Query 037991
Match_columns 560
No_of_seqs 324 out of 1295
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:37:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037991.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037991hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 98.9 1.8E-08 6.1E-13 98.3 13.1 104 281-387 2-115 (255)
2 3bcv_A Putative glycosyltransf 98.8 2.9E-08 1E-12 95.7 11.1 105 280-387 5-111 (240)
3 3ckj_A Putative uncharacterize 98.6 3.2E-07 1.1E-11 94.4 13.0 101 279-387 47-156 (329)
4 2z86_A Chondroitin synthase; G 98.5 7.1E-07 2.4E-11 99.2 13.7 121 279-405 374-496 (625)
5 3f1y_A Mannosyl-3-phosphoglyce 98.4 7.2E-07 2.5E-11 94.5 10.1 104 279-387 93-207 (387)
6 1xhb_A Polypeptide N-acetylgal 98.3 3.3E-06 1.1E-10 90.7 13.9 108 278-387 27-141 (472)
7 2d7i_A Polypeptide N-acetylgal 98.3 3.8E-06 1.3E-10 93.0 12.9 107 279-387 111-223 (570)
8 4fix_A UDP-galactofuranosyl tr 98.2 8.1E-06 2.8E-10 92.1 12.9 107 278-388 178-296 (657)
9 2z86_A Chondroitin synthase; G 98.1 1.4E-05 4.7E-10 88.8 13.1 106 279-387 92-201 (625)
10 2ffu_A Ppgalnact-2, polypeptid 98.1 2.4E-05 8.3E-10 84.8 13.7 103 279-387 65-173 (501)
11 3l7i_A Teichoic acid biosynthe 98.0 7.5E-07 2.6E-11 101.3 0.0 104 281-386 3-109 (729)
12 4hg6_A Cellulose synthase subu 97.7 8.3E-05 2.8E-09 85.7 10.6 114 280-400 140-275 (802)
13 2bo4_A Mannosylglycerate synth 97.5 0.00018 6.2E-09 76.3 7.9 100 283-388 2-118 (397)
14 2wvl_A Mannosyl-3-phosphoglyce 97.0 0.0017 6E-08 67.5 9.4 123 280-405 53-205 (391)
15 2nxv_A ATP synthase subunits r 97.0 0.0012 4.2E-08 64.7 7.9 84 278-387 14-101 (249)
16 2zu9_A Mannosyl-3-phosphoglyce 96.3 0.0088 3E-07 63.2 8.4 89 281-371 52-171 (394)
17 2fy7_A Beta-1,4-galactosyltran 95.2 0.057 2E-06 54.5 9.2 74 278-376 63-145 (287)
18 1fo8_A Alpha-1,3-mannosyl-glyc 94.3 0.077 2.6E-06 55.1 7.5 114 281-398 3-137 (343)
19 2l82_A Designed protein OR32; 82.7 3.5 0.00012 35.6 7.1 52 286-337 83-134 (162)
20 4fcu_A 3-deoxy-manno-octuloson 70.9 20 0.00069 34.8 10.0 88 293-388 27-116 (253)
21 3tqd_A 3-deoxy-manno-octuloson 67.5 21 0.0007 34.9 9.2 87 294-388 36-123 (256)
22 3oam_A 3-deoxy-manno-octuloson 64.7 34 0.0011 32.8 10.1 88 293-388 28-116 (252)
23 3k8d_A 3-deoxy-manno-octuloson 63.8 28 0.00096 34.1 9.4 85 294-388 45-132 (264)
24 3lw6_A FI08434P, beta-4-galact 54.3 29 0.00098 34.8 7.5 75 277-373 48-126 (287)
25 1ezi_A CMP-N-acetylneuraminic 45.3 1.1E+02 0.0036 28.3 9.8 90 293-389 30-123 (228)
26 2waw_A MOBA relate protein; un 44.4 24 0.00082 31.8 4.9 89 293-387 32-120 (199)
27 1h7e_A 3-deoxy-manno-octuloson 43.1 1.2E+02 0.0039 28.3 9.8 86 293-388 28-114 (245)
28 1vic_A 3-deoxy-manno-octuloson 36.7 1.2E+02 0.004 28.8 8.8 85 293-387 28-115 (262)
29 2wee_A MOBA-related protein; u 36.5 38 0.0013 30.4 4.9 89 293-387 32-120 (197)
30 4ecm_A Glucose-1-phosphate thy 36.0 1.4E+02 0.0048 28.5 9.3 88 293-388 56-146 (269)
31 1qwj_A Cytidine monophospho-N- 35.6 1.4E+02 0.0048 27.7 9.0 87 293-388 29-120 (229)
32 2vsh_A TARI, 2-C-methyl-D-eryt 25.6 69 0.0023 29.6 4.8 88 293-388 32-131 (236)
33 2l69_A Rossmann 2X3 fold prote 25.4 1.2E+02 0.0041 25.3 5.5 60 278-338 47-107 (134)
34 3f1c_A Putative 2-C-methyl-D-e 23.8 1.5E+02 0.0053 27.8 7.0 92 293-389 33-131 (246)
35 4fce_A Bifunctional protein GL 21.5 2.4E+02 0.0083 28.8 8.5 90 293-390 37-126 (459)
36 1omz_A Alpha-1,4-N-acetylhexos 21.4 3E+02 0.01 27.5 8.6 101 278-386 26-129 (293)
37 2l82_A Designed protein OR32; 21.3 3.9E+02 0.013 22.8 9.4 98 284-390 4-101 (162)
38 4ayl_A BOGT-metal-independent 21.2 2.6E+02 0.0087 27.3 7.8 91 281-378 2-105 (246)
39 1vgw_A 4-diphosphocytidyl-2C-m 20.7 3.5E+02 0.012 24.5 8.8 92 292-390 34-131 (231)
40 2gak_A Beta-1,6-N-acetylglucos 20.4 3.8E+02 0.013 27.5 9.6 110 277-389 81-200 (391)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.86 E-value=1.8e-08 Score=98.34 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=80.1
Q ss_pred eEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCC--------CcchHHHHH
Q 037991 281 EMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWP--------WIKTQEAGF 350 (560)
Q Consensus 281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp--------~~~~Q~~a~ 350 (560)
.|||++.++|++++|.++|++...+-. -+|+|+|++|+|+|.++++++.+ ...|....-+ ...+...+.
T Consensus 2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~ 80 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALI 80 (255)
T ss_dssp CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHH
Confidence 589999999999999999999876544 38999999999999999999965 3335555444 345566677
Q ss_pred HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
|.++..+ .++||+|+|.|.++.|..-..+.+.+++
T Consensus 81 N~gi~~a--~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 81 NQAIEMA--EGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp HHHHHHC--CCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred HHHHHHc--CCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 8887775 8899999999999976433344455544
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.77 E-value=2.9e-08 Score=95.71 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=78.3
Q ss_pred ceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHc
Q 037991 280 HEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRA 357 (560)
Q Consensus 280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~ 357 (560)
..++|++.++|++++|.++|++...+-. -+++|+|++|+|+|.++++++.+...+|.... ....+...+.|.++..+
T Consensus 5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a 83 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVA 83 (240)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHc
Confidence 3689999999999999999999876543 38999999999999999999865332344443 22344556778877775
Q ss_pred cCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 358 RDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
..+||+|+|.|..+.|..-..+.+.+++
T Consensus 84 --~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 84 --TGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp --CSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred --CCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 7899999999999876433444455544
No 3
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.58 E-value=3.2e-07 Score=94.38 Aligned_cols=101 Identities=12% Similarity=0.065 Sum_probs=76.0
Q ss_pred CceEEEEEEecchHHHHHHHHHHHhhcC---ccEEEEEECCCCcCHHHHHHHhccCCceEEEE-----eCCCcchHHHHH
Q 037991 279 DHEMCICTMLRNQARFIREWVMYHARIG---VQRWFIYDNNSNDNIESVIDSLSSEKFNITRH-----VWPWIKTQEAGF 350 (560)
Q Consensus 279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~G---vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~-----~wp~~~~Q~~a~ 350 (560)
...+||++.+|||+++|.++|++...+- ..+|+|+|++|+|+|.++++++ +..+... ..+...+...+.
T Consensus 47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~---~~~~~~~~~~~~~~~~n~G~~~a~ 123 (329)
T 3ckj_A 47 GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAA---GARVVSREQALPEVPIRPGKGEAL 123 (329)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHT---TCEEEEHHHHCTTSCCCCSHHHHH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHh---hhhhccceeeeccCCCCCCHHHHH
Confidence 4579999999999999999999987652 4799999999999999999998 4332211 133344556677
Q ss_pred HHHHHHccCCCcEEEEecCCce-eecCCcchHHHHHHh
Q 037991 351 AHCALRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRN 387 (560)
Q Consensus 351 ndCl~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~ 387 (560)
|.++..+ .++||+++|+|.. +.|. .|..+++.
T Consensus 124 n~g~~~a--~gd~i~~lD~D~~~~~p~---~l~~l~~~ 156 (329)
T 3ckj_A 124 WRSLAAS--RGDIVVFVDSDLINPHPM---FVPWLVGP 156 (329)
T ss_dssp HHHHHHC--CCSEEEECCTTEESCCTT---HHHHHHHH
T ss_pred HHHHHhC--CCCEEEEECCCCCCcChH---HHHHHHHH
Confidence 8887765 7899999999999 6654 34444443
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.49 E-value=7.1e-07 Score=99.18 Aligned_cols=121 Identities=13% Similarity=0.087 Sum_probs=83.5
Q ss_pred CceEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHH
Q 037991 279 DHEMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALR 356 (560)
Q Consensus 279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r 356 (560)
...++|++.++|++++|.++|++...+-. -+++|+|++|+|+|.++++++.+....+.... +...+...+.|.++..
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~~ 452 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRL 452 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHHh
Confidence 45799999999999999999999765533 38999999999999999999855432343333 2233455567888777
Q ss_pred ccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEEeeeeC
Q 037991 357 ARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRISCHSFG 405 (560)
Q Consensus 357 ~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~~~~fg 405 (560)
+ .++||+++|.|.++.|. .|..+++.+..++.++.+.-....+.
T Consensus 453 a--~g~~i~~ld~D~~~~~~---~l~~~~~~~~~~~~~~~v~~~~~~~~ 496 (625)
T 2z86_A 453 C--RGFYIGQLDSDDFLEPD---AVELCLDEFRKDLSLACVYTTNRNID 496 (625)
T ss_dssp C--CSSEEEECCTTCEECTT---HHHHHHHHHHHCTTCSEEEEEEEEEC
T ss_pred c--CCCEEEEECCCcccChh---HHHHHHHHHHhCCCeeEEEeeeEEEC
Confidence 5 78999999999998664 34444433322234555544333333
No 5
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.40 E-value=7.2e-07 Score=94.48 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=76.2
Q ss_pred CceEEEEEEecchHHHHHHHHHHHhhc-----CccEEEEEECCCCcCHHHHHHHhccCCceEEEEe-----CCCcchHHH
Q 037991 279 DHEMCICTMLRNQARFIREWVMYHARI-----GVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV-----WPWIKTQEA 348 (560)
Q Consensus 279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~-----Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~-----wp~~~~Q~~ 348 (560)
...++|++.+|||++.|.++|+....+ ...+|+|+|++|+|+|.++++++ +..+.... .+...+...
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~---~~~v~~~~~~~i~~~~n~G~g~ 169 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASH---GAEVYSENELMSGYGDAHGKGD 169 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHT---TCEEEEGGGTTGGGCSCCSHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHh---CchhcccceeEecCCccCCHHH
Confidence 457999999999999999999987542 35799999999999999999999 43332221 233344555
Q ss_pred HHHHHHHHccCCCcEEEEecCCce-eecCCcchHHHHHHh
Q 037991 349 GFAHCALRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRN 387 (560)
Q Consensus 349 a~ndCl~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~ 387 (560)
++|.++..+ .++||+++|+|.. +.|..-..+.+.+.+
T Consensus 170 A~n~G~~~A--~gd~i~~lDaD~~~~~p~~L~~l~~~l~~ 207 (387)
T 3f1y_A 170 AMWRALSVT--RGDLVLYIDADTRDFRPQLAYGVLGPVLE 207 (387)
T ss_dssp HHHHHTTTC--CSSEEEECCTTCSSCCTHHHHTTHHHHHH
T ss_pred HHHHHHHhc--CCCEEEEEcCCCCcCCHHHHHHHHHHHHH
Confidence 677776654 7899999999999 666433444444433
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.34 E-value=3.3e-06 Score=90.68 Aligned_cols=108 Identities=10% Similarity=-0.028 Sum_probs=80.9
Q ss_pred CCceEEEEEEecchH-HHHHHHHHHHhhcCc----cEEEEEECCCCcC-HHHHHHHhccCCc-eEEEEeCCCcchHHHHH
Q 037991 278 KDHEMCICTMLRNQA-RFIREWVMYHARIGV----QRWFIYDNNSNDN-IESVIDSLSSEKF-NITRHVWPWIKTQEAGF 350 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa-~~L~EwIe~h~~~Gv----d~f~IyDn~StD~-T~eIL~~y~~~G~-~Vt~~~wp~~~~Q~~a~ 350 (560)
....+||++.++||+ ..|.++|++...+-. .+|+|+|++|+|+ |.+++++|.+... .|....-+...+...+.
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~ 106 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRAR 106 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHH
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHH
Confidence 345799999999999 999999998765432 3899999999995 9999999865322 35555555444556677
Q ss_pred HHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 351 AHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 351 ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
|.++..+ .++||+|+|+|..+.|..-..+.+.+++
T Consensus 107 N~g~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~ 141 (472)
T 1xhb_A 107 LKGAAVS--RGQVITFLDAHCECTAGWLEPLLARIKH 141 (472)
T ss_dssp HHHHHHC--CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred HHHHHhc--cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence 7777775 7999999999999876544455555554
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.28 E-value=3.8e-06 Score=93.04 Aligned_cols=107 Identities=11% Similarity=-0.086 Sum_probs=82.5
Q ss_pred CceEEEEEEecchH-HHHHHHHHHHhhcCc-c---EEEEEECCCCcCH-HHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991 279 DHEMCICTMLRNQA-RFIREWVMYHARIGV-Q---RWFIYDNNSNDNI-ESVIDSLSSEKFNITRHVWPWIKTQEAGFAH 352 (560)
Q Consensus 279 ~~~lsVc~i~~NEa-~~L~EwIe~h~~~Gv-d---~f~IyDn~StD~T-~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd 352 (560)
...+||++.++||+ ..|.++|++...+-. + +|+|+|++|+|+| .++|++|.+....|....-+...+-..+.|.
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~ 190 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRML 190 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHH
Confidence 35799999999998 999999998765432 2 8999999999999 9999998654334655555544455567777
Q ss_pred HHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
++..+ ..+||+|+|+|..+.+..-..+.+.+++
T Consensus 191 G~~~A--~gd~i~fLD~D~~~~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 191 GASVA--TGDVITFLDSHCEANVNWLPPLLDRIAR 223 (570)
T ss_dssp HHHHC--CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred HHHhc--CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence 77775 7899999999999977555556666655
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.18 E-value=8.1e-06 Score=92.08 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=75.6
Q ss_pred CCceEEEEEEecchHHHHHHHHHHHhhc-----CccEEEEEECCCCc-----CHHHHHHHhccCCceEEEEeCCCcchHH
Q 037991 278 KDHEMCICTMLRNQARFIREWVMYHARI-----GVQRWFIYDNNSND-----NIESVIDSLSSEKFNITRHVWPWIKTQE 347 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~~-----Gvd~f~IyDn~StD-----~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~ 347 (560)
.+..|||++.++|+++.|.+||++...+ ..++|+|+||+|+| .+.++++.+ +..|..+.-+ ..+-.
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~---~~~I~vI~~~-N~G~a 253 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL---GSRLSIHDQP-NLGGS 253 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH---GGGEEEEECC-CCHHH
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc---CCCEEEEECC-CCCHH
Confidence 3457999999999999999999987643 35699999999998 345566554 3345555444 44445
Q ss_pred HHHHHHHHHccC--CCcEEEEecCCceeecCCcchHHHHHHhc
Q 037991 348 AGFAHCALRARD--VCNWVGFIDVDEFFRLPSGLILHDLIRNL 388 (560)
Q Consensus 348 ~a~ndCl~r~~~--~~dWVlflDaDEfL~p~~~~sI~d~L~~~ 388 (560)
.++|.++..+.. .++||+++|.|-.+.|..-..+.++++..
T Consensus 254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~ 296 (657)
T 4fix_A 254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFA 296 (657)
T ss_dssp HHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhC
Confidence 567777666532 68999999999998864334455555543
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.12 E-value=1.4e-05 Score=88.82 Aligned_cols=106 Identities=17% Similarity=0.030 Sum_probs=77.5
Q ss_pred CceEEEEEEecchHHHHHHHHHHHhhcC---ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcc-hHHHHHHHHH
Q 037991 279 DHEMCICTMLRNQARFIREWVMYHARIG---VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIK-TQEAGFAHCA 354 (560)
Q Consensus 279 ~~~lsVc~i~~NEa~~L~EwIe~h~~~G---vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~-~Q~~a~ndCl 354 (560)
...++|++.++||+..|.++|++...+- -.+|+|+|++|+|+|.++++++.+.. .+....-+..+ +...+.|.++
T Consensus 92 ~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~-~i~~i~~~~~~~g~~~a~N~g~ 170 (625)
T 2z86_A 92 IDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLL-NIKYVRQKDYGYQLCAVRNLGL 170 (625)
T ss_dssp CCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTS-CEEEEEECCCSCCHHHHHHHHH
T ss_pred CCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcC-CeEEEEeCCCCcchhHHHHHHH
Confidence 3579999999999999999999987652 46899999999999999999986532 24333334332 3445667777
Q ss_pred HHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 355 LRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 355 ~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
..+ .++||+++|+|..+.+..-..+.+.+..
T Consensus 171 ~~a--~g~~v~~lD~D~~~~~~~l~~~~~~~~~ 201 (625)
T 2z86_A 171 RAA--KYNYVAILDCDMAPNPLWVQSYMELLAV 201 (625)
T ss_dssp HHC--CSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred HhC--CcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 764 8899999999999965432334444443
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.08 E-value=2.4e-05 Score=84.78 Aligned_cols=103 Identities=13% Similarity=0.011 Sum_probs=75.4
Q ss_pred CceEEEEEEecchHH-HHHHHHHHHhhcCc-c---EEEEEECCCCcCHHH-HHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991 279 DHEMCICTMLRNQAR-FIREWVMYHARIGV-Q---RWFIYDNNSNDNIES-VIDSLSSEKFNITRHVWPWIKTQEAGFAH 352 (560)
Q Consensus 279 ~~~lsVc~i~~NEa~-~L~EwIe~h~~~Gv-d---~f~IyDn~StD~T~e-IL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd 352 (560)
...+||++.++||+. .|.++|++...+-. . +|+|+|++|+|+|.+ +++.+ ..|....-+...+...+.|.
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~----~~v~vi~~~~n~G~~~A~N~ 140 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI----EKVRVLRNDRREGLMRSRVR 140 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGB----TTEEEEECSSCCHHHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcC----CCEEEEECCCCcCHHHHHHH
Confidence 457999999999987 99999998765432 2 899999999999954 33222 23555555555566777888
Q ss_pred HHHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 353 CALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 353 Cl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
++..+ ..+||+|+|+|..+.|..-..+.+.+++
T Consensus 141 G~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 141 GADAA--QAKVLTFLDSHCECNEHWLEPLLERVAE 173 (501)
T ss_dssp HHHHC--CSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred HHHhc--CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 87775 7899999999999876544455555544
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.01 E-value=7.5e-07 Score=101.30 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=0.0
Q ss_pred eEEEEEEecchHHHHHHHHHHHhhcCc--cEEEEEECCCCcCHHHHHHHhccC-CceEEEEeCCCcchHHHHHHHHHHHc
Q 037991 281 EMCICTMLRNQARFIREWVMYHARIGV--QRWFIYDNNSNDNIESVIDSLSSE-KFNITRHVWPWIKTQEAGFAHCALRA 357 (560)
Q Consensus 281 ~lsVc~i~~NEa~~L~EwIe~h~~~Gv--d~f~IyDn~StD~T~eIL~~y~~~-G~~Vt~~~wp~~~~Q~~a~ndCl~r~ 357 (560)
.|||++.++|++++|.++|++...+-. -+|+|+|++|+|+|.++++++.+. +..|....-+...+...+.|.++..+
T Consensus 3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A 82 (729)
T 3l7i_A 3 KLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEV 82 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 589999999999999999998765533 379999999999999999999754 22343333232333445667777664
Q ss_pred cCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991 358 RDVCNWVGFIDVDEFFRLPSGLILHDLIR 386 (560)
Q Consensus 358 ~~~~dWVlflDaDEfL~p~~~~sI~d~L~ 386 (560)
.++||+|+|.|..+.|..-..+.+.+.
T Consensus 83 --~gdyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 83 --ETPYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp -----------------------------
T ss_pred --cCCEEEEECCCCCCChhHHHHHHHHhc
Confidence 789999999999997643344444444
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.73 E-value=8.3e-05 Score=85.66 Aligned_cols=114 Identities=10% Similarity=-0.000 Sum_probs=75.3
Q ss_pred ceEEEEEEecchHHHH-HHHHHHHhhcCc-c---EEEEEECCCCcCHH---------------HHHHHhcc-CCceEEEE
Q 037991 280 HEMCICTMLRNQARFI-REWVMYHARIGV-Q---RWFIYDNNSNDNIE---------------SVIDSLSS-EKFNITRH 338 (560)
Q Consensus 280 ~~lsVc~i~~NEa~~L-~EwIe~h~~~Gv-d---~f~IyDn~StD~T~---------------eIL~~y~~-~G~~Vt~~ 338 (560)
..++|++.+|||++.+ .++|++...+-. + +|+|+|+||+|+|. +.++++.+ .+..+ .
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~--i 217 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY--S 217 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE--E
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE--E
Confidence 4789999999999766 889998765543 2 79999999999993 23443322 24322 2
Q ss_pred eCCC-cchHHHHHHHHHHHccCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEEEE
Q 037991 339 VWPW-IKTQEAGFAHCALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELRIS 400 (560)
Q Consensus 339 ~wp~-~~~Q~~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~~~ 400 (560)
.-+. .++...+.|.++..+ ++|||+++|+|-.+.|. .+..+++....+++++.+.-+
T Consensus 218 ~~~~~~~GKa~alN~gl~~a--~gd~Il~lDaD~~~~pd---~L~~lv~~~~~dp~v~~V~~~ 275 (802)
T 4hg6_A 218 TRERNEHAKAGNMSAALERL--KGELVVVFDADHVPSRD---FLARTVGYFVEDPDLFLVQTP 275 (802)
T ss_dssp ECSSCCSHHHHHHHHHHHHC--CCSEEEECCTTEEECTT---HHHHHHHHHHHSSSCCEEECC
T ss_pred EecCCCCcchHHHHHHHHhc--CCCEEEEECCCCCcChH---HHHHHHHHHhcCCCeEEEecc
Confidence 2222 234455778887774 88999999999998653 455555444223456665543
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.46 E-value=0.00018 Score=76.33 Aligned_cols=100 Identities=7% Similarity=-0.020 Sum_probs=59.2
Q ss_pred EEEEEecchHHHHHHHHHHHh---hcCccEEEEEECCCCcCHHHHHH----Hhc-cCCceEEEEeCC--C--cchHHHHH
Q 037991 283 CICTMLRNQARFIREWVMYHA---RIGVQRWFIYDNNSNDNIESVID----SLS-SEKFNITRHVWP--W--IKTQEAGF 350 (560)
Q Consensus 283 sVc~i~~NEa~~L~EwIe~h~---~~Gvd~f~IyDn~StD~T~eIL~----~y~-~~G~~Vt~~~wp--~--~~~Q~~a~ 350 (560)
|++++.+||+ .|.+.++... ...--+|+|+|+||+|+|.++++ ++. +.|..|....-+ + ..++-.++
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al 80 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGM 80 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHH
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHH
Confidence 3444444443 3666665432 12234799999999999999999 332 236554333212 2 33445555
Q ss_pred HHHH----HHccCCCcEEEEecCCce-eecCCcchHHHHHHhc
Q 037991 351 AHCA----LRARDVCNWVGFIDVDEF-FRLPSGLILHDLIRNL 388 (560)
Q Consensus 351 ndCl----~r~~~~~dWVlflDaDEf-L~p~~~~sI~d~L~~~ 388 (560)
+..+ .. ..+|||+++|+|=. ..| ..|.++++..
T Consensus 81 ~~G~~~Al~~--a~gd~vv~mDADlq~~~P---~~i~~Ll~~l 118 (397)
T 2bo4_A 81 NTALRYFLEE--TQWERIHFYDADITSFGP---DWITKAEEAA 118 (397)
T ss_dssp HHHHHHHHHH--CCCSEEEECCTTCSSCCH---HHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCEEEEEcCCCCCCCH---HHHHHHHHHH
Confidence 5555 34 48899999999954 333 2355555543
No 14
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=97.03 E-value=0.0017 Score=67.47 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=69.2
Q ss_pred ceEEEEEEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCH---HHHHHHhcc-CCceEEEEeCCCcchHHHHHHH---
Q 037991 280 HEMCICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNI---ESVIDSLSS-EKFNITRHVWPWIKTQEAGFAH--- 352 (560)
Q Consensus 280 ~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T---~eIL~~y~~-~G~~Vt~~~wp~~~~Q~~a~nd--- 352 (560)
..++|++-+|||+..|.+=+....... -+|+++||+|+|++ .+++++|.+ ..-++...+-. ...-..|++.
T Consensus 53 ~klSIVVPvYNEe~~lLesVl~qi~~d-~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQk-n~gls~Ar~~~G~ 130 (391)
T 2wvl_A 53 EQTAIVVPTRNERLKLLEGVLSGIPHE-ALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQK-DPALAEALRAGGY 130 (391)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHTSCTT-SEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETT-CHHHHHHHHHTTC
T ss_pred hceEEEEeccCcHHHHHHHHHhcCCCC-ceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEecc-ChHHHHHHHhcCc
Confidence 478999999999987644443211111 37999999999999 578889964 12223222211 1111111111
Q ss_pred --------------------HHHHc-cCCCcEEEEecCCceeecCCcchHHHHHHhc--CCCCCEeEEEEEeeeeC
Q 037991 353 --------------------CALRA-RDVCNWVGFIDVDEFFRLPSGLILHDLIRNL--SGDGSVAELRISCHSFG 405 (560)
Q Consensus 353 --------------------Cl~r~-~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~--~~~~~v~ai~~~~~~fg 405 (560)
.+..+ ....+||.|+|+|.++...-......+=+.+ ... ..+.+++.|+...
T Consensus 131 ~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s-~~~MVRI~wR~kP 205 (391)
T 2wvl_A 131 PHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKT-PFAMVRILWRYKP 205 (391)
T ss_dssp CTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCS-SEEEEEEECCCCC
T ss_pred chhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCC-CcceEEEecccCc
Confidence 11111 1378999999999999542222222222211 122 3577888887754
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.02 E-value=0.0012 Score=64.73 Aligned_cols=84 Identities=13% Similarity=0.006 Sum_probs=56.7
Q ss_pred CCceEEEEEEecchHHHHHHHHHHHhh----cCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHH
Q 037991 278 KDHEMCICTMLRNQARFIREWVMYHAR----IGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHC 353 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~----~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndC 353 (560)
..+.+||+ +++|+++.|.+||++... +...+++|+||+|+|. .| .. .+.|..
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~----------~g----------~a---~a~N~G 69 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ----------FH----------GF---SWHKQM 69 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS----------CC----------TT---THHHHH
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc----------cc----------HH---HHHHHH
Confidence 34568875 459999999999995431 2225899999999872 12 12 234555
Q ss_pred HHHccCCCcEEEEecCCceeecCCcchHHHHHHh
Q 037991 354 ALRARDVCNWVGFIDVDEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 354 l~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~~ 387 (560)
+..+ ..+|++|+|.|-++.+.--..+.+.+++
T Consensus 70 i~~A--~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 70 LPRC--KGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp GGGC--CSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred HHhc--CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 5554 7899999999999854333445555544
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=96.26 E-value=0.0088 Score=63.17 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=56.6
Q ss_pred eEEEEEEecchHHHH-HHHHHHHhhcCccEEEEEECCCCcCH------HHHHHHhcc---CCceEEEEeCC---------
Q 037991 281 EMCICTMLRNQARFI-REWVMYHARIGVQRWFIYDNNSNDNI------ESVIDSLSS---EKFNITRHVWP--------- 341 (560)
Q Consensus 281 ~lsVc~i~~NEa~~L-~EwIe~h~~~Gvd~f~IyDn~StD~T------~eIL~~y~~---~G~~Vt~~~wp--------- 341 (560)
.+||++-++||+..+ .+-+.-. -...+|+++|++|+|+| .++++++.+ .+..|....-|
T Consensus 52 ~iSVVIP~yNEE~~lI~~vL~~i--~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~~~~~~ 129 (394)
T 2zu9_A 52 KMAVIVPMKNEKLHLVDGVLKAI--PHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAKAFKEV 129 (394)
T ss_dssp TEEEEEEESSCCHHHHHHHHHHS--CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHHHHHHH
T ss_pred CEEEEEecCcccHHHHHHHHHcC--CCCcEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhHHhhhc
Confidence 689999999999765 3333321 12468999999997776 677776532 35433332221
Q ss_pred -----------CcchHHHHHHHHHHHc-cCCCcEEEEecCCc
Q 037991 342 -----------WIKTQEAGFAHCALRA-RDVCNWVGFIDVDE 371 (560)
Q Consensus 342 -----------~~~~Q~~a~ndCl~r~-~~~~dWVlflDaDE 371 (560)
...++..++..|+..+ ....+||+++|+|=
T Consensus 130 g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl 171 (394)
T 2zu9_A 130 GYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN 171 (394)
T ss_dssp TCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred cccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC
Confidence 1134555555566554 23789999999999
No 17
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=95.20 E-value=0.057 Score=54.45 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=50.9
Q ss_pred CCceEEEEEEecchHHHHHHHHHHHh----hcCc-cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991 278 KDHEMCICTMLRNQARFIREWVMYHA----RIGV-QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH 352 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa~~L~EwIe~h~----~~Gv-d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd 352 (560)
....+||++.++|+++.|.++|++.. .... -+|+|+|+ ++|+.. ....+.|.
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdd-s~d~~f----------------------~~a~a~N~ 119 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQ-AGDTIF----------------------NRAKLLNV 119 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-CSSSCC----------------------CHHHHHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEe-CCCCcc----------------------chhhhhhh
Confidence 34689999999999999999999875 2222 46888887 333210 01112233
Q ss_pred HH----HHccCCCcEEEEecCCceeecC
Q 037991 353 CA----LRARDVCNWVGFIDVDEFFRLP 376 (560)
Q Consensus 353 Cl----~r~~~~~dWVlflDaDEfL~p~ 376 (560)
.+ .. ..++|++|+|+|-.+.+.
T Consensus 120 G~~~al~~--A~gd~i~flD~D~i~~~d 145 (287)
T 2fy7_A 120 GFQEALKD--YDYTCFVFSDVDLIPMND 145 (287)
T ss_dssp HHHHHHHH--SCCCEEEEECTTEEESBT
T ss_pred HHHHHHHh--CCCCEEEEECCCcccCCC
Confidence 32 33 589999999999998875
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=94.28 E-value=0.077 Score=55.07 Aligned_cols=114 Identities=12% Similarity=-0.001 Sum_probs=72.3
Q ss_pred eEEEEEEecchHHHHHHHHHHHhhcC--c--cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCc----------chH
Q 037991 281 EMCICTMLRNQARFIREWVMYHARIG--V--QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWI----------KTQ 346 (560)
Q Consensus 281 ~lsVc~i~~NEa~~L~EwIe~h~~~G--v--d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~----------~~Q 346 (560)
.++|+++++|-.+ |..+|+..+.+- . ..++|.|+++.+.+.++++.|.. .|+....+.. +.+
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~---~I~~~~~~d~~~~~~~~~N~g~~ 78 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS---AVTHIRQPDLSNIAVQPDHRKFQ 78 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG---GSEEEECSCCCCCCCCTTCGGGH
T ss_pred cccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC---ceEEEEcCCccccccchhhcCcc
Confidence 3578888999998 999999876542 3 47999999999999999999842 2333211211 110
Q ss_pred -----HHHHHHHHHHc--cCCCcEEEEecCCceeecCCcchHHHHHHhcCCCCCEeEEE
Q 037991 347 -----EAGFAHCALRA--RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLSGDGSVAELR 398 (560)
Q Consensus 347 -----~~a~ndCl~r~--~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~~~~~v~ai~ 398 (560)
...+..++.+. ...++.++++|-|=.+.|.--.-..+++..++.++++.+++
T Consensus 79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~IS 137 (343)
T 1fo8_A 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVS 137 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEE
T ss_pred cchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 01223343332 23799999999999988753333444444333344666554
No 19
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=82.67 E-value=3.5 Score=35.58 Aligned_cols=52 Identities=13% Similarity=0.399 Sum_probs=42.9
Q ss_pred EEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEE
Q 037991 286 TMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITR 337 (560)
Q Consensus 286 ~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~ 337 (560)
+.+-+...||.+||+-.+.-|++-|++|.|..+|.-.+--+++...|..|..
T Consensus 83 ivttddkewikdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdvrt 134 (162)
T 2l82_A 83 IVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRT 134 (162)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEE
T ss_pred EEecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeee
Confidence 4556888899999999888999999999987777777777888888876643
No 20
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=70.94 E-value=20 Score=34.85 Aligned_cols=88 Identities=10% Similarity=0.065 Sum_probs=47.8
Q ss_pred HHHHHHH-HHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHcc-CCCcEEEEecCC
Q 037991 293 RFIREWV-MYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRAR-DVCNWVGFIDVD 370 (560)
Q Consensus 293 ~~L~EwI-e~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~-~~~dWVlflDaD 370 (560)
..|...+ +..+..|+++|+|..+ .+...++++.+ |..+....-....+. .++..++.... ...+|++.+++|
T Consensus 27 Pli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~~---g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD 100 (253)
T 4fcu_A 27 PMILRVVDQAKKVEGFDDLCVATD--DERIAEICRAE---GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGD 100 (253)
T ss_dssp EHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHTT---TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTT
T ss_pred EhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHHc---CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCC
Confidence 3455555 5544458999999875 35555555544 765543211112222 13344444432 257999999999
Q ss_pred ceeecCCcchHHHHHHhc
Q 037991 371 EFFRLPSGLILHDLIRNL 388 (560)
Q Consensus 371 EfL~p~~~~sI~d~L~~~ 388 (560)
+=+..+ ..|.++++.+
T Consensus 101 ~Pli~~--~~i~~li~~~ 116 (253)
T 4fcu_A 101 EPLLPA--QLVQQVAKLL 116 (253)
T ss_dssp CTTCCH--HHHHHHHHHH
T ss_pred cccCCH--HHHHHHHHHH
Confidence 944321 3455555443
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=67.52 E-value=21 Score=34.88 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHcc-CCCcEEEEecCCce
Q 037991 294 FIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRAR-DVCNWVGFIDVDEF 372 (560)
Q Consensus 294 ~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~-~~~dWVlflDaDEf 372 (560)
.|...++.....|+++|+|..+ ++...+.++.+ |..+....-....+.. ....++.... ...++++++++|+-
T Consensus 36 li~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~~---g~~v~~~~~~~~~Gt~-~i~~a~~~l~~~~~d~vlv~~gD~P 109 (256)
T 3tqd_A 36 MIQHVYESAIKSGAEEVVIATD--DKRIRQVAEDF---GAVVCMTSSDHQSGTE-RIAEAAVALGFEDDEIIVCLQGDEP 109 (256)
T ss_dssp HHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCTTCCSHHH-HHHHHHHHTTCCTTCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHHc---CCeEEEeCCCCCCcHH-HHHHHHHHhCcCCCCEEEEEeCCcc
Confidence 4544555555568999998864 35555566555 7655432211122222 1233433321 26799999999995
Q ss_pred eecCCcchHHHHHHhc
Q 037991 373 FRLPSGLILHDLIRNL 388 (560)
Q Consensus 373 L~p~~~~sI~d~L~~~ 388 (560)
+..+ ..|.++++..
T Consensus 110 li~~--~~i~~li~~~ 123 (256)
T 3tqd_A 110 LIPP--DAIRKLAEDL 123 (256)
T ss_dssp CCCH--HHHHHHHHHH
T ss_pred cCCH--HHHHHHHHHH
Confidence 5432 3455555544
No 22
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=64.72 E-value=34 Score=32.84 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHcc-CCCcEEEEecCCc
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRAR-DVCNWVGFIDVDE 371 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~-~~~dWVlflDaDE 371 (560)
..|...++..+..|+++|+|..+ .+...+.++.+ |..+....-....+... ...++.... ...++++++++|+
T Consensus 28 Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~~---g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~ 101 (252)
T 3oam_A 28 PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQAF---GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDE 101 (252)
T ss_dssp EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTC
T ss_pred EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHHc---CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCe
Confidence 35555566555668999998874 35555555554 76554322111112111 223333221 2579999999999
Q ss_pred eeecCCcchHHHHHHhc
Q 037991 372 FFRLPSGLILHDLIRNL 388 (560)
Q Consensus 372 fL~p~~~~sI~d~L~~~ 388 (560)
-+... ..|.++++.+
T Consensus 102 Pli~~--~~i~~l~~~~ 116 (252)
T 3oam_A 102 PLIPP--AIIRQVADNL 116 (252)
T ss_dssp TTCCH--HHHHHHHHHH
T ss_pred eecCH--HHHHHHHHHH
Confidence 44321 3455555443
No 23
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=63.78 E-value=28 Score=34.06 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEE--eCCCcchHHHHHHHHHHHcc-CCCcEEEEecCC
Q 037991 294 FIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRH--VWPWIKTQEAGFAHCALRAR-DVCNWVGFIDVD 370 (560)
Q Consensus 294 ~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~--~wp~~~~Q~~a~ndCl~r~~-~~~dWVlflDaD 370 (560)
.|...++.....|+++|+|..+ .+...++++.+ |..+... +++. +... +..++.... ...++++++++|
T Consensus 45 mi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~~---g~~v~~~~~~~~~--Gt~~-i~~~~~~l~~~~~d~vlv~~gD 116 (264)
T 3k8d_A 45 MIVHVLERARESGAERIIVATD--HEDVARAVEAA---GGEVCMTRADHQS--GTER-LAEVVEKCAFSDDTVIVNVQGD 116 (264)
T ss_dssp HHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCTTCCS--HHHH-HHHHHHHHTCCTTCEEEEECTT
T ss_pred HHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHHc---CCEEEEecCCCCC--CHHH-HHHHHHHhccCCCCEEEEEcCC
Confidence 4544555555568999998774 45556666655 7655432 2332 2111 222222211 367999999999
Q ss_pred ceeecCCcchHHHHHHhc
Q 037991 371 EFFRLPSGLILHDLIRNL 388 (560)
Q Consensus 371 EfL~p~~~~sI~d~L~~~ 388 (560)
+-+.. ...|.++++..
T Consensus 117 ~Pli~--~~~i~~li~~~ 132 (264)
T 3k8d_A 117 EPMIP--ATIIRQVADNL 132 (264)
T ss_dssp CTTCC--HHHHHHHHHHH
T ss_pred cccCC--HHHHHHHHHHH
Confidence 95543 23466665554
No 24
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=54.33 E-value=29 Score=34.82 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=47.0
Q ss_pred CCCceEEEEEEecchHHHHHHHHHHHh----hcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHH
Q 037991 277 EKDHEMCICTMLRNQARFIREWVMYHA----RIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAH 352 (560)
Q Consensus 277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~----~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~nd 352 (560)
..++++||++-++|.++.|..||.|.. .+.+++-+++.+.+++. +..++. .+|-
T Consensus 48 ~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~~~~--------------------~FNRa~--LlNv 105 (287)
T 3lw6_A 48 ASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRF--------------------RFNRAS--LINV 105 (287)
T ss_dssp CCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSS--------------------CCCHHH--HHHH
T ss_pred CCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCC--------------------ccchhh--eecc
Confidence 356899999999999999988887643 34665444333433221 222221 2333
Q ss_pred HHHHccCCCcEEEEecCCcee
Q 037991 353 CALRARDVCNWVGFIDVDEFF 373 (560)
Q Consensus 353 Cl~r~~~~~dWVlflDaDEfL 373 (560)
....+....|+++|-|+|=.-
T Consensus 106 Gf~ea~~~~d~~ifHDVDLlP 126 (287)
T 3lw6_A 106 GFQFASDVYDYIAMHDVDLLP 126 (287)
T ss_dssp HHHHSCTTCCEEEEECTTEEE
T ss_pred cHHHHhccCCEEEEecccccc
Confidence 344445678999999999543
No 25
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=45.32 E-value=1.1e+02 Score=28.34 Aligned_cols=90 Identities=8% Similarity=0.063 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhcC-ccEEEEEECCCCcCHHHHHHHhccCCceEEEEe--CC-CcchHHHHHHHHHHHccCCCcEEEEec
Q 037991 293 RFIREWVMYHARIG-VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHV--WP-WIKTQEAGFAHCALRARDVCNWVGFID 368 (560)
Q Consensus 293 ~~L~EwIe~h~~~G-vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~--wp-~~~~Q~~a~ndCl~r~~~~~dWVlflD 368 (560)
..|...|+..+..| +++|+|..+ .+...++++.+ |..+...+ +. +......++..++.......+++++++
T Consensus 30 pll~~~l~~~~~~~~~~~ivvv~~--~~~i~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~ 104 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFDRIIVSTD--GGLIAEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQ 104 (228)
T ss_dssp EHHHHHHHHHHHHCCCSEEEEEES--CHHHHHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred CHHHHHHHHHHhCCCCCEEEEECC--CHHHHHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEc
Confidence 44545555555556 799999885 34445555555 65442221 11 222233334444433323579999999
Q ss_pred CCceeecCCcchHHHHHHhcC
Q 037991 369 VDEFFRLPSGLILHDLIRNLS 389 (560)
Q Consensus 369 aDEfL~p~~~~sI~d~L~~~~ 389 (560)
+|--+.. ...|.++++...
T Consensus 105 ~D~P~~~--~~~i~~l~~~~~ 123 (228)
T 1ezi_A 105 PTSPLRT--GAHIREAFSLFD 123 (228)
T ss_dssp TTCTTCC--HHHHHHHHTTCC
T ss_pred CCCCcCC--HHHHHHHHHHHH
Confidence 9985542 245777777654
No 26
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=44.37 E-value=24 Score=31.76 Aligned_cols=89 Identities=7% Similarity=-0.011 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCCcEEEEecCCce
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEF 372 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dWVlflDaDEf 372 (560)
..|...|+-....|+++++|+.+... .++.+.+.+.|..+....-+ ......++..++.......+|++++++|--
T Consensus 32 pli~~~l~~l~~~~~~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~-~~g~~~~i~~al~~~~~~~~~vlv~~~D~P 107 (199)
T 2waw_A 32 TLLGATLAMARRCPFDQLIVTLGGAA---DEVLEKVELDGLDIVLVDDA-GLGCSSSLKSALTWVDPTAEGIVLMLGDQP 107 (199)
T ss_dssp EHHHHHHHHHHTSSCSEEEEEECTTH---HHHHHHSCCTTSEEEECCCC-CTTCCCHHHHHHHTSCTTCSEEEEEETTCT
T ss_pred CHHHHHHHHHHhCCCCcEEEEeCCCH---HHHHHHhccCCCEEEECCCc-ccCHHHHHHHHHHhhhccCCeEEEEeCCcc
Confidence 45555566555567899999876432 34444443346654332211 112222344444332225799999999976
Q ss_pred eecCCcchHHHHHHh
Q 037991 373 FRLPSGLILHDLIRN 387 (560)
Q Consensus 373 L~p~~~~sI~d~L~~ 387 (560)
+.. ...|.++++.
T Consensus 108 ~~~--~~~i~~l~~~ 120 (199)
T 2waw_A 108 GIT--ASAVASLIAG 120 (199)
T ss_dssp TCC--HHHHHHHHHH
T ss_pred cCC--HHHHHHHHhh
Confidence 543 2456666665
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=43.07 E-value=1.2e+02 Score=28.30 Aligned_cols=86 Identities=6% Similarity=0.012 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhcCc-cEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCCcEEEEecCCc
Q 037991 293 RFIREWVMYHARIGV-QRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDE 371 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gv-d~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dWVlflDaDE 371 (560)
..|...|+.....|. ++|+|..+. +...+.++.+ |..+...+-++..++.. ...++... ..++++++++|-
T Consensus 28 pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~---~~~~~~~~~~~~~g~~~-~~~~~~~~--~~~~~lv~~~D~ 99 (245)
T 1h7e_A 28 PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF---GGKAIMTRNDHESGTDR-LVEVMHKV--EADIYINLQGDE 99 (245)
T ss_dssp EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT---TCEEEECCSCCSSHHHH-HHHHHHHS--CCSEEEECCTTC
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc---CCeEEeCCCccCCcHHH-HHHHHHhC--CCCEEEEEcCCc
Confidence 455555666666676 999998763 4455555554 66543321122233432 22344433 578999999998
Q ss_pred eeecCCcchHHHHHHhc
Q 037991 372 FFRLPSGLILHDLIRNL 388 (560)
Q Consensus 372 fL~p~~~~sI~d~L~~~ 388 (560)
-+.. ...|.++++..
T Consensus 100 P~~~--~~~i~~l~~~~ 114 (245)
T 1h7e_A 100 PMIR--PRDVETLLQGM 114 (245)
T ss_dssp TTCC--HHHHHHHHHHH
T ss_pred CcCC--HHHHHHHHHHH
Confidence 5542 23455665543
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=36.74 E-value=1.2e+02 Score=28.82 Aligned_cols=85 Identities=18% Similarity=0.136 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEE--eCCCcchHHHHHHHHHHHcc-CCCcEEEEecC
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRH--VWPWIKTQEAGFAHCALRAR-DVCNWVGFIDV 369 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~--~wp~~~~Q~~a~ndCl~r~~-~~~dWVlflDa 369 (560)
..|...|+.....|+++|+|..+ .+...++++.+ |..+... .++. .+. ....++.... ...++++++++
T Consensus 28 pli~~~l~~l~~~~~~~ivvv~~--~~~i~~~~~~~---~~~~~~~~~~~~~--g~~-~~~~~~~~l~~~~~~~vlv~~~ 99 (262)
T 1vic_A 28 PMIQHVFEKALQSGASRVIIATD--NENVADVAKSF---GAEVCMTSVNHNS--GTE-RLAEVVEKLAIPDNEIIVNIQG 99 (262)
T ss_dssp EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCCSSCC--HHH-HHHHHHHHTTCCTTCEEEECCT
T ss_pred EHHHHHHHHHHhCCCceEEEECC--cHHHHHHHHhc---CCEEEECCccccC--ChH-HHHHHHHHhccCCCCEEEEEeC
Confidence 45555566655668899998875 24455555554 6655332 2332 221 1122222111 25799999999
Q ss_pred CceeecCCcchHHHHHHh
Q 037991 370 DEFFRLPSGLILHDLIRN 387 (560)
Q Consensus 370 DEfL~p~~~~sI~d~L~~ 387 (560)
|--+.. ...|.++++.
T Consensus 100 D~P~i~--~~~i~~l~~~ 115 (262)
T 1vic_A 100 DEPLIP--PVIVRQVADN 115 (262)
T ss_dssp TCTTCC--HHHHHHHHHH
T ss_pred CcCccC--HHHHHHHHHH
Confidence 985432 2345555554
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=36.49 E-value=38 Score=30.42 Aligned_cols=89 Identities=8% Similarity=-0.020 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCCcEEEEecCCce
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEF 372 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dWVlflDaDEf 372 (560)
..|...++.....|+++++|+.+.. ..++.+.+.+.|..+...+- +......++..++.......++++++++|--
T Consensus 32 pll~~~l~~l~~~~~~~i~vv~~~~---~~~~~~~~~~~~~~~~~~~~-~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P 107 (197)
T 2wee_A 32 TVLGATLDVARQAGFDQLILTLGGA---ASAVRAAMALDGTDVVVVED-VERGCAASLRVALARVHPRATGIVLMLGDQP 107 (197)
T ss_dssp EHHHHHHHHHHHTTCSEEEEEECTT---HHHHHHHSCCTTSEEEECC-----CCHHHHHHHHTTSCTTEEEEEEEETTCT
T ss_pred cHHHHHHHHHHhcCCCcEEEEeCCC---HHHHHHHhccCCCEEEECCC-cccCHHHHHHHHHHHhcccCCeEEEEeCCcC
Confidence 4555556655556889999987643 23444444334654433211 1112333444443322224699999999984
Q ss_pred eecCCcchHHHHHHh
Q 037991 373 FRLPSGLILHDLIRN 387 (560)
Q Consensus 373 L~p~~~~sI~d~L~~ 387 (560)
+.. ...|.++++.
T Consensus 108 ~~~--~~~i~~l~~~ 120 (197)
T 2wee_A 108 QVA--PATLRRIIDV 120 (197)
T ss_dssp TCC--HHHHHHHHHH
T ss_pred CCC--HHHHHHHHhh
Confidence 432 2356666665
No 30
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=36.02 E-value=1.4e+02 Score=28.48 Aligned_cols=88 Identities=14% Similarity=0.082 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhcc---CCceEEEEeCCCcchHHHHHHHHHHHccCCCcEEEEecC
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSS---EKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDV 369 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~---~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dWVlflDa 369 (560)
..|...|+.....|+++|+|..+.. ...++.+.+.+ .|..+....-+...+...++..++... ..++++++.+
T Consensus 56 pli~~~l~~l~~~g~~~iivv~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~--~~~~~lv~~~ 131 (269)
T 4ecm_A 56 PMIYHAVYKLKQCDITDIMIITGKE--HMGDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFV--GNDRMVVILG 131 (269)
T ss_dssp EHHHHHHHHHHHTTCCEEEEEECTT--THHHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHH--TTSEEEEEET
T ss_pred EHHHHHHHHHHHCCCCEEEEECChh--hHHHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhc--CCCcEEEEeC
Confidence 3454555555567899999988632 23344444321 244443332222223333333333222 2689999999
Q ss_pred CceeecCCcchHHHHHHhc
Q 037991 370 DEFFRLPSGLILHDLIRNL 388 (560)
Q Consensus 370 DEfL~p~~~~sI~d~L~~~ 388 (560)
|..+. ..+.++++..
T Consensus 132 D~~~~----~~l~~l~~~~ 146 (269)
T 4ecm_A 132 DNIFS----DDIRPYVEEF 146 (269)
T ss_dssp TEEES----SCSHHHHHHH
T ss_pred CccCc----cCHHHHHHHH
Confidence 99664 2455555543
No 31
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=35.62 E-value=1.4e+02 Score=27.68 Aligned_cols=87 Identities=15% Similarity=0.110 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcC-ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeC---CC-cchHHHHHHHHHHHccCCCcEEEEe
Q 037991 293 RFIREWVMYHARIG-VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVW---PW-IKTQEAGFAHCALRARDVCNWVGFI 367 (560)
Q Consensus 293 ~~L~EwIe~h~~~G-vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~w---p~-~~~Q~~a~ndCl~r~~~~~dWVlfl 367 (560)
..|...|+..+..| +++|+|..+ .+...++++.+ |..+...+. .+ ...+ .++.+++... ...++++.+
T Consensus 29 pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~~---g~~~~~~~~~~~~~~~~~~-~~v~~al~~~-~~~d~vlv~ 101 (229)
T 1qwj_A 29 PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQF---GAQVHRRSSETSKDSSTSL-DAIVEFLNYH-NEVDIVGNI 101 (229)
T ss_dssp EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHHT---TCEEEECCGGGSSTTCCHH-HHHHHHHTTC-TTCSEEEEE
T ss_pred EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHHc---CCEEEeChhhhcCCCCcHH-HHHHHHHHhc-CCCCEEEEe
Confidence 34544555555567 599998874 45555666555 765533221 11 1222 2334443332 357999999
Q ss_pred cCCceeecCCcchHHHHHHhc
Q 037991 368 DVDEFFRLPSGLILHDLIRNL 388 (560)
Q Consensus 368 DaDEfL~p~~~~sI~d~L~~~ 388 (560)
++|.-+... ..|.++++..
T Consensus 102 ~~D~Pli~~--~~i~~l~~~~ 120 (229)
T 1qwj_A 102 QATSPCLHP--TDLQKVAEMI 120 (229)
T ss_dssp CTTCTTCCH--HHHHHHHHHH
T ss_pred cCCCCcCCH--HHHHHHHHHH
Confidence 999865432 4566666654
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=25.56 E-value=69 Score=29.55 Aligned_cols=88 Identities=10% Similarity=0.045 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhc-CccEEEEEECCCC-cCHHHHHHHhccCC--c--eEEEEeCCCcchHHHHHHHHHHHcc---C--CC
Q 037991 293 RFIREWVMYHARI-GVQRWFIYDNNSN-DNIESVIDSLSSEK--F--NITRHVWPWIKTQEAGFAHCALRAR---D--VC 361 (560)
Q Consensus 293 ~~L~EwIe~h~~~-Gvd~f~IyDn~St-D~T~eIL~~y~~~G--~--~Vt~~~wp~~~~Q~~a~ndCl~r~~---~--~~ 361 (560)
..|...|+..... |+++|+|..+... +...++++.+ | . .+... ++......++..++.... . ..
T Consensus 32 pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~~~~~~~~ 106 (236)
T 2vsh_A 32 PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKY---LPLYKERIIIT--KGGADRNTSIKNIIEAIDAYRPLTPE 106 (236)
T ss_dssp EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHH---CGGGGGGEEEE--ECCSSHHHHHHHHHHHHHHHSCCCTT
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhc---cccccCceEEE--CCCCchHHHHHHHHHHHHhhccCCCC
Confidence 4555556655444 5899999877443 3355566555 4 1 11111 222223333344433321 2 45
Q ss_pred cEEEEecCCc-eeecCCcchHHHHHHhc
Q 037991 362 NWVGFIDVDE-FFRLPSGLILHDLIRNL 388 (560)
Q Consensus 362 dWVlflDaDE-fL~p~~~~sI~d~L~~~ 388 (560)
++++++++|- ++.+ ..|.++++..
T Consensus 107 ~~vlv~~~D~P~~~~---~~i~~l~~~~ 131 (236)
T 2vsh_A 107 DIVVTHDSVRPFITL---RMIQDNIQLA 131 (236)
T ss_dssp CEEEEEETTCTTCCH---HHHHHHHHHH
T ss_pred CEEEEecCCcccCCH---HHHHHHHHHH
Confidence 8999999998 5543 3466666554
No 33
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.42 E-value=1.2e+02 Score=25.32 Aligned_cols=60 Identities=15% Similarity=0.334 Sum_probs=39.0
Q ss_pred CCceEEEEEEecchHHHHHHHHHHHhhcCccEE-EEEECCCCcCHHHHHHHhccCCceEEEE
Q 037991 278 KDHEMCICTMLRNQARFIREWVMYHARIGVQRW-FIYDNNSNDNIESVIDSLSSEKFNITRH 338 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f-~IyDn~StD~T~eIL~~y~~~G~~Vt~~ 338 (560)
+++.-.+++.+.+...|-+.-|.+.+.+|++-. +|||. ......+.-++..+.|..|...
T Consensus 47 kkynativvvvvddkewaekairfvkslgaqvliiiydq-dqnrleefsrevrrrgfevrtv 107 (134)
T 2l69_A 47 KKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQ-DQNRLEEFSREVRRRGFEVRTV 107 (134)
T ss_dssp TCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECS-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeC-chhHHHHHHHHHHhcCceEEEe
Confidence 344556666778888888888888888999654 55654 2333445555555667766444
No 34
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=23.81 E-value=1.5e+02 Score=27.82 Aligned_cols=92 Identities=12% Similarity=-0.053 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhcC-ccEEEEEECCCC-cCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHcc-----CCCcEEE
Q 037991 293 RFIREWVMYHARIG-VQRWFIYDNNSN-DNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRAR-----DVCNWVG 365 (560)
Q Consensus 293 ~~L~EwIe~h~~~G-vd~f~IyDn~St-D~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~-----~~~dWVl 365 (560)
..|...|+-....| +++|+|+.+... +...++++.|...+. +.... +...+..+...++.... ...+||+
T Consensus 33 pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~sv~~al~~l~~~~~~~~~~~vl 109 (246)
T 3f1c_A 33 PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDDR-IVVIE--GGEDRNETIMNGIRFVEKTYGLTDDDIIV 109 (246)
T ss_dssp EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCCTT-EEEEE--CCSSHHHHHHHHHHHHHHHTCCCTTCEEE
T ss_pred eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCCCC-EEEEC--CCCchHHHHHHHHHHHhhhhcCCCCCEEE
Confidence 45555555554556 899998876432 234567777642222 33322 22233333333333221 1479999
Q ss_pred EecCCceeecCCcchHHHHHHhcC
Q 037991 366 FIDVDEFFRLPSGLILHDLIRNLS 389 (560)
Q Consensus 366 flDaDEfL~p~~~~sI~d~L~~~~ 389 (560)
++|+|-=+.. ...|.++++...
T Consensus 110 v~~~d~Pli~--~~~i~~li~~~~ 131 (246)
T 3f1c_A 110 THDAVRPFLT--HRIIEENIDAAL 131 (246)
T ss_dssp EEETTCTTCC--HHHHHHHHHHHH
T ss_pred EecCcccCCC--HHHHHHHHHHHH
Confidence 9999974442 234666666543
No 35
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=21.49 E-value=2.4e+02 Score=28.77 Aligned_cols=90 Identities=9% Similarity=-0.003 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCCcEEEEecCCce
Q 037991 293 RFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNWVGFIDVDEF 372 (560)
Q Consensus 293 ~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dWVlflDaDEf 372 (560)
..|...|+.....|+++++|..+...+ ++.+.+.+.+..+... +.......++..++... ...++++++++|--
T Consensus 37 pli~~~l~~l~~~~~~~i~vv~~~~~~---~i~~~~~~~~~~~v~~--~~~~g~~~~i~~~~~~~-~~~~~~lv~~~D~P 110 (459)
T 4fce_A 37 PMVQHVIDAAMKLGAQHVHLVYGHGGE---LLKKTLADPSLNWVLQ--AEQLGTGHAMQQAAPHF-ADDEDILMLYGDVP 110 (459)
T ss_dssp EHHHHHHHHHHHHTCSCEEEEESSCHH---HHHHHC-----CEEEC--SSCCCHHHHHHHHGGGS-CTTSEEEEEETTCT
T ss_pred eHHHHHHHHHHhCCCCcEEEEeCCCHH---HHHHHhccCCcEEEeC--CCCCCcHHHHHHHHHhc-CCCCcEEEEeCCcc
Confidence 455555665556689999998874433 3333333224333322 22223333334443322 34689999999984
Q ss_pred eecCCcchHHHHHHhcCC
Q 037991 373 FRLPSGLILHDLIRNLSG 390 (560)
Q Consensus 373 L~p~~~~sI~d~L~~~~~ 390 (560)
+.. ...|.++++...+
T Consensus 111 ~i~--~~~i~~l~~~~~~ 126 (459)
T 4fce_A 111 LIS--VDTLQRLLAAKPE 126 (459)
T ss_dssp TCC--HHHHHHHHHHCCT
T ss_pred cCC--HHHHHHHHHHHhh
Confidence 332 2457888877654
No 36
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=21.38 E-value=3e+02 Score=27.49 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=59.5
Q ss_pred CCceEEEEEEecchHHHHHHHHHHHhh-cCccEEEEEECCCCc-CHHHHHHHhccCCceEEEEeCCCcc-hHHHHHHHHH
Q 037991 278 KDHEMCICTMLRNQARFIREWVMYHAR-IGVQRWFIYDNNSND-NIESVIDSLSSEKFNITRHVWPWIK-TQEAGFAHCA 354 (560)
Q Consensus 278 ~~~~lsVc~i~~NEa~~L~EwIe~h~~-~Gvd~f~IyDn~StD-~T~eIL~~y~~~G~~Vt~~~wp~~~-~Q~~a~ndCl 354 (560)
+.-.++|++++++....|.+-|+++.. .++++|+|+=|+..+ ........+...+..|....-+... .++ ..
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnR-----F~ 100 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNR-----LQ 100 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGG-----GS
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhc-----cC
Confidence 345788888999999999999987653 478999888776542 2333444543223334443222110 000 01
Q ss_pred HHccCCCcEEEEecCCceeecCCcchHHHHHH
Q 037991 355 LRARDVCNWVGFIDVDEFFRLPSGLILHDLIR 386 (560)
Q Consensus 355 ~r~~~~~dWVlflDaDEfL~p~~~~sI~d~L~ 386 (560)
-...-..+.|+.+|-|=.+.. ++|.-..+
T Consensus 101 p~~~i~T~AVLslDDDv~l~~---~el~faF~ 129 (293)
T 1omz_A 101 VFPEVETNAVLMVDDDTLISA---QDLVFAFS 129 (293)
T ss_dssp CCTTCCSSEEEEECTTEEECH---HHHHHHHH
T ss_pred CCccCCcCEEEEEcCCCCCCH---HHHHHHHH
Confidence 111358999999999965443 34543333
No 37
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.29 E-value=3.9e+02 Score=22.84 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=61.2
Q ss_pred EEEEecchHHHHHHHHHHHhhcCccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccCCCcE
Q 037991 284 ICTMLRNQARFIREWVMYHARIGVQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARDVCNW 363 (560)
Q Consensus 284 Vc~i~~NEa~~L~EwIe~h~~~Gvd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~~~dW 363 (560)
+.+.+-..+..|.|-+.-.+.+|+.-+.+|.+.....-++-|+++.+.|..|.... ....-...+.....++ ..-+-
T Consensus 4 ifvvfssdpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtve--dkedfrenireiwery-pqldv 80 (162)
T 2l82_A 4 IFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVE--DKEDFRENIREIWERY-PQLDV 80 (162)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECC--SHHHHHHHHHHHHHHC-TTCCE
T ss_pred EEEEecCCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeec--cHHHHHHHHHHHHHhC-CCCcE
Confidence 34455677888899988888899998888977555566789999999997664332 1111112233334454 34444
Q ss_pred EEEecCCceeecCCcchHHHHHHhcCC
Q 037991 364 VGFIDVDEFFRLPSGLILHDLIRNLSG 390 (560)
Q Consensus 364 VlflDaDEfL~p~~~~sI~d~L~~~~~ 390 (560)
|..+-.|+ ..-|.+|+.+...
T Consensus 81 vvivttdd------kewikdfieeake 101 (162)
T 2l82_A 81 VVIVTTDD------KEWIKDFIEEAKE 101 (162)
T ss_dssp EEEEECCC------HHHHHHHHHHHHH
T ss_pred EEEEecCc------HHHHHHHHHHHHh
Confidence 44433332 2338888887644
No 38
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=21.17 E-value=2.6e+02 Score=27.31 Aligned_cols=91 Identities=13% Similarity=0.213 Sum_probs=47.4
Q ss_pred eEEEEEE-ecchHHHHHHHHHH---HhhcCcc---EEEEEECCCCcCHHHHHHHhccCCceEEEE-----eCCCcchH-H
Q 037991 281 EMCICTM-LRNQARFIREWVMY---HARIGVQ---RWFIYDNNSNDNIESVIDSLSSEKFNITRH-----VWPWIKTQ-E 347 (560)
Q Consensus 281 ~lsVc~i-~~NEa~~L~EwIe~---h~~~Gvd---~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~-----~wp~~~~Q-~ 347 (560)
+|++.++ ++.-..+|..|+++ |...|.. ++||+.++...-. ..+.+. |... .||...-+ .
T Consensus 2 tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp------~~~~~~-v~~~~~~~~~Wqd~sm~Rm 74 (246)
T 4ayl_A 2 RIGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYD------EENNKH-IHRIKQKNLGWPDNTLKRF 74 (246)
T ss_dssp EEEEEEECCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTT------TTTCTT-EEEEECCCCCTTHHHHTHH
T ss_pred eEEEEEEEeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCC------cCCCce-EEEEeCCcCCCcccchHHH
Confidence 4554443 34445788888886 4456776 4555554332210 111232 3222 24442221 1
Q ss_pred HHHHHHHHHccCCCcEEEEecCCceeecCCc
Q 037991 348 AGFAHCALRARDVCNWVGFIDVDEFFRLPSG 378 (560)
Q Consensus 348 ~a~ndCl~r~~~~~dWVlflDaDEfL~p~~~ 378 (560)
..+.+...+.+.+.|++.++|+|-.+.-.-+
T Consensus 75 ~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG 105 (246)
T 4ayl_A 75 HIFLRIKEQLERETDYLFFFNANLLFTSPIG 105 (246)
T ss_dssp HHHHTTHHHHHHHCSEEEEECTTEEECSCBC
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCceeeccCC
Confidence 2233333333457999999999988775544
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=20.74 E-value=3.5e+02 Score=24.48 Aligned_cols=92 Identities=7% Similarity=-0.059 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhhcC-ccEEEEEECCCCcCHHHHHHHhccCCceEEEEeCCCcchHHHHHHHHHHHccC-----CCcEEE
Q 037991 292 ARFIREWVMYHARIG-VQRWFIYDNNSNDNIESVIDSLSSEKFNITRHVWPWIKTQEAGFAHCALRARD-----VCNWVG 365 (560)
Q Consensus 292 a~~L~EwIe~h~~~G-vd~f~IyDn~StD~T~eIL~~y~~~G~~Vt~~~wp~~~~Q~~a~ndCl~r~~~-----~~dWVl 365 (560)
...|...|+.....+ +++|+|..+...+...+ +..+.. ..+.... ++.+ ...+...++..... ..++++
T Consensus 34 kpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~--~~i~~~~-~~~~-~~~si~~~l~~~~~~~~~~~~~~vl 108 (231)
T 1vgw_A 34 KTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP--QVRVWKN-GGQT-RAETVRNGVAKLLETGLAAETDNIL 108 (231)
T ss_dssp EEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT--TSEEECC-CCSS-HHHHHHHHHHHHHHHSSSCTTSEEE
T ss_pred eEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC--CceEEEc-CCCc-HHHHHHHHHHHHhhhccCCCCCEEE
Confidence 345555566554444 89999987755555656 555421 1243322 2222 33333333322211 479999
Q ss_pred EecCCceeecCCcchHHHHHHhcCC
Q 037991 366 FIDVDEFFRLPSGLILHDLIRNLSG 390 (560)
Q Consensus 366 flDaDEfL~p~~~~sI~d~L~~~~~ 390 (560)
++++|--+.. ...|.++++....
T Consensus 109 v~~~D~p~~~--~~~i~~l~~~~~~ 131 (231)
T 1vgw_A 109 VHDAARCCLP--SEALARLIEQAGN 131 (231)
T ss_dssp ECCTTCTTCC--HHHHHHHHHHHTT
T ss_pred EEcCCcccCC--HHHHHHHHHHHhh
Confidence 9999985543 2457777766543
No 40
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=20.36 E-value=3.8e+02 Score=27.51 Aligned_cols=110 Identities=9% Similarity=0.057 Sum_probs=64.3
Q ss_pred CCCceEEEEEEecchHHHHHHHHHHHhhcCccEEEEE-ECCCCcCHHHHHHHhccCCceEEEE------eCCCcchHHHH
Q 037991 277 EKDHEMCICTMLRNQARFIREWVMYHARIGVQRWFIY-DNNSNDNIESVIDSLSSEKFNITRH------VWPWIKTQEAG 349 (560)
Q Consensus 277 ~~~~~lsVc~i~~NEa~~L~EwIe~h~~~Gvd~f~Iy-Dn~StD~T~eIL~~y~~~G~~Vt~~------~wp~~~~Q~~a 349 (560)
+.++++|...++.++...|+..+..... .-..++|. |..+.+...+.++...+.-.+|... .|-+ ..+..|
T Consensus 81 e~~~kiAflil~h~d~~~l~rll~~ly~-p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg-~S~v~A 158 (391)
T 2gak_A 81 EVGFPIAYSIVVHHKIEMLDRLLRAIYM-PQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYAS-WTRVKA 158 (391)
T ss_dssp HHTSCEEEEEEECSCHHHHHHHHHHHCC-TTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTS-HHHHHH
T ss_pred ccCCCEEEEEEecCCHHHHHHHHHHHhC-CCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCC-chHHHH
Confidence 4557899998888888888888875432 23345554 5555554443333222111124332 2322 234444
Q ss_pred HHHHHHHc---cCCCcEEEEecCCceeecCCcchHHHHHHhcC
Q 037991 350 FAHCALRA---RDVCNWVGFIDVDEFFRLPSGLILHDLIRNLS 389 (560)
Q Consensus 350 ~ndCl~r~---~~~~dWVlflDaDEfL~p~~~~sI~d~L~~~~ 389 (560)
.-.|+..+ ....+|++.|-...+-.- ....|.++|....
T Consensus 159 ~l~ll~~aL~~~~~w~yfilLSgsD~PLk-t~~~i~~~l~~~~ 200 (391)
T 2gak_A 159 DLNCMKDLYRMNANWKYLINLCGMDFPIK-TNLEIVRKLKCST 200 (391)
T ss_dssp HHHHHHHHHHHCSCCCEEEEEETTCEESS-CHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCEEEEecCCCcccc-CHHHHHHHHHhcC
Confidence 44444332 247899999999988653 3456888888753
Done!