Query 037992
Match_columns 129
No_of_seqs 115 out of 672
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 10:38:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 1E-56 3.4E-61 352.9 9.6 125 3-129 98-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 4.2E-52 1.5E-56 323.5 4.7 115 4-129 91-206 (206)
3 1aun_A PR-5D; antifungal prote 100.0 3.3E-51 1.1E-55 318.9 7.8 114 4-129 92-206 (208)
4 1z3q_A Thaumatin-like protein; 100.0 4.6E-51 1.6E-55 316.4 7.5 112 3-129 89-200 (200)
5 2vhk_A Thaumatin-I; kinetics o 100.0 9.4E-50 3.2E-54 310.3 7.7 108 7-129 98-205 (206)
6 3g7m_A Xylanase inhibitor TL-X 99.7 2.6E-17 8.7E-22 122.5 5.7 57 4-129 93-151 (151)
7 4aor_D Trypsin inhibitor 3; hy 79.2 0.49 1.7E-05 26.5 0.4 14 67-80 11-24 (37)
8 3gd0_A Laminaripentaose-produc 74.8 2.7 9.3E-05 34.7 3.9 40 90-129 321-365 (367)
9 1oig_A Dumpy, CG33196-PB; stru 23.0 33 0.0011 17.8 1.0 13 42-54 6-18 (26)
10 3lfh_A Manxa, phosphotransfera 22.8 6.8 0.00023 27.7 -2.3 17 9-25 86-102 (144)
11 3ipr_A PTS system, IIA compone 21.5 7.4 0.00025 27.5 -2.3 17 9-25 89-105 (150)
12 3gx1_A LIN1832 protein; APC633 21.2 8.9 0.0003 26.6 -1.9 16 10-25 87-102 (130)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=1e-56 Score=352.95 Aligned_cols=125 Identities=70% Similarity=1.368 Sum_probs=119.1
Q ss_pred CCCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992 3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG 82 (129)
Q Consensus 3 ~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~ 82 (129)
.+++|||||||||||||||+|+|.+| ++.|+.++|.+|||.+||+||||++.+| +||||+|||.+|++|||||||+|+
T Consensus 98 ~~~~dfYDVSlVDGfNlPm~i~P~~g-~~~C~~~~C~~dln~~CP~eL~v~~~~G-~~v~C~saC~af~~~~yCC~g~~~ 175 (222)
T 2ahn_A 98 GGGQDFYDVSLVDGFNLPMSVTPQGG-TGDCKTASCPANVNAVCPSELQKKGSDG-SVVACLSACVKFGTPQYCCTPPQN 175 (222)
T ss_dssp TTCEEEEEEECTTCBSSCEEEEEESC-BSCCCCEEECSCGGGGCCGGGEEECTTS-CEEEECCHHHHHCCHHHHCCTTSC
T ss_pred CCCCceeeeecccccccceEEEecCC-CCCcccCcccCchhhhCCHHHeeecCCC-cEecccccccccCCCccccCCCCC
Confidence 35799999999999999999999875 4689999999999999999999987667 899999999999999999999999
Q ss_pred CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992 83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP 129 (129)
Q Consensus 83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP 129 (129)
+|++|+||.||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 176 ~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 176 TPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp STTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred CCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999999998899999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=4.2e-52 Score=323.50 Aligned_cols=115 Identities=49% Similarity=1.077 Sum_probs=109.1
Q ss_pred CCcceeeeecccccCCccEEEecCCCCCCC-CCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992 4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNC-SSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG 82 (129)
Q Consensus 4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C-~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~ 82 (129)
+++|||||||||||||||+|+|.++ ..| +.++|.+|||..||+||||+ +||+|||++|++|||||||+|+
T Consensus 91 ~~~dfYDVSlVDGfNlPm~i~P~~g--~~C~~~~~C~~dln~~CP~~L~v~-------~gC~saC~~f~~~~yCC~g~~~ 161 (206)
T 1du5_A 91 NNLDFFDISLIDGFNVPMSFLPDGG--SGCSRGPRCAVDVNARCPAELRQD-------GVCNNACPVFKKDEYCCVGSAA 161 (206)
T ss_dssp GGEEEEEEECTTCBCSCEEEEECSS--SSCCCCCEECSCTTTTCCGGGEET-------TEECCHHHHHCCHHHHCCGGGG
T ss_pred CCCceeeeeeecccccCEEEecCCC--CCCcCCCcccccchhhCCHHHhhc-------cccCChhhccCCCcccccCCCC
Confidence 5689999999999999999999864 379 99999999999999999996 3799999999999999999998
Q ss_pred CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992 83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP 129 (129)
Q Consensus 83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP 129 (129)
+ +|+|+.||++||++||+||+|||||++|+|+|+++++|+|+|||
T Consensus 162 ~--~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 162 N--DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp G--GCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred C--cCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 7 99999999999999999999999999999999988999999998
No 3
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=3.3e-51 Score=318.89 Aligned_cols=114 Identities=46% Similarity=1.061 Sum_probs=107.1
Q ss_pred CCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCC
Q 037992 4 AGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGT 83 (129)
Q Consensus 4 ~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~ 83 (129)
+++|||||||||||||||+|+|.+++++.|+.++|.+|||++||+||||.+ ||+|||++|++|||||||
T Consensus 92 ~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~~-------~C~saC~af~~~~yCC~g---- 160 (208)
T 1aun_A 92 SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-------GCNNPCTTFGGQQYCCTQ---- 160 (208)
T ss_dssp GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-------EECCHHHHTCSHHHHCTT----
T ss_pred CCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHcccc-------cccCHhhhcCCCcccccC----
Confidence 468999999999999999999986324689999999999999999999963 799999999999999999
Q ss_pred CCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCC-CCceEEEccC
Q 037992 84 PDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTG-RPNYAITFCP 129 (129)
Q Consensus 84 p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~-~~~y~VtFCP 129 (129)
++|+|+.||++||++||+||+|||||++|+|+|++ +++|+|||||
T Consensus 161 -~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP 206 (208)
T 1aun_A 161 -GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp -SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred -CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCC
Confidence 68999999999999999999999999999999998 8899999998
No 4
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=4.6e-51 Score=316.44 Aligned_cols=112 Identities=46% Similarity=1.099 Sum_probs=106.3
Q ss_pred CCCcceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992 3 NAGQDFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG 82 (129)
Q Consensus 3 ~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~ 82 (129)
.+++|||||||||||||||+|+|.+ +.|+.++|.+|||++||+||||++ ||+|||++|++|||||||
T Consensus 89 ~~~~dfYDVSlVDGfNlP~~i~P~~---g~C~~~~C~~dln~~CP~~L~v~~-------gC~saC~af~~~~yCC~g--- 155 (200)
T 1z3q_A 89 FNNLDFFDISLVDGFNVPMDFSPTS---GGCRGIRCAADINGQCPGALKAPG-------GCNNPCTVFKTDQYCCNS--- 155 (200)
T ss_dssp TTTEEEEEEECTTCBSSCEEEEESS---SSSCCEEECSCHHHHCCTTTEETT-------EECCHHHHHCCHHHHCTT---
T ss_pred CCCCceeeeeeeccccCCeeeeeCC---CCCCccccccchhhhCCHHHcccC-------cccCcccccCCCcccCCC---
Confidence 3578999999999999999999985 479999999999999999999963 799999999999999999
Q ss_pred CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992 83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP 129 (129)
Q Consensus 83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP 129 (129)
++|+|+.||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 156 --~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 156 --GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp --SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred --CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 689999999999999999999999999999999988999999998
No 5
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=9.4e-50 Score=310.27 Aligned_cols=108 Identities=41% Similarity=1.014 Sum_probs=103.4
Q ss_pred ceeeeecccccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCCCCCC
Q 037992 7 DFYDVSLVDGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFGTPDK 86 (129)
Q Consensus 7 d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~~p~~ 86 (129)
|||||||||||||||+|+|.+ +.|+.++|.+|||+.||+||||++ +||+|||.+|++||||||| ++
T Consensus 98 dfYDVSlVDGfNlP~~i~p~~---g~C~~~~C~~dln~~CP~eL~v~~------~~C~saC~af~~~~yCC~g-----~~ 163 (206)
T 2vhk_A 98 DYIDISNIKGFNVPMNFSPTT---RGCRGVRCAADIVGQCPAKLKAPG------GGCNDACTVFQTSEYCCTT-----GK 163 (206)
T ss_dssp EEEEEECTTCBSSCEEEEESS---SSCCCEEECSCHHHHCCGGGBCTT------SSBCCHHHHHCCHHHHTTT-----SC
T ss_pred ceeeeeccCCccCCEEeeeCC---CCCCccccccchhhhCCHHHeecc------ccccChhhccCCCcccccC-----CC
Confidence 999999999999999999985 479999999999999999999973 4899999999999999999 68
Q ss_pred CCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCceEEEccC
Q 037992 87 CPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPNYAITFCP 129 (129)
Q Consensus 87 C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~y~VtFCP 129 (129)
|+|+.||++||++||+||+|||||+++ |+|+++++|+|||||
T Consensus 164 C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP 205 (206)
T 2vhk_A 164 CGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCP 205 (206)
T ss_dssp CCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESC
T ss_pred CCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCC
Confidence 999999999999999999999999999 999988999999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=99.68 E-value=2.6e-17 Score=122.51 Aligned_cols=57 Identities=32% Similarity=0.747 Sum_probs=46.6
Q ss_pred CCcceeeeecc-cccCCccEEEecCCCCCCCCCCCCcccccccCCccceecCCCCCccccccchhhhcCCCCccccCCCC
Q 037992 4 AGQDFYDVSLV-DGFNLPLSLAPQGGGSGNCSSTSCPQNVNAVCPLELAVKGSDGSSVIACKSACLALNQPQYCCTGDFG 82 (129)
Q Consensus 4 ~~~d~YdVSlV-dG~NlP~~i~p~~g~~~~C~~~~C~~dln~~CP~~l~v~~~~g~~vvaC~SaC~~~~~~~~CC~g~~~ 82 (129)
+++|||||||| |||||||+|+|+++ . ..-|.+
T Consensus 93 ~~~d~YDVSlV~dG~NlP~~i~P~~g-~-----------------------------~~~C~~----------------- 125 (151)
T 3g7m_A 93 QGNYTYGVTSTLKGFNVPMNLKCSSG-D-----------------------------ALPCRK----------------- 125 (151)
T ss_dssp SSEEEEEEESSSSCCSSCEEEEESSS-C-----------------------------CEEECS-----------------
T ss_pred CCCceEEEEeccCCCCCCeEEEeCCC-C-----------------------------cCcCCC-----------------
Confidence 46899999999 99999999999864 0 012543
Q ss_pred CCCCCCCCchhHHHHhcCCCcccccCCCCCCceeeCCCCc-eEEEccC
Q 037992 83 TPDKCPPTDYSKIFKTQCPQAYSYAYDDKSSTFTCTGRPN-YAITFCP 129 (129)
Q Consensus 83 ~p~~C~pt~ys~~fK~~CP~AYsya~Dd~~s~~tC~~~~~-y~VtFCP 129 (129)
..||+||.|+ +.|+...+ |+|||||
T Consensus 126 ---------------~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 126 ---------------AGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp ---------------TTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred ---------------CCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 3589999887 79999887 9999998
No 7
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=79.22 E-value=0.49 Score=26.51 Aligned_cols=14 Identities=36% Similarity=1.201 Sum_probs=11.5
Q ss_pred hhhcCCCCccccCC
Q 037992 67 CLALNQPQYCCTGD 80 (129)
Q Consensus 67 C~~~~~~~~CC~g~ 80 (129)
|..|+.++|||.|+
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 45699999999884
No 8
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=74.80 E-value=2.7 Score=34.74 Aligned_cols=40 Identities=25% Similarity=0.482 Sum_probs=29.2
Q ss_pred CchhHHHHhcCC--CcccccCCCCC---CceeeCCCCceEEEccC
Q 037992 90 TDYSKIFKTQCP--QAYSYAYDDKS---STFTCTGRPNYAITFCP 129 (129)
Q Consensus 90 t~ys~~fK~~CP--~AYsya~Dd~~---s~~tC~~~~~y~VtFCP 129 (129)
+.|+|++++.=. .+|.|||||-. ++..-......+||+-|
T Consensus 321 NhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 321 NHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp CHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred cHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 569999999865 68999999743 45555555667777654
No 9
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=22.96 E-value=33 Score=17.81 Aligned_cols=13 Identities=31% Similarity=0.544 Sum_probs=8.3
Q ss_pred ccccCCccceecC
Q 037992 42 VNAVCPLELAVKG 54 (129)
Q Consensus 42 ln~~CP~~l~v~~ 54 (129)
+++.||+.+.=.+
T Consensus 6 ~~sdCp~~~aC~n 18 (26)
T 1oig_A 6 LNSDCPSNQACVN 18 (26)
T ss_dssp SSTTSSTTCEECS
T ss_pred ccCcCCcCHhhhc
Confidence 4678888655443
No 10
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=22.80 E-value=6.8 Score=27.66 Aligned_cols=17 Identities=35% Similarity=0.841 Sum_probs=14.4
Q ss_pred eeeecccccCCccEEEe
Q 037992 9 YDVSLVDGFNLPLSLAP 25 (129)
Q Consensus 9 YdVSlVdG~NlP~~i~p 25 (129)
.++-+|.|.||||.++-
T Consensus 86 ~~v~vItGvNLpMlle~ 102 (144)
T 3lfh_A 86 YDVKVITGINMPMLVEL 102 (144)
T ss_dssp HCCEEEESCCHHHHHHH
T ss_pred CCEEEEeCCCHHHHHHH
Confidence 36789999999999864
No 11
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=21.53 E-value=7.4 Score=27.52 Aligned_cols=17 Identities=35% Similarity=0.595 Sum_probs=14.5
Q ss_pred eeeecccccCCccEEEe
Q 037992 9 YDVSLVDGFNLPLSLAP 25 (129)
Q Consensus 9 YdVSlVdG~NlP~~i~p 25 (129)
.+|-+|.|.||||.++-
T Consensus 89 ~~v~vI~GvNLpmlle~ 105 (150)
T 3ipr_A 89 KKIFVVSGTNLPMVLEA 105 (150)
T ss_dssp TTEEEEESCCHHHHHHH
T ss_pred CCEEEEeCCCHHHHHHH
Confidence 46889999999999863
No 12
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=21.21 E-value=8.9 Score=26.55 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=13.8
Q ss_pred eeecccccCCccEEEe
Q 037992 10 DVSLVDGFNLPLSLAP 25 (129)
Q Consensus 10 dVSlVdG~NlP~~i~p 25 (129)
+|-+|.|-||||.|+-
T Consensus 87 ~v~vI~gvnlpmllea 102 (130)
T 3gx1_A 87 RTKTVTMVSTPVVLEA 102 (130)
T ss_dssp CEEEECSCCHHHHHHH
T ss_pred CEEEEeCCCHHHHHHH
Confidence 5789999999999864
Done!