Your job contains 1 sequence.
>037983
MANQPRTRKRVHAIRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVKRFKGVCEK
PKLVKQDSYSDQTRSPFRIFMETFVETCGSRELIDIDQKGFEKWKNMSKEERQPYVIKAE
MLDAAHRRALLEEVTSMPRFMDDEADSAMVWKYDKSYDPIYSTEILKCSNSSRFESLNTY
NREVMDPWTLERSHGRWLPFFEILG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037983
(205 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2153514 - symbol:AT5G05330 species:3702 "Arabi... 346 1.6e-31 1
TAIR|locus:505006631 - symbol:AT5G23405 "AT5G23405" speci... 105 6.1e-05 1
TAIR|locus:2154433 - symbol:HMGB6 "high-mobility group bo... 112 0.00014 1
>TAIR|locus:2153514 [details] [associations]
symbol:AT5G05330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR009071
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AY954865 EMBL:DQ132719 IPI:IPI00542765 RefSeq:NP_196152.2
UniGene:At.54729 ProteinModelPortal:Q58FU4
EnsemblPlants:AT5G05330.1 GeneID:830415 KEGG:ath:AT5G05330
TAIR:At5g05330 HOGENOM:HOG000064710 InParanoid:Q58FU4 OMA:FNARAME
ProtClustDB:CLSN2699112 Genevestigator:Q58FU4 Uniprot:Q58FU4
Length = 220
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 76/167 (45%), Positives = 104/167 (62%)
Query: 1 MANQPRTRKRVHAIRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVKRFKGVCEK 60
MA +PRTRKRV A+RRA DGSAF+KC+ C M+ IAL DMHEC K + +VKRFK +
Sbjct: 33 MAIRPRTRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEK-RREVKRFKYIASG 91
Query: 61 --PKLVKQ-DSYSDQTRSPFRIFMETFVETCGSRELIDIDQKGFEKWKNMSKEERQPYVI 117
+ K S+ D+ RSPF F+E F E +L+D + F WKNMS E+++P+
Sbjct: 92 NIDNISKPIGSFEDEPRSPFVFFLEEFRENYNG-DLVDASRICFNVWKNMSAEDQKPFNA 150
Query: 118 KAEMLDAAHRRALLEEVTSMPRFMDDEADSAMVWKYDKSYDPIYSTE 164
+A +D+AH R L EE ++ + D+EADS V +YDK Y+ E
Sbjct: 151 RAMEVDSAHSRKLNEEAKTIYK-ADEEADSKTVGRYDKFYESYVQIE 196
>TAIR|locus:505006631 [details] [associations]
symbol:AT5G23405 "AT5G23405" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006333 "chromatin assembly or
disassembly" evidence=RCA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AB018110 EMBL:AY052244 EMBL:BT020349 IPI:IPI00546033
IPI:IPI00547115 RefSeq:NP_568430.2 RefSeq:NP_851063.1
UniGene:At.26423 ProteinModelPortal:Q941D1 SMR:Q941D1 IntAct:Q941D1
STRING:Q941D1 EnsemblPlants:AT5G23405.1 GeneID:832406
KEGG:ath:AT5G23405 TAIR:At5g23405 eggNOG:NOG291653
HOGENOM:HOG000242532 InParanoid:Q941D1 OMA:RMHICYA PhylomeDB:Q941D1
ProtClustDB:CLSN2680197 Genevestigator:Q941D1 Uniprot:Q941D1
Length = 149
Score = 105 (42.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 19 DGSAFEKCDR--CEAMVPIALVDMHECEAKVKNKV--KRFKGVCEKPKLVKQDSYSDQTR 74
D S F +C+ C +P+ LV MH C A + + F + K S +
Sbjct: 8 DSSIFARCEDVDCNKKIPVELVRMHICYAMFHRTLAARGFGTQTQAKKKPTNKKKSTTSL 67
Query: 75 SPFRIFMETF---VETCGSRELIDIDQK-GFEKWKNMSKEERQPYVIKA 119
+ F +FM F T + L+ K G+E WK+M+++E++ Y+ KA
Sbjct: 68 TDFAVFMNHFRKSFRTDYNGALVKEGSKIGWEMWKSMTEDEKKDYLDKA 116
>TAIR|locus:2154433 [details] [associations]
symbol:HMGB6 "high-mobility group box 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P07155 EMBL:AB018110 HOGENOM:HOG000242532 EMBL:AK118688
EMBL:AY086023 IPI:IPI00542717 RefSeq:NP_568431.1 UniGene:At.31011
ProteinModelPortal:Q8LDF9 SMR:Q8LDF9 STRING:Q8LDF9 PaxDb:Q8LDF9
PRIDE:Q8LDF9 EnsemblPlants:AT5G23420.1 GeneID:832408
KEGG:ath:AT5G23420 TAIR:At5g23420 eggNOG:NOG297541
InParanoid:Q8LDF9 OMA:AFFLFMD PhylomeDB:Q8LDF9
ProtClustDB:CLSN2689854 Genevestigator:Q8LDF9 Uniprot:Q8LDF9
Length = 241
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 2 ANQPRTRKRVHA---------IRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVK 52
+N P+ RKRV A +RRA DGSAF C+ C V +AL+ MH C K +V
Sbjct: 8 SNAPKQRKRVEAETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVN 67
Query: 53 RFKGVCE-KPKLVKQDSYSDQTRS 75
V E + + K+ + +T S
Sbjct: 68 LEAQVVETQAEAKKKPAEKKKTTS 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 205 205 0.00096 111 3 11 22 0.47 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 602 (64 KB)
Total size of DFA: 191 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.44u 0.07s 20.51t Elapsed: 00:00:01
Total cpu time: 20.44u 0.07s 20.51t Elapsed: 00:00:01
Start: Fri May 10 08:13:04 2013 End: Fri May 10 08:13:05 2013