Query         037990
Match_columns 492
No_of_seqs    178 out of 2029
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 06:25:46 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037990.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037990hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.9E-86   4E-91  629.7  45.1  460   16-490    25-488 (489)
  2 PLN00110 flavonoid 3',5'-hydro 100.0 1.8E-79 3.8E-84  600.5  43.6  472    9-490    23-497 (504)
  3 PLN02687 flavonoid 3'-monooxyg 100.0 4.4E-79 9.5E-84  601.5  46.1  472   15-490    32-509 (517)
  4 PLN02971 tryptophan N-hydroxyl 100.0 3.6E-79 7.9E-84  603.7  43.7  473    9-490    49-534 (543)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0 4.2E-79 9.2E-84  569.9  40.1  455   19-490    33-499 (499)
  6 PLN03112 cytochrome P450 famil 100.0 5.5E-78 1.2E-82  594.9  45.6  482    5-492    20-510 (514)
  7 PLN03234 cytochrome P450 83B1; 100.0 1.8E-77 3.8E-82  589.7  45.2  467   16-489    27-498 (499)
  8 PLN02183 ferulate 5-hydroxylas 100.0 2.9E-77 6.2E-82  588.5  44.9  461   16-490    35-512 (516)
  9 PLN02966 cytochrome P450 83A1  100.0 1.5E-76 3.4E-81  581.8  46.4  468   16-492    28-502 (502)
 10 PLN02394 trans-cinnamate 4-mon 100.0   7E-76 1.5E-80  578.9  44.9  462   16-490    29-502 (503)
 11 PTZ00404 cytochrome P450; Prov 100.0 1.9E-76 4.1E-81  579.8  40.5  449   16-489    28-482 (482)
 12 PLN02655 ent-kaurene oxidase   100.0   8E-76 1.7E-80  571.4  43.5  452   19-490     1-464 (466)
 13 PLN00168 Cytochrome P450; Prov 100.0 1.4E-75   3E-80  576.9  45.4  478    6-491    24-518 (519)
 14 PLN02290 cytokinin trans-hydro 100.0 1.9E-74   4E-79  570.1  38.7  449   16-490    41-515 (516)
 15 PLN03018 homomethionine N-hydr 100.0 2.2E-73 4.7E-78  558.1  45.6  467   16-490    39-524 (534)
 16 PLN02169 fatty acid (omega-1)- 100.0   6E-73 1.3E-77  553.2  38.8  447   19-489    33-499 (500)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-73 4.5E-78  552.6  35.2  452   15-490    33-496 (497)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 5.8E-73 1.3E-77  515.7  35.1  453   13-490    46-518 (519)
 19 PF00067 p450:  Cytochrome P450 100.0   3E-74 6.4E-79  566.8  28.9  429   19-461     1-441 (463)
 20 PLN02500 cytochrome P450 90B1  100.0 2.3E-72   5E-77  551.1  37.3  420   14-461    35-468 (490)
 21 PLN02774 brassinosteroid-6-oxi 100.0 4.3E-72 9.4E-77  544.7  33.3  429   16-488    30-462 (463)
 22 PLN02738 carotene beta-ring hy 100.0 6.9E-71 1.5E-75  545.9  42.3  429   40-490   152-595 (633)
 23 PLN03141 3-epi-6-deoxocathaste 100.0 1.8E-71 3.8E-76  539.3  37.2  434   13-490     3-450 (452)
 24 PLN03195 fatty acid omega-hydr 100.0 2.9E-71 6.3E-76  546.9  39.0  449   19-490    32-516 (516)
 25 PLN02196 abscisic acid 8'-hydr 100.0 7.9E-71 1.7E-75  535.4  34.9  428   12-488    30-461 (463)
 26 PLN02936 epsilon-ring hydroxyl 100.0 3.5E-69 7.6E-74  527.0  40.0  445   18-490    13-482 (489)
 27 PLN02302 ent-kaurenoic acid ox 100.0 2.5E-69 5.4E-74  532.2  37.8  438   14-491    39-489 (490)
 28 KOG0684 Cytochrome P450 [Secon 100.0 8.5E-69 1.8E-73  476.0  30.5  447   17-490    31-485 (486)
 29 PLN02987 Cytochrome P450, fami 100.0   3E-68 6.5E-73  515.2  36.1  432   16-490    29-469 (472)
 30 PLN02426 cytochrome P450, fami 100.0   3E-66 6.5E-71  505.2  39.9  437   25-490    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 9.8E-61 2.1E-65  458.9  28.0  420   13-460    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.2E-55 2.6E-60  419.2  30.3  359   42-460    25-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  76.8      11 0.00025   23.2   5.0   44  276-319     5-48  (48)
 34 PF05952 ComX:  Bacillus compet  45.9      14 0.00029   23.9   1.3   24  300-323     5-28  (57)
 35 PRK06789 flagellar motor switc  33.5      31 0.00068   23.7   1.7   41  341-381    20-62  (74)
 36 PF09201 SRX:  SRX;  InterPro:   31.5      48   0.001   25.8   2.5   23  430-452    18-40  (148)
 37 KOG3506 40S ribosomal protein   31.4      22 0.00048   22.4   0.6   11  423-433    12-22  (56)
 38 PF12508 DUF3714:  Protein of u  30.8      32  0.0007   29.1   1.7   44  335-380    51-94  (200)
 39 PF05261 Tra_M:  TraM protein,   30.6 2.3E+02   0.005   21.8   5.9   94  231-324    10-123 (127)
 40 PF14129 DUF4296:  Domain of un  30.5   2E+02  0.0043   20.5   5.5   49  274-322    30-78  (87)
 41 COG4471 Uncharacterized protei  29.7 1.8E+02  0.0039   20.8   4.8   35   46-80     19-53  (90)
 42 COG2101 SPT15 TATA-box binding  26.2      20 0.00044   29.1  -0.2   35  397-436    36-70  (185)
 43 PRK13505 formate--tetrahydrofo  24.5      60  0.0013   32.2   2.5   61  288-348   193-254 (557)
 44 PF13625 Helicase_C_3:  Helicas  23.5   2E+02  0.0043   22.3   4.9   40   40-81     75-114 (129)
 45 KOG0114 Predicted RNA-binding   23.5 3.2E+02  0.0069   20.4   5.3   60   16-80     11-76  (124)
 46 cd00477 FTHFS Formyltetrahydro  23.1      68  0.0015   31.5   2.6  110  228-348   115-237 (524)
 47 PHA03162 hypothetical protein;  22.0      76  0.0017   24.4   2.1   24  426-449     2-25  (135)
 48 PF08285 DPM3:  Dolichol-phosph  21.8 1.2E+02  0.0027   21.9   3.1   27  296-322    55-81  (91)
 49 COG1759 5-formaminoimidazole-4  21.4 1.6E+02  0.0035   27.0   4.3   70  340-447   276-352 (361)
 50 PF13893 RRM_5:  RNA recognitio  21.4 2.2E+02  0.0048   17.7   4.2   35   46-80      2-40  (56)
 51 PF09926 DUF2158:  Uncharacteri  21.3      86  0.0019   20.0   1.9   17   52-68      3-19  (53)
 52 PF12444 Sox_N:  Sox developmen  21.0      76  0.0016   22.5   1.8   21  440-460    60-80  (84)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-86  Score=629.73  Aligned_cols=460  Identities=42%  Similarity=0.727  Sum_probs=405.2

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcc-cccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKI-YEAM   94 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~-~~~~   94 (492)
                      +++||||++||+|||++.++..  .++..+++|+++|||+|++++|..++|||++++.++|++.+++..|++|+. ....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            7999999999999999999761  399999999999999999999999999999999999999999999999997 2244


Q ss_pred             ccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHH
Q 037990           95 KGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        95 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                      ..+.+++.+++++++|+.|+.+||+....+++...++.....-.++++.+++.+.+...+++||+...+..++.++|+++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence            55555678899999999999999999999999999999988889999999999987213389999999999999999999


Q ss_pred             hhccccCCCCchhHHHHHHHHHHHHHhhCCccccccch-hhhhcCc-chhhhhhHHHHHHHHHHHHHHHHHHHhhh-hhc
Q 037990          175 MFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLP-ILRWLDP-QGIRKKTQFHVERAFEIAGGFIKERMEDN-EEK  251 (492)
Q Consensus       175 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~  251 (492)
                      +||.++...+++....+.+.+.......+...+.+++| ++.++.. .+..+.......++.++++.+|+++++.. .++
T Consensus       183 ~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~  262 (489)
T KOG0156|consen  183 LFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEE  262 (489)
T ss_pred             HhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence            99999987545556678899999999999988999999 6777642 24556666666678999999999987742 122


Q ss_pred             cccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCCChh
Q 037990          252 KKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKLEEE  331 (492)
Q Consensus       252 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  331 (492)
                      ..|+++.|+...++++...  ++++++.+.+.++++||.|||++|+.|++.+|++||++|+|+++||++++|.++.++.+
T Consensus       263 ~~D~vD~lL~~~~~~~~~~--~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~  340 (489)
T KOG0156|consen  263 GRDFVDALLKLMKEEKAEG--LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSES  340 (489)
T ss_pred             CCcHHHHHHHhhcccccCC--CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChh
Confidence            3799999999876532222  99999999999999999999999999999999999999999999999999988889999


Q ss_pred             hhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCCcc
Q 037990          332 DIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNYNM  411 (492)
Q Consensus       332 ~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~  411 (492)
                      |+.+||||+|+|+|++|++|++|+.++|.+.+|+.|+||.|||||.|+++.|++||||++|+||++|+||||++++ +  
T Consensus       341 D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d--  417 (489)
T KOG0156|consen  341 DLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-D--  417 (489)
T ss_pred             hhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-c--
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999974 1  


Q ss_pred             cccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeeccC
Q 037990          412 MVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       412 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (492)
                         .+.....++|||.|+|.|||..+|++++.+++++++++|+|+++++    .+++... +.++..+.|+.+...+|.
T Consensus       418 ---~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  418 ---GKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             ---ccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence               1224568999999999999999999999999999999999999876    3344444 366777889999988875


No 2  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.8e-79  Score=600.46  Aligned_cols=472  Identities=34%  Similarity=0.676  Sum_probs=382.4

Q ss_pred             cccccccCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccC
Q 037990            9 HKEELERQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGR   88 (492)
Q Consensus         9 ~~~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~   88 (492)
                      +-...++.++||||+++|++||+..++.   +++.++.+|+++||++|++++|++++|+|+||+++++++.+....|..+
T Consensus        23 ~~~~~~~~~~pPgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r   99 (504)
T PLN00110         23 SLLPKPSRKLPPGPRGWPLLGALPLLGN---MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNR   99 (504)
T ss_pred             HHhhcccCCCcccCCCCCeeechhhcCC---chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCC
Confidence            3334455689999999999999887765   6899999999999999999999999999999999999999877777777


Q ss_pred             ccccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHH
Q 037990           89 KIYEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMA  167 (492)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~  167 (492)
                      +..........++.+++++.+|+.|+++|+++++++|+++.++.+.+.+.++++.+++.+.+.. +|+++|+.+++..++
T Consensus       100 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~  179 (504)
T PLN00110        100 PPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSM  179 (504)
T ss_pred             CCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHH
Confidence            6543322222223456778889999999999986689999999999999999999999987654 678899999999999


Q ss_pred             HHHHHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 037990          168 FNLIGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED  247 (492)
Q Consensus       168 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  247 (492)
                      +|+|+.++||.++..........+...+...+.......+..++|++.|+......+......+.+.+++.+.++++++.
T Consensus       180 ~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        180 ANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999873222223355666666655544333344566766655322233445556677778888888877654


Q ss_pred             hh--hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCC
Q 037990          248 NE--EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPN  325 (492)
Q Consensus       248 ~~--~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  325 (492)
                      ..  ....|+++.+++...+  .++..++++++..+++++++||+|||+++++|++++|++||++|+|+++|++++++.+
T Consensus       260 ~~~~~~~~d~l~~ll~~~~~--~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  337 (504)
T PLN00110        260 AHERKGNPDFLDVVMANQEN--STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN  337 (504)
T ss_pred             ccccccCCChhhHHhhcccc--cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            21  2346999999975432  1345699999999999999999999999999999999999999999999999999877


Q ss_pred             CCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccC
Q 037990          326 KKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLE  405 (492)
Q Consensus       326 ~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~  405 (492)
                      +.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.||+|+.|+++++++|+||++|+||++|+||||++
T Consensus       338 ~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~  417 (504)
T PLN00110        338 RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLS  417 (504)
T ss_pred             CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccC
Confidence            78999999999999999999999999999877899999999999999999999999999999999999999999999996


Q ss_pred             CCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEe
Q 037990          406 PTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAI  485 (492)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (492)
                      ++.....  .+.....++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +.+.....++++.+..|+++.
T Consensus       418 ~~~~~~~--~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  492 (504)
T PLN00110        418 EKNAKID--PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAM  492 (504)
T ss_pred             CCCcccc--cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEe
Confidence            5422100  01123579999999999999999999999999999999999987663   223223456777788899999


Q ss_pred             eeccC
Q 037990          486 PIPYR  490 (492)
Q Consensus       486 ~~~r~  490 (492)
                      +++|-
T Consensus       493 ~~~r~  497 (504)
T PLN00110        493 VTPRL  497 (504)
T ss_pred             eccCC
Confidence            98874


No 3  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.4e-79  Score=601.49  Aligned_cols=472  Identities=40%  Similarity=0.739  Sum_probs=384.7

Q ss_pred             cCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccccc
Q 037990           15 RQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAM   94 (492)
Q Consensus        15 ~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~   94 (492)
                      +.+.||||.++|++||+..+..   +++.++.+|+++||++|++++|+.++++++||+.+++++.++...|..++.....
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLGP---KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCCCccCCCCCccccHHhcCC---chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            4578999999999999988876   7899999999999999999999999999999999999999877777777654333


Q ss_pred             ccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHH
Q 037990           95 KGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        95 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                      ......+.+++++.+|+.|+++|+++.++.|+.++++.+.+.+.++++.+++.+.+..+++++|+.+++..+++|+|+.+
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Confidence            32222245667888899999999999767899999999999999999999999976445678999999999999999999


Q ss_pred             hhccccCCCC-chhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhh---hh
Q 037990          175 MFSKDLLGPE-SERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDN---EE  250 (492)
Q Consensus       175 ~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~~  250 (492)
                      +||.++...+ ++....+...+..............++|++.|+......++..+..+.+.+++.++|+++++..   .+
T Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~  268 (517)
T PLN02687        189 MVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSE  268 (517)
T ss_pred             HhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCc
Confidence            9999976533 2233456666666555443333335667666553322234455567788888999998887652   13


Q ss_pred             ccccHHHHHHhhccCC--CCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCC
Q 037990          251 KKKDFLDVLLAFHGDG--VDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKL  328 (492)
Q Consensus       251 ~~~d~l~~ll~~~~~~--~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  328 (492)
                      ...|+++.|++...+.  ..++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++++.++.+
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  348 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV  348 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence            4579999999865431  11234699999999999999999999999999999999999999999999999999877789


Q ss_pred             ChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCC
Q 037990          329 EEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTN  408 (492)
Q Consensus       329 ~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  408 (492)
                      +++++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++++++||||++|+||++|+||||++++.
T Consensus       349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~  428 (517)
T PLN02687        349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE  428 (517)
T ss_pred             CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999997532


Q ss_pred             CcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeec
Q 037990          409 YNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIP  488 (492)
Q Consensus       409 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (492)
                      ... ...+..+..++|||+|+|.|+|++||++|+++++++|+++|++++.++..+.+.+.....++...+..++.+++++
T Consensus       429 ~~~-~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (517)
T PLN02687        429 HAG-VDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRP  507 (517)
T ss_pred             ccc-cccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeecc
Confidence            100 0012234589999999999999999999999999999999999987764332333333455666677789999988


Q ss_pred             cC
Q 037990          489 YR  490 (492)
Q Consensus       489 r~  490 (492)
                      |.
T Consensus       508 R~  509 (517)
T PLN02687        508 RL  509 (517)
T ss_pred             CC
Confidence            84


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.6e-79  Score=603.74  Aligned_cols=473  Identities=27%  Similarity=0.465  Sum_probs=372.0

Q ss_pred             cccccccCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcC-CcEEEecCCeeEEEecCHHHHHHHHHhCCccccc
Q 037990            9 HKEELERQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHG-PLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAG   87 (492)
Q Consensus         9 ~~~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~   87 (492)
                      +.++.++.++||||+++|++||+..+.... ..+.++.+|+++|| +++++++|++++|+|+||+.++++|.++...|..
T Consensus        49 ~~~~~r~~~lPPGP~~lPiiGnl~~l~~~~-~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~  127 (543)
T PLN02971         49 SSRNKKLHPLPPGPTGFPIVGMIPAMLKNR-PVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFAS  127 (543)
T ss_pred             hcccCCCCCCCcCCCCCCcccchHHhccCC-cHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcC
Confidence            344445578999999999999998774310 23678999999999 8999999999999999999999999998888888


Q ss_pred             CccccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHH
Q 037990           88 RKIYEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLM  166 (492)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~  166 (492)
                      ++..........+..+++++.+|+.|+++|+++.++++++..++.+.+.+.++++.+++.+.+.. .++++|+.+.+..+
T Consensus       128 rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  207 (543)
T PLN02971        128 RPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHY  207 (543)
T ss_pred             CCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHH
Confidence            87533322222222346788889999999999986788887777888999999999998887643 56789999999999


Q ss_pred             HHHHHHHHhhccccCCCC----chhHHHHHHHHHHHHHhhC---CccccccchhhhhcCcchhhhhhHHHHHHHHHHHHH
Q 037990          167 AFNLIGNLMFSKDLLGPE----SERGAKFSYHAGKVMELAG---KPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGG  239 (492)
Q Consensus       167 ~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~  239 (492)
                      ++++|++++||.++....    ++........++..+....   ...+.+++|++.++......+......+.+.+++.+
T Consensus       208 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  287 (543)
T PLN02971        208 CGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDP  287 (543)
T ss_pred             HHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHH
Confidence            999999999999874321    1111122233333332211   112345566665542122233444456777888888


Q ss_pred             HHHHHHhh-h-h--hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHH
Q 037990          240 FIKERMED-N-E--EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQ  315 (492)
Q Consensus       240 ~i~~r~~~-~-~--~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~  315 (492)
                      +|+++++. . .  ....|+++.|++..+++  ....++++++..++.++++||+|||+++++|++++|++||++|+|++
T Consensus       288 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~  365 (543)
T PLN02971        288 IIDERIKMWREGKRTQIEDFLDIFISIKDEA--GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAM  365 (543)
T ss_pred             HHHHHHHHHhccCCCCCcCHHHHHHhhhccc--CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence            88887653 1 1  12469999999864321  11248999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCC
Q 037990          316 DELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDP  395 (492)
Q Consensus       316 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p  395 (492)
                      +||++++++++.++++++++|||++|||+|+||++|+++..++|.+.+|++++||.||||+.|+++++++||||++|+||
T Consensus       366 ~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP  445 (543)
T PLN02971        366 EEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDP  445 (543)
T ss_pred             HHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCc
Confidence            99999998888899999999999999999999999999987889999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCccccccccccee
Q 037990          396 LLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGIT  475 (492)
Q Consensus       396 ~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  475 (492)
                      ++|+||||++++...   .....+..++|||.|+|.|+|++||++|+++++++|+++|+|++.++..  +.++...++ +
T Consensus       446 ~~F~PeRfl~~~~~~---~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~  519 (543)
T PLN02971        446 LSFKPERHLNECSEV---TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-D  519 (543)
T ss_pred             cccCcccCCCCCccc---cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-c
Confidence            999999999754220   0112345799999999999999999999999999999999999876532  345545556 6


Q ss_pred             eccCCCeeEeeeccC
Q 037990          476 LRKSVPLKAIPIPYR  490 (492)
Q Consensus       476 ~~~~~~~~~~~~~r~  490 (492)
                      +..+.++.+.+++|.
T Consensus       520 ~~~~~~~~~~~~~~~  534 (543)
T PLN02971        520 MFLSKPLVMVGELRL  534 (543)
T ss_pred             ccccccceeeeeecC
Confidence            656668999999884


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.2e-79  Score=569.90  Aligned_cols=455  Identities=24%  Similarity=0.373  Sum_probs=361.6

Q ss_pred             CCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCc--ccccccc
Q 037990           19 PPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRK--IYEAMKG   96 (492)
Q Consensus        19 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~--~~~~~~~   96 (492)
                      .|+|+++|++||+..+.+.. .+.....+.+.+||+++.++.+.+|.++|.|||+|++|+.++.++|.++.  .+..-..
T Consensus        33 i~~~~p~p~~Gn~~~~~~~~-~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~  111 (499)
T KOG0158|consen   33 IPGPKPLPFLGNLPGMLKRE-RPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED  111 (499)
T ss_pred             CCCCCCCCcEecHHHHHhcc-CcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC
Confidence            47888899999999883311 23555555556669999999999999999999999999999999998843  3222221


Q ss_pred             ccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHHh
Q 037990           97 DYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIGNLM  175 (492)
Q Consensus        97 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~~~~  175 (492)
                        ......+|..+|++||++|..++ |.|++.+++.+.+.+.+.++++++.++++. .+..+++.+.+..+|.|||++++
T Consensus       112 --~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~A  188 (499)
T KOG0158|consen  112 --PLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCA  188 (499)
T ss_pred             --cccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhh
Confidence              11235567888999999999998 999999999999999999999999999864 33689999999999999999999


Q ss_pred             hccccCCCCchhHHHHHHHHHHHHHh-hCCc----cccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 037990          176 FSKDLLGPESERGAKFSYHAGKVMEL-AGKP----NVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEE  250 (492)
Q Consensus       176 fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  250 (492)
                      ||.+.+...++. ..+.......... ....    .....+|.+....  ............+.+.+...++.|.+ ...
T Consensus       189 fG~~~~s~~d~~-~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~-~~~  264 (499)
T KOG0158|consen  189 FGLDANSLRDPK-AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREK-ENI  264 (499)
T ss_pred             cccchhhhcCch-HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            999998876543 3333322222222 1111    1122333332210  11122334455566666667766633 245


Q ss_pred             ccccHHHHHHhhccC--CCCCCc-cCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCC
Q 037990          251 KKKDFLDVLLAFHGD--GVDEPA-KFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKK  327 (492)
Q Consensus       251 ~~~d~l~~ll~~~~~--~~~~~~-~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  327 (492)
                      .++|+++.|++++.+  .+.... .++.+||+++++.+++||.||||+|+++++|+||+||++|+|+|+||+++..+...
T Consensus       265 ~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~  344 (499)
T KOG0158|consen  265 ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEG  344 (499)
T ss_pred             CCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCC
Confidence            789999999998853  111222 59999999999999999999999999999999999999999999999999776555


Q ss_pred             CChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcC-ceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCC
Q 037990          328 LEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQ-GYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEP  406 (492)
Q Consensus       328 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  406 (492)
                      +|++.+++|+||++||+||||+||+++. +.|.+++|++++ ++.||||+.|.++++++||||++||||++|+||||..+
T Consensus       345 ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~  423 (499)
T KOG0158|consen  345 LTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEE  423 (499)
T ss_pred             CCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCC
Confidence            9999999999999999999999999999 679999999999 99999999999999999999999999999999999987


Q ss_pred             CCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEee
Q 037990          407 TNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIP  486 (492)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (492)
                      +.+      ...+..|+|||.|||.|+|++||.+|+|++|++||++|+++..+ .+..+ ......+++..++.++++++
T Consensus       424 ~~~------~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~~~l~pk~gi~Lkl  495 (499)
T KOG0158|consen  424 NNK------SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKGFTLSPKGGIWLKL  495 (499)
T ss_pred             ccc------ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCccceeeecCCceEEEE
Confidence            643      33567999999999999999999999999999999999999877 33232 22222377788899999999


Q ss_pred             eccC
Q 037990          487 IPYR  490 (492)
Q Consensus       487 ~~r~  490 (492)
                      .+|.
T Consensus       496 ~~r~  499 (499)
T KOG0158|consen  496 EPRD  499 (499)
T ss_pred             EeCC
Confidence            9884


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.5e-78  Score=594.92  Aligned_cols=482  Identities=35%  Similarity=0.640  Sum_probs=385.4

Q ss_pred             cccccccccccCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcc
Q 037990            5 RRHRHKEELERQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVV   84 (492)
Q Consensus         5 ~~~~~~~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~   84 (492)
                      .+.-|++..++.+.||||+++|++||+..++.   +++.++.+++++||++|++++|+.++++++||+.+++++.++...
T Consensus        20 ~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~---~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~   96 (514)
T PLN03112         20 WRWLNASMRKSLRLPPGPPRWPIVGNLLQLGP---LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDV   96 (514)
T ss_pred             HHHccccccCCCCCccCCCCCCeeeeHHhcCC---chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcc
Confidence            33445555566789999999999999988876   789999999999999999999999999999999999999887777


Q ss_pred             cccCccccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHH
Q 037990           85 LAGRKIYEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFI  163 (492)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~  163 (492)
                      |+.++.........++....+++.+|+.|+.+|+++.+++|+.++++.+.+.+.++++.+++.+.+.. .++++|+.+.+
T Consensus        97 f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~  176 (514)
T PLN03112         97 FASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVL  176 (514)
T ss_pred             cccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHH
Confidence            77766543222212223345677789999999999765789999999999999999999999876543 56789999999


Q ss_pred             HHHHHHHHHHHhhccccCCCCc---hhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHH
Q 037990          164 FLMAFNLIGNLMFSKDLLGPES---ERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGF  240 (492)
Q Consensus       164 ~~~~~~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  240 (492)
                      ..+++++++.++||.++.+...   +....+......+...........++|++.++.+....++.....+.+.+++...
T Consensus       177 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
T PLN03112        177 GAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKI  256 (514)
T ss_pred             HHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998754322   2234555655555544333334456676665533233345556677788888888


Q ss_pred             HHHHHhhh-----hhccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHH
Q 037990          241 IKERMEDN-----EEKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQ  315 (492)
Q Consensus       241 i~~r~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~  315 (492)
                      ++++++..     .....|+++.++++..++  ....++++++.+++.++++||+|||+++++|++++|++||++|++++
T Consensus       257 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~  334 (514)
T PLN03112        257 IDEHRRARSGKLPGGKDMDFVDVLLSLPGEN--GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQ  334 (514)
T ss_pred             HHHHHHhhcccccCCccchHHHHHHHhhccc--cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHH
Confidence            88776531     123469999999864331  22358999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCC
Q 037990          316 DELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDP  395 (492)
Q Consensus       316 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p  395 (492)
                      +|+++++++++.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.||+|+.|.++++++||||++|+||
T Consensus       335 ~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP  414 (514)
T PLN03112        335 EELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDV  414 (514)
T ss_pred             HHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCCh
Confidence            99999998777899999999999999999999999999987789999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCccccccccccee
Q 037990          396 LLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGIT  475 (492)
Q Consensus       396 ~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  475 (492)
                      ++||||||..+.+.... ........++|||.|+|.|+|++||++|+++++++|+++|+|++.++....++......++.
T Consensus       415 ~~F~PeRf~~~~~~~~~-~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  493 (514)
T PLN03112        415 EEFRPERHWPAEGSRVE-ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMT  493 (514)
T ss_pred             hhcCCcccCCCCCCccc-cccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcc
Confidence            99999998654211000 00122457999999999999999999999999999999999998755322334443445677


Q ss_pred             eccCCCeeEeeeccCCC
Q 037990          476 LRKSVPLKAIPIPYRGY  492 (492)
Q Consensus       476 ~~~~~~~~~~~~~r~~~  492 (492)
                      +++..++.+.+.+|.++
T Consensus       494 ~~~~~~~~~~~~~r~~~  510 (514)
T PLN03112        494 MPKAKPLRAVATPRLAP  510 (514)
T ss_pred             cccCCCeEEEeecCCcc
Confidence            77788999999999753


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.8e-77  Score=589.67  Aligned_cols=467  Identities=31%  Similarity=0.582  Sum_probs=378.4

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      .+.||||+++|++||+..+...  +++.++.+++++||++|++++|+.++|+++|||++++|+.++...|..++......
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~~--~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEKF--NPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCCC--CccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            5789999999999999888431  57889999999999999999999999999999999999998877777776543322


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                      .....+....+...++.|+++|+.+..++|++++++.+.+.+.++++++++.+.+.. +++++|+.+++..+++|+++.+
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            222223333455678999999998655899999999999999999999999997654 5678999999999999999999


Q ss_pred             hhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcC-cchhhhhhHHHHHHHHHHHHHHHHHHHhhh--hhc
Q 037990          175 MFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLD-PQGIRKKTQFHVERAFEIAGGFIKERMEDN--EEK  251 (492)
Q Consensus       175 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~  251 (492)
                      +||.+++.... ....+.+.............+...+|++.++. .....++..++.+.+.+++.+.|+++++..  ...
T Consensus       185 ~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  263 (499)
T PLN03234        185 AFGKRYNEYGT-EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQE  263 (499)
T ss_pred             HhCCcccccch-hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence            99999875432 23445555544443333333344556544331 122234566778888999999998876542  224


Q ss_pred             cccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCCChh
Q 037990          252 KKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKLEEE  331 (492)
Q Consensus       252 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  331 (492)
                      ..|+++.|++...++ ..+..++++++..++.++++||+|||+++++|++++|++||++|+++++|++++++++..++++
T Consensus       264 ~~d~l~~l~~~~~~~-~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~  342 (499)
T PLN03234        264 TESFIDLLMQIYKDQ-PFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEE  342 (499)
T ss_pred             cccHHHHHHHHhhcc-CcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence            578999998764331 1123589999999999999999999999999999999999999999999999999877789999


Q ss_pred             hhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCC-CCCCCCCCCcccCCCCCc
Q 037990          332 DIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTW-KDPLLFKPERFLEPTNYN  410 (492)
Q Consensus       332 ~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~  410 (492)
                      ++++|||++|||+|+||++|++++.++|.+.+|++++||.||+||.|+++++++||||++| +||++||||||+++....
T Consensus       343 ~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~  422 (499)
T PLN03234        343 DIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGV  422 (499)
T ss_pred             HHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCc
Confidence            9999999999999999999999987689999999999999999999999999999999999 899999999999754210


Q ss_pred             ccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeecc
Q 037990          411 MMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIPY  489 (492)
Q Consensus       411 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (492)
                         ..+..+..++|||+|+|.|+|+++|++|+++++++|+++|+|++.++..+.........++...++.++++.+++|
T Consensus       423 ---~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        423 ---DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ---CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence               0123356899999999999999999999999999999999999987644344444445688888888999998887


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.9e-77  Score=588.46  Aligned_cols=461  Identities=39%  Similarity=0.707  Sum_probs=368.1

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      .+.||||+++|++|++..+..   ..+.++.+|+++||++|++++|+.++|+|+||+++++|+.++...|+.++......
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQ---LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCC---cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            478999999999999987755   56788999999999999999999999999999999999998776677666433222


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHh
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGNLM  175 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~~~  175 (492)
                      ...+.+.+++++.+|+.|+++|+++..++|+.+.++.+.+.+ ++++.+++.+... .|+++|+.+++..+++|+++.++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~vi~~~~  189 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN-IGKPVNIGELIFTLTRNITYRAA  189 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc-CCCcEeHHHHHHHHHHHHHHhHh
Confidence            222223456788889999999999544889999999888864 5789999998653 56789999999999999999999


Q ss_pred             hccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh---h----
Q 037990          176 FSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED---N----  248 (492)
Q Consensus       176 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~----  248 (492)
                      ||..++..    ...+.+.+..+............+|++.++.+....++.....+.+.+++.++|++++++   .    
T Consensus       190 fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        190 FGSSSNEG----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             hcCcccch----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            99876431    134555555544433333344566766655222233455566777888888888776543   1    


Q ss_pred             --hhccccHHHHHHhhccCCC--------CCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 037990          249 --EEKKKDFLDVLLAFHGDGV--------DEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDEL  318 (492)
Q Consensus       249 --~~~~~d~l~~ll~~~~~~~--------~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei  318 (492)
                        .+...|+++.+++...+..        ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence              0124689999998543210        012358999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCC
Q 037990          319 RSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLF  398 (492)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  398 (492)
                      +++++.++.++++++++||||+|||+|+||++|++++. .|.+.+|++++||.||||+.|+++.+++||||++|+||++|
T Consensus       346 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F  424 (516)
T PLN02183        346 ADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTF  424 (516)
T ss_pred             HHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcccc
Confidence            99998667789999999999999999999999999995 59999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeecc
Q 037990          399 KPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRK  478 (492)
Q Consensus       399 ~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (492)
                      +||||++++...    .....+.|+|||.|+|.|+|++||++|+++++|+|+++|++++.++....+.+....++....+
T Consensus       425 ~PeRfl~~~~~~----~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  500 (516)
T PLN02183        425 KPSRFLKPGVPD----FKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPR  500 (516)
T ss_pred             CchhhCCCCCcc----ccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccccc
Confidence            999999754221    1223458999999999999999999999999999999999998776433233333334555556


Q ss_pred             CCCeeEeeeccC
Q 037990          479 SVPLKAIPIPYR  490 (492)
Q Consensus       479 ~~~~~~~~~~r~  490 (492)
                      .+++.+.+++|-
T Consensus       501 ~~~~~~~~~~r~  512 (516)
T PLN02183        501 ATRLVAVPTYRL  512 (516)
T ss_pred             CCCcEEEeecCC
Confidence            778999988873


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.5e-76  Score=581.83  Aligned_cols=468  Identities=31%  Similarity=0.577  Sum_probs=368.5

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      .+.||||+++|++||++.+...  +++.++.+|+++||++|++++|+.++|+|+||+.+++++.++...|.+++......
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~~--~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~  105 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQKL--NPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE  105 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCCC--ChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence            4789999999999999887321  68899999999999999999999999999999999999998776666555433222


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                      ....+.....+..+|+.|+.+|+++..++|++++++.+.+.+.++++++++.|.+.. .++.+|+.+++..+++|+|+.+
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence            222222334466679999999999444899999999999999999999999997654 5678999999999999999999


Q ss_pred             hhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcC-cchhhhhhHHHHHHHHHHHHHHHHHHHhhh--hhc
Q 037990          175 MFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLD-PQGIRKKTQFHVERAFEIAGGFIKERMEDN--EEK  251 (492)
Q Consensus       175 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~  251 (492)
                      +||.+++..+. ....+.+.+...........+..++|++..+. .....+......+.+.+++.+.++++.+..  ...
T Consensus       186 ~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (502)
T PLN02966        186 AFGKKYNEDGE-EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPE  264 (502)
T ss_pred             HhCCccCccch-HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            99999875432 23445555554444433333344455433221 111112223345556666777776654321  123


Q ss_pred             cccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC--CCCCC
Q 037990          252 KKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP--NKKLE  329 (492)
Q Consensus       252 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~--~~~~~  329 (492)
                      ..|+++.|++..+++ ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+++++++  ++.++
T Consensus       265 ~~~~l~~l~~~~~~~-~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~  343 (502)
T PLN02966        265 TESMIDLLMEIYKEQ-PFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVT  343 (502)
T ss_pred             cccHHHHHHHHHhcc-CcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCC
Confidence            468999999765431 123458999999999999999999999999999999999999999999999999874  34689


Q ss_pred             hhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCC-CCCCCCCCCcccCCCC
Q 037990          330 EEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTW-KDPLLFKPERFLEPTN  408 (492)
Q Consensus       330 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~  408 (492)
                      ++|+++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++++++||||++| |||++|+||||++++.
T Consensus       344 ~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~  423 (502)
T PLN02966        344 EDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV  423 (502)
T ss_pred             HhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC
Confidence            999999999999999999999999987789999999999999999999999999999999999 9999999999997532


Q ss_pred             CcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeec
Q 037990          409 YNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIP  488 (492)
Q Consensus       409 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (492)
                      .     ....+..++|||.|+|+|+|++||++|+++++++|+++|+|++.++.....++.....++...++.++++..++
T Consensus       424 ~-----~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        424 D-----FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             C-----cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEe
Confidence            2     11234579999999999999999999999999999999999998775443444444456666555578888887


Q ss_pred             cCCC
Q 037990          489 YRGY  492 (492)
Q Consensus       489 r~~~  492 (492)
                      .+-|
T Consensus       499 ~~~~  502 (502)
T PLN02966        499 VNKY  502 (502)
T ss_pred             CCCC
Confidence            7665


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7e-76  Score=578.91  Aligned_cols=462  Identities=34%  Similarity=0.557  Sum_probs=357.4

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      .+.||||+++|++|++..+...  ..+..+.+|+++||++|++++|++++|+|+||+.+++++.++...+..++....+.
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCC--chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            5789999999999999877541  25789999999999999999999999999999999999988766666655433333


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE--ACAPIDVGRFIFLMAFNLIGN  173 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--~g~~vd~~~~~~~~~~~vi~~  173 (492)
                      ...+.+.+.+++.+|+.|+++|+.+..++|+++.++.+.+.+.++++++++.+.+..  .++.+|+.+++..+++|+++.
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            333334567788889999999999876889999999999999999999999997643  345699999999999999999


Q ss_pred             HhhccccCCCCchhHHHHHHHHHHHHHhhCC--ccccccchhhhhcCcchhhhhhHHHHHHHHH-HHHHHHHHHHhhh--
Q 037990          174 LMFSKDLLGPESERGAKFSYHAGKVMELAGK--PNVADFLPILRWLDPQGIRKKTQFHVERAFE-IAGGFIKERMEDN--  248 (492)
Q Consensus       174 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~r~~~~--  248 (492)
                      ++||.+++..+++....+.............  ..+..++|++.+. .....+..........+ +...+++++++..  
T Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (503)
T PLN02394        187 MMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKKLMSA  265 (503)
T ss_pred             HHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999998754433223332332222222111  1122334444322 11111111221222222 3334555554421  


Q ss_pred             ----hhccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC
Q 037990          249 ----EEKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP  324 (492)
Q Consensus       249 ----~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~  324 (492)
                          .+...|+++.|+++..+     ..++++++..++.++++||+|||+++++|++++|++||++|+++++||+++++.
T Consensus       266 ~~~~~~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~  340 (503)
T PLN02394        266 KGMDKEGLKCAIDHILEAQKK-----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP  340 (503)
T ss_pred             ccCCcchhhhHHHHHHhcccc-----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence                12346899999986533     348999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCccc
Q 037990          325 NKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFL  404 (492)
Q Consensus       325 ~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~  404 (492)
                      +..++++++++||||+|||+|+||++|++++.++|.+.+|++++||.||+||.|.++++++||||++|+||++|+||||+
T Consensus       341 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl  420 (503)
T PLN02394        341 GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL  420 (503)
T ss_pred             CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence            67789999999999999999999999999998789999999999999999999999999999999999999999999998


Q ss_pred             CCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccc-eeeccCCCee
Q 037990          405 EPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMG-ITLRKSVPLK  483 (492)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  483 (492)
                      ++++...   .+.....++|||.|+|.|+|++||++|+++++++|+++|++++.++.+  ..+.....+ +....+.+++
T Consensus       421 ~~~~~~~---~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        421 EEEAKVE---ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             CCCCccc---ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCce
Confidence            7542200   122345799999999999999999999999999999999999877642  233332332 4554566899


Q ss_pred             EeeeccC
Q 037990          484 AIPIPYR  490 (492)
Q Consensus       484 ~~~~~r~  490 (492)
                      +.+.+|.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999885


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.9e-76  Score=579.83  Aligned_cols=449  Identities=26%  Similarity=0.423  Sum_probs=357.3

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      .+.+|||+++|++||+..+..   +++.++.+|+++||++|++++|+.++|+++||+++++|+.++...|..++......
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            577899999999999988876   78999999999999999999999999999999999999988766666555433222


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                      .... +.+ +++.+|+.|+++|++++ +.|+...++.+.+.+.+.++.+++.|.+.. .++.+|+.+++..+++|+|+.+
T Consensus       105 ~~~~-~~~-l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        105 HGTF-YHG-IVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             eecc-CCc-eeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            1111 333 55678999999999998 889999999999999999999999997654 5677999999999999999999


Q ss_pred             hhccccCCCCc---hhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh-hhh
Q 037990          175 MFSKDLLGPES---ERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED-NEE  250 (492)
Q Consensus       175 ~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-~~~  250 (492)
                      +||.+++..++   +....+...+..++.......+...++++.... ...........+.+.+++.+.++++++. +.+
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  260 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE  260 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            99998864322   222455555555554443322222333222110 1111223345666777777777666543 222


Q ss_pred             ccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCCCh
Q 037990          251 KKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKLEE  330 (492)
Q Consensus       251 ~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  330 (492)
                      ...|+++.|+++..+.    ...+.+++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++++..+++
T Consensus       261 ~~~dll~~ll~~~~~~----~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~  336 (482)
T PTZ00404        261 VPRDLLDLLIKEYGTN----TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLL  336 (482)
T ss_pred             CcccHHHHHHHHhccC----CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCc
Confidence            4579999999864321    112334588999999999999999999999999999999999999999999987677899


Q ss_pred             hhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCc-CceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCC
Q 037990          331 EDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNM-QGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNY  409 (492)
Q Consensus       331 ~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~  409 (492)
                      +++++||||+|||+|+||++|+++..++|.+.+|+++ +||.||+|+.|.++++++||||++||||++||||||++..  
T Consensus       337 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~--  414 (482)
T PTZ00404        337 SDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD--  414 (482)
T ss_pred             cccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC--
Confidence            9999999999999999999999997678999999999 9999999999999999999999999999999999998642  


Q ss_pred             cccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeecc
Q 037990          410 NMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIPY  489 (492)
Q Consensus       410 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (492)
                              .+..++|||.|+|.|+|++||++|+++++++++++|++++.++.   +.......++++. +.++.+.+++|
T Consensus       415 --------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 --------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             --------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeec-CCCceeeeecC
Confidence                    23478999999999999999999999999999999999986653   2222223456666 55789988876


No 12 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=8e-76  Score=571.38  Aligned_cols=452  Identities=27%  Similarity=0.465  Sum_probs=362.3

Q ss_pred             CCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccccccccc
Q 037990           19 PPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMKGDY   98 (492)
Q Consensus        19 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~~~~   98 (492)
                      ||||+++|++||++.+...  +++.++.+|+++||++|++++|++++++|+||+.+++|+.++...|+.++.......+.
T Consensus         1 ppgp~~lP~iG~l~~~~~~--~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~   78 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEK--KPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT   78 (466)
T ss_pred             CcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh
Confidence            7899999999999888531  58999999999999999999999999999999999999998877777766443333232


Q ss_pred             CCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc---CCCceehHHHHHHHHHHHHHHHh
Q 037990           99 GTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE---ACAPIDVGRFIFLMAFNLIGNLM  175 (492)
Q Consensus        99 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~---~g~~vd~~~~~~~~~~~vi~~~~  175 (492)
                      +.+..+.+..+|+.|+++|+.+.+++|+...++.+.+.+.+.++.+++.+.+..   .++++|+.+++..+++|+++.++
T Consensus        79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  158 (466)
T PLN02655         79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQA  158 (466)
T ss_pred             cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHH
Confidence            222234444568999999998877889988889999999999888888886542   46789999999999999999999


Q ss_pred             hccccCCCCchh-------HHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh-
Q 037990          176 FSKDLLGPESER-------GAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED-  247 (492)
Q Consensus       176 fG~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-  247 (492)
                      ||.++.......       ...+...+..+........+..++|.++|+......+........+.+++...+++++++ 
T Consensus       159 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (466)
T PLN02655        159 LGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRI  238 (466)
T ss_pred             hccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999876533111       122333333344333333344567776666322222333333444557777888776654 


Q ss_pred             -hhhccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCC
Q 037990          248 -NEEKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNK  326 (492)
Q Consensus       248 -~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  326 (492)
                       ......|+++.+++..       ..++++++..++.++++||+|||+++++|++++|++||++|+++++|++++++++.
T Consensus       239 ~~~~~~~d~l~~ll~~~-------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~  311 (466)
T PLN02655        239 ARGEERDCYLDFLLSEA-------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER  311 (466)
T ss_pred             cCCCCcccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC
Confidence             2223468999999754       24899999999999999999999999999999999999999999999999998644


Q ss_pred             CCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCC
Q 037990          327 KLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEP  406 (492)
Q Consensus       327 ~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  406 (492)
                       ++++++++||||+|||+|+||++|+++.+.+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++
T Consensus       312 -~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~  390 (466)
T PLN02655        312 -VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGE  390 (466)
T ss_pred             -CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCC
Confidence             9999999999999999999999999999778999999999999999999999999999999999999999999999975


Q ss_pred             CCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEee
Q 037990          407 TNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIP  486 (492)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (492)
                      +..      ......++|||+|+|.|+|++||.+|+++++++|+++|++++.++.. +.   ....+++..++.++.|.+
T Consensus       391 ~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~  460 (466)
T PLN02655        391 KYE------SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHL  460 (466)
T ss_pred             Ccc------cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEE
Confidence            422      11235789999999999999999999999999999999999876632 11   123567777888999999


Q ss_pred             eccC
Q 037990          487 IPYR  490 (492)
Q Consensus       487 ~~r~  490 (492)
                      ++|.
T Consensus       461 ~~r~  464 (466)
T PLN02655        461 KPRG  464 (466)
T ss_pred             eecC
Confidence            8875


No 13 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-75  Score=576.92  Aligned_cols=478  Identities=28%  Similarity=0.445  Sum_probs=368.0

Q ss_pred             ccccccccccCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCccc
Q 037990            6 RHRHKEELERQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVL   85 (492)
Q Consensus         6 ~~~~~~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~   85 (492)
                      .+.+..+.+.+++||||+++|++||+..+.....+++.++.+|+++||++|++++|+.++|+|+||+.+++++.++...|
T Consensus        24 ~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f  103 (519)
T PLN00168         24 KHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAAL  103 (519)
T ss_pred             hhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCcc
Confidence            34555555667899999999999998765321115788999999999999999999999999999999999999887777


Q ss_pred             ccCccccccccccCCCceEE-eccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHH
Q 037990           86 AGRKIYEAMKGDYGTEGSII-TSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFI  163 (492)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~  163 (492)
                      +.++........ +.+.+++ +..+|+.|+++||.+..++|+++.++.+.+.+.++++.+++.+.+.. .++.+|+.+.+
T Consensus       104 ~~rp~~~~~~~~-~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~  182 (519)
T PLN00168        104 ADRPAVASSRLL-GESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETF  182 (519)
T ss_pred             ccCCcccchhhh-ccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHH
Confidence            777653322222 2122222 34679999999885444899999999999999999999999998654 44578999999


Q ss_pred             HHHHHHHHHHHhhccccCCCCchhHHHHHHHHHHHHHhh-CCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHH
Q 037990          164 FLMAFNLIGNLMFSKDLLGPESERGAKFSYHAGKVMELA-GKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIK  242 (492)
Q Consensus       164 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  242 (492)
                      ..++.++|+.++||.+++..   ....+........... ....+..++|.+.+.......++.....+.+.+++.++|+
T Consensus       183 ~~~~~~ii~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  259 (519)
T PLN00168        183 QYAMFCLLVLMCFGERLDEP---AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLID  259 (519)
T ss_pred             HHHHHHHHHHHHcCCCcChh---hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987531   1122333333222211 1223345556443221111223444567788888888888


Q ss_pred             HHHhhh----h-h--------ccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChH
Q 037990          243 ERMEDN----E-E--------KKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPE  309 (492)
Q Consensus       243 ~r~~~~----~-~--------~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~  309 (492)
                      ++++..    . .        ...|+++.|++..... ..+..++++++..++.++++||+|||+++++|++++|++||+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~  338 (519)
T PLN00168        260 ARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPE-DGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPS  338 (519)
T ss_pred             HHHHHhhhccccCccccccccccccHHHHHHhhhccc-cccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHH
Confidence            776531    0 0        1458999999764321 123469999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCC-CCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccC
Q 037990          310 TLKKVQDELRSVVSPN-KKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRD  388 (492)
Q Consensus       310 ~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d  388 (492)
                      +|+|+++||+++++++ +.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|+++++++|||
T Consensus       339 ~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d  418 (519)
T PLN00168        339 IQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRD  418 (519)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcC
Confidence            9999999999999753 678999999999999999999999999998778999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCccccc
Q 037990          389 PKTWKDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDM  468 (492)
Q Consensus       389 ~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~  468 (492)
                      |++||||++|+||||++.............++.++|||.|+|.|+|++||++|+++++++|+++|+|++.++..   .+.
T Consensus       419 ~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~  495 (519)
T PLN00168        419 EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDF  495 (519)
T ss_pred             ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CCh
Confidence            99999999999999987432100000112345799999999999999999999999999999999999876532   222


Q ss_pred             ccccceeeccCCCeeEeeeccCC
Q 037990          469 TERMGITLRKSVPLKAIPIPYRG  491 (492)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~r~~  491 (492)
                      ....+++..++.++.+++++|..
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             hhhceeEEeecCCcEEEEEeccC
Confidence            22234455556689999988863


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.9e-74  Score=570.10  Aligned_cols=449  Identities=21%  Similarity=0.347  Sum_probs=351.6

Q ss_pred             CCCCCCCCCCcccccccccCCC----------------CCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHH
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWM----------------PMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFK   79 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~----------------~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~   79 (492)
                      ++-||||+++|++||+..+...                ..+....+.+|+++||++|++++|+.++|+|+||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            4568999999999998776310                002334678999999999999999999999999999999998


Q ss_pred             hCCcccccCccccc--cccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-C-CC
Q 037990           80 NHDVVLAGRKIYEA--MKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-A-CA  155 (492)
Q Consensus        80 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~-g~  155 (492)
                      ++. .+..++....  .....  +.+ ++..+|+.|+++|++++ +.|+..+++.+.+.+.++++.+++.+.+.. . +.
T Consensus       121 ~~~-~~~~r~~~~~~~~~~~~--g~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        121 KYN-TVTGKSWLQQQGTKHFI--GRG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             cCC-CCCCCcchhhhHHHHHh--cCC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            763 3444442211  11111  333 45567999999999998 889999999999999999999999998653 3 35


Q ss_pred             ceehHHHHHHHHHHHHHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHH
Q 037990          156 PIDVGRFIFLMAFNLIGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFE  235 (492)
Q Consensus       156 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~  235 (492)
                      .+|+.+++..+++|+|+.++||.++...     ..+...+..+............+|++.++ +....+......+.+.+
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVER  269 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHH
Confidence            7999999999999999999999987532     12222222222211111111224444444 22233445556778888


Q ss_pred             HHHHHHHHHHhhhh-----hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHH
Q 037990          236 IAGGFIKERMEDNE-----EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPET  310 (492)
Q Consensus       236 ~~~~~i~~r~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~  310 (492)
                      ++.+.|+++++...     ....|+++.+++...+...++..++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~v  349 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTW  349 (516)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHH
Confidence            88899988765411     1347999999986433212234588999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCC
Q 037990          311 LKKVQDELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPK  390 (492)
Q Consensus       311 ~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~  390 (492)
                      |+|+++|++++++++ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.||+|+.|+++.+++||||+
T Consensus       350 q~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~  427 (516)
T PLN02290        350 QDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEE  427 (516)
T ss_pred             HHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChh
Confidence            999999999999864 78999999999999999999999999997 6899999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccc
Q 037990          391 TW-KDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMT  469 (492)
Q Consensus       391 ~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~  469 (492)
                      +| +||++||||||++.+.        .....++|||.|+|.|+|++||++|+++++++|+++|++++.++..     ..
T Consensus       428 ~~~~dP~~F~PeRfl~~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~  494 (516)
T PLN02290        428 LWGKDANEFNPDRFAGRPF--------APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HA  494 (516)
T ss_pred             hhCCChhhcCccccCCCCC--------CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cC
Confidence            99 8999999999995421        1224789999999999999999999999999999999999876532     11


Q ss_pred             cccceeeccCCCeeEeeeccC
Q 037990          470 ERMGITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~r~  490 (492)
                      ...+.+..|..++.+++++|.
T Consensus       495 ~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        495 PVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ccceeeecCCCCCeEEEEeCC
Confidence            123567778888999998875


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.2e-73  Score=558.13  Aligned_cols=467  Identities=26%  Similarity=0.480  Sum_probs=352.4

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCC-cHHHHHHHHhc-CCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPP-HASFAILAHKH-GPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEA   93 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~-~~~~~~~~~ky-G~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~   93 (492)
                      .++||||+++|++||++.+...  ++ ..+++++.++| |+||++++|++++|+|+||+.+++++.++...|+.++....
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~--~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMT--RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccC--CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            3589999999999999887320  23 24566777776 79999999999999999999999999988777887775443


Q ss_pred             cccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHH
Q 037990           94 MKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIG  172 (492)
Q Consensus        94 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~  172 (492)
                      .......+.++++..+|+.|+++|+++++.+++......+.+.+..+++++++.+.+.. .++++|+.+++..+++|+|+
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            33332222346666679999999999985555665556666677778899999998643 45679999999999999999


Q ss_pred             HHhhccccCCCCc------hhHHHHHHHHHHHHHh---hCCccccccch-hhhhcCcchhhhhhHHHHHHHHHHHHHHHH
Q 037990          173 NLMFSKDLLGPES------ERGAKFSYHAGKVMEL---AGKPNVADFLP-ILRWLDPQGIRKKTQFHVERAFEIAGGFIK  242 (492)
Q Consensus       173 ~~~fG~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  242 (492)
                      .++||.++.....      .....+......+...   .......+.+| ++.++.......+.......+.+++.++++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999854211      1111122122222111   11111222333 343221112223344455677888888888


Q ss_pred             HHHhh---hhh--ccccHHHHHHhhccCCCCCCc-cCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHH
Q 037990          243 ERMED---NEE--KKKDFLDVLLAFHGDGVDEPA-KFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQD  316 (492)
Q Consensus       243 ~r~~~---~~~--~~~d~l~~ll~~~~~~~~~~~-~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~  316 (492)
                      ++++.   ..+  ...|+++.|++...+   ++. .++++++..++.++++||+|||+++++|++++|+.||++|+++++
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        277 ERVELWREKGGKAAVEDWLDTFITLKDQ---NGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHHhhhccCCCCcccHHHHHHHhhcc---cCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            87653   111  246999999976533   222 489999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCC
Q 037990          317 ELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPL  396 (492)
Q Consensus       317 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  396 (492)
                      ||+++++.++.++.+++++||||+|||+|+||++|+++...+|++.+|++++||.||||+.|+++.+++|+||++|+||+
T Consensus       354 Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~  433 (534)
T PLN03018        354 ELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPL  433 (534)
T ss_pred             HHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcc
Confidence            99999987778999999999999999999999999999876899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceee
Q 037990          397 LFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITL  476 (492)
Q Consensus       397 ~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (492)
                      +|+||||+++++..........+..++|||.|+|.|+|++||.+|+++++++|+++|++++.++..  +.+.....+++.
T Consensus       434 ~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~  511 (534)
T PLN03018        434 VYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDASLL  511 (534)
T ss_pred             ccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCcccccccee
Confidence            999999997543210000112345789999999999999999999999999999999999866531  222222234444


Q ss_pred             ccCCCeeEeeeccC
Q 037990          477 RKSVPLKAIPIPYR  490 (492)
Q Consensus       477 ~~~~~~~~~~~~r~  490 (492)
                      . +.+++|++++|.
T Consensus       512 ~-p~~~~v~~~~R~  524 (534)
T PLN03018        512 M-AKPLLLSVEPRL  524 (534)
T ss_pred             c-CCCeEEEEEecc
Confidence            4 458999999884


No 16 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6e-73  Score=553.23  Aligned_cols=447  Identities=21%  Similarity=0.320  Sum_probs=337.4

Q ss_pred             CCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEE---EecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           19 PPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMT---LWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        19 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~---i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      -|||+++|++||+..+.......++++.+..++||..++   +++|+.++++|+||+.+++|+.++...|..+..+....
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~  112 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF  112 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH
Confidence            379999999999977733111233444444455886555   67899999999999999999988766666554332222


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhh--cHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDA--TRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIG  172 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~  172 (492)
                      ..  .+.+ +++.+|+.|+++||++. +.|+...+..  ..+.+.++++.+++.+.+.. .++.+|+.+.+..+++|+|+
T Consensus       113 ~~--~g~g-l~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        113 DV--LGEG-ILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             Hh--hcCc-ccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            21  1334 45567999999999998 8998887764  34667788888988887653 56789999999999999999


Q ss_pred             HHhhccccCCCCch-hHHHHHHHHHHHHHhhCCccccccchhh-----hhcCcchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 037990          173 NLMFSKDLLGPESE-RGAKFSYHAGKVMELAGKPNVADFLPIL-----RWLDPQGIRKKTQFHVERAFEIAGGFIKERME  246 (492)
Q Consensus       173 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~  246 (492)
                      .++||.+.+..+.. ....+.............   ..+.|++     .++ .....++...+.+.+.+++.++|++|++
T Consensus       189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~r~~  264 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTALATVNRMFAKIISSRRK  264 (500)
T ss_pred             hheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987643321 113344443333222111   1122321     122 2223455677888999999999998876


Q ss_pred             hhh------hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhh
Q 037990          247 DNE------EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRS  320 (492)
Q Consensus       247 ~~~------~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~  320 (492)
                      +..      +...|+++.+++...+.......++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++
T Consensus       265 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~  344 (500)
T PLN02169        265 EEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINT  344 (500)
T ss_pred             HhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHh
Confidence            411      12368999999764221111234788999999999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCccccccccc-CCcCceeeCCCCEEEEeeeecccCCCCC-CCCCCC
Q 037990          321 VVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDS-CNMQGYYIPKETQILVNVWAIGRDPKTW-KDPLLF  398 (492)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~-~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F  398 (492)
                      ++      +++|+++||||+|||+|+||++|++|... |.+.+| +.++|+.||+|+.|+++++++||||++| +||++|
T Consensus       345 v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F  417 (500)
T PLN02169        345 KF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDF  417 (500)
T ss_pred             hC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhc
Confidence            64      67999999999999999999999999965 555555 5559999999999999999999999999 899999


Q ss_pred             CCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeecc
Q 037990          399 KPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRK  478 (492)
Q Consensus       399 ~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (492)
                      |||||+++++..    ....++.|+|||+|+|.|+|++||++|+++++++|+++|+|++.++.   +.  ....+++..+
T Consensus       418 ~PeRfl~~~~~~----~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~l~~  488 (500)
T PLN02169        418 KPERWISDNGGL----RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSILLRM  488 (500)
T ss_pred             CccccCCCCCCc----cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceEEec
Confidence            999999754320    01135689999999999999999999999999999999999987552   12  2235677888


Q ss_pred             CCCeeEeeecc
Q 037990          479 SVPLKAIPIPY  489 (492)
Q Consensus       479 ~~~~~~~~~~r  489 (492)
                      +.++.+++++|
T Consensus       489 ~~gl~l~l~~~  499 (500)
T PLN02169        489 KHGLKVTVTKK  499 (500)
T ss_pred             CCCEEEEEEeC
Confidence            88999999887


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-73  Score=552.63  Aligned_cols=452  Identities=29%  Similarity=0.451  Sum_probs=362.4

Q ss_pred             cCCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccc-c
Q 037990           15 RQRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYE-A   93 (492)
Q Consensus        15 ~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~-~   93 (492)
                      +.+.||||.++|++|++..+.+...+...++.++..+||++|+.|+||.++++++||+.+++|+.++.......+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            457899999999999999985411256778899999999999999999999999999999999976555555555555 3


Q ss_pred             cccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 037990           94 MKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGN  173 (492)
Q Consensus        94 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~  173 (492)
                      .....  |.++++.. |+.|+++||++. +.|+...++.+...+.+....+...+.....++.+|+++.+..+++|+|+.
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            43443  34555555 999999999998 899999999999999999888888877654455599999999999999999


Q ss_pred             HhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccch-hhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhh---h
Q 037990          174 LMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLP-ILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDN---E  249 (492)
Q Consensus       174 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~  249 (492)
                      ++||......+.+....+..+++.+......   ....| +..++......++..++.+.++++++++|++|+++.   .
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999332222333344555666554443322   22233 333332222567788889999999999999998651   1


Q ss_pred             ----hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCC
Q 037990          250 ----EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPN  325 (492)
Q Consensus       250 ----~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  325 (492)
                          ....|+++.+....      +..++++++..++.++++||+|||+++++|++++|+.||++|+++++|++++++++
T Consensus       266 ~~~~~~~~d~L~~~~~~~------~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~  339 (497)
T KOG0157|consen  266 SGEEKKRLDFLDTLLLEE------DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR  339 (497)
T ss_pred             CcccchhhhHHHHHHHhc------cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC
Confidence                23567777533221      15699999999999999999999999999999999999999999999999999853


Q ss_pred             CC-CChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCc-CceeeCCCCEEEEeeeecccCCCCCC-CCCCCCCCc
Q 037990          326 KK-LEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNM-QGYYIPKETQILVNVWAIGRDPKTWK-DPLLFKPER  402 (492)
Q Consensus       326 ~~-~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~p~R  402 (492)
                      .. ....+.++|+||++||+|||||+|++|+ +.|.+.+|+++ +||.||||+.|+++++++|||+++|+ ||++|||||
T Consensus       340 ~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeR  418 (497)
T KOG0157|consen  340 DDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPER  418 (497)
T ss_pred             CCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccc
Confidence            22 2333333699999999999999999999 57999999999 48999999999999999999999996 999999999


Q ss_pred             ccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCe
Q 037990          403 FLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPL  482 (492)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  482 (492)
                      |+++...     ...++++|+|||+|+|.|+|++||++|+|+++++|+++|+|++..+..     ......++.++..++
T Consensus       419 f~~~~~~-----~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl  488 (497)
T KOG0157|consen  419 FLDGEEK-----AKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGL  488 (497)
T ss_pred             cCCCCCc-----CCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCe
Confidence            9975432     134568999999999999999999999999999999999999877732     333568889999999


Q ss_pred             eEeeeccC
Q 037990          483 KAIPIPYR  490 (492)
Q Consensus       483 ~~~~~~r~  490 (492)
                      +|++++|.
T Consensus       489 ~v~~~~r~  496 (497)
T KOG0157|consen  489 KVKLRPRG  496 (497)
T ss_pred             EEEEEeCC
Confidence            99999985


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-73  Score=515.73  Aligned_cols=453  Identities=24%  Similarity=0.357  Sum_probs=378.0

Q ss_pred             cccCCCCCCCCCCcccccccccCC-CCCCCcHHHHHHHHhcCCcEEEe-cCCeeEEEecCHHHHHHHHHhCCcccccCc-
Q 037990           13 LERQRLPPGPRWWPVVGNIFQLGW-MPMPPHASFAILAHKHGPLMTLW-LGSMCTVVVSSNEVARDMFKNHDVVLAGRK-   89 (492)
Q Consensus        13 ~~~~~~pPgP~~~p~~G~~~~~~~-~~~~~~~~~~~~~~kyG~v~~i~-~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-   89 (492)
                      .++...+|||+++|++|.+..+++ ...+.|+.....+++|||||+.. +|+...|.|.||++++.+|+.++. ++.++ 
T Consensus        46 ~r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~  124 (519)
T KOG0159|consen   46 ARPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPL  124 (519)
T ss_pred             cCChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccc
Confidence            334567899999999999884421 12278999999999999999999 888999999999999999998763 34453 


Q ss_pred             c---ccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc----CCCceehHHH
Q 037990           90 I---YEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE----ACAPIDVGRF  162 (492)
Q Consensus        90 ~---~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~----~g~~vd~~~~  162 (492)
                      .   +......++ +...++..+|+.|.+.|..+++.++.++.++.+.+.+.+.+++++..++...    ...+.|+.+.
T Consensus       125 ~~~~w~~~rd~~~-~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~  203 (519)
T KOG0159|consen  125 LIEPWVAYRDFRG-GVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE  203 (519)
T ss_pred             ccchhhhhHHhhc-cCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence            1   112233333 3445677789999999999999999999999999999999999999998764    3367899999


Q ss_pred             HHHHHHHHHHHHhhccccCCCCc---hhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHH
Q 037990          163 IFLMAFNLIGNLMFSKDLLGPES---ERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGG  239 (492)
Q Consensus       163 ~~~~~~~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~  239 (492)
                      +.+++++.||.++||.+++++..   +....+.+++..++.....   ..+.|-++.+..+..+++..++...+.++...
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~  280 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDK  280 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998765   4556677777777665543   23344443333666788899999999999999


Q ss_pred             HHHHHHhhhhh------ccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHH
Q 037990          240 FIKERMEDNEE------KKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKK  313 (492)
Q Consensus       240 ~i~~r~~~~~~------~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~  313 (492)
                      .|++..++-+.      +..+.+-.++..        ..++.+++..+++++++||.|||++|+.|+||+|++||++|++
T Consensus       281 ~Id~~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~  352 (519)
T KOG0159|consen  281 YIDNALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQR  352 (519)
T ss_pred             HHHHHHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHH
Confidence            99988776211      112233333332        3478999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCC-CCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCC
Q 037990          314 VQDELRSVVSP-NKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTW  392 (492)
Q Consensus       314 l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~  392 (492)
                      |++|+.++.++ +..++.+++.+||||.|||+||+||||.+++ ..|...+|.+++||.|||||.|.++++.+.+||++|
T Consensus       353 L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F  431 (519)
T KOG0159|consen  353 LREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF  431 (519)
T ss_pred             HHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhC
Confidence            99999999987 6889999999999999999999999999999 579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCccccccccc
Q 037990          393 KDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERM  472 (492)
Q Consensus       393 ~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~  472 (492)
                      ++|.+|+||||++++.      .+.+++.++|||.|+|+|+|+++|.+|+-+++++++++|+++..++.     ++....
T Consensus       432 ~~p~~F~PeRWL~~~~------~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~  500 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST------KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVY  500 (519)
T ss_pred             CCccccChhhhccccc------CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----Ccccee
Confidence            9999999999999863      24577899999999999999999999999999999999999997752     333346


Q ss_pred             ceeeccCCCeeEeeeccC
Q 037990          473 GITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       473 ~~~~~~~~~~~~~~~~r~  490 (492)
                      .++..|..++.+++++|.
T Consensus       501 ~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  501 RFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             EEEEcCCCCcceeeeeCC
Confidence            777888999999999885


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3e-74  Score=566.81  Aligned_cols=429  Identities=32%  Similarity=0.573  Sum_probs=356.7

Q ss_pred             CCCCCCCcccccccccC--CCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccccccc
Q 037990           19 PPGPRWWPVVGNIFQLG--WMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMKG   96 (492)
Q Consensus        19 pPgP~~~p~~G~~~~~~--~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~~   96 (492)
                      ||||+++|++||+..+.  +   +++.++.+++++||++|+++++++++++|+||+.+++|+.++...++.++.......
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~---~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKG---NPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEI   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTH---HHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCC---cHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccc
Confidence            89999999999999985  4   789999999999999999999999999999999999999988766665533222221


Q ss_pred             --ccCCCceEEeccCChhHHHHHHhhhhcccchh-hHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHH
Q 037990           97 --DYGTEGSIITSQYGAHWRMLRRLCTTEFFVTS-RLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIG  172 (492)
Q Consensus        97 --~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~  172 (492)
                        ....+. .++..+++.|+.+|+++. +.|+.. .+ .+.+.+.+.++.+++.+.+.. .++.+|+.+++..+++|+++
T Consensus        78 ~~~~~~~~-~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~  154 (463)
T PF00067_consen   78 FRGPFGGK-GLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIG  154 (463)
T ss_dssp             HHHHHTTT-SSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHH
T ss_pred             cccccccc-cccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccc
Confidence              011123 345566899999999998 566666 66 899999999999999999875 33479999999999999999


Q ss_pred             HHhhccccCCCCchhHHHHHHHHHHHHHhhCCc--cccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 037990          173 NLMFSKDLLGPESERGAKFSYHAGKVMELAGKP--NVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEE  250 (492)
Q Consensus       173 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  250 (492)
                      .++||.+++..+++....+.+.+..+.......  .+...+|++.++ +....+....+.+.+.+++.+.+++++++...
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  155 RVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             cccccceeeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence            999999988666554456666666665543221  234556655555 34455666667788889999999998876222


Q ss_pred             ---ccccHHHHHHhhc-cCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCC
Q 037990          251 ---KKKDFLDVLLAFH-GDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNK  326 (492)
Q Consensus       251 ---~~~d~l~~ll~~~-~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  326 (492)
                         ...|+++.++... ...  .+..++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++++.+++.
T Consensus       234 ~~~~~~d~l~~ll~~~~~~~--~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  234 GDESRRDLLDSLLQASSDSD--GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             SSSSCSSHHHHHHHHHHTTT--TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               5789999999986 221  1247999999999999999999999999999999999999999999999999997777


Q ss_pred             CCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCC
Q 037990          327 KLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEP  406 (492)
Q Consensus       327 ~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  406 (492)
                      .++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|+++++++|+||++|+||++|+|+||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999996688999999999999999999999999999999999999999999999998


Q ss_pred             CCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCC
Q 037990          407 TNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGL  461 (492)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~  461 (492)
                      +..     ....+..++|||.|+|.|+|++||++|+++++++|+++|+|++.++.
T Consensus       392 ~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~  441 (463)
T PF00067_consen  392 RGI-----SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS  441 (463)
T ss_dssp             TST-----BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS
T ss_pred             ccc-----cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC
Confidence            641     12355689999999999999999999999999999999999997664


No 20 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.3e-72  Score=551.11  Aligned_cols=420  Identities=20%  Similarity=0.281  Sum_probs=325.9

Q ss_pred             ccCCCCCCCCCCcccccccccC-C-CCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccc
Q 037990           14 ERQRLPPGPRWWPVVGNIFQLG-W-MPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIY   91 (492)
Q Consensus        14 ~~~~~pPgP~~~p~~G~~~~~~-~-~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~   91 (492)
                      ++.++||||+++|++||++.+. . ...+++.++.+++++||++|++++|++++|+|+||+++++++.++...|..+...
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            3458999999999999986542 1 0015678899999999999999999999999999999999999876656433211


Q ss_pred             cccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhh-cHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 037990           92 EAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDA-TRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNL  170 (492)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~v  170 (492)
                      . .....  +...++..+|+.|+++|+++. +.|++..++. +.+.+.+.+..+++.+.   .++.+|+.+.+..+++|+
T Consensus       115 ~-~~~~~--g~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        115 S-IGGIL--GKWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK---ENSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             H-HHHHh--CcccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC---CCCCEEehHHHHHHHHHH
Confidence            1 11112  222344557999999999998 7889888876 56777777777777664   456799999999999999


Q ss_pred             HHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh-h-
Q 037990          171 IGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED-N-  248 (492)
Q Consensus       171 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-~-  248 (492)
                      |++++||.+.+..   ....+...+.........  ....+|..       ..++.....+.+.+++.+++++++++ . 
T Consensus       188 i~~~~fg~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  255 (490)
T PLN02500        188 MAKHIMSMDPGEE---ETEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLKE  255 (490)
T ss_pred             HHHHHhCCCCCch---HHHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999975431   112222222222221100  00111211       12334456678888888888887653 1 


Q ss_pred             h---hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcC--
Q 037990          249 E---EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVS--  323 (492)
Q Consensus       249 ~---~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~--  323 (492)
                      +   ....|+++.+++.        ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++  
T Consensus       256 ~~~~~~~~d~l~~ll~~--------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~  327 (490)
T PLN02500        256 EDESVEEDDLLGWVLKH--------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAK  327 (490)
T ss_pred             ccCCCCcchHHHHHHhc--------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc
Confidence            1   1346899999873        24899999999999999999999999999999999999999999999999863  


Q ss_pred             ---CCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCC
Q 037990          324 ---PNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKP  400 (492)
Q Consensus       324 ---~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  400 (492)
                         ++..++++|+++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++++++||||++|+||++|||
T Consensus       328 ~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~P  406 (490)
T PLN02500        328 KQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNP  406 (490)
T ss_pred             ccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccCh
Confidence               23468999999999999999999999999998 57999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCcccc-cccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCC
Q 037990          401 ERFLEPTNYNMMV-EYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGL  461 (492)
Q Consensus       401 ~R~~~~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~  461 (492)
                      |||+++++..... .....+..++|||.|+|.|+|++||++|+++++++|+++|+|++.++.
T Consensus       407 eRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~  468 (490)
T PLN02500        407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD  468 (490)
T ss_pred             hhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC
Confidence            9999754221000 001134579999999999999999999999999999999999987663


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=4.3e-72  Score=544.73  Aligned_cols=429  Identities=21%  Similarity=0.240  Sum_probs=337.9

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMK   95 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~   95 (492)
                      ++.||||+++|++||+..+.+   ++..++.+++++||++|++++|++++++++||+.+++++.++...+..........
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFLK---QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHHH---hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            478999999999999988866   67889999999999999999999999999999999999987665553322111111


Q ss_pred             cccCCCceEEeccCChhHHHHHHhhhhcccchhhHhh-cHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHH
Q 037990           96 GDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDA-TRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGNL  174 (492)
Q Consensus        96 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~~  174 (492)
                       ..  +.+.+++.+|+.|+.+|+++. +.|++..++. +.+.+.+.++++++.|.   .++++|+.+.+..+++++++.+
T Consensus       107 -~l--g~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~  179 (463)
T PLN02774        107 -IL--GTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD---GLKTIDIQEKTKEMALLSALKQ  179 (463)
T ss_pred             -Hh--CccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC---CCCCEEeeHHHHHHHHHHHHHH
Confidence             22  223345568999999999997 7899988875 68888888888887774   3467999999999999999999


Q ss_pred             hhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 037990          175 MFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEEKKKD  254 (492)
Q Consensus       175 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~d  254 (492)
                      +||......    ...+...+...   ....   ..+|.  ++ +....++..++.+.+.+++.+.|++++++ .....|
T Consensus       180 ~~g~~~~~~----~~~~~~~~~~~---~~~~---~~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-~~~~~d  245 (463)
T PLN02774        180 IAGTLSKPI----SEEFKTEFFKL---VLGT---LSLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRAS-GETHTD  245 (463)
T ss_pred             HcCCCChHH----HHHHHHHHHHH---hccc---ccCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence            999864321    12222222211   1110   01111  11 11112344556788888888899887654 234579


Q ss_pred             HHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC---CCCCChh
Q 037990          255 FLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP---NKKLEEE  331 (492)
Q Consensus       255 ~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~~~~~~~  331 (492)
                      +++.+++...    ++..++++++..++.++++||+|||+++++|++++|++||++|+++++|++++++.   +..++++
T Consensus       246 ~l~~ll~~~~----~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~  321 (463)
T PLN02774        246 MLGYLMRKEG----NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWN  321 (463)
T ss_pred             HHHHHHhCcc----CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHH
Confidence            9999997432    22358999999999999999999999999999999999999999999999999863   3568999


Q ss_pred             hhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCCcc
Q 037990          332 DIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNYNM  411 (492)
Q Consensus       332 ~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~  411 (492)
                      ++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||++.+..  
T Consensus       322 ~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--  398 (463)
T PLN02774        322 DYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--  398 (463)
T ss_pred             HHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--
Confidence            999999999999999999999987 56999999999999999999999999999999999999999999999965321  


Q ss_pred             cccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeec
Q 037990          412 MVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIP  488 (492)
Q Consensus       412 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (492)
                            ....++|||+|+|.|+|++||.+|++++++.|+++|++++.++...  ..   .  .+..++.++.+++++
T Consensus       399 ------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~---~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 ------SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MK---F--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             ------CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--cc---C--CCCCCCCCceEEeee
Confidence                  1236899999999999999999999999999999999999766321  11   1  122356778877764


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.9e-71  Score=545.88  Aligned_cols=429  Identities=22%  Similarity=0.345  Sum_probs=329.7

Q ss_pred             CCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccccccccCCCceEEeccCChhHHHHHHh
Q 037990           40 PPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAMKGDYGTEGSIITSQYGAHWRMLRRL  119 (492)
Q Consensus        40 ~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~  119 (492)
                      +.+..+.+|+++|||||++++|+.++++|+||+.+++||.++...+.............  +.+ +++.+|+.|+.+|+.
T Consensus       152 ~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~-l~~~dge~wr~rRr~  228 (633)
T PLN02738        152 AFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKG-LIPADGEIWRVRRRA  228 (633)
T ss_pred             hHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCc-eecCCcHHHHHHHHh
Confidence            57789999999999999999999899999999999999997766566543322211111  333 456789999999999


Q ss_pred             hhhcccchhhHhhcHHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHHHHhhccccCCCCchh--HHHHHHHHH
Q 037990          120 CTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIGNLMFSKDLLGPESER--GAKFSYHAG  196 (492)
Q Consensus       120 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~--~~~~~~~~~  196 (492)
                      ++ ++|+...++.+.+.+.+.++.+++.+.+.. .|+++|+.+.+..+++|+|+.++||.+++...++.  ...+...+.
T Consensus       229 l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~  307 (633)
T PLN02738        229 IV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLR  307 (633)
T ss_pred             cc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHH
Confidence            98 899999999999999999999999998754 67899999999999999999999999987543321  122222222


Q ss_pred             HHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhh---h---------hhccccHHHHHHhhcc
Q 037990          197 KVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMED---N---------EEKKKDFLDVLLAFHG  264 (492)
Q Consensus       197 ~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~---------~~~~~d~l~~ll~~~~  264 (492)
                      ..............+|++..+ .. ..++.....+.+.++..++++.+++.   .         .....|+++.|++.. 
T Consensus       308 ~~~~~~~~~~~~~~~p~~~~l-~~-~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~-  384 (633)
T PLN02738        308 EAEDRSVSPIPVWEIPIWKDI-SP-RQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG-  384 (633)
T ss_pred             HHHHHhhcchhhhhhhHHhhh-ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC-
Confidence            221111111111222322222 11 11223334445555555555433221   0         113458999998743 


Q ss_pred             CCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCCChhhhcCCccHHHHHH
Q 037990          265 DGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKLEEEDIEQLPYLKAVIK  344 (492)
Q Consensus       265 ~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~  344 (492)
                            ..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++++++ +..++++++++||||+|||+
T Consensus       385 ------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIk  457 (633)
T PLN02738        385 ------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVIN  457 (633)
T ss_pred             ------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHH
Confidence                  34899999999999999999999999999999999999999999999999998 46789999999999999999


Q ss_pred             HHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCCcccccccCccceeec
Q 037990          345 ETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNYNMMVEYKGHHFEFIP  424 (492)
Q Consensus       345 E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~  424 (492)
                      |+|||+|+++.+ +|.+.+|++++||.||+||.|+++++.+||||++||||++|+||||+......   ........++|
T Consensus       458 EtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~---~~~~~~~~~vp  533 (633)
T PLN02738        458 ESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP---NETNQNFSYLP  533 (633)
T ss_pred             HHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc---cccCCCCceeC
Confidence            999999999994 58889999999999999999999999999999999999999999998532110   01224458999


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeeccC
Q 037990          425 FGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       425 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (492)
                      ||.|+|.|+|++||++|+++++++|+++|+|++.++..  +..  ...+.+..+..++.+++++|.
T Consensus       534 FG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~~--~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        534 FGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PVK--MTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Ccc--cccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999999999999999876632  222  223556666778888888875


No 23 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.8e-71  Score=539.27  Aligned_cols=434  Identities=21%  Similarity=0.281  Sum_probs=339.7

Q ss_pred             cccCCCCCCCCCCcccccccccCC--CCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcc
Q 037990           13 LERQRLPPGPRWWPVVGNIFQLGW--MPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKI   90 (492)
Q Consensus        13 ~~~~~~pPgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~   90 (492)
                      ++++++||||.++|++||++.+..  ...+++.++.+|+++||+||++++|++++||++||++++++|.++...+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            456789999999999999988721  011688999999999999999999999999999999999999987766654422


Q ss_pred             ccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhh-cHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHH
Q 037990           91 YEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDA-TRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFN  169 (492)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~  169 (492)
                       ......+  +.+.++..+|+.|+++|+++. +.|+...+.. ..+.+.+.++++++.+.   .++.+|+.+.+..++++
T Consensus        83 -~~~~~l~--g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         83 -KSLTELM--GKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR---DDPPVLVQDETKKIAFE  155 (452)
T ss_pred             -hhHHHHh--CcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc---CCCCEEhHHHHHHHHHH
Confidence             1122222  223456668999999999998 6777666655 35566666666665553   45789999999999999


Q ss_pred             HHHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 037990          170 LIGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNE  249 (492)
Q Consensus       170 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  249 (492)
                      +++.++||.+...    ....+...+..+.....      .+|.  ++ +.....+...+.+.+.+++.++|+++++...
T Consensus       156 vi~~~~~G~~~~~----~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        156 VLVKALISLEPGE----EMEFLKKEFQEFIKGLM------SLPI--KL-PGTRLYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHHcCCCchH----HHHHHHHHHHHHhhhHH------hCcc--CC-CchHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999976532    11223233322222111      1121  11 1111123445678889999999988875421


Q ss_pred             h-------ccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhc
Q 037990          250 E-------KKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVV  322 (492)
Q Consensus       250 ~-------~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~  322 (492)
                      .       ...|+++.+++..      +..++++++..+++++++||+|||+++++|++++|++||++|+++++|+++++
T Consensus       223 ~~~~~~~~~~~d~l~~ll~~~------~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        223 NKEEDETGIPKDVVDVLLRDG------SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             ccCccccCChhhHHHHHHhcC------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            1       1468999998753      23589999999999999999999999999999999999999999999999876


Q ss_pred             C----CCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCC
Q 037990          323 S----PNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLF  398 (492)
Q Consensus       323 ~----~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  398 (492)
                      +    .+..++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|+++++++|+||++|+||++|
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F  375 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQF  375 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCcccc
Confidence            3    24568999999999999999999999999986 679999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeecc
Q 037990          399 KPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRK  478 (492)
Q Consensus       399 ~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (492)
                      +||||++++.         .+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++.   ..     ...+..+
T Consensus       376 ~PeRfl~~~~---------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~~  438 (452)
T PLN03141        376 NPWRWQEKDM---------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVRM  438 (452)
T ss_pred             CcccccCCCC---------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccccC
Confidence            9999997531         24579999999999999999999999999999999999976552   11     1246677


Q ss_pred             CCCeeEeeeccC
Q 037990          479 SVPLKAIPIPYR  490 (492)
Q Consensus       479 ~~~~~~~~~~r~  490 (492)
                      ..++.|++.+|.
T Consensus       439 ~~~~~~~~~~~~  450 (452)
T PLN03141        439 KRKLPIWVTRID  450 (452)
T ss_pred             CCCceEEEEeCC
Confidence            788999998885


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.9e-71  Score=546.90  Aligned_cols=449  Identities=20%  Similarity=0.290  Sum_probs=338.5

Q ss_pred             CCCCCCCcccccccccCCCCCCCcHHHHHHHHhc---CCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccccc-
Q 037990           19 PPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKH---GPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEAM-   94 (492)
Q Consensus        19 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~-   94 (492)
                      +|||+++|++||++.+..   + +..+.+|.++|   |++|++++|+.++++++||+.+++|+.++...+.....+... 
T Consensus        32 ~pgp~~~p~~G~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK---N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             cCCCCCCCeecchHHHHh---c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            689999999999876543   2 34567777777   899999999999999999999999998764445444322111 


Q ss_pred             ccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHH-HHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHHHH
Q 037990           95 KGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVR-SKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNLIG  172 (492)
Q Consensus        95 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~vi~  172 (492)
                      ....  +.+ +++.+|+.|+++||+++ +.|+...++.+.+.+ .+.++.+++.+.+.. .++.+|+.+++..+++|+|+
T Consensus       108 ~~~~--g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        108 EVLL--GDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHh--cCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            1111  333 56678999999999998 789999999998876 666778888776532 56789999999999999999


Q ss_pred             HHhhccccCCCCchh-HHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhh-h-
Q 037990          173 NLMFSKDLLGPESER-GAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDN-E-  249 (492)
Q Consensus       173 ~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~-  249 (492)
                      .++||.+++..+.+. ...+...++........ .....++.+.++......+...+..+.+.+++.+.+++++++. . 
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999987644221 12333333332221100 0000011111111111123334566777888888888776531 1 


Q ss_pred             -----hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC
Q 037990          250 -----EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP  324 (492)
Q Consensus       250 -----~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~  324 (492)
                           ....|+++.+++...+   ++..++++++.++++++++||+|||+++++|++|+|++||++|+|+++|+++++++
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~---~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~  339 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGED---PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKE  339 (516)
T ss_pred             ccccccccccHHHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc
Confidence                 1356899999975432   23469999999999999999999999999999999999999999999999988642


Q ss_pred             --------------------CCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCC-cCceeeCCCCEEEEeee
Q 037990          325 --------------------NKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCN-MQGYYIPKETQILVNVW  383 (492)
Q Consensus       325 --------------------~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~-i~g~~ip~g~~v~~~~~  383 (492)
                                          ++.++++++++||||+|||+|+||++|+++.. +|.+.+|.. ++|+.||||+.|+++++
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~  418 (516)
T PLN03195        340 RAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPY  418 (516)
T ss_pred             ccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehH
Confidence                                24589999999999999999999999999996 455666555 49999999999999999


Q ss_pred             ecccCCCCC-CCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCC
Q 037990          384 AIGRDPKTW-KDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLK  462 (492)
Q Consensus       384 ~~~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~  462 (492)
                      ++||||++| +||++|+||||++++..     ....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++. 
T Consensus       419 ~~h~dp~~~g~dP~~F~PeRwl~~~~~-----~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-  492 (516)
T PLN03195        419 SMGRMEYNWGPDAASFKPERWIKDGVF-----QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-  492 (516)
T ss_pred             hhccChhhhccChhhcCCcccCCCCCc-----CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-
Confidence            999999999 99999999999964321     01234579999999999999999999999999999999999986552 


Q ss_pred             CcccccccccceeeccCCCeeEeeeccC
Q 037990          463 PEEMDMTERMGITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (492)
                        +..  .....+..+..++.|++++|.
T Consensus       493 --~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        493 --PVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             --cce--eeeeeEEecCCCEEEEEEeCC
Confidence              222  223455667788999998873


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7.9e-71  Score=535.38  Aligned_cols=428  Identities=22%  Similarity=0.313  Sum_probs=341.6

Q ss_pred             ccccCCCCCCCCCCccccccccc-CCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcc
Q 037990           12 ELERQRLPPGPRWWPVVGNIFQL-GWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKI   90 (492)
Q Consensus        12 ~~~~~~~pPgP~~~p~~G~~~~~-~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~   90 (492)
                      ..++.+.||||+++|++||++.+ .+   +++.++.+++++||++|+++++++++|+|+||+.+++++.++...+.  +.
T Consensus        30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~---~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~  104 (463)
T PLN02196         30 SSTKLPLPPGTMGWPYVGETFQLYSQ---DPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PT  104 (463)
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHhc---CHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--cc
Confidence            33456899999999999998875 45   78999999999999999999999999999999999999987765553  22


Q ss_pred             ccccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 037990           91 YEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNL  170 (492)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~v  170 (492)
                      ......... +...++..+|+.|+++|+++. +.|+++.++.+.+.+.+.++++++.|.    ++.+|+.+++..+++++
T Consensus       105 ~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~v~~~~~~~~~~~~v  178 (463)
T PLN02196        105 FPASKERML-GKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----GTQINTYQEMKTYTFNV  178 (463)
T ss_pred             CchHHHHHc-CcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----CCeEEeHHHHHHHHHHH
Confidence            111111111 333456678999999999998 789999999999999999999988773    45799999999999999


Q ss_pred             HHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 037990          171 IGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEE  250 (492)
Q Consensus       171 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  250 (492)
                      ++.++||.+....    ...+......+..      ....+|+.  + +....++...+.+.+.+++.+.|++++++ ..
T Consensus       179 ~~~~~fG~~~~~~----~~~~~~~~~~~~~------~~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~-~~  244 (463)
T PLN02196        179 ALLSIFGKDEVLY----REDLKRCYYILEK------GYNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQN-GS  244 (463)
T ss_pred             HHHHHcCCCCchH----HHHHHHHHHHHhc------chhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhc-CC
Confidence            9999999875321    1122221111110      01112221  1 11122445567788888888888887654 33


Q ss_pred             ccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC---CCC
Q 037990          251 KKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP---NKK  327 (492)
Q Consensus       251 ~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~~~  327 (492)
                      ...|+++.+++.       +..++++++..+++++++||+|||+++++|++++|++||++|+++++|++++.+.   ++.
T Consensus       245 ~~~d~l~~ll~~-------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02196        245 SHNDLLGSFMGD-------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGES  317 (463)
T ss_pred             CcccHHHHHHhc-------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCC
Confidence            457899999852       2358999999999999999999999999999999999999999999999998863   467


Q ss_pred             CChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCC
Q 037990          328 LEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPT  407 (492)
Q Consensus       328 ~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~  407 (492)
                      ++++++++||||+|||+|+||++|++++. .|.+.+|++++||.||||+.|+++++++|+||++|+||++|+||||++..
T Consensus       318 ~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~  396 (463)
T PLN02196        318 LTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP  396 (463)
T ss_pred             CCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC
Confidence            89999999999999999999999999995 59999999999999999999999999999999999999999999999632


Q ss_pred             CCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeee
Q 037990          408 NYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPI  487 (492)
Q Consensus       408 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (492)
                                .+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++..    .+.  ...+..|+.++.++++
T Consensus       397 ----------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~----~~~--~~~~~~p~~~~~~~~~  460 (463)
T PLN02196        397 ----------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN----GIQ--YGPFALPQNGLPIALS  460 (463)
T ss_pred             ----------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC----ceE--EcccccCCCCceEEEe
Confidence                      234789999999999999999999999999999999999866521    222  2323446677777776


Q ss_pred             c
Q 037990          488 P  488 (492)
Q Consensus       488 ~  488 (492)
                      .
T Consensus       461 ~  461 (463)
T PLN02196        461 R  461 (463)
T ss_pred             c
Confidence            4


No 26 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.5e-69  Score=526.97  Aligned_cols=445  Identities=24%  Similarity=0.326  Sum_probs=348.0

Q ss_pred             CCCCCCCCccccccccc-----CCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccc
Q 037990           18 LPPGPRWWPVVGNIFQL-----GWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYE   92 (492)
Q Consensus        18 ~pPgP~~~p~~G~~~~~-----~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~   92 (492)
                      +=-|-.|||++|..+.+     +.   .++.++.+|+++||++|++++|+.++++++|||++++|+++....|..+....
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~   89 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGG---ALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE   89 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhcc---HHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh
Confidence            34577899999998877     34   68899999999999999999999999999999999999987666666554332


Q ss_pred             ccccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHH-HHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHHH
Q 037990           93 AMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRG-VRSKCIDRMVQFVEEAE-ACAPIDVGRFIFLMAFNL  170 (492)
Q Consensus        93 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~-~g~~vd~~~~~~~~~~~v  170 (492)
                      ......  +.+ ++..+|+.|+++|++++ +.|+...+..+.+ .+.++++.+++.+.+.. +|+++|+.+++..+++|+
T Consensus        90 ~~~~~~--~~~-i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         90 VSEFLF--GSG-FAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             hhHHHh--cCc-cccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence            212112  233 45567999999999998 7888888887654 78888999999998764 567899999999999999


Q ss_pred             HHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhh-----hhcCcchhhhhhHHHHHHHHHHHHHHHHHHH
Q 037990          171 IGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPIL-----RWLDPQGIRKKTQFHVERAFEIAGGFIKERM  245 (492)
Q Consensus       171 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~  245 (492)
                      |+.++||.+++....+  ..+...+......... ....++|++     .++ .+ ..++..++.+.+.+++.+++++++
T Consensus       166 i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~-~p-~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        166 IGLSVFNYNFDSLTTD--SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI-SP-RQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHHHHcCCCccccccC--cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc-Ch-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999864332  2233333332221111 111223322     111 11 233455667777888888887765


Q ss_pred             hhh---h----------hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHH
Q 037990          246 EDN---E----------EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLK  312 (492)
Q Consensus       246 ~~~---~----------~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~  312 (492)
                      +..   .          +...|+++.|++..       ..++.+++..+++++++||+|||+++++|++++|++||++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~  313 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASR-------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALR  313 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhcc-------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHH
Confidence            420   0          12467999998643       238899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCC
Q 037990          313 KVQDELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTW  392 (492)
Q Consensus       313 ~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~  392 (492)
                      ++++|++++++. ..++++++++||||+|||+||||++|+++.+.+|.+.+|+.++||.||+|+.|+++.+++||||++|
T Consensus       314 kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~  392 (489)
T PLN02936        314 KAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW  392 (489)
T ss_pred             HHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhC
Confidence            999999999874 4589999999999999999999999999998877777788889999999999999999999999999


Q ss_pred             CCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCccccccccc
Q 037990          393 KDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERM  472 (492)
Q Consensus       393 ~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~  472 (492)
                      |||++|+||||+.+++..   .....+..++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +...  ..
T Consensus       393 ~dP~~F~PeRwl~~~~~~---~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~  464 (489)
T PLN02936        393 ERAEEFVPERFDLDGPVP---NETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TT  464 (489)
T ss_pred             CCccccCccccCCCCCCc---cccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ec
Confidence            999999999999653210   011223579999999999999999999999999999999999987653   2221  23


Q ss_pred             ceeeccCCCeeEeeeccC
Q 037990          473 GITLRKSVPLKAIPIPYR  490 (492)
Q Consensus       473 ~~~~~~~~~~~~~~~~r~  490 (492)
                      +++..++.++.|++++|.
T Consensus       465 ~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        465 GATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             ceEEeeCCCeEEEEEeee
Confidence            455666778888888875


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.5e-69  Score=532.24  Aligned_cols=438  Identities=21%  Similarity=0.276  Sum_probs=340.3

Q ss_pred             ccCCCCCCCCCCcccccccccCC--CCCCCcHHHHHHHHhcCC--cEEEecCCeeEEEecCHHHHHHHHHhCCcccccCc
Q 037990           14 ERQRLPPGPRWWPVVGNIFQLGW--MPMPPHASFAILAHKHGP--LMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRK   89 (492)
Q Consensus        14 ~~~~~pPgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~--v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~   89 (492)
                      ++.++||||+++|++|++..+..  ...+++.++.+++++||+  +|++++++.++++++||+.+++|+.++. .|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            34578999999999999887621  011688899999999997  7999999999999999999999998763 344332


Q ss_pred             cccccccccCCCceEEeccCChhHHHHHHhhhhccc-chhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHH
Q 037990           90 IYEAMKGDYGTEGSIITSQYGAHWRMLRRLCTTEFF-VTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAF  168 (492)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~  168 (492)
                      ...... ..  +.+.++..+|+.|+++|+++. +.| +++.++.+.+.+.+.++++++.+..   ++.+|+.+++..+++
T Consensus       118 ~~~~~~-~~--g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~---~~~v~~~~~~~~~~~  190 (490)
T PLN02302        118 PESTVE-LI--GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK---MGEIEFLTELRKLTF  190 (490)
T ss_pred             chhHHH-Hh--ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC---CCCEehHHHHHHHHH
Confidence            211112 11  233345567999999999998 555 5788999999999999999998853   346999999999999


Q ss_pred             HHHHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 037990          169 NLIGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDN  248 (492)
Q Consensus       169 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  248 (492)
                      ++++.++||.++...    ...+.............  ....+|..       ...+..++.+.+.+++.+.|+++++..
T Consensus       191 ~vi~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~  257 (490)
T PLN02302        191 KIIMYIFLSSESELV----MEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERRNSR  257 (490)
T ss_pred             HHHHHHHcCCCChHH----HHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999876421    12222222111111100  00011111       112334456778888888888876542


Q ss_pred             h----hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCC
Q 037990          249 E----EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSP  324 (492)
Q Consensus       249 ~----~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~  324 (492)
                      .    ....|+++.|++..++   ++..++++++..+++.+++||+|||+++++|++++|++||++|+|+++|+++++++
T Consensus       258 ~~~~~~~~~d~l~~ll~~~~~---~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~  334 (490)
T PLN02302        258 KQNISPRKKDMLDLLLDAEDE---NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKK  334 (490)
T ss_pred             hccCCCCcCCHHHHHHhhhcc---CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence            1    2457999999986543   23468999999999999999999999999999999999999999999999999864


Q ss_pred             C----CCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCC
Q 037990          325 N----KKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKP  400 (492)
Q Consensus       325 ~----~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  400 (492)
                      .    ..++++++++||||+|||+|+||++|+++. .+|.+.+|++++||.||+|+.|+++.+++||||++|+||++|+|
T Consensus       335 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  413 (490)
T PLN02302        335 RPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP  413 (490)
T ss_pred             CCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccCh
Confidence            2    237999999999999999999999999998 46999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCC
Q 037990          401 ERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSV  480 (492)
Q Consensus       401 ~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  480 (492)
                      |||++...         .+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.    ..+.  ......|..
T Consensus       414 eR~~~~~~---------~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~  478 (490)
T PLN02302        414 SRWDNYTP---------KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPRPKD  478 (490)
T ss_pred             hhcCCCCC---------CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCCCCC
Confidence            99996421         23478999999999999999999999999999999999986542    1211  122355667


Q ss_pred             CeeEeeeccCC
Q 037990          481 PLKAIPIPYRG  491 (492)
Q Consensus       481 ~~~~~~~~r~~  491 (492)
                      ++.+++++|..
T Consensus       479 ~~~~~~~~~~~  489 (490)
T PLN02302        479 NCLARITKVAS  489 (490)
T ss_pred             CceEEEEeccC
Confidence            88888887753


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.5e-69  Score=476.03  Aligned_cols=447  Identities=21%  Similarity=0.273  Sum_probs=356.3

Q ss_pred             CCCCCCCC-CcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccc-cc
Q 037990           17 RLPPGPRW-WPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYE-AM   94 (492)
Q Consensus        17 ~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~-~~   94 (492)
                      +.||.-++ +|++|+.+.|++   +|..+++++++|||+||++.++|+.+.++.+|+....++......++....+. ..
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk---~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK---DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc---CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            68888875 699999999999   99999999999999999999999999999999999999987744444333332 22


Q ss_pred             ccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHH-HHHhcCCCceehHHHHHHHHHHHHHH
Q 037990           95 KGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQF-VEEAEACAPIDVGRFIFLMAFNLIGN  173 (492)
Q Consensus        95 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~g~~vd~~~~~~~~~~~vi~~  173 (492)
                      ...+  |.+.+...++....++.+++. ..+....++.+.+.|.+++.+.+.. +.+  +|....+...+....+.+--.
T Consensus       108 ~~vF--g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~--s~~~d~l~~~~~~ii~tAs~~  182 (486)
T KOG0684|consen  108 TPVF--GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE--SGETDGLYTFCRLIIFTASRL  182 (486)
T ss_pred             hhhc--CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc--ccchhHhhhhhHHHhhhhHHH
Confidence            3333  455666677788888888887 6778888999999998888887777 443  566666777777777777666


Q ss_pred             HhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 037990          174 LMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEEKKK  253 (492)
Q Consensus       174 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~  253 (492)
                      ++||+.....+++    ....+.+......  .+-..+|.  +++.+. .++..++.+.+.+.+...|.+|++..+....
T Consensus       183 ll~~e~r~~~d~~----~a~l~~dLd~~F~--~~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~  253 (486)
T KOG0684|consen  183 LLGGEVRDQLDAD----VAKLYHDLDQGFQ--PFDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISKWDN  253 (486)
T ss_pred             hhhhhhhhhhcch----HHHHHHHHhcccc--chHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccccccH
Confidence            6777666554332    2222333222111  12233442  332232 3444477889999999999999887555667


Q ss_pred             cHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCC-CChhh
Q 037990          254 DFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKK-LEEED  332 (492)
Q Consensus       254 d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~-~~~~~  332 (492)
                      |+++.+++..+    ++.+.+++|+...++.+++||+.|++.|.+|++++|++|||+++.+++|+++++|.+.. +++++
T Consensus       254 dmlq~l~~~y~----dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~  329 (486)
T KOG0684|consen  254 DMLQSLMEKYK----DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQ  329 (486)
T ss_pred             HHHHHHHHHhh----cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHH
Confidence            99999998333    45789999999999999999999999999999999999999999999999999987654 99999


Q ss_pred             hcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCc----eeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCC
Q 037990          333 IEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQG----YYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTN  408 (492)
Q Consensus       333 ~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~  408 (492)
                      +++||+|++||+|||||+||.+.. -|.+.+|.++.+    |.||+|..|.+++..+|+||++||||+.|+|+||+++++
T Consensus       330 L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~  408 (486)
T KOG0684|consen  330 LKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNG  408 (486)
T ss_pred             HhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCc
Confidence            999999999999999999999885 499999999965    999999999999999999999999999999999998775


Q ss_pred             CcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeec
Q 037990          409 YNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIP  488 (492)
Q Consensus       409 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (492)
                      +... ..+.-++.++|||+|.|.|||++||.+|+|.++..+|+.||+++.++ +.+++++.   ..++.|..++.++.+.
T Consensus       409 ~~~k-~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s---~~v~~P~g~v~irYK~  483 (486)
T KOG0684|consen  409 ESKK-NGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYS---RMVMQPEGDVRIRYKR  483 (486)
T ss_pred             cccc-ccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHH---HhhcCCCCCceEEEee
Confidence            5321 11223346799999999999999999999999999999999999997 44555543   3477789999999988


Q ss_pred             cC
Q 037990          489 YR  490 (492)
Q Consensus       489 r~  490 (492)
                      |+
T Consensus       484 R~  485 (486)
T KOG0684|consen  484 RP  485 (486)
T ss_pred             cC
Confidence            75


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3e-68  Score=515.17  Aligned_cols=432  Identities=23%  Similarity=0.262  Sum_probs=331.7

Q ss_pred             CCCCCCCCCCcccccccccCC--CCCCCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCccccc
Q 037990           16 QRLPPGPRWWPVVGNIFQLGW--MPMPPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYEA   93 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~   93 (492)
                      .++||||.++|++||++.+..  ...+++.++.+++++||++++++++++++++|+||+.+++++.++...|..+.....
T Consensus        29 ~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~  108 (472)
T PLN02987         29 MRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSI  108 (472)
T ss_pred             CCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHH
Confidence            368999999999999987621  011688899999999999999999999999999999999999987766654432211


Q ss_pred             cccccCCCceEEeccCChhHHHHHHhhhhcccchhhHhhcHH-HHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHH
Q 037990           94 MKGDYGTEGSIITSQYGAHWRMLRRLCTTEFFVTSRLDATRG-VRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIG  172 (492)
Q Consensus        94 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~  172 (492)
                      ... .+ +.++ +..+|+.|+++|+++. ++++.+.++.+.. .+.+.++..++.|     ++++++.+.+..+++++++
T Consensus       109 ~~~-lg-~~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~t~~vi~  179 (472)
T PLN02987        109 SNL-LG-KHSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSW-----SSRVLLMEEAKKITFELTV  179 (472)
T ss_pred             HHH-hC-cccc-cccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhh-----ccceehHHHHHHHHHHHHH
Confidence            222 22 2334 4457999999999986 5555455544321 1222223333333     2469999999999999999


Q ss_pred             HHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhh---
Q 037990          173 NLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNE---  249 (492)
Q Consensus       173 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---  249 (492)
                      +++||.+.....    +.+...+.......    ....+|++.     ...++..+..+++.+++.+.|+++++...   
T Consensus       180 ~~~fg~~~~~~~----~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  246 (472)
T PLN02987        180 KQLMSFDPGEWT----ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEEEGA  246 (472)
T ss_pred             HHHcCCCChHHH----HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence            999998753211    22222222221111    111233321     12345666788899999999998876421   


Q ss_pred             hccccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcC---CCC
Q 037990          250 EKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVS---PNK  326 (492)
Q Consensus       250 ~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~---~~~  326 (492)
                      ....|+++.|++..       ..++++++..++.++++||+|||+.+++|++++|++||++|+++++|++++.+   ++.
T Consensus       247 ~~~~d~l~~ll~~~-------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~  319 (472)
T PLN02987        247 EKKKDMLAALLASD-------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSY  319 (472)
T ss_pred             cccccHHHHHHhcC-------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCC
Confidence            23579999999753       24899999999999999999999999999999999999999999999999875   245


Q ss_pred             CCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCC
Q 037990          327 KLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEP  406 (492)
Q Consensus       327 ~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  406 (492)
                      .++++++++|||++||++|+||++|+++. ++|.+.+|++++||.||+|+.|+++++++|+||++|+||++||||||++.
T Consensus       320 ~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  398 (472)
T PLN02987        320 SLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSN  398 (472)
T ss_pred             CCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCC
Confidence            68999999999999999999999999986 57999999999999999999999999999999999999999999999975


Q ss_pred             CCCcccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEee
Q 037990          407 TNYNMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIP  486 (492)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (492)
                      +..      ...+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.   +.    ....+..|..++.+++
T Consensus       399 ~~~------~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~----~~~~~~~p~~~~~~~~  465 (472)
T PLN02987        399 SGT------TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---KL----VFFPTTRTQKRYPINV  465 (472)
T ss_pred             CCC------CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---ce----eecccccCCCCceEEE
Confidence            422      1123578999999999999999999999999999999999987653   11    1234667777889998


Q ss_pred             eccC
Q 037990          487 IPYR  490 (492)
Q Consensus       487 ~~r~  490 (492)
                      ++|.
T Consensus       466 ~~r~  469 (472)
T PLN02987        466 KRRD  469 (472)
T ss_pred             Eecc
Confidence            8875


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3e-66  Score=505.16  Aligned_cols=437  Identities=20%  Similarity=0.253  Sum_probs=336.6

Q ss_pred             CcccccccccCCCCCCCcHHHHHHHHhcC-CcEEEecCCeeEEEecCHHHHHHHHHhCCcccccCcccc-ccccccCCCc
Q 037990           25 WPVVGNIFQLGWMPMPPHASFAILAHKHG-PLMTLWLGSMCTVVVSSNEVARDMFKNHDVVLAGRKIYE-AMKGDYGTEG  102 (492)
Q Consensus        25 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~  102 (492)
                      .++.|++.....   +..+++..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+...+. ......  +.
T Consensus        49 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~--g~  121 (502)
T PLN02426         49 AYLTASWAKDFD---NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL--GR  121 (502)
T ss_pred             CCccHHHHHhcc---cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc--CC
Confidence            456788766444   56777877888887 5778776554  899999999999987655565443322 122222  33


Q ss_pred             eEEeccCChhHHHHHHhhhhcccchhhHhhcH--HHHHHHHHHHHHHHHHhc---CCCceehHHHHHHHHHHHHHHHhhc
Q 037990          103 SIITSQYGAHWRMLRRLCTTEFFVTSRLDATR--GVRSKCIDRMVQFVEEAE---ACAPIDVGRFIFLMAFNLIGNLMFS  177 (492)
Q Consensus       103 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~---~g~~vd~~~~~~~~~~~vi~~~~fG  177 (492)
                      + +++.+|+.|+++||+++ +.|+...++.+.  +.+.+..+.+++.+.+..   .+.++|+.+++..+++|+|+.++||
T Consensus       122 g-i~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        122 G-IFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             c-eeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhC
Confidence            4 56678999999999997 889988888763  677788888888887643   2467999999999999999999999


Q ss_pred             cccCCCCch-hHHHHHHHHHHHHHhhCCccccccchhhh----hcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 037990          178 KDLLGPESE-RGAKFSYHAGKVMELAGKPNVADFLPILR----WLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEEKK  252 (492)
Q Consensus       178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  252 (492)
                      .+++..+.+ ....+...++.+...... ......|+++    ++ +....++..++.+.+.+++.++|+++++.+.+..
T Consensus       200 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~  277 (502)
T PLN02426        200 LDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLL-NIGSERKLKEAIKLVDELAAEVIRQRRKLGFSAS  277 (502)
T ss_pred             CCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence            998765432 123444444443322110 0111123222    22 1122345566788889999999998876533346


Q ss_pred             ccHHHHHHhhccCCCCCCccCchhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCC-CCCChh
Q 037990          253 KDFLDVLLAFHGDGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPN-KKLEEE  331 (492)
Q Consensus       253 ~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~  331 (492)
                      .|+++.++++.         .+++++..++.++++||+|||+++++|++|+|++||++|+|+++|++++++++ ..++++
T Consensus       278 ~dll~~ll~~~---------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~  348 (502)
T PLN02426        278 KDLLSRFMASI---------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFE  348 (502)
T ss_pred             chHHHHHHhcC---------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHH
Confidence            79999999753         26788999999999999999999999999999999999999999999998753 468999


Q ss_pred             hhcCCccHHHHHHHHhhcCCCCcCcccccccccCCc-CceeeCCCCEEEEeeeecccCCCCC-CCCCCCCCCcccCCCCC
Q 037990          332 DIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNM-QGYYIPKETQILVNVWAIGRDPKTW-KDPLLFKPERFLEPTNY  409 (492)
Q Consensus       332 ~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~  409 (492)
                      ++++||||+|||+|+||++|+++.. .|.+.+|.++ +|+.||+||.|.++++++||||++| |||++|+||||+++...
T Consensus       349 ~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~  427 (502)
T PLN02426        349 EMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF  427 (502)
T ss_pred             HHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc
Confidence            9999999999999999999999985 5888888776 9999999999999999999999999 99999999999874211


Q ss_pred             cccccccCccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhceeeecCCCCCcccccccccceeeccCCCeeEeeecc
Q 037990          410 NMMVEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLADGLKPEEMDMTERMGITLRKSVPLKAIPIPY  489 (492)
Q Consensus       410 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (492)
                           ....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++...   ......+++..++.+++|++++|
T Consensus       428 -----~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        428 -----VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR---APRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             -----CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC---CCcccceeEEecCCCEEEEEEEc
Confidence                 1123457899999999999999999999999999999999998644211   11223467788888999999987


Q ss_pred             C
Q 037990          490 R  490 (492)
Q Consensus       490 ~  490 (492)
                      .
T Consensus       500 ~  500 (502)
T PLN02426        500 V  500 (502)
T ss_pred             c
Confidence            5


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=9.8e-61  Score=458.90  Aligned_cols=420  Identities=16%  Similarity=0.143  Sum_probs=296.8

Q ss_pred             cccCCCCCCCCCCcccccccccCC--CCCCCcHHHHHHHHhcCC-cEEEecCCeeE-------EEecCHHHHHHHHHh--
Q 037990           13 LERQRLPPGPRWWPVVGNIFQLGW--MPMPPHASFAILAHKHGP-LMTLWLGSMCT-------VVVSSNEVARDMFKN--   80 (492)
Q Consensus        13 ~~~~~~pPgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------vvv~dpe~i~~i~~~--   80 (492)
                      ..|.+.|||+.|||++|+++.+..  ...++..|+.+.++|||+ ||+++++|.|+       |+++|||.++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            345677999999999999986522  111678999999999999 99999998666       999999999999975  


Q ss_pred             --CCcccccCccccccccccCCCc--eEEeccCChhHHHHHHhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHh-cCCC
Q 037990           81 --HDVVLAGRKIYEAMKGDYGTEG--SIITSQYGAHWRMLRRLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEA-EACA  155 (492)
Q Consensus        81 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~-~~g~  155 (492)
                        +...+..  .++....+++ +.  ..++..+|+.|+++|+++. +.|+. .++.+.+.|.+.++++++.|... ..+.
T Consensus        93 ~~~~~~~~~--~~~~~~~l~G-~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         93 VDKRDVFTG--TYMPSTAFTG-GYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccccee--eeccCccccC-CceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence              3333332  1222222332 22  1566778999999999998 78884 67889999999999999999654 2556


Q ss_pred             ceehHHHHHHHHHHHHHHHhhccccCCCCchhHHHHHHHHHHHHHhhCCccccccch-hhhhcCcchhh-h--hhHHHHH
Q 037990          156 PIDVGRFIFLMAFNLIGNLMFSKDLLGPESERGAKFSYHAGKVMELAGKPNVADFLP-ILRWLDPQGIR-K--KTQFHVE  231 (492)
Q Consensus       156 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~-~--~~~~~~~  231 (492)
                      ++|+.+.+..+++|++++++||.+.+. + ...+.+......+............+| ++..+...... .  ......+
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~-~-~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  245 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSE-T-ALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYD  245 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcch-h-hhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHH
Confidence            799999999999999999999987654 1 011112122222111000000000001 00000000000 0  0000111


Q ss_pred             HHHHHHHHHHHHHHhhhhhccccHHHHHHhhccCCCCCCccCchhHHHHHHHH-HHhccccchHHHHHHHHHHHhhChH-
Q 037990          232 RAFEIAGGFIKERMEDNEEKKKDFLDVLLAFHGDGVDEPAKFSSRTINVIVFE-MFTAGTDTTTSTLEWAMAELLHDPE-  309 (492)
Q Consensus       232 ~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~-~l~AG~~tta~tl~~~l~~L~~~P~-  309 (492)
                      .+.+++.+               .++.+++...+     ..++++++.++++. +.++|++|++++++|++|+|++||+ 
T Consensus       246 ~~~~~~~~---------------~~~~ll~~~~~-----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~  305 (480)
T PLN02648        246 KLYDFFRA---------------SATEALDLAEK-----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEE  305 (480)
T ss_pred             HHHHHHHH---------------HHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHH
Confidence            11111111               12233332221     23899999999875 4477788888899999999999995 


Q ss_pred             HHHHHHHHHhhhcCC-CCCCChhhhcCCccHHHHHHHHhhcCCCCcCcccccccccCCcC----ceeeCCCCEEEEeeee
Q 037990          310 TLKKVQDELRSVVSP-NKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQ----GYYIPKETQILVNVWA  384 (492)
Q Consensus       310 ~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~----g~~ip~g~~v~~~~~~  384 (492)
                      +|+++++|++++.+. +..++++++++||||++||+|+||++|++++. .|++.+|++++    ||.||+|+.|+++.+.
T Consensus       306 v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~  384 (480)
T PLN02648        306 LQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPL  384 (480)
T ss_pred             HHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHH
Confidence            999999999999863 45789999999999999999999999999985 47789999995    7999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCcccCCCCCccccccc-CccceeeccCCCCCCCCChHHHHHHHHHHHHHHHHhce-eeecCC
Q 037990          385 IGRDPKTWKDPLLFKPERFLEPTNYNMMVEYK-GHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFD-WVLADG  460 (492)
Q Consensus       385 ~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~  460 (492)
                      +||||++|+||++|||+||++++......... .......+||+|+|.|+|++||++|++++++.|+++|+ +++.++
T Consensus       385 ~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        385 VTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence            99999999999999999998753221000000 00111233477889999999999999999999999998 998766


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.2e-55  Score=419.21  Aligned_cols=359  Identities=26%  Similarity=0.366  Sum_probs=292.9

Q ss_pred             cHHHHHHHHhcCCcEEEecCCee--EEEecCHHHHHHHHHhCCcccccCccccccc--cccCCCceEEeccCChhHHHHH
Q 037990           42 HASFAILAHKHGPLMTLWLGSMC--TVVVSSNEVARDMFKNHDVVLAGRKIYEAMK--GDYGTEGSIITSQYGAHWRMLR  117 (492)
Q Consensus        42 ~~~~~~~~~kyG~v~~i~~~~~~--~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~R  117 (492)
                      ......+.+.||.++.+...+..  ++++++++.+++++.++. .++.........  .....+.+.++..+|+.|.++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            44556678889998888876654  799999999999998874 222221111110  0111234446778899999999


Q ss_pred             HhhhhcccchhhHhhcHHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHhhccccCCCCchhHHHHHHHHHH
Q 037990          118 RLCTTEFFVTSRLDATRGVRSKCIDRMVQFVEEAEACAPIDVGRFIFLMAFNLIGNLMFSKDLLGPESERGAKFSYHAGK  197 (492)
Q Consensus       118 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~g~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~  197 (492)
                      |+++ +.|+++.++.+.+.+.+.++++++.+ .  .++.+++.+.+..+++++|+ .+||.+....     ..+......
T Consensus       104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-----~~~~~~~~~  173 (411)
T COG2124         104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-W--QGGADLVLDFAAELTLRVIA-ELLGVPLEDR-----PQLLRWSDA  173 (411)
T ss_pred             HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c--cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH-----HHHHHHHHH
Confidence            9998 89999999999999999999999999 4  33788899999999999999 9999987532     222222222


Q ss_pred             HHHhhCCccccccchhhhhcCcchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccccHHHHHHhhccCCCCCCccCchhH
Q 037990          198 VMELAGKPNVADFLPILRWLDPQGIRKKTQFHVERAFEIAGGFIKERMEDNEEKKKDFLDVLLAFHGDGVDEPAKFSSRT  277 (492)
Q Consensus       198 ~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~  277 (492)
                      ......        |...   ......+...+...+.+++..+|++|+.   ...+|+++.|+.+..++   +..++++|
T Consensus       174 ~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~---~~~~dlls~l~~a~~~~---~~~lsd~E  236 (411)
T COG2124         174 LLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRA---APRDDLLSLLLSAEDDG---GGRLSDDE  236 (411)
T ss_pred             HHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc---CCcccHHHHHHHHhhCC---CCcCCHHH
Confidence            222100        1111   1122355667789999999999999984   36789999999887652   22699999


Q ss_pred             HHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhcCCCCCCChhhhcCCccHHHHHHHHhhcCCCCcCcc
Q 037990          278 INVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVVSPNKKLEEEDIEQLPYLKAVIKETLRLHPPLPFLV  357 (492)
Q Consensus       278 i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~  357 (492)
                      +.++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||++++|+|+||++||++. +
T Consensus       237 i~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~  299 (411)
T COG2124         237 IRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-A  299 (411)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-c
Confidence            9999999999999999999999999999999999999998774                7999999999999999999 8


Q ss_pred             cccccccCCcCceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChHH
Q 037990          358 PHMAMDSCNMQGYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMPL  437 (492)
Q Consensus       358 ~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  437 (492)
                      +|.+++|++++|+.||+|+.|+++++++||||++|++|++|||+||.               ..++|||+|+|.|+|++|
T Consensus       300 ~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------------~~~l~FG~G~H~ClG~~l  364 (411)
T COG2124         300 RRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------------NAHLPFGGGPHRCLGAAL  364 (411)
T ss_pred             ceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------------CCCcCCCCCCccccCHHH
Confidence            89999999999999999999999999999999999999999999987               167999999999999999


Q ss_pred             HHHHHHHHHHHHHHhceeeecCC
Q 037990          438 ASRVLPLALGSLLHSFDWVLADG  460 (492)
Q Consensus       438 A~~~~~~~~~~ll~~~~~~~~~~  460 (492)
                      |++|++++++.|+++|++....+
T Consensus       365 A~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         365 ARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHHHHHHHHHHHhCchhhcCC
Confidence            99999999999999998887655


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=76.82  E-value=11  Score=23.23  Aligned_cols=44  Identities=25%  Similarity=0.310  Sum_probs=37.7

Q ss_pred             hHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 037990          276 RTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELR  319 (492)
Q Consensus       276 ~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~  319 (492)
                      -++..++..++-.|.|-.+-.++.-|...--||+....+..|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            45677788888899999999999999999999999998888763


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.86  E-value=14  Score=23.85  Aligned_cols=24  Identities=25%  Similarity=0.499  Sum_probs=18.5

Q ss_pred             HHHHHhhChHHHHHHHHHHhhhcC
Q 037990          300 AMAELLHDPETLKKVQDELRSVVS  323 (492)
Q Consensus       300 ~l~~L~~~P~~~~~l~~Ei~~~~~  323 (492)
                      .+.+|.+||++.+++.+.=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            467899999999999975444443


No 35 
>PRK06789 flagellar motor switch protein; Validated
Probab=33.51  E-value=31  Score=23.70  Aligned_cols=41  Identities=10%  Similarity=0.100  Sum_probs=32.6

Q ss_pred             HHHHHHhhcCCCCcCccccccccc--CCcCceeeCCCCEEEEe
Q 037990          341 AVIKETLRLHPPLPFLVPHMAMDS--CNMQGYYIPKETQILVN  381 (492)
Q Consensus       341 a~i~E~lRl~~~~~~~~~R~~~~~--~~i~g~~ip~g~~v~~~  381 (492)
                      .-++|-|.+.+-...-+-|.+-++  +.++|..|.+|+.|.++
T Consensus        20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            357889999998877676777664  55699999999999875


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=31.47  E-value=48  Score=25.80  Aligned_cols=23  Identities=13%  Similarity=0.225  Sum_probs=17.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHh
Q 037990          430 RMCPAMPLASRVLPLALGSLLHS  452 (492)
Q Consensus       430 r~C~G~~~A~~~~~~~~~~ll~~  452 (492)
                      ..|.|+.||..++-.+|.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999964


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=31.35  E-value=22  Score=22.40  Aligned_cols=11  Identities=45%  Similarity=0.942  Sum_probs=9.1

Q ss_pred             eccCCCCCCCC
Q 037990          423 IPFGSGRRMCP  433 (492)
Q Consensus       423 ~~Fg~G~r~C~  433 (492)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999884


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=30.78  E-value=32  Score=29.13  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=32.1

Q ss_pred             CCccHHHHHHHHhhcCCCCcCcccccccccCCcCceeeCCCCEEEE
Q 037990          335 QLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYYIPKETQILV  380 (492)
Q Consensus       335 ~l~~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  380 (492)
                      .-..+.|||.|+.-+..-...-  =+..+|+.++|..||||+.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            3456778999987765554432  2467789999999999987754


No 39 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=30.56  E-value=2.3e+02  Score=21.80  Aligned_cols=94  Identities=16%  Similarity=0.250  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhhc----cccHHHHHHhhcc-----CCCCCCccCchhHHHHHHHHHHhccccchHHHHHHH-
Q 037990          231 ERAFEIAGGFIKERMEDNEEK----KKDFLDVLLAFHG-----DGVDEPAKFSSRTINVIVFEMFTAGTDTTTSTLEWA-  300 (492)
Q Consensus       231 ~~~~~~~~~~i~~r~~~~~~~----~~d~l~~ll~~~~-----~~~~~~~~l~~~~i~~~~~~~l~AG~~tta~tl~~~-  300 (492)
                      ....+-+..++++++++++.+    -.+..+.|++...     ...+.+.+++.++.-..++.-+.-...+++..|... 
T Consensus        10 ~~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~   89 (127)
T PF05261_consen   10 NKVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSS   89 (127)
T ss_dssp             HCHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            445566777888888874332    2245556664321     111235678888877777777766555555554432 


Q ss_pred             -HHHHhhCh---------HHHHHHHHHHhhhcCC
Q 037990          301 -MAELLHDP---------ETLKKVQDELRSVVSP  324 (492)
Q Consensus       301 -l~~L~~~P---------~~~~~l~~Ei~~~~~~  324 (492)
                       .-++..+|         ++.++++++++..++.
T Consensus        90 ls~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFpe  123 (127)
T PF05261_consen   90 LSPEVKGNPKFEYENMVEKIREKVSEEMERFFPE  123 (127)
T ss_dssp             CSHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-C
T ss_pred             ccHhhccCCcccHHHHHHHHHHHHHHHHHhcCCC
Confidence             23343333         4556666666666653


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=30.52  E-value=2e+02  Score=20.50  Aligned_cols=49  Identities=14%  Similarity=0.216  Sum_probs=40.5

Q ss_pred             chhHHHHHHHHHHhccccchHHHHHHHHHHHhhChHHHHHHHHHHhhhc
Q 037990          274 SSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHDPETLKKVQDELRSVV  322 (492)
Q Consensus       274 ~~~~i~~~~~~~l~AG~~tta~tl~~~l~~L~~~P~~~~~l~~Ei~~~~  322 (492)
                      ............++-=+++++....-.+.+-+.||+..++|.+.+.+-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4455556666778888999999999999999999999999999887643


No 41 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.71  E-value=1.8e+02  Score=20.75  Aligned_cols=35  Identities=14%  Similarity=0.104  Sum_probs=27.1

Q ss_pred             HHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHh
Q 037990           46 AILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKN   80 (492)
Q Consensus        46 ~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~   80 (492)
                      .+.-++||+|..+.=-.+-.+.-++-+.+++++.+
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            45568999998876555556667999999999876


No 42 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=26.25  E-value=20  Score=29.11  Aligned_cols=35  Identities=20%  Similarity=0.360  Sum_probs=24.7

Q ss_pred             CCCCCcccCCCCCcccccccCccceeeccCCCCCCCCChH
Q 037990          397 LFKPERFLEPTNYNMMVEYKGHHFEFIPFGSGRRMCPAMP  436 (492)
Q Consensus       397 ~F~p~R~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  436 (492)
                      +|+|++|-+---.     ....+.+.+-|..|+=.|.|..
T Consensus        36 eYnP~qFpGlv~R-----l~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          36 EYNPEQFPGLVYR-----LEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             ccCHhHCCeeEEE-----ecCCcceEEEEecCcEEEeccC
Confidence            7999999542100     1223347899999999999976


No 43 
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=24.55  E-value=60  Score=32.25  Aligned_cols=61  Identities=15%  Similarity=0.188  Sum_probs=45.0

Q ss_pred             ccccchHHHHHHHHHHHhhC-hHHHHHHHHHHhhhcCCCCCCChhhhcCCccHHHHHHHHhh
Q 037990          288 AGTDTTTSTLEWAMAELLHD-PETLKKVQDELRSVVSPNKKLEEEDIEQLPYLKAVIKETLR  348 (492)
Q Consensus       288 AG~~tta~tl~~~l~~L~~~-P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  348 (492)
                      .|+|-|+.+=..+++.|+++ .+.++||-+=+...-.++.+++.+|++----+.+.+++++.
T Consensus       193 ~gFdIT~ASEiMAilcLa~~l~Dl~~Rl~~ivv~~~~~~~pvt~~dl~~~GAm~~lLkdAi~  254 (557)
T PRK13505        193 DGFDITVASEIMAILCLATDLKDLKERLGRIVVGYTYDGKPVTVKDLKVEGAMALLLKDAIK  254 (557)
T ss_pred             CCceeeHHHHHHHHHHHhCCHHHHHHHHhCEEEEEcCCCCceeHHHcCchHHHHHHHHhhcc
Confidence            47787888888888899987 45444444333322234678999999999899999999985


No 44 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.50  E-value=2e+02  Score=22.35  Aligned_cols=40  Identities=10%  Similarity=0.111  Sum_probs=30.6

Q ss_pred             CCcHHHHHHHHhcCCcEEEecCCeeEEEecCHHHHHHHHHhC
Q 037990           40 PPHASFAILAHKHGPLMTLWLGSMCTVVVSSNEVARDMFKNH   81 (492)
Q Consensus        40 ~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dpe~i~~i~~~~   81 (492)
                      +....+++|.++||.+--.  .+..++...|++.++++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            4566899999999987432  245677899999999998654


No 45 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=23.49  E-value=3.2e+02  Score=20.40  Aligned_cols=60  Identities=20%  Similarity=0.150  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCcccccccccCCCCCCCcHHHHHHHHhcCCcEEEecC------CeeEEEecCHHHHHHHHHh
Q 037990           16 QRLPPGPRWWPVVGNIFQLGWMPMPPHASFAILAHKHGPLMTLWLG------SMCTVVVSSNEVARDMFKN   80 (492)
Q Consensus        16 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------~~~~vvv~dpe~i~~i~~~   80 (492)
                      .++||-...+-++-|+..-     -..+-+.++.-+||+|..+.+|      |.-+||-.|-..++..+..
T Consensus        11 ~rlppevnriLyirNLp~~-----ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPFK-----ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCChhhheeEEEecCCcc-----ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3566666555555554322     2345667788899999999987      4456777777777766643


No 46 
>cd00477 FTHFS Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate. FTHFS is a highly expressed key enzyme in both the Wood-Ljungdahl pathway of autotrophic CO2 fixation (acetogenesis) and the glycine synthase/reductase pathways of purinolysis. The key physiological role of this enzyme in acetogens is to catalyze the formylation of tetrahydrofolate, an initial step in the reduction of carbon dioxide and other one-carbon precursors to acetate. In purinolytic organisms, the enzymatic reaction is reversed, liberating formate from 10-formyltetrahydrofolate with concurrent production of ATP.
Probab=23.11  E-value=68  Score=31.49  Aligned_cols=110  Identities=14%  Similarity=0.165  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhh-----------ccccHHHHHHhhccCCCC-CCccCchhHHHHHHHHHHhccccchHH
Q 037990          228 FHVERAFEIAGGFIKERMEDNEE-----------KKKDFLDVLLAFHGDGVD-EPAKFSSRTINVIVFEMFTAGTDTTTS  295 (492)
Q Consensus       228 ~~~~~~~~~~~~~i~~r~~~~~~-----------~~~d~l~~ll~~~~~~~~-~~~~l~~~~i~~~~~~~l~AG~~tta~  295 (492)
                      .+....++++...|+.++.++.+           .--|+-+.-|+...-+.. ...+.+.           -.|+|-|+.
T Consensus       115 hAItaA~NLlaA~iDn~i~~gn~l~iDp~~I~w~Rv~D~NDR~LR~iviglGg~~~G~~r-----------e~gFdITvA  183 (524)
T cd00477         115 HAITAANNLLAAAIDNHIHHGNRLDIDPRRITWKRVLDVNDRALRKIVIGLGGKENGVPR-----------ETGFDITVA  183 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccCCCcceeEEEecccccchhhhceEeccCCCCCCccc-----------cCCceeeHH
Confidence            45666777778888887765221           112333444433211100 0011221           257888888


Q ss_pred             HHHHHHHHHhhC-hHHHHHHHHHHhhhcCCCCCCChhhhcCCccHHHHHHHHhh
Q 037990          296 TLEWAMAELLHD-PETLKKVQDELRSVVSPNKKLEEEDIEQLPYLKAVIKETLR  348 (492)
Q Consensus       296 tl~~~l~~L~~~-P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  348 (492)
                      +=..+++.|+++ .+.++||-+=+...--++.+++.+|++----+.+.+++++.
T Consensus       184 SEiMAIlcLa~~l~DLk~Rl~~ivv~~~~~g~PVta~DL~~~GAmt~LLkdAik  237 (524)
T cd00477         184 SEIMAILCLATDLEDLKERLGRIVVAYSKDGEPVTAEDLGVAGAMAVLLKDAIK  237 (524)
T ss_pred             HHHHHHHHHcCCHHHHHHHHhCEEEEEcCCCCcEeHHHcCchHhHHHHHHhhhC
Confidence            888888899987 45555544433322234678999999999999999999985


No 47 
>PHA03162 hypothetical protein; Provisional
Probab=22.00  E-value=76  Score=24.43  Aligned_cols=24  Identities=21%  Similarity=0.436  Sum_probs=19.7

Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHH
Q 037990          426 GSGRRMCPAMPLASRVLPLALGSL  449 (492)
Q Consensus       426 g~G~r~C~G~~~A~~~~~~~~~~l  449 (492)
                      ++|.+.|||+...+-++-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999888887776665


No 48 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=21.79  E-value=1.2e+02  Score=21.86  Aligned_cols=27  Identities=30%  Similarity=0.471  Sum_probs=20.8

Q ss_pred             HHHHHHHHHhhChHHHHHHHHHHhhhc
Q 037990          296 TLEWAMAELLHDPETLKKVQDELRSVV  322 (492)
Q Consensus       296 tl~~~l~~L~~~P~~~~~l~~Ei~~~~  322 (492)
                      ++.|-+...-..||..+.+++||+++-
T Consensus        55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   55 TLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            455566666668999999999999863


No 49 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=21.40  E-value=1.6e+02  Score=26.97  Aligned_cols=70  Identities=20%  Similarity=0.329  Sum_probs=41.8

Q ss_pred             HHHHHHHhhcCCCC---cCcccccccccCCc--C--ceeeCCCCEEEEeeeecccCCCCCCCCCCCCCCcccCCCCCccc
Q 037990          340 KAVIKETLRLHPPL---PFLVPHMAMDSCNM--Q--GYYIPKETQILVNVWAIGRDPKTWKDPLLFKPERFLEPTNYNMM  412 (492)
Q Consensus       340 ~a~i~E~lRl~~~~---~~~~~R~~~~~~~i--~--g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~  412 (492)
                      +.+++.|-.+.||.   |+++.-.++.|..+  -  .-+|..||.|.++                               
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-------------------------------  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-------------------------------  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-------------------------------
Confidence            45778888888865   34343444444433  1  2346666655443                               


Q ss_pred             ccccCccceeeccCCCCCCCCChHHHHHHHHHHHH
Q 037990          413 VEYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALG  447 (492)
Q Consensus       413 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~  447 (492)
                          .++++++-||.+  +-.|+++|. |+|.++-
T Consensus       325 ----GspYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         325 ----GSPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             ----CCcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence                233455556644  678999998 7877653


No 50 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.37  E-value=2.2e+02  Score=17.75  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=24.7

Q ss_pred             HHHHHhcCCcEEEecC----CeeEEEecCHHHHHHHHHh
Q 037990           46 AILAHKHGPLMTLWLG----SMCTVVVSSNEVARDMFKN   80 (492)
Q Consensus        46 ~~~~~kyG~v~~i~~~----~~~~vvv~dpe~i~~i~~~   80 (492)
                      .++.++||+|-.+.+.    +.-+|-..+.+.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            4677899999887753    3345667888888888763


No 51 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=21.29  E-value=86  Score=19.95  Aligned_cols=17  Identities=24%  Similarity=0.212  Sum_probs=15.0

Q ss_pred             cCCcEEEecCCeeEEEe
Q 037990           52 HGPLMTLWLGSMCTVVV   68 (492)
Q Consensus        52 yG~v~~i~~~~~~~vvv   68 (492)
                      =|+++++..||..++|.
T Consensus         3 ~GDvV~LKSGGp~MTV~   19 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVT   19 (53)
T ss_pred             CCCEEEEccCCCCeEEE
Confidence            38999999999999887


No 52 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=20.98  E-value=76  Score=22.51  Aligned_cols=21  Identities=24%  Similarity=0.499  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHHhceeeecCC
Q 037990          440 RVLPLALGSLLHSFDWVLADG  460 (492)
Q Consensus       440 ~~~~~~~~~ll~~~~~~~~~~  460 (492)
                      ..|+-++..+|+-|||.|++=
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            468899999999999999753


Done!