
G + + + + T+ D A +D D I + + +VGIDV++ T
Sbjct: 11 GHFVVWFDEDAIHTTLTDSGAAVDSWLDEIRRVHRRRLNRLIVGIDVEWRPSRTTTNHVP 70
Query: 54 KAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+L +C G RCL+ ++ H +P+SL FLAD+ F G+
Sbjct: 71 PVALLQICVGRRCLVFKILHADYVPQSLSDFLADQRFAFVGV 112
>gi|297834040|ref|XP_002884902.1| hypothetical protein ARALYDRAFT_478600 [Arabidopsis lyrata subsp.
lyrata]
gi|297330742|gb|EFH61161.1| hypothetical protein ARALYDRAFT_478600 [Arabidopsis lyrata subsp.
lyrata]
Length = 230
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAAL---KALLKRQRLVGIDVKFN----------- 48
+Y +D G+ + VTV +++I I + +VG+ V++
Sbjct: 17 EYSVDFFGDELIVTVTPDSSVISRWIRDVLFNNRFSSHPLVVGVGVQWTPFYYYADPLEN 76
Query: 49 ----------HRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMN 98
+ A++L LC GNRCLIIQL + Q+P +L+ FL D F G+ N
Sbjct: 77 DYYADAPAGRNYSDNPADILQLCVGNRCLIIQLGYCEQVPNNLRSFLGDPETTFVGV-WN 135
Query: 99 GKVDG-LGRC 107
G+ G L RC
Sbjct: 136 GQDAGKLARC 145
>gi|357130643|ref|XP_003566957.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 201
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 5 ELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFN-HRCTKK--AEMLILC 61
++ + N + TV ++ + +++ L +VG+DV++ RC+ + +L LC
Sbjct: 9 DVTFEENVIITTVTSSGVAVEGWLREIRSFLG-DLVVGLDVEWRPSRCSSQNPVALLQLC 67
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCN-LRCKTAVELGHL 120
G+RCLI QL H +P +L +FLAD + F G+ + V+ L + L A +L L
Sbjct: 68 VGHRCLIFQLLHADFVPPALSEFLADLNVRFVGVGVQDDVERLSDDHELNVANAKDLREL 127
Query: 121 AA 122
AA
Sbjct: 128 AA 129
>gi|357130647|ref|XP_003566959.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 194
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 8 IQGNNVKVTVVDHAALIDDNIAALKALLKR---QRLVGIDVKFN---HRCTKKAEMLILC 61
+G + TV ++D I + + R + +VG+DV++ R + +L LC
Sbjct: 12 FEGYVITATVTSSGKAVEDWIQEIYSSYHRLLHKLIVGLDVEWRPSYSRVQNRVALLQLC 71
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
G CLI QL H IPE+L++FL D F + + D L +
Sbjct: 72 VGRHCLIFQLLHADYIPEALEEFLDDPDFRFVDVGVQDDADRLSQ 116
>gi|242057613|ref|XP_002457952.1| hypothetical protein SORBIDRAFT_03g023091 [Sorghum bicolor]
gi|241929927|gb|EES03072.1| hypothetical protein SORBIDRAFT_03g023091 [Sorghum bicolor]
Length = 547
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 40 LVGIDVKFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNG 99
+VG+D ++ KK ++ +C G +CL+ ++ H G IP+ LK FLADE F G+ +
Sbjct: 279 IVGLDTEWFESDRKKIALIQICVGKKCLLFKVGHAGIIPDDLKSFLADENHVFVGVAIAN 338
Query: 100 KVDGL 104
+D L
Sbjct: 339 DLDRL 343
>gi|224117124|ref|XP_002317483.1| predicted protein [Populus trichocarpa]
gi|222860548|gb|EEE98095.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 5 ELDIQGNNVKVTVVDHAALID---DNIAALKALLKRQRLVGIDVKFNHRCT----KKAEM 57
+++ G+++ TV A+ +D D I + + ++G+D ++ +K +
Sbjct: 7 DVEYYGDHIFTTVTKSASAVDRWIDQIMYVYQSKLSKLIIGLDTEWFLPAYPGDYQKIAI 66
Query: 58 LILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
L LC G RCLI QLCH P SL FL +E F G E+
Sbjct: 67 LQLCVGRRCLIFQLCHADYFPRSLIDFLGNEKYTFVGKEV 106
>gi|297823419|ref|XP_002879592.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325431|gb|EFH55851.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
++L LC G RCLIIQL H ++P+ L+ FL DETI F G+ + D L R
Sbjct: 7 PPPDILQLCVGTRCLIIQLSHCKRMPDVLRSFLEDETITFVGVWNSQDKDNLER 60
>gi|224139642|ref|XP_002323207.1| predicted protein [Populus trichocarpa]
gi|222867837|gb|EEF04968.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALL-------KRQRLVGIDVKFN----HRCT 52
Y++ + + V ++ ++ IA + L R +VG+DV++ R
Sbjct: 18 YDVKFFDDRIHTLVTHTSSFVNTWIAETQQKLLQNNNHAHRPLIVGLDVEWRPNRFRRIE 77
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICFAGMEMNGKVDGLGR-CNLR 110
L L AGN CLI QL H IP+SL FL+D T F G+ + G V L L
Sbjct: 78 NPVATLQLSAGNDCLIFQLLHCPTGIPQSLHDFLSDMTYTFVGVGIEGDVKKLTEDYELS 137
Query: 111 CKTAVELGHLAA 122
AV+L LAA
Sbjct: 138 VGNAVDLRGLAA 149
>gi|15795162|dbj|BAB03150.1| unnamed protein product [Arabidopsis thaliana]
Length = 265
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLG 105
+ R A+ L LC GNRC+IIQL H ++P+ L+ FLAD F G+ + L
Sbjct: 119 RVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVGIWNSQDAGKLK 178
Query: 106 RCNLRCKTAVEL 117
R + AV L
Sbjct: 179 RSKHELEIAVLL 190
>gi|15230481|ref|NP_187849.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321957|gb|AAG51014.1|AC069474_13 hypothetical protein; 77417-78214 [Arabidopsis thaliana]
gi|332641675|gb|AEE75196.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLG 105
+ R A+ L LC GNRC+IIQL H ++P+ L+ FLAD F G+ + L
Sbjct: 92 RVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVGIWNSQDAGKLK 151
Query: 106 RCNLRCKTAVEL 117
R + AV L
Sbjct: 152 RSKHELEIAVLL 163
>gi|255573515|ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 211
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 40 LVGIDVKFNHRCTKKAE----MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+VG+DV++ ++ E L LC G+RCLI QL H +IP+SL FL + + FAG+
Sbjct: 56 IVGLDVEWRPNFSRHIENPVATLQLCIGSRCLIYQLIHSPRIPQSLFDFLKNSSYVFAGV 115
Query: 96 EMNGKVDGLGR-CNLRCKTAVELGHLAAR 123
+ V+ L L +EL +AA
Sbjct: 116 GIESDVEKLVEDYGLSVGNVMELRRVAAE 144
>gi|242053889|ref|XP_002456090.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
gi|241928065|gb|EES01210.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
Length = 239
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 40 LVGIDVKFN--------HRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETIC 91
+VG+D ++ +R + A +L LC G+RCL+ Q H +P +L+ FLA+
Sbjct: 58 IVGLDTEWRVVVSHDDGYRDNRMA-VLQLCVGHRCLVFQTVHADYVPAALRAFLANPDHR 116
Query: 92 FAGMEMNGKVDGLG-RCNLRCKTAVELGHLAA 122
F G+ ++G V+ L C + T V+L H+AA
Sbjct: 117 FVGVSVDGDVERLYCDCKILVATPVDLRHVAA 148
>gi|18399624|ref|NP_566424.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321979|gb|AAG51036.1|AC069474_35 hypothetical protein; 71009-71671 [Arabidopsis thaliana]
gi|15795166|dbj|BAB03154.1| unnamed protein product [Arabidopsis thaliana]
gi|105829960|gb|ABF74709.1| At3g12470 [Arabidopsis thaliana]
gi|332641678|gb|AEE75199.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 220
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL----VGIDVKFNHRCTKKA--- 55
K+ +D G+++ VTV A++I I ++++ + + VGI V++ +
Sbjct: 16 KHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSDPDPPP 75
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAV 115
+ L LC G+RCLIIQL + +P+ L+ FLAD F G+ L +C R V
Sbjct: 76 KTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHR----V 131
Query: 116 ELGHL 120
E+G L
Sbjct: 132 EIGKL 136
>gi|242058239|ref|XP_002458265.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
gi|241930240|gb|EES03385.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL----VGIDVKFN---HRCTKKA 55
++E D+ V + D + +D+ +A + R+RL VG+DV++ R K
Sbjct: 10 RFEEDLITTTVTASGADVESWLDEVLA-----VHRRRLHKLVVGLDVEWRPSFSRAYSKT 64
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADET-ICFAGMEMNGKVDGL-GRCNLRCKT 113
+L LC G RCL+ Q+ G +P +L +FL D++ F G+ + L L
Sbjct: 65 AILQLCVGRRCLVFQILRAGYVPIALAEFLGDDSGYTFVGVGVEADAQRLCDDYGLEVGH 124
Query: 114 AVELGHLAA 122
V+L +LAA
Sbjct: 125 TVDLAYLAA 133
>gi|21595009|gb|AAM66064.1| unknown [Arabidopsis thaliana]
Length = 220
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL----VGIDVKFNHRCTKKA--- 55
K+ +D G+++ VTV A++I I ++++ + + VGI V++ +
Sbjct: 16 KHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSDPDPPP 75
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAV 115
+ L LC G+RCLIIQL + +P+ L+ FLAD F G+ L +C R V
Sbjct: 76 KTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHR----V 131
Query: 116 ELGHL 120
E+G L
Sbjct: 132 EIGKL 136
>gi|226502476|ref|NP_001149685.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|195629436|gb|ACG36359.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|414880611|tpg|DAA57742.1| TPA: werner syndrome ATP-dependent helicase [Zea mays]
Length = 204
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 11 NNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNH-RCTKKAEMLIL--CAGNRCL 67
+N+ T+ + ++++ + L R + G+DV++ R + +L C +RCL
Sbjct: 21 HNIDTTLTNLGSVVEWWLGETYRLHHRGHIAGLDVEWRPARVPGPVPVAVLQICVDHRCL 80
Query: 68 IIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLR--CKTAVELGHLAA 122
+ Q+ IP++L +FLAD F G+ ++G V L R R +AV+L LAA
Sbjct: 81 VFQILQADYIPDALSRFLADRRFTFVGVGISGDVAKL-RAGYRLGVASAVDLRVLAA 136
>gi|388513329|gb|AFK44726.1| unknown [Lotus japonicus]
Length = 206
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 40 LVGIDVKF--NHRCTK--KAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+VG+D+++ N + K +L LC +RCL+ Q+ H IP+SL FL++ F G+
Sbjct: 51 IVGLDIEWRPNTQAFKNNPVALLQLCVDHRCLVFQIIHAPSIPDSLSSFLSNPQHTFVGV 110
Query: 96 EMNGKVDGLGRC-NLRCKTAVELGHLAA 122
+ G VD L + + AV+L LAA
Sbjct: 111 GIQGDVDKLLKDRSFTVANAVDLRTLAA 138
>gi|15795164|dbj|BAB03152.1| unnamed protein product [Arabidopsis thaliana]
Length = 210
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKA---LLKRQRLVGIDVKFNHR-CTKKAEML 58
KY ++ G + VTV ++I I + + +VG+ V++ A+ L
Sbjct: 16 KYSVNFFGEELTVTVTPDPSVIGQWIHDVLSNNRFSSHPLVVGVGVQWTPPGYDPPADTL 75
Query: 59 ILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
LC GNRC+IIQL H ++P L FLA F G+
Sbjct: 76 QLCVGNRCIIIQLSHCDRVPRVLHNFLAYPDYTFVGV 112
>gi|242044098|ref|XP_002459920.1| hypothetical protein SORBIDRAFT_02g015821 [Sorghum bicolor]
gi|241923297|gb|EER96441.1| hypothetical protein SORBIDRAFT_02g015821 [Sorghum bicolor]
Length = 455
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 40 LVGIDVKFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNG 99
+VG+D ++ KK ++ +C G +CL+ ++ G IP+ LK FLADE F G+ +
Sbjct: 276 IVGLDTEWFESDRKKIALIQICVGKKCLLFKVGRAGTIPDDLKSFLADENHVFVGVAIAN 335
Query: 100 KVDGL 104
+D L
Sbjct: 336 DLDRL 340
>gi|225437612|ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 196
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKR-QRLVGIDVKFNHR----CTKKAEMLILCAGNRCL 67
++ TV D + +D + + A+ + +VG+D +++ + + L LC +CL
Sbjct: 14 IETTVTDRGSEVDSWVNTILAVYRGGDMIVGLDCEWSPTFLSGTSNRIATLQLCVDTKCL 73
Query: 68 IIQLCHLGQIPESLKKFLADETICFAGMEMNG 99
I+QL + IP+S K FL++ + F G+E+
Sbjct: 74 ILQLFYTDYIPQSFKNFLSNPAVTFVGVEVES 105
>gi|242058231|ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor]
gi|241930236|gb|EES03381.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor]
Length = 226
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 40 LVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFA 93
+VG+D ++ + R + +L LC G+RCL+ Q+ H +P++L+ FLA F
Sbjct: 48 IVGLDTEWRIVHDEDGRRKNRMAVLQLCVGHRCLVYQIFHADYVPDALRDFLACPDHRFL 107
Query: 94 GMEMNGKVDGLGR-CNLRCKTAVELGHLAA 122
G+ ++G V L C L A +L H+AA
Sbjct: 108 GVAVDGDVKRLSEDCGLVVADAADLRHVAA 137
>gi|356566628|ref|XP_003551532.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 211
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 58 LILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVE 116
L LC +RCLI Q+ H +P +L FLA + F G+ ++G VD L + NLR +
Sbjct: 79 LHLCVDHRCLIFQILHAPSVPRALISFLASPNVTFVGVGIHGHVDKLFQDYNLRVANVRD 138
Query: 117 LGHLAAR 123
L LAA
Sbjct: 139 LRSLAAE 145
>gi|356523237|ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
max]
Length = 212
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 40 LVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFA 93
+VG+DV++ N + L LC G+ CLI Q+ + IP +L FL + + F
Sbjct: 58 IVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQILYAPLIPRALSSFLNNPDVIFV 117
Query: 94 GMEMNGKVDGLGR-CNLRCKTAVELGHLAAR 123
G+ + D L R NLR EL LAA
Sbjct: 118 GVGIQEDADKLLRDYNLRVTNVGELRSLAAE 148
>gi|302802887|ref|XP_002983197.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
gi|300148882|gb|EFJ15539.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
Length = 184
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 10 GNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCT----KKAEMLILCAGNR 65
G + V V AA I+ + L + + G+D+++ K ++ +C
Sbjct: 4 GRKIDVVVTSDAAEIESWV-----LRQEGSVFGVDLEWKPNRVMGEENKVALIQICGETE 58
Query: 66 CLIIQLCHLGQIPESLKKFLADET--ICFAGMEMNGKVDGLGRCN-LRCKTAVELGHLAA 122
CLI+Q+C++ QIP++L +FL + + F G+ + + L R + L CK VELG LA
Sbjct: 59 CLIVQMCYIDQIPDALVEFLKNSSSKAMFGGVGVKNDAEKLERDHGLVCKGTVELGVLAT 118
Query: 123 R 123
Sbjct: 119 E 119
>gi|15230494|ref|NP_187850.1| extensin family protein [Arabidopsis thaliana]
gi|12321953|gb|AAG51010.1|AC069474_9 hypothetical protein; 75534-76595 [Arabidopsis thaliana]
gi|15795163|dbj|BAB03151.1| unnamed protein product [Arabidopsis thaliana]
gi|332641676|gb|AEE75197.1| extensin family protein [Arabidopsis thaliana]
Length = 353
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCT-------KKA 55
+Y D + L D + +++ R + + +R A
Sbjct: 157 RYRSDSPPAQFRSVSPPARYLSDSPLVRYRSVSPPARYLSVSPPARYRSVSPPARSDPPA 216
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTA 114
L LC GNRC+IIQL + ++P L++FL D F G + L R R + A
Sbjct: 217 NTLQLCVGNRCIIIQLFYCNRVPHVLRRFLGDRNHTFVGFWNSQDAGKLKRSRHRLEIA 275
>gi|116793719|gb|ABK26855.1| unknown [Picea sitchensis]
Length = 204
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 5 ELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAE----MLIL 60
E+ +++ TV D ++++ + Q +VG D+++ + E +L L
Sbjct: 18 EVHFAEKSIQTTVTDDGHVVENWVNQQTG----QEIVGFDMEWRPSFQRGWENDTALLQL 73
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGH 119
C N CLIIQ+ L IPE+L FL D + G+ + L L C VELG
Sbjct: 74 CTDNGCLIIQMLFLDFIPEALVSFLKDPGVKLVGVGIERDAAKLMNDHGLECGGQVELGA 133
Query: 120 LAAR 123
LAA
Sbjct: 134 LAAE 137
>gi|115438991|ref|NP_001043775.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|55773822|dbj|BAD72360.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773961|dbj|BAD72488.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113533306|dbj|BAF05689.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|125527143|gb|EAY75257.1| hypothetical protein OsI_03144 [Oryza sativa Indica Group]
Length = 199
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHR---CTKKAEMLILCAGNRCLII 69
+ TV A ++ + ++A +VG+DV++ +L LC RCLI
Sbjct: 20 ITTTVTSSGAAVEGWLREVRAAYGPGLIVGLDVEWRPSYGPAQNPVALLQLCVDRRCLIF 79
Query: 70 QLCHLGQIPESLKKFLADETICFAGMEMN 98
QL + +P SL++FLA CF G+ ++
Sbjct: 80 QLLYADYVPGSLRRFLAGAADCFVGVGVD 108
>gi|356523231|ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 238
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 7 DIQGNN---VKVTVVDHAALIDDNIAAL---KALLKRQRL--VGIDVKFNHRCTKKAE-- 56
D+ NN + + +L+D I+ + +QR+ VG+D+++ + +
Sbjct: 43 DVSFNNTHTIYTLLTSDPSLVDSWISTVLRDHQHQHQQRVLTVGLDIEWRPNTQRNMQNP 102
Query: 57 --MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDG-LGRCNLRCKT 113
L LC RCL+ Q+ H IP SL FLAD I F G+ + ++ L NL
Sbjct: 103 VATLQLCVAERCLVFQILHSPSIPPSLVSFLADPNITFVGVGIQEDMEKLLEDYNLNVAN 162
Query: 114 AVELGHLAA 122
+L AA
Sbjct: 163 VRDLRSFAA 171
>gi|302812014|ref|XP_002987695.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
gi|300144587|gb|EFJ11270.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
Length = 184
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 10 GNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCT----KKAEMLILCAGNR 65
G + V V AA I+ + L + + G+D+++ K ++ +C
Sbjct: 4 GRKIDVVVTSDAAEIESWV-----LRQDGSVFGVDLEWKPNRVMGEENKVALIQICGETE 58
Query: 66 CLIIQLCHLGQIPESLKKFLADET--ICFAGMEMNGKVDGLGRCN-LRCKTAVELGHLAA 122
CLI+Q+C++ QIP++L +FL + + F G+ + + L R + L CK VELG LA
Sbjct: 59 CLIVQMCYIDQIPDALVEFLKNSSSKAMFGGVGVKNDAEKLERDHGLVCKGTVELGVLAT 118
Query: 123 R 123
Sbjct: 119 E 119
>gi|357451275|ref|XP_003595914.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355484962|gb|AES66165.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 268
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR-LVGIDVKFNHRCTKKAE----ML 58
Y + + V +++D ++ L + +R LVG+DV++ + E +L
Sbjct: 7 YNVVFHSETIHTMVTHDPSMVDCWLSTLSQTSRSRRFLVGLDVEWLPNRQRNVENPVAVL 66
Query: 59 ILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVEL 117
LC +CL+ Q+ H +P+SL FL +E F G+ + V L R +L VEL
Sbjct: 67 QLCIKKKCLVFQILHASFVPQSLVAFLENEDNTFVGVGVEEDVGKLLRDYSLVVANFVEL 126
Query: 118 GHLAA 122
+LAA
Sbjct: 127 RNLAA 131
>gi|356566624|ref|XP_003551530.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 220
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 40 LVGIDVKF--NHRCTKKAE---MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAG 94
+VG+DV++ N++ + L LC G+RCLI Q+ H IP +L FLA+ I F G
Sbjct: 59 MVGLDVEWRPNYQPNTQPNPVATLQLCTGHRCLIFQIIHAPSIPAALISFLANPNITFFG 118
Query: 95 MEMNGKVDGL 104
+ + + L
Sbjct: 119 VGIRADAEKL 128
>gi|242058237|ref|XP_002458264.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
gi|241930239|gb|EES03384.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 10 GNNV-KVTVVDHAALIDDNIAALKALLKRQRL-----VGIDVKF--NHRCTKKA-EMLIL 60
GN+V TV +D IA + ++ + + VG+DV++ ++R + L L
Sbjct: 12 GNDVITTTVTSSGQAVDRWIAEILSVHRPGGVGYNITVGLDVEWRPSYRSYQNPVATLQL 71
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
C G CLI QL H +P +L +FL D ICF G+
Sbjct: 72 CVGRSCLIFQLLHADYVPGALAEFLGDRGICFFGV 106
>gi|357130641|ref|XP_003566956.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 40 LVGIDVKFNH---RCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGME 96
G+DV++ R A +L LC NRCL+ QL H IP++L L D F G+
Sbjct: 49 FAGLDVEWRPSYGRARNPAALLQLCVQNRCLVFQLLHADYIPQALADSLVDPRWSFVGVG 108
Query: 97 MNGKVDGLGR-CNLRCKTAVELGHLAA 122
++ LG L+ V+L LAA
Sbjct: 109 VDADAVRLGNDYGLQVANTVDLRGLAA 135
>gi|297834046|ref|XP_002884905.1| hypothetical protein ARALYDRAFT_478602 [Arabidopsis lyrata subsp.
lyrata]
gi|297330745|gb|EFH61164.1| hypothetical protein ARALYDRAFT_478602 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRL----VGIDVKFNHRCTKKAEML 58
K+ ++ G+++ VTV A +I I ++++ + + VGI V+ + + K L
Sbjct: 16 KHLINFFGDDLIVTVTPTATVIRRWIRSVRSYNRNHSVHPLVVGIGVRSDPDPSPKT--L 73
Query: 59 ILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAVELG 118
LC G+RCLIIQL +P L+ FL+D F G+ NG+ R C+ +E+G
Sbjct: 74 QLCVGSRCLIIQLGDCYCLPNVLRTFLSDPNTTFVGV-WNGQDQ---RKLATCRHQLEIG 129
Query: 119 HL 120
L
Sbjct: 130 KL 131
>gi|218185470|gb|EEC67897.1| hypothetical protein OsI_35576 [Oryza sativa Indica Group]
Length = 186
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 54 KAEMLILCAGNRCLIIQLCHLG-QIPESLKKFLADETICFAGMEMNGKVDGLG-RCNLRC 111
K +L LC RCL+ QL ++P L +FLAD + F G+ ++G V L CNLR
Sbjct: 42 KVVVLQLCVNRRCLVFQLYQASNEVPRELAEFLADAGVRFVGIGVDGGVRRLANECNLRV 101
Query: 112 KTAVELGHLAA 122
V+L +AA
Sbjct: 102 ACTVDLSDVAA 112
>gi|414887524|tpg|DAA63538.1| TPA: hypothetical protein ZEAMMB73_007452 [Zea mays]
Length = 331
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 40 LVGIDVKFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNG 99
+VG+D ++ KK ++ +C +CL+ ++ G IP++LK FLADE F G+ +
Sbjct: 19 IVGLDTEWFENDRKKIALIQICVDKKCLLFKVNIAGDIPDNLKSFLADEDHVFVGVAIAN 78
Query: 100 KVDGLGRCN-LRCKTAVELGHLAA 122
+D L + + VEL +A
Sbjct: 79 DLDRLRESHQIELSNKVELQAMAP 102
>gi|224089887|ref|XP_002308852.1| predicted protein [Populus trichocarpa]
gi|222854828|gb|EEE92375.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR-------LVGIDVKFNHRCTKKAE 56
Y+++ + + V + ++ IA + L + LVG+D+++ T++ E
Sbjct: 18 YDVNFFDDKIHTLVTHTPSFVNTWIAETQQKLHQNNNPADHPLLVGLDIEWRPNRTRQIE 77
Query: 57 ----MLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICFAGMEMNGKVDGLGR-CNLR 110
L L G CLI QL H IP+SL FL+++ F G+ + G V+ L ++
Sbjct: 78 NPVATLQLSTGKDCLIFQLLHCPTGIPQSLYDFLSNKNYTFVGVGIEGDVEKLVEGYDVS 137
Query: 111 CKTAVELGHLAAR 123
AV+L LAA
Sbjct: 138 MGNAVDLRVLAAE 150
>gi|297834042|ref|XP_002884903.1| hypothetical protein ARALYDRAFT_478601 [Arabidopsis lyrata subsp.
lyrata]
gi|297330743|gb|EFH61162.1| hypothetical protein ARALYDRAFT_478601 [Arabidopsis lyrata subsp.
lyrata]
Length = 255
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A+ L LC GN+C+IIQL H Q+P SL+ FL D
Sbjct: 192 PPADTLQLCVGNKCIIIQLGHCDQVPNSLRTFLTDP 227
>gi|413949087|gb|AFW81736.1| hypothetical protein ZEAMMB73_851303 [Zea mays]
Length = 1027
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 11 NNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAEMLILCAGNRCLIIQ 70
+ V+V V ++ + ++ + +VG+D ++ K+ ++ +C +CL+ +
Sbjct: 267 SEVQVAVTSATMTVERFLRDVRGEEPKPLIVGLDTEWFENDRKRIALIQICVDKKCLLFK 326
Query: 71 LCHLGQIPESLKKFLADETICFAGMEMNGKVDGL 104
+ G IP++LK FLADE F G+ + +D L
Sbjct: 327 VGIAGDIPDNLKSFLADEDHVFVGVAIANDLDRL 360
>gi|125546566|gb|EAY92705.1| hypothetical protein OsI_14456 [Oryza sativa Indica Group]
Length = 231
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 40 LVGIDVKFNHRCTKKAEMLIL--CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
+VG+DV++ + +L C RCL+ Q+ H +P++L +FLAD F G+
Sbjct: 55 VVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYVPDALSRFLADPRFTFVGV-- 112
Query: 98 NGKVDGLGR----CNLRCKTAVELGHLAA 122
G D R L AV+L LAA
Sbjct: 113 -GVRDDAARLRVGYGLEVPRAVDLRALAA 140
>gi|15230500|ref|NP_187852.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321946|gb|AAG51003.1|AC069474_2 hypothetical protein; 72371-73099 [Arabidopsis thaliana]
gi|15795165|dbj|BAB03153.1| unnamed protein product [Arabidopsis thaliana]
gi|332641677|gb|AEE75198.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 242
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 49 HRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+ A+ L LC GNRC+IIQL + ++P+ L+ FLAD F G+
Sbjct: 95 YSSDPPADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFVGI 141
>gi|115457358|ref|NP_001052279.1| Os04g0225100 [Oryza sativa Japonica Group]
gi|38344132|emb|CAD39842.2| OSJNBb0072N21.11 [Oryza sativa Japonica Group]
gi|113563850|dbj|BAF14193.1| Os04g0225100 [Oryza sativa Japonica Group]
Length = 211
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 40 LVGIDVKFNHRCTKKAEMLIL--CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
+VG+DV++ + +L C RCL+ Q+ H +P++L +FLAD F G+
Sbjct: 55 VVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYVPDALSRFLADPRFTFVGV-- 112
Query: 98 NGKVDGLGR----CNLRCKTAVELGHLAA 122
G D R L AV+L LAA
Sbjct: 113 -GVRDDAARLRVGYGLEVPRAVDLRALAA 140
>gi|242054355|ref|XP_002456323.1| hypothetical protein SORBIDRAFT_03g033980 [Sorghum bicolor]
gi|241928298|gb|EES01443.1| hypothetical protein SORBIDRAFT_03g033980 [Sorghum bicolor]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQ-RLVGIDVKFNHRCTKKAEM--- 57
G + +++ TV + ++++ + L R + G+DV++ +
Sbjct: 12 GTVVVSFDADHIDTTVTNFGSVVEWWLGETYRLHGRGGHIAGLDVEWRPARVPGPVVPPV 71
Query: 58 --LILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTA 114
L +C +RCL+ Q+ +P++L +FLAD F G+ + V LG L +A
Sbjct: 72 AVLQICVDHRCLVFQILRADYVPDALSRFLADHRFTFVGVGIGDDVAKLGAGYGLWVASA 131
Query: 115 VELGHLAA 122
V+L LAA
Sbjct: 132 VDLRELAA 139
>gi|413955469|gb|AFW88118.1| hypothetical protein ZEAMMB73_559121 [Zea mays]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 37 RQRLVGIDVKFNHRCT---KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFA 93
R+R VG+DV++ + K + LC G RCLI QL H +P +L +FL+D F
Sbjct: 51 RER-VGLDVEWRPSFSGAYSKTAIHQLCVGRRCLIFQLLHADYVPNTLDEFLSDPDYTFV 109
Query: 94 GM 95
G+
Sbjct: 110 GV 111
>gi|22831296|dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Group]
gi|24414042|dbj|BAC22291.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 752
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 34 LLKRQRL-VGIDVKFN------HRCTKKA--EMLILCAGNRCLIIQLCHLGQIPESLKKF 84
LL+ RL VG+ V++ HR + L LC G+RCL+ L H IP +L++F
Sbjct: 56 LLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRF 115
Query: 85 LADETICFAG 94
LAD I F G
Sbjct: 116 LADPRITFVG 125
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 58 LILCAGNRCLIIQLCHLGQIPESLKKFLAD 87
L LC G+RCL+ Q+ P +L++FLAD
Sbjct: 616 LQLCVGSRCLVFQVAQGNAFPAALRRFLAD 645
>gi|297606613|ref|NP_001058743.2| Os07g0112400 [Oryza sativa Japonica Group]
gi|255677453|dbj|BAF20657.2| Os07g0112400 [Oryza sativa Japonica Group]
Length = 768
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 34 LLKRQRL-VGIDVKFN------HRCTKKA--EMLILCAGNRCLIIQLCHLGQIPESLKKF 84
LL+ RL VG+ V++ HR + L LC G+RCL+ L H IP +L++F
Sbjct: 56 LLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRF 115
Query: 85 LADETICFAG 94
LAD I F G
Sbjct: 116 LADPRITFVG 125
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 58 LILCAGNRCLIIQLCHLGQIPESLKKFLAD 87
L LC G+RCL+ Q+ P +L++FLAD
Sbjct: 632 LQLCVGSRCLVFQVAQGNAFPAALRRFLAD 661
>gi|222636324|gb|EEE66456.1| hypothetical protein OsJ_22851 [Oryza sativa Japonica Group]
Length = 449
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 34 LLKRQRL-VGIDVKFN------HRCTKKA--EMLILCAGNRCLIIQLCHLGQIPESLKKF 84
LL+ RL VG+ V++ HR + L LC G+RCL+ L H IP +L++F
Sbjct: 56 LLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRF 115
Query: 85 LADETICFAG 94
LAD I F G
Sbjct: 116 LADPRITFVG 125
>gi|125557004|gb|EAZ02540.1| hypothetical protein OsI_24650 [Oryza sativa Indica Group]
Length = 496
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 34 LLKRQRL-VGIDVKFN------HRCTKKA--EMLILCAGNRCLIIQLCHLGQIPESLKKF 84
LL+ RL VG+ V++ HR + L LC G+RCL+ L H IP +L++F
Sbjct: 56 LLRSGRLLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRF 115
Query: 85 LADETICFAG 94
LAD I F G
Sbjct: 116 LADPRITFVG 125
>gi|222628416|gb|EEE60548.1| hypothetical protein OsJ_13896 [Oryza sativa Japonica Group]
Length = 166
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 40 LVGIDVKFNHRCTKKAEMLIL--CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
+VG+DV++ + +L C RCL+ Q+ H +P++L +FLAD F G+
Sbjct: 10 VVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYVPDALSRFLADPRFTFVGV-- 67
Query: 98 NGKVDGLGR----CNLRCKTAVELGHLAA 122
G D R L AV+L LAA
Sbjct: 68 -GVRDDAARLRVGYGLEVPRAVDLRALAA 95
>gi|388515667|gb|AFK45895.1| unknown [Medicago truncatula]
Length = 236
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 34 LLKRQRL----VGIDVKFNHRC----TKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFL 85
LL+ Q L +G+D+++ + A L L NRCLI QL H IP L FL
Sbjct: 69 LLETQSLSPAIIGLDIEWRPNSQRGQSNPAATLQLYTNNRCLIFQLIHSPSIPTFLFTFL 128
Query: 86 ADETICFAGMEMNGKVDG-LGRCNLRCKTAVELGHLAA 122
++ F G+ + ++ + NL V+L +LAA
Sbjct: 129 SNPNNRFVGVGIESDIEKIIEDYNLTVANYVDLRNLAA 166
>gi|242056095|ref|XP_002457193.1| hypothetical protein SORBIDRAFT_03g003040 [Sorghum bicolor]
gi|241929168|gb|EES02313.1| hypothetical protein SORBIDRAFT_03g003040 [Sorghum bicolor]
Length = 242
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Query: 6 LDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR---------LVGIDVKFNHRCTK--- 53
L + G +V TV ++ L L RQR VG+ V++ K
Sbjct: 15 LHVGGYHVVTTVTARPGVVRR---WLYTTLWRQRQNLHSAAGLTVGLGVQWTPPFRKLPG 71
Query: 54 ----KAEMLILCAGNRCLIIQLCHLGQ-IPESLKKFLADETICFA 93
+ L LC+GNRCLI Q+ G +P+ L++FLAD I FA
Sbjct: 72 GAEPRPGTLQLCSGNRCLIYQIARAGGVVPKILRRFLADARITFA 116
>gi|388508258|gb|AFK42195.1| unknown [Medicago truncatula]
Length = 199
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 2 GKYELDIQGNNVKVTVVDHAALIDDNIAALKA----LLKRQRL-VGIDVKFNHRCTKKAE 56
+ ++I G N+ VTV A+++ + I + LL+R RL V + + A
Sbjct: 14 SNFTVNINGTNITVTVTASASVVQEWINTTVSIGADLLRRYRLEVALSMD------PAAN 67
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNG 99
L LC G RCLI QL IP +L+ F+ F G G
Sbjct: 68 TLHLCVGVRCLIFQLSRADCIPPNLRSFVYSSHCRFGGFWNRG 110
>gi|297832686|ref|XP_002884225.1| hypothetical protein ARALYDRAFT_900453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330065|gb|EFH60484.1| hypothetical protein ARALYDRAFT_900453 [Arabidopsis lyrata subsp.
lyrata]
Length = 215
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
Query: 3 KYELDIQGNNVKVTVVDHAALID---DNIAALKALLKRQRLVGIDVKFN----------H 49
+Y +D G + V V ++I +N+ +VG+ V +
Sbjct: 16 EYSVDFFGEELIVNVTRTPSVIRKWINNVHFFNRFTSHPLVVGLGVYWTLPGHYADPPPE 75
Query: 50 RCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADET 89
+ A+ L LC G RC+IIQL H +P +L FLA T
Sbjct: 76 SYNRPADTLQLCVGTRCIIIQLSHCDHVPYALHNFLASYT 115
>gi|116309147|emb|CAH66248.1| OSIGBa0101A01.4 [Oryza sativa Indica Group]
Length = 211
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 40 LVGIDVKFNHRCTKKAEMLIL--CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
+VG+DV++ + +L C RCL+ Q+ H +P++L +FLAD F G+
Sbjct: 55 VVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYLPDALSRFLADPRYTFVGV-- 112
Query: 98 NGKVDGLGR----CNLRCKTAVELGHLAA 122
G D R L AV+L LAA
Sbjct: 113 -GVRDDAARLRVGYGLEVPRAVDLRALAA 140
>gi|356566626|ref|XP_003551531.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 213
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 39 RLVGIDVKF------NHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICF 92
++VG+DV++ N + L LC + CLI Q+ H +P +L FLA+ + F
Sbjct: 57 KIVGLDVEWRPNTQSNSQQPNPVATLQLCIDHNCLIFQILHATLVPRALTSFLANRHVKF 116
Query: 93 AGMEMNGKVDGLGR-CNLRCKTAVELGHLAAR 123
G+ + L R NL AV+L LA +
Sbjct: 117 VGVGVRDDAQKLLRDYNLHVANAVDLRSLAEQ 148
>gi|242054351|ref|XP_002456321.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
gi|241928296|gb|EES01441.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 40 LVGIDVKFNHRCTKKAEMLIL--CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
+VG+DV++ + +L C RCL+ Q+ +P++L FLAD F G+ +
Sbjct: 54 IVGLDVEWRPAAPVPGPVAVLQICVDRRCLVFQILRADYVPDALSDFLADRRFTFVGVGI 113
Query: 98 NGKV----DGLGRCNLRCKTAVELGHLAAR 123
DG G L V+L LAAR
Sbjct: 114 RDDAAKLRDGYG---LEVPRTVDLRRLAAR 140
>gi|357120544|ref|XP_003561987.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 199
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 3 KYELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQR--LVGIDVKFNH----RCTKKAE 56
+Y + + TV AA D+ +++A LVG+D ++ K
Sbjct: 5 RYTVRFSSALIDTTVTSDAAAADEWARSVRASNPSGSGILVGLDCEWKPCDHLPVPSKVA 64
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETI 90
+L LC G CLI+Q+ ++ ++P ++ FL D T+
Sbjct: 65 ILQLCVGTSCLILQMFYVDRVPAGIRSFLGDPTV 98
>gi|449437988|ref|XP_004136772.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506029|ref|XP_004162632.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 211
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 37 RQRLVGIDVKFNHRCTKKAE---MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFA 93
R +VG+D+++ K L LC G+RCLI QL + P++L FL D + F
Sbjct: 56 RPLIVGLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFV 115
Query: 94 GMEMNGKVDGLG-RCNLRCKTAVELGHLAA 122
G+ ++ V L L V+L LA
Sbjct: 116 GVGIHQDVQKLYHEYGLTVSNVVDLRDLAV 145
>gi|359481572|ref|XP_002278203.2| PREDICTED: SNF1-related protein kinase catalytic subunit alpha
KIN10-like [Vitis vinifera]
Length = 594
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 16 TVVDHAALIDDNIAALKALLKRQRL----VGIDVKF---NHRCTKKAEMLILCAGNRCLI 68
T+V H + D+ + R RL VG+D+++ N R T +L LC G RCLI
Sbjct: 26 TLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWRPNNARYTNPVAILQLCVGRRCLI 85
Query: 69 IQLCHLGQIPESLKKFLA 86
QL + +IP SL FL
Sbjct: 86 FQLLYAPEIPTSLIDFLG 103
>gi|297838223|ref|XP_002886993.1| hypothetical protein ARALYDRAFT_894216 [Arabidopsis lyrata subsp.
lyrata]
gi|297332834|gb|EFH63252.1| hypothetical protein ARALYDRAFT_894216 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRC 111
K +L LC G+ CLI+QL G +P L FL I F G+ +N + L L C
Sbjct: 58 SKTTLLQLCDGDHCLIVQLPVGGNLPSGLLNFLNLPYITFVGIGINKTLMNLESEFGLTC 117
Query: 112 KTAVELG 118
AVE+G
Sbjct: 118 NNAVEIG 124
>gi|242042704|ref|XP_002459223.1| hypothetical protein SORBIDRAFT_02g000870 [Sorghum bicolor]
gi|241922600|gb|EER95744.1| hypothetical protein SORBIDRAFT_02g000870 [Sorghum bicolor]
Length = 455
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 58 LILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAG 94
L LC G+RCL+ L +PE+L++FLAD + F G
Sbjct: 86 LQLCVGHRCLVFHLARADAVPEALRRFLADPRVTFVG 122
>gi|413943531|gb|AFW76180.1| hypothetical protein ZEAMMB73_099984 [Zea mays]
Length = 269
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 37 RQRLVGIDVKFNHRCT---KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFA 93
R+R VG+DV++ + K + LC G R LI QL H +P +L +FL+D F
Sbjct: 123 RER-VGMDVEWRPSFSGAYSKTTIHQLCVGRRYLIFQLLHADYVPNTLDEFLSDPDYTFV 181
Query: 94 GM 95
G+
Sbjct: 182 GV 183
>gi|226533262|ref|NP_001141102.1| uncharacterized protein LOC100273185 [Zea mays]
gi|194702630|gb|ACF85399.1| unknown [Zea mays]
gi|413950814|gb|AFW83463.1| hypothetical protein ZEAMMB73_986096 [Zea mays]
Length = 202
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 10 GNNV-KVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRC---TKKAEMLIL 60
GN+V TV ++ IA + AL + +VG+DV++ L L
Sbjct: 12 GNDVINTTVTSSGQAVERWIAEILALHRPGSNGYSIIVGLDVEWRPSFGPHQNPVATLQL 71
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
C G+ CLI QL + +P +L +FL D I F G+
Sbjct: 72 CVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGV 106
>gi|195625840|gb|ACG34750.1| hypothetical protein [Zea mays]
Length = 202
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 10 GNNV-KVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRC---TKKAEMLIL 60
GN+V TV ++ IA + AL + +VG+DV++ L L
Sbjct: 12 GNDVINTTVTSSGQAVERWIAEILALHRPGSNGYSIIVGLDVEWRPSFGPHXNPVATLQL 71
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
C G+ CLI QL + +P +L +FL D I F G+
Sbjct: 72 CVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGV 106
>gi|357448871|ref|XP_003594711.1| 3-5 exonuclease/ nucleic acid binding protein [Medicago truncatula]
gi|355483759|gb|AES64962.1| 3-5 exonuclease/ nucleic acid binding protein [Medicago truncatula]
Length = 219
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLV---------GIDVKFNHRCTKK 54
Y +++ GN++ VTV A+++ I+ L +R+ + G+ N R
Sbjct: 16 YTVNVHGNDITVTVTAVASVVRKWISTTLFLFRRRTYLQSNHLVAGLGVQWTANGRY-PP 74
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
+ L LC G RCLI QL H IP L++FL + F G
Sbjct: 75 PDTLQLCIGRRCLIYQLTHANYIPRILRRFLENPDHTFVGF 115
>gi|195644322|gb|ACG41629.1| hypothetical protein [Zea mays]
Length = 202
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 10 GNNV-KVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRC---TKKAEMLIL 60
GN+V TV ++ IA + AL + +VG+DV++ L L
Sbjct: 12 GNDVINTTVTSSGQAVERWIAEILALHRPGSNGYSIIVGLDVEWRPSFGPHQNPVATLQL 71
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
C G+ CLI QL + +P +L +FL D I F G+
Sbjct: 72 CVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGV 106
>gi|413950815|gb|AFW83464.1| hypothetical protein ZEAMMB73_986096 [Zea mays]
Length = 164
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 10 GNNV-KVTVVDHAALIDDNIAALKALLKRQR-----LVGIDVKFNHRC---TKKAEMLIL 60
GN+V TV ++ IA + AL + +VG+DV++ L L
Sbjct: 12 GNDVINTTVTSSGQAVERWIAEILALHRPGSNGYSIIVGLDVEWRPSFGPHQNPVATLQL 71
Query: 61 CAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL 104
C G+ CLI QL + +P +L +FL D I F G+ + + L
Sbjct: 72 CVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGVGVEADAERL 115
>gi|115436116|ref|NP_001042816.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|14495214|dbj|BAB60933.1| unknown protein [Oryza sativa Japonica Group]
gi|15623802|dbj|BAB67862.1| unknown protein [Oryza sativa Japonica Group]
gi|113532347|dbj|BAF04730.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|125525536|gb|EAY73650.1| hypothetical protein OsI_01539 [Oryza sativa Indica Group]
gi|125570051|gb|EAZ11566.1| hypothetical protein OsJ_01433 [Oryza sativa Japonica Group]
gi|215686527|dbj|BAG88780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 12 NVKVTVVDHAALIDDNIAALKALLKRQR--LVGIDVKF--NHRC--TKKAEMLILCAGNR 65
+ TV A D+ ++A + R +VG+D ++ NH T K +L LCAG R
Sbjct: 16 TIDTTVTSDVAAADEWARGVRAAARGGRGLIVGLDCEWKPNHVSWKTSKVAVLQLCAGER 75
Query: 66 -CLIIQLCHLGQIPESLKKFLADETICFAGM 95
CL++QL + ++P ++ L D ++ G+
Sbjct: 76 FCLVLQLFYANRVPPAVADLLGDPSVRLVGI 106
>gi|414883361|tpg|DAA59375.1| TPA: hypothetical protein ZEAMMB73_971392 [Zea mays]
Length = 164
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 60 LCAGNRCLIIQL-CHLGQIPESLKKFLADETICFAG 94
+CAGN CL+ Q+ C G +P L++FLAD + FAG
Sbjct: 1 MCAGNSCLVFQIACAGGAVPRILRRFLADARVTFAG 36
>gi|357130639|ref|XP_003566955.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 234
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 40 LVGIDVKFNHRCTK-------KAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICF 92
+VG+D ++ K + +L LC G+RCL+ Q+ + +P L +FLA+ CF
Sbjct: 75 IVGLDTEWRQISHKGRRAKSFQIALLQLCVGDRCLVFQIFNADYVPHQLAEFLANPDHCF 134
Query: 93 AGMEMNGKVDGLGR-CNLRCKTAVELGHLAA 122
+ + G L C + ++L +AA
Sbjct: 135 VAVGVGGDEQRLREDCGIEVAYTMDLPEVAA 165
>gi|292617367|ref|XP_697980.4| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Danio
rerio]
Length = 1361
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 31 LKALLKRQRLVGIDVK----FNHRCTKKAEMLILCAG-NRCLIIQLCHLGQIPESLKKFL 85
L++ L VG D++ F TKK M+ LCA ++C + + + P LK FL
Sbjct: 57 LRSALSSGSAVGFDLEWPPSFTKGKTKKVAMVQLCASEDKCYLFHISSMSGFPPGLKMFL 116
Query: 86 ADETICFAGMEMNG-KVDGLGRCNLRCKTAVELGHLA 121
DE I G+ + G K L +++ K V+L LA
Sbjct: 117 EDENIMKVGVGIEGDKWKLLSDYDIKLKNIVDLSDLA 153
>gi|222618988|gb|EEE55120.1| hypothetical protein OsJ_02898 [Oryza sativa Japonica Group]
Length = 174
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMN 98
+L LC RCLI QL + +P SL++FLA CF G+ ++
Sbjct: 42 LLQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVD 83
>gi|255574359|ref|XP_002528093.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223532482|gb|EEF34272.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 247
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 4 YELDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVG-----IDVKFNHRCTK--KAE 56
Y + G+ + VTV A+++ ++ + R+ VG + V++N + A+
Sbjct: 17 YTVSFFGSPISVTVTSSASVVRKWLST--TIFHRRYYVGRLVVCVGVQWNPFKSDCLSAD 74
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGK 100
L LC G CLI +L ++P L++FL D G+ NG
Sbjct: 75 TLQLCVGGHCLIFKLSLATRVPRLLRRFLLDTRNTLVGL-WNGS 117
>gi|289743943|gb|ADD20719.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 514
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 25 DDNIAALKALLKRQRLVGIDVKFNH--RCTKKAEMLILCAGNR-CLIIQLCHLGQIPESL 81
DD + LK +++G D ++ R + +L L + N C + +LCH+ IPESL
Sbjct: 66 DDMVEKLKRHCWDYKVLGFDCEWITIGRVRRPVALLQLASPNGFCGLFRLCHMDHIPESL 125
Query: 82 KKFLADETICFAGMEMNG 99
K LAD+ I G++ G
Sbjct: 126 KNLLADKDIIKVGVDPAG 143
>gi|297823019|ref|XP_002879392.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325231|gb|EFH55651.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMN 98
+ +RCLIIQL H IP+ L+ FL D TI G+ N
Sbjct: 10 SSSRCLIIQLSHCNYIPDILRSFLEDRTITVVGVWNN 46
>gi|375256792|ref|YP_005015959.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
gi|363407096|gb|AEW20782.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
Length = 198
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 6 LDIQGNNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVK----FNHRCTKKAEMLILC 61
L ++ + VVD + + L A R VG D + F K ++ L
Sbjct: 18 LPVESFPGHIVVVDRPEEVGQAVRILSA----SRCVGFDTETRPSFKKNQHHKVALMQLS 73
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
N C + +L HLG IPE L FL DE I G+ +
Sbjct: 74 TENVCYLFRLNHLGGIPEPLIAFLKDERITKIGLSL 109
>gi|302803390|ref|XP_002983448.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
gi|300148691|gb|EFJ15349.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
Length = 200
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 27 NIAALKALLKRQRLVGIDVKFNHRCTK-----KAEMLILC-AGNRCLIIQLCHLGQIPES 80
+I +LKA R ++G D ++ + + +L LC +RC + + H G IP
Sbjct: 29 SIESLKADGTRDIVLGFDTEWKPSFERGAVPGRTAVLQLCLDSSRCYVFHIFHSG-IPPQ 87
Query: 81 LKKFLADETICFAGMEMNGKVDGL 104
L+K L +ETI AG+ ++G V L
Sbjct: 88 LQKLLEEETIWKAGIGISGDVSKL 111
>gi|345519834|ref|ZP_08799245.1| hypothetical protein BSFG_02749 [Bacteroides sp. 4_3_47FAA]
gi|254836293|gb|EET16602.1| hypothetical protein BSFG_02749 [Bacteroides sp. 4_3_47FAA]
Length = 216
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 97
Query: 89 TICFAGMEMNGKVDGLGR 106
T+ G+ + + L R
Sbjct: 98 TLKI-GLSLKDDFNSLRR 114
>gi|302784546|ref|XP_002974045.1| hypothetical protein SELMODRAFT_100501 [Selaginella moellendorffii]
gi|300158377|gb|EFJ25000.1| hypothetical protein SELMODRAFT_100501 [Selaginella moellendorffii]
Length = 200
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 27 NIAALKALLKRQRLVGIDVKFNHRCTK-----KAEMLILC-AGNRCLIIQLCHLGQIPES 80
+I +LKA R ++G D ++ + + +L LC +RC + + H G IP
Sbjct: 29 SIESLKADGTRDIVLGFDTEWKPSFERGAVPGRTAVLQLCLDSSRCYVFHIFHSG-IPPQ 87
Query: 81 LKKFLADETICFAGMEMNGKVDGL 104
L+K L +ETI AG+ ++G V L
Sbjct: 88 LQKLLEEETISKAGIGISGDVSKL 111
>gi|319641711|ref|ZP_07996394.1| hypothetical protein HMPREF9011_01992 [Bacteroides sp. 3_1_40A]
gi|317386685|gb|EFV67581.1| hypothetical protein HMPREF9011_01992 [Bacteroides sp. 3_1_40A]
Length = 216
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|237708989|ref|ZP_04539470.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457051|gb|EEO62772.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 221
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 44 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 102
Query: 89 TI 90
T+
Sbjct: 103 TL 104
>gi|265755584|ref|ZP_06090205.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345516624|ref|ZP_08796113.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|423232236|ref|ZP_17218637.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|423241855|ref|ZP_17222966.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|423242747|ref|ZP_17223823.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
gi|229436866|gb|EEO46943.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|263234190|gb|EEZ19783.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392624537|gb|EIY18617.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|392640383|gb|EIY34184.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|392647190|gb|EIY40894.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
Length = 216
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|423314256|ref|ZP_17292190.1| hypothetical protein HMPREF1058_02802 [Bacteroides vulgatus
CL09T03C04]
gi|392683026|gb|EIY76364.1| hypothetical protein HMPREF1058_02802 [Bacteroides vulgatus
CL09T03C04]
Length = 216
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|15228731|ref|NP_191791.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|7340703|emb|CAB82946.1| putative protein [Arabidopsis thaliana]
gi|332646817|gb|AEE80338.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 171
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 26 DNIAALKALLKRQRLVGIDVKFNHRCTKKAEMLILCAGNRCLIIQLCHL--GQIPESLKK 83
+N + L + +VG D ++ K +L L G CLII L ++ ++P SL
Sbjct: 37 ENANKIIGLDTERSVVGGDSEYPPE--SKLVILELSDGQNCLIIPLPYVQGNKLPVSLTN 94
Query: 84 FLADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGHLAA 122
FL F G+ +N + L C L CK AV++G +
Sbjct: 95 FLNLPDFTFTGVGINKALKMLKSECGLTCKNAVDIGPSSP 134
>gi|294775292|ref|ZP_06740815.1| 3'-5' exonuclease [Bacteroides vulgatus PC510]
gi|294450869|gb|EFG19346.1| 3'-5' exonuclease [Bacteroides vulgatus PC510]
Length = 216
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSD 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|242044354|ref|XP_002460048.1| hypothetical protein SORBIDRAFT_02g021840 [Sorghum bicolor]
gi|241923425|gb|EER96569.1| hypothetical protein SORBIDRAFT_02g021840 [Sorghum bicolor]
Length = 309
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 11 NNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKF-NHRCTKKAEMLILCAGNRCLII 69
+ V VTV ++ + ++ + +VG+D + + KK ++ +C RCL+
Sbjct: 82 HEVLVTVTSSTKTVEGFLREVRGEEPKPLIVGLDTEHAEYEGKKKIALIQICVNTRCLLF 141
Query: 70 QLCHLGQ-IPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVEL 117
Q+ G IP+ LK F E F G+ + +D L + N+ VEL
Sbjct: 142 QVGITGGCIPDDLKSFFVRENHVFVGVAITNDMDLLRQHHNIELSKKVEL 191
>gi|313205201|ref|YP_004043858.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
gi|312444517|gb|ADQ80873.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
Length = 231
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 14 KVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTK----KAEMLILCAGNRCLII 69
K+T+VD + I IA L+ + ++VGID + T+ K ++ + + C +
Sbjct: 22 KITLVDDLSKIQPAIAELR----KSKVVGIDTETKPSFTRGTYHKVSLVQISTLDHCFLF 77
Query: 70 QLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
+L + P +L +FL+DE I G+ + ++GL +
Sbjct: 78 RLNKID-FPAALAEFLSDENIKKIGLSLRDDLNGLNK 113
>gi|289739467|gb|ADD18481.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 349
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 19 DHAALIDDNIAALKALLKRQRLVGIDVKFNH--RCTKKAEMLILCAGN-RCLIIQLCHLG 75
DH D+ + L+ +++G D ++ R K +L L + N C + +LCH+
Sbjct: 30 DHDKACDNIVNTLRQHCGDYKVLGFDCEWITIGRVRKPVALLQLASPNGFCGLFRLCHMD 89
Query: 76 QIPESLKKFLADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGHLAA 122
IPESLK LAD+ I G+ L G + + ++ +LAA
Sbjct: 90 HIPESLKNLLADKEIIKVGVNPAEDARKLQGDYGIYVASTFDIRYLAA 137
>gi|242042706|ref|XP_002459224.1| hypothetical protein SORBIDRAFT_02g000880 [Sorghum bicolor]
gi|241922601|gb|EER95745.1| hypothetical protein SORBIDRAFT_02g000880 [Sorghum bicolor]
Length = 244
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 41 VGIDVKFNHRCTK-------KAEMLILCAGNRCLIIQLCHL-GQIPESLKKFLADETICF 92
VG+ V++ K + L LCAGN CL+ ++ G +P L++FLAD + F
Sbjct: 20 VGLGVQWTPPFRKLPAGAEPRPGTLQLCAGNSCLVFKIAQAGGAVPRILRRFLADARVTF 79
Query: 93 A 93
A
Sbjct: 80 A 80
>gi|150006113|ref|YP_001300857.1| hypothetical protein BVU_3624 [Bacteroides vulgatus ATCC 8482]
gi|149934537|gb|ABR41235.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 216
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P+SL++FL
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPDSLQEFLMSN 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|212692047|ref|ZP_03300175.1| hypothetical protein BACDOR_01542 [Bacteroides dorei DSM 17855]
gi|212665439|gb|EEB26011.1| 3'-5' exonuclease [Bacteroides dorei DSM 17855]
Length = 216
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 33 ALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADE 88
A LK QR+VG+D + F T K +L + + C + +L +G +P SL++FL +
Sbjct: 39 AYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFRLNRIG-MPNSLQEFLMSD 97
Query: 89 TI 90
T+
Sbjct: 98 TL 99
>gi|297826051|ref|XP_002880908.1| hypothetical protein ARALYDRAFT_901631 [Arabidopsis lyrata subsp.
lyrata]
gi|297326747|gb|EFH57167.1| hypothetical protein ARALYDRAFT_901631 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 13 VKVTVVDHAALIDDNIAALKA-LLKRQRLVGIDVKFNHRCTKK----------AEMLILC 61
+ T+ I++ I AL + RL+G+D+ R + A +L L
Sbjct: 13 IDTTIATTEEEINEGIQALLSNTSNHNRLIGLDM-ITFRVAPEPSSTSGKPSNAAILQLY 71
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVELG 118
+CLII L L +PESL FL FAG + + L + CK +E+G
Sbjct: 72 DSTQCLIIWLHSLHDVPESLYNFLILPAFTFAGFGIKDTIASLKKDYGYVCKNVLEVG 129
>gi|22831293|dbj|BAC16147.1| hypothetical protein [Oryza sativa Japonica Group]
gi|24414039|dbj|BAC22288.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 195
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 50 RCTKKAEMLILCAGNRCLIIQL-CHLGQIPESLKKFLADETICFAG 94
R T + L LCAG+RCL+ QL +P +L++FLADE + F G
Sbjct: 47 RATIRPGTLQLCAGHRCLVFQLAHADAAVPAALRRFLADERVVFVG 92
>gi|397637825|gb|EJK72820.1| hypothetical protein THAOC_05610 [Thalassiosira oceanica]
Length = 1724
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 15 VTVVDHAALIDDNIAALKALL--KRQRLVGIDVK-------FNHRCT---KKAEMLILC- 61
VT+ A ++D A++ ++ + + +G D + R T KK ++ LC
Sbjct: 568 VTIASTVAEMNDAADAVRQIVLNSKSKWIGFDTETEVDTNSMTGRPTGVRKKVGLIQLCY 627
Query: 62 ----AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
R +++++C+ +IP+ ++ L D+ I FAG ++G + GL R
Sbjct: 628 RDDEQKKRVVLLRICNSRKIPDRVQALLGDKNITFAGNNIHGDITGLIR 676
>gi|125557002|gb|EAZ02538.1| hypothetical protein OsI_24647 [Oryza sativa Indica Group]
gi|125598888|gb|EAZ38464.1| hypothetical protein OsJ_22848 [Oryza sativa Japonica Group]
Length = 159
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 50 RCTKKAEMLILCAGNRCLIIQL-CHLGQIPESLKKFLADETICFAG 94
R T + L LCAG+RCL+ QL +P +L++FLADE + F G
Sbjct: 11 RATIRPGTLQLCAGHRCLVFQLAHADAAVPAALRRFLADERVVFVG 56
>gi|47847991|dbj|BAD21778.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47848626|dbj|BAD22475.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 140
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGL 104
+L LC RCLI H +P SL++F+ CF G+ ++ + + L
Sbjct: 74 LLQLCVDRRCLIFPFLHTDYVPGSLRRFITGAADCFVGLGVDKEAERL 121
>gi|255575430|ref|XP_002528617.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223531962|gb|EEF33775.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 225
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 4 YELDIQGNNVKVTVVDHAA----LIDDNIAALKALLKRQRLV-GIDVKFN-------HRC 51
Y + N + VT+ A ++ ++ LL+++ LV GI V++N C
Sbjct: 20 YTVQFFDNIINVTLTSSAVEAIDWLNKTLSLHYNLLEKEELVVGIGVQWNPIKDDNQESC 79
Query: 52 TKKAEMLILCAGNRCLIIQLC-HLGQIPESLKKFLAD-ETICFAG 94
A++L LC G+RCLI QL + P SL+ FL++ + FAG
Sbjct: 80 ---ADILQLCIGDRCLIFQLSVPNAEFPVSLRTFLSNGKKKTFAG 121
>gi|125525535|gb|EAY73649.1| hypothetical protein OsI_01538 [Oryza sativa Indica Group]
Length = 288
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 57 MLILCAGNRCLIIQLCHLG---QIPESLKKFLADETICFAGM---EMNGKV-DGLGRCNL 109
+L LCAG+ CLI+QL H+ ++P + LAD ++ G+ E K+ DG G +
Sbjct: 143 ILQLCAGDSCLILQLLHVAGARRVPPLVGDLLADPSVRLVGIGIGENAAKLADGYG---V 199
Query: 110 RCKTAVEL 117
RC V+L
Sbjct: 200 RCAAPVDL 207
>gi|242057159|ref|XP_002457725.1| hypothetical protein SORBIDRAFT_03g012390 [Sorghum bicolor]
gi|241929700|gb|EES02845.1| hypothetical protein SORBIDRAFT_03g012390 [Sorghum bicolor]
Length = 261
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKR--QRLVGIDVKF--NHRC--TKKAEMLILCAGNRC 66
+ TV AA+ DD + ++A R + +VG+D ++ N+R T K +L LCAG RC
Sbjct: 23 IDTTVNRDAAVADDWVRTVRAANPRGARLVVGLDCEWKPNYRSWTTSKVAILQLCAGTRC 82
Query: 67 LIIQL 71
L++ L
Sbjct: 83 LVLHL 87
>gi|242048942|ref|XP_002462215.1| hypothetical protein SORBIDRAFT_02g021856 [Sorghum bicolor]
gi|241925592|gb|EER98736.1| hypothetical protein SORBIDRAFT_02g021856 [Sorghum bicolor]
Length = 335
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 11 NNVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKF-NHRCTKKAEMLILCAGNRCLII 69
+ V VTV ++ + ++ + +VG+D + + KK ++ +C RCL+
Sbjct: 105 HKVLVTVTSSTKTVEGFLREVRGEEPKPLIVGLDTEHAEYEGKKKIALIQICVNTRCLLF 164
Query: 70 QLCHLGQ-IPESLKKFLADETICFAGMEMNGKVDGLGR-CNLRCKTAVEL 117
Q+ G IP+ +K F E F G+ + +D L + N+ VEL
Sbjct: 165 QVGVAGGCIPDDIKSFFVRENHVFVGVAIANDMDLLRQHHNIELSKKVEL 214
>gi|115436114|ref|NP_001042815.1| Os01g0299700 [Oryza sativa Japonica Group]
gi|113532346|dbj|BAF04729.1| Os01g0299700, partial [Oryza sativa Japonica Group]
Length = 237
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 57 MLILCAGNRCLIIQLCHLG---QIPESLKKFLADETICFAGM---EMNGKV-DGLGRCNL 109
+L LCAG+ CLI+QL H+ ++P + LAD ++ G+ E K+ DG G +
Sbjct: 92 ILQLCAGDSCLILQLLHVAGARRVPPLVGDLLADPSVRLVGIGIGENAAKLADGYG---V 148
Query: 110 RCKTAVEL 117
RC V+L
Sbjct: 149 RCAAPVDL 156
>gi|125598889|gb|EAZ38465.1| hypothetical protein OsJ_22850 [Oryza sativa Japonica Group]
Length = 247
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETIC 91
+ L LC G+RCL+ Q+ P +L++FLAD +
Sbjct: 106 PRPGTLQLCVGSRCLVFQVAQGNAFPAALRRFLADGGVA 144
>gi|357448875|ref|XP_003594713.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355483761|gb|AES64964.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 277
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 12 NVKVTVVDHAALIDDNIAA-----LKALLKRQRLVGIDVKFNHR-CTKKAEMLILCAGNR 65
N +VTV A+++ + + L+ L +VG+ V++ +R A+ L LC G
Sbjct: 29 NFEVTVTATASVVTNWLRTMLDHHLQYLRNCNLVVGLGVQWTNRNLDPPADTLQLCIGGS 88
Query: 66 CLIIQLCHLGQIPESLKKFLADETICFAGM 95
CLI L IP SL FL F G
Sbjct: 89 CLIFHLSRADMIPVSLCNFLRHPKNTFVGF 118
>gi|226509292|ref|NP_001146735.1| uncharacterized protein LOC100280337 [Zea mays]
gi|195625788|gb|ACG34724.1| 3-5 exonuclease family protein [Zea mays]
gi|219888535|gb|ACL54642.1| unknown [Zea mays]
Length = 217
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 57 MLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLG-RCNLRCKTAV 115
+L LC G+RCL+ Q+ +P +LK FLA F G+ ++ V+ L CN+ V
Sbjct: 66 VLQLCVGHRCLVFQIVAADYVPAALKAFLASPQHRFVGVVVDVDVERLRCDCNIVVNNTV 125
Query: 116 ELGHLAA 122
+L + AA
Sbjct: 126 DLRYAAA 132
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 15 VTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAEMLILCAGNR---CLIIQL 71
+ VV +A + L+ + R++G D ++ K+ + +L + C +I+L
Sbjct: 47 IRVVTNAEECQQVVGTLRNHCRDYRILGFDCEWVTEKGKRHPVALLQLASHQGLCALIRL 106
Query: 72 CHLGQIPESLKKFLADETICFAGMEMNGKVDG--LGRC--NLRCKTAVELGHLAAR 123
C + +IP L + L D I G+ G ++ L R NL+ ++A++L HLA R
Sbjct: 107 CQMKRIPPELGELLNDPGILKVGI---GAIEDAQLLRSDYNLKVESALDLRHLAER 159
>gi|332882913|ref|ZP_08450520.1| 3'-5' exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357046813|ref|ZP_09108432.1| 3'-5' exonuclease [Paraprevotella clara YIT 11840]
gi|332679121|gb|EGJ52111.1| 3'-5' exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355530332|gb|EHG99745.1| 3'-5' exonuclease [Paraprevotella clara YIT 11840]
Length = 206
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 40 LVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGM 95
++G+D + F CT K +L + + C + +L H+G + ES+K+ L DE + G+
Sbjct: 46 VLGVDTETRPSFRKGCTNKVALLQVSTDDTCFLFRLNHIG-VTESVKRLLQDENVLKVGL 104
Query: 96 EM 97
+
Sbjct: 105 SL 106
>gi|222622515|gb|EEE56647.1| hypothetical protein OsJ_06057 [Oryza sativa Japonica Group]
Length = 231
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 65 RCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLG 105
RCLI H IP SL++FLA CF G+ ++ + L
Sbjct: 129 RCLIFPFLHADYIPGSLRRFLAGAADCFVGVSVDKDAERLS 169
>gi|307108694|gb|EFN56933.1| hypothetical protein CHLNCDRAFT_143460 [Chlorella variabilis]
Length = 328
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 40 LVGIDVKFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEM 97
DV + ++ L + + C++++ C LG P L FL D +ICF GM
Sbjct: 164 WPSTDVPAYSHSFQGVALVQLASADTCVLVRTCLLG-FPRELSNFLRDPSICFIGMHW 220
>gi|218198982|gb|EEC81409.1| hypothetical protein OsI_24649 [Oryza sativa Indica Group]
Length = 159
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 53 KKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETI 90
+ L LC G+RCL+ Q+ P +L++FLAD +
Sbjct: 18 PRPGTLQLCVGSRCLVFQVAQGNAFPAALRRFLADGGV 55
>gi|91805695|gb|ABE65576.1| hypothetical protein At5g48350 [Arabidopsis thaliana]
Length = 199
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 37 RQRLVGIDVKFNHRCTK--KAEMLILCAGNRCLIIQLC---------HLGQIPESLKKFL 85
R++++G+D + + K K +L LC G+ CLI+QL +P L FL
Sbjct: 38 RKKIIGLDTERVQKGRKLNKTVLLQLCDGDNCLIVQLPDEDEDEGEGEDDNLPLPLFNFL 97
Query: 86 ADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGH 119
F G+ +N + L L CK VE+G
Sbjct: 98 NLPEFTFVGIGINKTMMRLESEFGLTCKNVVEIGP 132
>gi|15238945|ref|NP_199646.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|8978339|dbj|BAA98192.1| unnamed protein product [Arabidopsis thaliana]
gi|52354521|gb|AAU44581.1| hypothetical protein AT5G48350 [Arabidopsis thaliana]
gi|332008274|gb|AED95657.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 199
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 37 RQRLVGIDVKFNHRCTK--KAEMLILCAGNRCLIIQLC---------HLGQIPESLKKFL 85
R++++G+D + + K K +L LC G+ CLI+QL +P L FL
Sbjct: 38 RKKIIGLDTERVQKGRKLNKTVLLQLCDGDNCLIVQLPDEDEDEGEGEDDNLPLPLFNFL 97
Query: 86 ADETICFAGMEMNGKVDGL-GRCNLRCKTAVELGH 119
F G+ +N + L L CK VE+G
Sbjct: 98 NLPEFTFVGIGINKTMMRLESEFGLTCKNVVEIGP 132
>gi|297843066|ref|XP_002889414.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335256|gb|EFH65673.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 217
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 13 VKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTK-----KAEMLILCAGNRCL 67
++ TV A+ + I A++ L Q + + N + K L LC +CL
Sbjct: 15 IETTVTSEVAIAKNWILAVR--LAYQEEPTVIISLNSKTNPQDDDAKTSTLQLCIKTKCL 72
Query: 68 IIQLCHLGQ---IPESLKKFLADETICFAGMEMNGKVDGLG 105
I+QL H+ Q + E L DE F G+ + + LG
Sbjct: 73 ILQLLHMNQNTNLGECLSDLFRDERFVFVGIGIAETIAKLG 113
>gi|297846488|ref|XP_002891125.1| hypothetical protein ARALYDRAFT_336533 [Arabidopsis lyrata subsp.
lyrata]
gi|297336967|gb|EFH67384.1| hypothetical protein ARALYDRAFT_336533 [Arabidopsis lyrata subsp.
lyrata]
Length = 1333
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLG-----QIPESLKKFLAD--ETICFAGMEMN 98
K NH C + + L+ C +RC + CH+G Q+ + F E++ M +
Sbjct: 312 KSNHTCGQSCDKLLYCGRHRCE--RACHVGACDPCQVQVNASCFCKQTVESVICGDMNVK 369
Query: 99 GKV---DGLGRCNLRCKTAVELGHLAAR 123
G+V DG+ C L C+ +E G+ R
Sbjct: 370 GEVKAEDGVFSCKLNCRKQLECGNHYCR 397
>gi|357448623|ref|XP_003594587.1| hypothetical protein MTR_2g031120 [Medicago truncatula]
gi|355483635|gb|AES64838.1| hypothetical protein MTR_2g031120 [Medicago truncatula]
Length = 160
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 12 NVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAEMLILCAGNRCLIIQL 71
+ +T AA +N LL+ N K L C G+ C I QL
Sbjct: 23 DTNITTDTSAASFCENSIETTLLLRSDVYPKSTFFVNFSIDPKVNTLKFCVGDHCNIFQL 82
Query: 72 CHLGQIPESLKKFLADETICFAGME 96
IP +++F+ D I F G++
Sbjct: 83 NRTNTIPTCIREFIKDRLIGFPGLK 107
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 12 NVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKF-NHRCTKKAEMLILCAGNR--CLI 68
N V +V + I L+ + R++G D ++ N + + L+ A +R C +
Sbjct: 43 NQSVRIVTNPEDCQKVIGLLRDHCREFRVLGFDCEWVNEQGKRHPVALLQLATHRGLCAL 102
Query: 69 IQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRC----NLRCKTAVELGHLAAR 123
I+LC + +IP L + L D I G+ G ++ NL+ ++ ++L HLA R
Sbjct: 103 IRLCEMKRIPPELGELLNDPAIVKVGV---GPLEDAKLLRHDYNLKVESTLDLRHLADR 158
>gi|357447357|ref|XP_003593954.1| Werner syndrome ATP-dependent helicase-like protein [Medicago
truncatula]
gi|355483002|gb|AES64205.1| Werner syndrome ATP-dependent helicase-like protein [Medicago
truncatula]
Length = 116
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 51 CTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGR 106
C + + L CL+ Q+ H +P+SL FL +E F G+ + VD L R
Sbjct: 12 CPPQLMSVQLYIAEECLVFQILHASFVPKSLVAFLGNENNKFVGVGIKEDVDKLLR 67
>gi|383812289|ref|ZP_09967727.1| 3'-5' exonuclease [Prevotella sp. oral taxon 306 str. F0472]
gi|383354849|gb|EID32395.1| 3'-5' exonuclease [Prevotella sp. oral taxon 306 str. F0472]
Length = 222
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 30 ALKALLKRQRLVGIDVK----FNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFL 85
A+ LL R ++G+D + F +K +L C + C + +L ++G IP+ +K+FL
Sbjct: 40 AVDYLLSRD-IIGVDTETRPVFKKGHRRKVALLQACDHDVCFLFRLNYIG-IPDCIKRFL 97
Query: 86 ADETICFAGMEMNGKVDGL-GRCNLRCKTAVEL 117
D T+ G+ ++ + L R N + ++L
Sbjct: 98 EDTTVPKVGLSLSDDMLMLHQRANFKPGYFIDL 130
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 41 VGIDVKFNHRCTK----KAEMLILCAGN-RCLIIQLCHLGQIPESLKKFLADETICFAGM 95
VG D+++ TK K ++ LC +C + + + P+ LK+ L DETI G+
Sbjct: 89 VGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVGV 148
Query: 96 EMNGKVDGL-GRCNLRCKTAVELGHLA 121
+ G L G ++ K+ VEL +A
Sbjct: 149 GIEGDHWKLMGDFEVKLKSFVELADVA 175
>gi|290490726|dbj|BAI79323.1| WRN helicase [Gallus gallus]
Length = 1498
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 41 VGIDVKFNHRCTK----KAEMLILCAGN-RCLIIQLCHLGQIPESLKKFLADETICFAGM 95
VG D+++ TK K ++ LC +C + + + P+ LK+ L DETI G+
Sbjct: 89 VGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVGV 148
Query: 96 EMNGKVDGL-GRCNLRCKTAVELGHLA 121
+ G L G ++ K+ VEL +A
Sbjct: 149 GIEGDHWKLMGDFEVKLKSFVELADVA 175
>gi|77549317|gb|ABA92114.1| hypothetical protein LOC_Os11g11510 [Oryza sativa Japonica Group]
Length = 324
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 54 KAEMLILCAGNRCLIIQLCHLG-QIPESLKKFLADETICFAGMEMNGKVDGLG-RCNLRC 111
K +L LC RCL+ QL ++P L +FLAD + F G+ ++G V L CNLR
Sbjct: 217 KVVVLQLCVNRRCLVFQLYQASNEVPRELAEFLADAGVRFVGVGVDGGVRRLANECNLRV 276
Query: 112 KTAVELGHLAA 122
AV+L AA
Sbjct: 277 ACAVDLRDAAA 287
>gi|297826225|ref|XP_002880995.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326834|gb|EFH57254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 175
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 5 ELDIQGN-NVKVTVVDHAALIDDNIAALKALLKRQRLVGIDVKFNHRCTKKAE--MLILC 61
ELD++ N NV V+V + + + I K L + + V R + + L LC
Sbjct: 10 ELDLEENVNVAVSVSNSLSFPREWIRKTK-FLHANHIHDLQVGVAIRTNQAGDDVFLALC 68
Query: 62 AGNRCLIIQLCHLGQIPESLKKFLADETICFAGMEMNGKVDGLGRCNLRCKTAVELG 118
GNRCL+I+L + I L FL +T F G+ ++ KTA +LG
Sbjct: 69 VGNRCLVIRLPDM--IEGCLADFLTADTNRFVGLHQEPPIELANY-----KTAAQLG 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.141 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,742,336,108
Number of Sequences: 23463169
Number of extensions: 60432049
Number of successful extensions: 161690
Number of sequences better than 100.0: 165
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 161549
Number of HSP's gapped (non-prelim): 176
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)