Query 037999
Match_columns 447
No_of_seqs 223 out of 1756
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 06:29:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037999.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037999hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 7.8E-70 1.7E-74 537.3 40.8 416 1-446 24-446 (451)
2 PLN02555 limonoid glucosyltran 100.0 4.1E-69 8.8E-74 534.0 41.5 430 1-447 24-466 (480)
3 PLN02173 UDP-glucosyl transfer 100.0 1.6E-68 3.4E-73 525.6 39.4 411 1-447 22-445 (449)
4 PLN02562 UDP-glycosyltransfera 100.0 1.5E-67 3.2E-72 522.7 40.4 415 1-447 23-446 (448)
5 PLN02207 UDP-glycosyltransfera 100.0 1.4E-67 3.1E-72 520.7 39.8 421 1-447 20-462 (468)
6 PLN02152 indole-3-acetate beta 100.0 2.7E-67 5.9E-72 517.7 39.7 417 1-447 20-453 (455)
7 PLN02863 UDP-glucoronosyl/UDP- 100.0 2.8E-66 6E-71 515.5 40.6 429 1-447 26-468 (477)
8 PLN02210 UDP-glucosyl transfer 100.0 3.2E-66 7E-71 513.6 40.8 416 1-447 25-452 (456)
9 PLN02992 coniferyl-alcohol glu 100.0 3.5E-66 7.6E-71 511.7 39.4 412 1-447 22-466 (481)
10 PLN03015 UDP-glucosyl transfer 100.0 8.8E-66 1.9E-70 505.9 41.3 421 1-447 20-465 (470)
11 PLN02534 UDP-glycosyltransfera 100.0 1.2E-65 2.5E-70 510.0 40.7 427 1-447 25-483 (491)
12 PLN00164 glucosyltransferase; 100.0 1.7E-65 3.7E-70 511.5 39.6 420 1-447 20-470 (480)
13 PLN02554 UDP-glycosyltransfera 100.0 5E-65 1.1E-69 510.1 38.1 423 1-447 19-475 (481)
14 PLN02448 UDP-glycosyltransfera 100.0 2.2E-64 4.8E-69 503.7 40.5 415 1-447 27-454 (459)
15 PLN03004 UDP-glycosyltransfera 100.0 1E-64 2.2E-69 498.8 36.1 415 1-440 20-451 (451)
16 PLN02670 transferase, transfer 100.0 4.3E-64 9.2E-69 496.5 39.0 421 1-446 23-461 (472)
17 PLN02167 UDP-glycosyltransfera 100.0 1.4E-63 3E-68 498.9 36.7 420 1-447 20-469 (475)
18 PLN02764 glycosyltransferase f 100.0 9E-63 2E-67 483.2 39.3 401 1-447 22-442 (453)
19 PLN03007 UDP-glucosyltransfera 100.0 2.2E-62 4.7E-67 491.8 40.0 426 1-446 22-476 (482)
20 PLN02208 glycosyltransferase f 100.0 1.8E-62 3.8E-67 483.8 37.4 395 1-447 21-436 (442)
21 PLN00414 glycosyltransferase f 100.0 1.5E-61 3.3E-66 477.7 37.3 395 1-447 21-437 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.3E-50 2.8E-55 407.2 24.6 315 75-430 123-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 3.7E-53 8E-58 432.2 -2.9 379 1-430 16-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 9.8E-43 2.1E-47 355.5 18.4 390 1-428 22-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 3.5E-38 7.7E-43 312.1 34.6 347 1-430 12-376 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 9.5E-36 2.1E-40 295.9 22.0 350 1-429 17-387 (401)
27 COG1819 Glycosyl transferases, 100.0 4.1E-33 9E-38 273.3 20.6 150 263-430 235-385 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 7.2E-18 1.6E-22 162.3 25.9 121 264-408 191-317 (318)
29 PRK12446 undecaprenyldiphospho 99.8 2.3E-17 5.1E-22 159.9 24.0 145 263-423 183-336 (352)
30 TIGR00661 MJ1255 conserved hyp 99.7 6.3E-16 1.4E-20 148.7 23.6 122 265-411 188-314 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.7 1.5E-14 3.2E-19 138.9 24.7 146 264-423 182-338 (357)
32 PRK00726 murG undecaprenyldiph 99.6 1.4E-12 3E-17 127.7 26.1 94 326-424 236-335 (357)
33 cd03785 GT1_MurG MurG is an N- 99.5 4.8E-12 1.1E-16 123.4 26.3 139 263-411 179-324 (350)
34 PF04101 Glyco_tran_28_C: Glyc 99.4 4E-15 8.6E-20 129.1 -3.3 135 267-411 1-144 (167)
35 TIGR01133 murG undecaprenyldip 99.4 7E-10 1.5E-14 108.1 27.2 81 334-419 243-327 (348)
36 TIGR03590 PseG pseudaminic aci 99.3 1.8E-10 3.8E-15 108.3 20.6 103 266-381 171-278 (279)
37 COG4671 Predicted glycosyl tra 99.2 3.6E-09 7.8E-14 97.6 22.2 133 264-410 218-364 (400)
38 TIGR00215 lpxB lipid-A-disacch 99.2 1.2E-09 2.6E-14 107.6 19.6 105 335-445 261-383 (385)
39 TIGR03492 conserved hypothetic 99.2 2.5E-08 5.4E-13 98.4 26.5 166 264-444 204-392 (396)
40 PLN02605 monogalactosyldiacylg 99.1 6.1E-08 1.3E-12 95.7 24.2 135 263-411 204-347 (382)
41 PRK13609 diacylglycerol glucos 99.0 4.7E-08 1E-12 96.5 21.6 132 264-411 201-338 (380)
42 cd03814 GT1_like_2 This family 99.0 8.1E-07 1.8E-11 86.3 28.7 127 266-411 197-332 (364)
43 PRK00025 lpxB lipid-A-disaccha 98.9 9E-08 1.9E-12 94.5 19.7 102 336-444 256-371 (380)
44 cd03800 GT1_Sucrose_synthase T 98.9 9E-06 1.9E-10 80.4 32.2 134 266-411 220-368 (398)
45 cd03818 GT1_ExpC_like This fam 98.8 2.5E-05 5.4E-10 77.6 33.3 82 324-411 280-366 (396)
46 cd03823 GT1_ExpE7_like This fa 98.8 1.3E-05 2.9E-10 77.5 29.5 131 265-411 190-329 (359)
47 cd03794 GT1_wbuB_like This fam 98.8 1.4E-05 3E-10 78.0 28.2 133 264-411 218-365 (394)
48 PRK13608 diacylglycerol glucos 98.7 2.3E-07 4.9E-12 91.9 15.3 132 264-411 201-338 (391)
49 PLN02871 UDP-sulfoquinovose:DA 98.7 1.4E-05 2.9E-10 81.2 28.3 126 267-411 264-400 (465)
50 TIGR03449 mycothiol_MshA UDP-N 98.7 0.00012 2.5E-09 73.0 31.8 80 324-411 282-368 (405)
51 PRK10307 putative glycosyl tra 98.6 0.00012 2.6E-09 73.1 31.4 93 325-423 284-387 (412)
52 cd03816 GT1_ALG1_like This fam 98.6 4.6E-05 1E-09 76.1 28.1 90 325-424 294-399 (415)
53 TIGR02472 sucr_P_syn_N sucrose 98.6 6E-05 1.3E-09 75.9 29.0 83 323-411 315-406 (439)
54 PF03033 Glyco_transf_28: Glyc 98.6 8.5E-09 1.8E-13 86.3 0.3 108 1-122 15-134 (139)
55 cd03808 GT1_cap1E_like This fa 98.6 0.00028 6.1E-09 67.8 31.6 134 264-411 186-329 (359)
56 cd03817 GT1_UGDG_like This fam 98.6 0.00011 2.3E-09 71.5 28.7 142 266-426 202-360 (374)
57 cd05844 GT1_like_7 Glycosyltra 98.5 9.2E-05 2E-09 72.4 26.8 81 323-411 243-336 (367)
58 cd03801 GT1_YqgM_like This fam 98.5 0.00029 6.4E-09 67.8 29.9 81 323-411 254-341 (374)
59 cd03795 GT1_like_4 This family 98.5 6E-05 1.3E-09 73.2 24.9 129 266-411 191-332 (357)
60 cd03805 GT1_ALG2_like This fam 98.5 0.00011 2.3E-09 72.8 26.5 80 323-411 278-364 (392)
61 cd03820 GT1_amsD_like This fam 98.5 0.00031 6.6E-09 67.3 28.7 88 324-420 234-326 (348)
62 cd03821 GT1_Bme6_like This fam 98.5 0.00043 9.2E-09 67.1 30.0 79 323-411 260-345 (375)
63 cd04962 GT1_like_5 This family 98.5 0.00044 9.5E-09 67.7 29.5 92 324-423 252-350 (371)
64 cd03798 GT1_wlbH_like This fam 98.5 0.00045 9.8E-09 66.7 29.4 134 265-411 201-344 (377)
65 TIGR00236 wecB UDP-N-acetylglu 98.4 7.1E-05 1.5E-09 73.4 23.1 106 324-445 254-362 (365)
66 cd03819 GT1_WavL_like This fam 98.4 0.0012 2.7E-08 63.9 31.4 148 265-424 184-346 (355)
67 cd03796 GT1_PIG-A_like This fa 98.4 0.00035 7.6E-09 69.4 26.4 130 265-411 192-333 (398)
68 cd03786 GT1_UDP-GlcNAc_2-Epime 98.3 2.3E-05 5E-10 76.7 16.8 133 264-411 197-337 (363)
69 cd03825 GT1_wcfI_like This fam 98.3 0.00052 1.1E-08 66.8 26.3 81 323-411 242-330 (365)
70 PRK05749 3-deoxy-D-manno-octul 98.3 0.00053 1.2E-08 68.7 26.7 80 326-411 303-388 (425)
71 TIGR02468 sucrsPsyn_pln sucros 98.3 0.0011 2.3E-08 71.9 29.8 93 324-422 547-650 (1050)
72 cd03822 GT1_ecORF704_like This 98.3 0.0015 3.2E-08 63.4 28.6 80 323-411 245-334 (366)
73 cd03799 GT1_amsK_like This is 98.3 0.0012 2.6E-08 64.0 27.2 132 265-411 178-327 (355)
74 PF04007 DUF354: Protein of un 98.2 0.0018 3.9E-08 62.0 25.1 127 264-410 178-309 (335)
75 PLN00142 sucrose synthase 98.2 0.0078 1.7E-07 63.9 31.6 80 324-409 641-730 (815)
76 cd03807 GT1_WbnK_like This fam 98.1 0.0063 1.4E-07 58.6 29.2 78 324-411 250-332 (365)
77 KOG3349 Predicted glycosyltran 98.1 2.8E-05 6E-10 63.3 9.5 115 266-390 4-130 (170)
78 cd04955 GT1_like_6 This family 98.1 0.0058 1.2E-07 59.4 27.6 77 323-411 246-330 (363)
79 cd03809 GT1_mtfB_like This fam 98.0 0.0013 2.8E-08 63.8 22.1 135 267-422 196-345 (365)
80 TIGR02470 sucr_synth sucrose s 98.0 0.031 6.7E-07 59.4 35.8 80 324-409 618-707 (784)
81 cd03802 GT1_AviGT4_like This f 98.0 0.002 4.4E-08 61.9 22.2 128 268-411 173-308 (335)
82 cd03811 GT1_WabH_like This fam 98.0 0.0025 5.4E-08 61.0 22.6 129 265-408 188-326 (353)
83 cd03812 GT1_CapH_like This fam 97.9 0.017 3.8E-07 55.9 26.3 136 265-418 191-336 (358)
84 COG1519 KdtA 3-deoxy-D-manno-o 97.8 0.033 7.1E-07 54.0 26.6 131 278-428 268-405 (419)
85 PF02350 Epimerase_2: UDP-N-ac 97.8 0.00029 6.2E-09 68.4 12.7 141 263-422 178-327 (346)
86 PLN02275 transferase, transfer 97.8 0.045 9.8E-07 53.8 27.9 75 325-409 286-371 (371)
87 cd03806 GT1_ALG11_like This fa 97.8 0.055 1.2E-06 54.2 28.8 79 323-411 303-392 (419)
88 cd04946 GT1_AmsK_like This fam 97.7 0.0015 3.3E-08 65.0 16.6 163 266-446 230-407 (407)
89 PRK15179 Vi polysaccharide bio 97.6 0.13 2.7E-06 54.6 29.4 95 323-424 572-674 (694)
90 PRK01021 lpxB lipid-A-disaccha 97.5 0.049 1.1E-06 55.8 24.0 194 199-427 368-589 (608)
91 PF02684 LpxB: Lipid-A-disacch 97.5 0.016 3.4E-07 56.5 19.8 206 199-442 140-369 (373)
92 cd03791 GT1_Glycogen_synthase_ 97.5 0.015 3.3E-07 59.1 20.8 132 266-410 296-441 (476)
93 PF13844 Glyco_transf_41: Glyc 97.4 0.0032 6.9E-08 62.6 14.1 141 263-411 282-430 (468)
94 COG5017 Uncharacterized conser 97.4 0.0014 3E-08 52.6 9.0 105 268-392 2-121 (161)
95 PRK15484 lipopolysaccharide 1, 97.4 0.012 2.5E-07 58.1 17.9 82 323-411 255-344 (380)
96 PF00534 Glycos_transf_1: Glyc 97.4 0.0057 1.2E-07 52.7 13.9 134 264-411 13-158 (172)
97 PRK15427 colanic acid biosynth 97.4 0.0074 1.6E-07 60.1 16.0 81 323-411 277-371 (406)
98 PLN02949 transferase, transfer 97.3 0.088 1.9E-06 53.3 23.2 94 323-424 333-438 (463)
99 TIGR03568 NeuC_NnaA UDP-N-acet 97.3 0.061 1.3E-06 52.7 21.3 129 265-410 201-338 (365)
100 PRK14089 ipid-A-disaccharide s 97.2 0.0039 8.5E-08 60.2 11.9 156 266-444 168-344 (347)
101 cd03804 GT1_wbaZ_like This fam 97.2 0.0018 3.9E-08 63.0 9.7 126 268-411 197-326 (351)
102 COG3980 spsG Spore coat polysa 97.2 0.0054 1.2E-07 55.8 11.5 141 267-423 160-303 (318)
103 PLN02846 digalactosyldiacylgly 97.1 0.39 8.5E-06 48.3 24.4 72 329-411 288-363 (462)
104 cd04950 GT1_like_1 Glycosyltra 97.0 0.44 9.5E-06 46.8 27.9 77 324-410 253-339 (373)
105 PRK09814 beta-1,6-galactofuran 96.9 0.008 1.7E-07 58.2 11.1 112 323-446 205-331 (333)
106 PF13692 Glyco_trans_1_4: Glyc 96.7 0.012 2.5E-07 48.4 9.2 126 268-411 4-135 (135)
107 PRK09922 UDP-D-galactose:(gluc 96.7 0.02 4.3E-07 56.0 12.2 130 266-411 180-324 (359)
108 COG0381 WecB UDP-N-acetylgluco 96.5 0.31 6.7E-06 47.0 17.8 137 264-422 203-350 (383)
109 cd04951 GT1_WbdM_like This fam 96.4 0.086 1.9E-06 51.0 14.3 125 266-410 188-325 (360)
110 cd04949 GT1_gtfA_like This fam 96.4 0.05 1.1E-06 53.2 12.7 100 323-427 259-363 (372)
111 TIGR03088 stp2 sugar transfera 96.4 0.096 2.1E-06 51.3 14.5 79 325-411 255-338 (374)
112 KOG4626 O-linked N-acetylgluco 96.3 0.02 4.4E-07 57.5 8.9 138 263-407 756-901 (966)
113 COG3914 Spy Predicted O-linked 96.2 0.048 1E-06 54.6 11.2 133 263-406 427-573 (620)
114 cd03813 GT1_like_3 This family 96.1 0.3 6.6E-06 49.7 16.6 81 324-411 353-442 (475)
115 TIGR03087 stp1 sugar transfera 96.0 0.22 4.8E-06 49.3 15.2 78 324-411 279-362 (397)
116 TIGR02918 accessory Sec system 96.0 0.2 4.3E-06 51.3 14.6 98 324-427 375-484 (500)
117 TIGR02149 glgA_Coryne glycogen 95.9 0.18 3.8E-06 49.6 13.8 79 326-411 261-352 (388)
118 PHA01633 putative glycosyl tra 95.7 0.22 4.8E-06 47.9 12.8 102 323-427 199-324 (335)
119 PF13579 Glyco_trans_4_4: Glyc 95.5 0.027 5.8E-07 47.3 5.5 93 2-115 8-102 (160)
120 PF06722 DUF1205: Protein of u 95.5 0.026 5.6E-07 43.5 4.5 49 255-303 30-83 (97)
121 PLN02501 digalactosyldiacylgly 95.0 5.3 0.00012 42.1 20.6 75 326-411 602-681 (794)
122 cd03792 GT1_Trehalose_phosphor 94.9 0.93 2E-05 44.4 15.1 78 324-411 251-337 (372)
123 PRK14098 glycogen synthase; Pr 94.7 0.4 8.6E-06 49.0 12.1 130 267-410 308-450 (489)
124 PRK15490 Vi polysaccharide bio 94.6 2 4.4E-05 44.1 16.6 75 323-405 453-532 (578)
125 TIGR02095 glgA glycogen/starch 94.4 0.48 1E-05 48.2 11.9 133 266-410 291-436 (473)
126 PRK00654 glgA glycogen synthas 93.6 0.73 1.6E-05 46.8 11.5 133 266-410 282-427 (466)
127 PRK10017 colanic acid biosynth 93.4 2.3 5.1E-05 42.4 14.3 158 257-422 226-402 (426)
128 COG0763 LpxB Lipid A disacchar 92.7 1.9 4.2E-05 41.6 11.8 173 257-445 180-376 (381)
129 PF13524 Glyco_trans_1_2: Glyc 91.8 2.6 5.7E-05 31.7 9.7 82 350-445 9-91 (92)
130 PF13439 Glyco_transf_4: Glyco 91.0 0.73 1.6E-05 39.1 6.7 21 2-22 19-39 (177)
131 PF12000 Glyco_trans_4_3: Gkyc 90.4 2 4.3E-05 36.9 8.5 91 10-116 1-95 (171)
132 PF13477 Glyco_trans_4_2: Glyc 90.0 4.9 0.00011 32.8 10.6 87 2-114 14-104 (139)
133 PLN02939 transferase, transfer 88.5 11 0.00024 41.3 14.0 83 324-410 836-930 (977)
134 PRK10125 putative glycosyl tra 88.4 19 0.00041 35.8 15.1 100 283-406 258-366 (405)
135 PLN02316 synthase/transferase 88.1 12 0.00026 41.6 14.3 105 324-436 899-1019(1036)
136 PF06258 Mito_fiss_Elm1: Mitoc 86.8 4.1 8.9E-05 38.8 8.9 59 333-393 220-281 (311)
137 PHA01630 putative group 1 glyc 86.7 31 0.00067 33.2 16.1 76 331-411 196-294 (331)
138 TIGR02400 trehalose_OtsA alpha 84.4 11 0.00024 38.1 11.2 100 331-446 342-452 (456)
139 TIGR02919 accessory Sec system 83.7 13 0.00028 37.3 11.2 136 264-427 282-426 (438)
140 TIGR03713 acc_sec_asp1 accesso 82.9 4.2 9.1E-05 41.8 7.5 89 325-426 409-505 (519)
141 cd01635 Glycosyltransferase_GT 82.4 9.9 0.00021 33.3 9.1 49 323-373 159-215 (229)
142 KOG1111 N-acetylglucosaminyltr 82.0 51 0.0011 31.9 18.0 84 277-369 207-301 (426)
143 smart00851 MGS MGS-like domain 80.6 13 0.00028 28.0 7.8 79 1-113 2-89 (90)
144 PRK00654 glgA glycogen synthas 78.1 14 0.00031 37.4 9.5 19 3-21 25-43 (466)
145 COG4370 Uncharacterized protei 77.8 5.1 0.00011 37.4 5.4 90 325-421 294-387 (412)
146 cd03788 GT1_TPS Trehalose-6-Ph 77.7 9.1 0.0002 38.8 8.0 101 330-446 346-457 (460)
147 COG0496 SurE Predicted acid ph 76.8 13 0.00027 34.1 7.7 23 2-25 17-39 (252)
148 PF02142 MGS: MGS-like domain 76.0 2.6 5.5E-05 32.3 2.7 84 1-113 2-94 (95)
149 cd03793 GT1_Glycogen_synthase_ 74.6 11 0.00023 39.0 7.3 76 334-410 467-551 (590)
150 PRK14099 glycogen synthase; Pr 73.6 27 0.00059 35.6 10.2 83 323-408 348-441 (485)
151 cd01424 MGS_CPS_II Methylglyox 72.4 18 0.0004 28.3 6.9 79 1-114 15-100 (110)
152 PRK02797 4-alpha-L-fucosyltran 71.5 89 0.0019 29.7 11.9 81 325-410 206-293 (322)
153 PRK13933 stationary phase surv 69.6 33 0.00071 31.6 8.7 22 2-24 17-38 (253)
154 COG0438 RfaG Glycosyltransfera 69.5 94 0.002 28.7 14.3 79 325-411 257-342 (381)
155 PRK13932 stationary phase surv 69.2 31 0.00066 31.9 8.4 22 2-24 22-43 (257)
156 cd00532 MGS-like MGS-like doma 68.1 28 0.0006 27.5 7.0 80 1-114 14-104 (112)
157 PF04464 Glyphos_transf: CDP-G 67.8 11 0.00023 36.9 5.6 111 324-445 251-368 (369)
158 cd03789 GT1_LPS_heptosyltransf 67.5 19 0.0004 33.6 7.0 95 265-369 121-223 (279)
159 cd01423 MGS_CPS_I_III Methylgl 66.1 22 0.00048 28.2 6.2 83 1-114 15-106 (116)
160 cd01425 RPS2 Ribosomal protein 65.7 24 0.00053 31.0 6.9 32 88-119 127-160 (193)
161 TIGR00087 surE 5'/3'-nucleotid 64.3 49 0.0011 30.3 8.7 23 2-25 17-39 (244)
162 TIGR02193 heptsyl_trn_I lipopo 64.2 29 0.00062 33.0 7.7 131 264-409 178-319 (319)
163 TIGR00715 precor6x_red precorr 63.4 53 0.0011 30.3 8.9 21 3-23 14-34 (256)
164 cd01635 Glycosyltransferase_GT 63.0 33 0.00072 29.9 7.5 28 88-115 51-81 (229)
165 PRK13935 stationary phase surv 62.9 50 0.0011 30.4 8.5 22 2-24 17-38 (253)
166 COG1817 Uncharacterized protei 62.8 1.4E+02 0.0031 28.3 19.8 94 3-119 18-114 (346)
167 PF05159 Capsule_synth: Capsul 62.6 31 0.00067 32.0 7.4 43 326-371 184-226 (269)
168 PRK13931 stationary phase surv 61.8 64 0.0014 29.9 9.1 97 2-117 17-129 (261)
169 COG0052 RpsB Ribosomal protein 61.2 33 0.00073 31.1 6.8 32 88-119 156-189 (252)
170 PRK12311 rpsB 30S ribosomal pr 60.8 30 0.00065 33.1 6.9 34 87-120 151-186 (326)
171 PRK00346 surE 5'(3')-nucleotid 60.7 50 0.0011 30.4 8.1 22 2-24 17-38 (250)
172 PRK08057 cobalt-precorrin-6x r 60.1 57 0.0012 30.0 8.4 39 75-116 54-99 (248)
173 COG3980 spsG Spore coat polysa 59.6 27 0.00059 32.5 6.0 81 1-120 21-104 (318)
174 COG2874 FlaH Predicted ATPases 57.2 48 0.001 29.7 6.9 23 2-24 46-68 (235)
175 TIGR00347 bioD dethiobiotin sy 56.9 43 0.00092 28.3 6.8 43 78-120 89-140 (166)
176 TIGR02195 heptsyl_trn_II lipop 55.2 26 0.00056 33.6 5.7 36 76-118 243-279 (334)
177 cd03792 GT1_Trehalose_phosphor 54.6 30 0.00065 33.6 6.1 20 2-21 19-38 (372)
178 PF04127 DFP: DNA / pantothena 53.7 14 0.00031 32.2 3.2 21 2-22 33-53 (185)
179 PLN02470 acetolactate synthase 53.7 52 0.0011 34.5 8.0 92 271-370 2-109 (585)
180 PF02571 CbiJ: Precorrin-6x re 52.4 65 0.0014 29.6 7.5 39 75-116 55-100 (249)
181 PRK13934 stationary phase surv 52.2 33 0.00072 31.8 5.5 22 2-24 17-38 (266)
182 PRK06718 precorrin-2 dehydroge 52.1 1.4E+02 0.0031 26.3 9.5 148 258-431 5-166 (202)
183 COG0801 FolK 7,8-dihydro-6-hyd 51.6 32 0.00069 29.2 4.8 35 267-301 3-37 (160)
184 PRK10916 ADP-heptose:LPS hepto 51.5 24 0.00052 34.1 4.9 35 76-117 253-288 (348)
185 TIGR01470 cysG_Nterm siroheme 50.7 1.4E+02 0.003 26.5 9.1 150 258-430 4-165 (205)
186 PF10649 DUF2478: Protein of u 50.1 97 0.0021 26.3 7.5 99 2-118 17-132 (159)
187 PRK12446 undecaprenyldiphospho 49.3 84 0.0018 30.5 8.2 98 266-369 3-120 (352)
188 TIGR03088 stp2 sugar transfera 48.5 57 0.0012 31.6 7.0 84 2-114 21-108 (374)
189 PLN02316 synthase/transferase 48.4 1.2E+02 0.0026 34.1 9.8 21 2-22 611-631 (1036)
190 PF08323 Glyco_transf_5: Starc 47.6 16 0.00035 33.4 2.8 20 3-22 24-43 (245)
191 COG1797 CobB Cobyrinic acid a, 47.3 81 0.0018 31.4 7.5 50 76-125 66-127 (451)
192 PF05693 Glycogen_syn: Glycoge 46.8 66 0.0014 33.5 7.1 94 333-426 461-565 (633)
193 COG1154 Dxs Deoxyxylulose-5-ph 46.3 2.6E+02 0.0057 29.1 11.1 52 350-410 565-623 (627)
194 COG3660 Predicted nucleoside-d 46.1 2.3E+02 0.005 26.3 9.5 117 267-392 164-297 (329)
195 cd01421 IMPCH Inosine monophos 45.0 87 0.0019 27.3 6.6 36 1-49 13-48 (187)
196 TIGR02195 heptsyl_trn_II lipop 45.0 1E+02 0.0022 29.5 8.1 96 264-369 173-276 (334)
197 PF07429 Glyco_transf_56: 4-al 44.6 3E+02 0.0066 26.7 11.4 81 325-410 245-332 (360)
198 PF01075 Glyco_transf_9: Glyco 44.5 46 0.00099 30.2 5.3 98 264-369 104-208 (247)
199 PLN03063 alpha,alpha-trehalose 44.0 64 0.0014 35.3 7.0 64 337-410 371-442 (797)
200 COG2099 CobK Precorrin-6x redu 43.9 99 0.0022 28.3 7.0 38 75-115 55-99 (257)
201 COG1703 ArgK Putative periplas 43.9 1.8E+02 0.0039 27.5 8.8 19 3-21 70-88 (323)
202 cd03789 GT1_LPS_heptosyltransf 43.2 45 0.00098 31.0 5.1 84 1-118 142-226 (279)
203 TIGR02201 heptsyl_trn_III lipo 43.1 84 0.0018 30.2 7.2 98 264-369 180-285 (344)
204 PRK10964 ADP-heptose:LPS hepto 42.8 84 0.0018 29.9 7.0 131 266-410 179-321 (322)
205 PRK09922 UDP-D-galactose:(gluc 42.7 68 0.0015 31.0 6.5 21 2-22 21-43 (359)
206 PRK10422 lipopolysaccharide co 42.7 98 0.0021 29.9 7.6 97 265-369 183-287 (352)
207 PRK00090 bioD dithiobiotin syn 42.2 1.2E+02 0.0027 26.9 7.7 31 88-118 103-142 (222)
208 COG0859 RfaF ADP-heptose:LPS h 41.5 43 0.00093 32.3 4.8 82 2-119 198-280 (334)
209 TIGR00379 cobB cobyrinic acid 40.4 56 0.0012 33.0 5.6 44 77-120 66-121 (449)
210 PF00070 Pyr_redox: Pyridine n 40.4 43 0.00093 24.3 3.6 21 2-22 12-32 (80)
211 cd07039 TPP_PYR_POX Pyrimidine 40.1 73 0.0016 27.0 5.5 27 344-370 64-96 (164)
212 PF10093 DUF2331: Uncharacteri 39.5 89 0.0019 30.5 6.4 86 278-368 192-287 (374)
213 PF01975 SurE: Survival protei 39.3 23 0.0005 31.2 2.3 24 2-25 17-40 (196)
214 PF13450 NAD_binding_8: NAD(P) 39.1 38 0.00082 23.9 3.0 19 2-20 9-27 (68)
215 COG1090 Predicted nucleoside-d 39.1 2.1E+02 0.0046 26.8 8.4 19 3-21 13-31 (297)
216 PF06925 MGDG_synth: Monogalac 38.7 86 0.0019 26.6 5.8 42 73-116 76-123 (169)
217 PRK10916 ADP-heptose:LPS hepto 38.0 1.4E+02 0.0029 28.9 7.8 96 264-369 179-286 (348)
218 PF01075 Glyco_transf_9: Glyco 37.8 31 0.00066 31.3 3.0 36 77-119 176-212 (247)
219 TIGR00355 purH phosphoribosyla 37.7 1.1E+02 0.0023 31.3 6.8 84 1-98 13-101 (511)
220 COG2086 FixA Electron transfer 37.6 1.5E+02 0.0033 27.4 7.4 41 75-117 100-146 (260)
221 PRK01077 cobyrinic acid a,c-di 37.5 40 0.00088 34.0 4.1 43 78-120 71-125 (451)
222 TIGR02095 glgA glycogen/starch 37.5 28 0.0006 35.4 2.9 20 3-22 25-44 (473)
223 TIGR00313 cobQ cobyric acid sy 37.0 1.7E+02 0.0037 29.8 8.5 42 78-119 112-164 (475)
224 TIGR01162 purE phosphoribosyla 36.5 2.3E+02 0.005 23.9 7.6 19 414-432 131-149 (156)
225 cd03466 Nitrogenase_NifN_2 Nit 36.1 2.4E+02 0.0052 28.3 9.3 35 76-115 362-396 (429)
226 PF09001 DUF1890: Domain of un 35.5 25 0.00055 28.7 1.7 29 2-30 17-45 (139)
227 cd07025 Peptidase_S66 LD-Carbo 35.4 87 0.0019 29.4 5.7 76 277-373 45-122 (282)
228 PF00731 AIRC: AIR carboxylase 35.4 2.7E+02 0.0058 23.4 13.9 137 268-430 3-149 (150)
229 KOG2941 Beta-1,4-mannosyltrans 35.0 4.4E+02 0.0094 25.7 12.4 142 264-423 253-423 (444)
230 cd01840 SGNH_hydrolase_yrhL_li 34.9 70 0.0015 26.5 4.6 37 264-301 50-86 (150)
231 cd01965 Nitrogenase_MoFe_beta_ 34.6 74 0.0016 31.9 5.4 35 76-115 361-395 (428)
232 COG0859 RfaF ADP-heptose:LPS h 34.2 1.4E+02 0.003 28.7 7.1 95 265-369 175-276 (334)
233 PRK10422 lipopolysaccharide co 34.0 65 0.0014 31.2 4.8 37 76-118 254-290 (352)
234 COG2861 Uncharacterized protei 33.5 1.3E+02 0.0027 27.4 5.9 46 68-114 130-178 (250)
235 TIGR03087 stp1 sugar transfera 33.2 49 0.0011 32.6 3.8 39 74-114 92-130 (397)
236 PRK00881 purH bifunctional pho 33.2 1.4E+02 0.0031 30.4 7.0 84 1-98 17-106 (513)
237 PF04558 tRNA_synt_1c_R1: Glut 32.8 72 0.0016 27.2 4.2 24 384-411 109-132 (164)
238 COG0297 GlgA Glycogen synthase 32.6 1.8E+02 0.0038 29.8 7.6 159 268-443 295-470 (487)
239 TIGR03029 EpsG chain length de 32.6 2E+02 0.0043 26.6 7.7 20 2-21 122-141 (274)
240 KOG0853 Glycosyltransferase [C 32.5 30 0.00066 35.0 2.2 58 354-420 380-440 (495)
241 PRK09620 hypothetical protein; 32.3 45 0.00097 30.2 3.1 19 3-21 34-52 (229)
242 TIGR02201 heptsyl_trn_III lipo 31.6 94 0.002 29.9 5.5 36 76-117 252-287 (344)
243 TIGR02853 spore_dpaA dipicolin 31.5 1.2E+02 0.0026 28.5 5.9 20 2-21 14-33 (287)
244 TIGR01285 nifN nitrogenase mol 31.2 1.9E+02 0.0041 29.0 7.6 34 77-115 364-397 (432)
245 PF02951 GSH-S_N: Prokaryotic 31.1 52 0.0011 26.4 2.9 21 2-22 21-41 (119)
246 PRK14501 putative bifunctional 30.9 1.1E+02 0.0023 33.2 6.1 91 329-426 346-443 (726)
247 TIGR00345 arsA arsenite-activa 30.9 1.7E+02 0.0038 27.4 6.9 23 2-24 3-25 (284)
248 PF09314 DUF1972: Domain of un 30.6 80 0.0017 27.5 4.2 38 3-49 25-62 (185)
249 PF06506 PrpR_N: Propionate ca 30.5 50 0.0011 28.4 3.0 39 340-379 31-69 (176)
250 PRK12342 hypothetical protein; 30.3 93 0.002 28.7 4.8 40 76-117 99-144 (254)
251 PRK10353 3-methyl-adenine DNA 30.3 1.9E+02 0.0042 25.2 6.4 76 368-445 22-120 (187)
252 cd01974 Nitrogenase_MoFe_beta 30.1 3.6E+02 0.0079 27.0 9.5 34 77-115 368-401 (435)
253 PRK06732 phosphopantothenate-- 30.0 53 0.0011 29.7 3.2 19 3-21 31-49 (229)
254 cd03412 CbiK_N Anaerobic cobal 29.5 1E+02 0.0022 24.9 4.5 36 266-301 2-39 (127)
255 COG2230 Cfa Cyclopropane fatty 28.9 46 0.001 31.1 2.6 39 351-389 81-121 (283)
256 TIGR00745 apbA_panE 2-dehydrop 28.6 53 0.0012 30.6 3.1 27 3-29 5-31 (293)
257 PRK13982 bifunctional SbtC-lik 28.5 50 0.0011 33.5 2.9 21 2-22 286-306 (475)
258 PHA02754 hypothetical protein; 28.4 1.3E+02 0.0027 20.5 3.8 23 406-430 8-30 (67)
259 COG2910 Putative NADH-flavin r 28.3 57 0.0012 28.5 2.8 19 3-21 15-33 (211)
260 COG4081 Uncharacterized protei 28.1 43 0.00093 27.0 1.9 22 2-23 22-43 (148)
261 COG1255 Uncharacterized protei 27.9 54 0.0012 26.0 2.4 20 1-20 25-44 (129)
262 PF01210 NAD_Gly3P_dh_N: NAD-d 27.9 51 0.0011 27.7 2.5 21 2-22 12-32 (157)
263 PLN02891 IMP cyclohydrolase 27.7 1.6E+02 0.0035 30.1 6.3 83 1-97 35-123 (547)
264 PF06180 CbiK: Cobalt chelatas 27.6 98 0.0021 28.7 4.5 38 266-303 2-42 (262)
265 COG1066 Sms Predicted ATP-depe 27.5 41 0.0009 33.1 2.0 26 1-27 110-135 (456)
266 KOG1250 Threonine/serine dehyd 27.5 3.6E+02 0.0077 26.7 8.2 61 347-411 248-316 (457)
267 PRK03359 putative electron tra 27.3 1E+02 0.0022 28.5 4.5 40 76-117 102-147 (256)
268 PRK08305 spoVFB dipicolinate s 27.2 63 0.0014 28.5 3.0 24 2-25 23-46 (196)
269 PF03853 YjeF_N: YjeF-related 27.0 70 0.0015 27.3 3.3 18 2-19 42-59 (169)
270 cd01422 MGS Methylglyoxal synt 26.8 3.2E+02 0.0069 21.6 7.4 81 1-115 14-107 (115)
271 PRK07525 sulfoacetaldehyde ace 26.8 3E+02 0.0065 28.9 8.5 28 343-370 68-101 (588)
272 COG0300 DltE Short-chain dehyd 26.7 61 0.0013 30.1 2.9 18 3-20 21-38 (265)
273 cd07062 Peptidase_S66_mccF_lik 26.5 1.3E+02 0.0028 28.6 5.3 76 277-373 49-126 (308)
274 PRK14092 2-amino-4-hydroxy-6-h 26.5 1.6E+02 0.0034 25.2 5.1 30 265-294 7-36 (163)
275 TIGR01761 thiaz-red thiazoliny 26.0 4E+02 0.0086 25.8 8.5 62 331-392 52-120 (343)
276 PRK11199 tyrA bifunctional cho 26.0 4E+02 0.0088 26.1 8.8 19 3-21 113-131 (374)
277 PF03808 Glyco_tran_WecB: Glyc 25.9 3.1E+02 0.0068 23.4 7.1 88 2-113 38-130 (172)
278 cd07038 TPP_PYR_PDC_IPDC_like 25.9 3E+02 0.0066 23.1 7.0 27 344-370 60-92 (162)
279 COG3245 CycB Cytochrome c5 [En 25.7 45 0.00098 26.4 1.6 48 360-409 60-122 (126)
280 PF15278 Sec3_C_2: Sec3 exocys 25.6 2.6E+02 0.0055 20.1 5.1 29 398-426 12-40 (86)
281 COG2085 Predicted dinucleotide 25.5 74 0.0016 28.3 3.1 20 3-22 15-34 (211)
282 cd01980 Chlide_reductase_Y Chl 25.5 2.8E+02 0.0061 27.7 7.7 25 88-115 350-374 (416)
283 COG0003 ArsA Predicted ATPase 25.5 3.6E+02 0.0077 25.9 8.0 23 3-25 21-43 (322)
284 PRK02649 ppnK inorganic polyph 25.5 1.3E+02 0.0028 28.6 5.0 50 345-410 70-123 (305)
285 PF07355 GRDB: Glycine/sarcosi 25.3 1.5E+02 0.0033 28.6 5.3 40 74-115 68-117 (349)
286 KOG0832 Mitochondrial/chloropl 25.1 44 0.00096 29.9 1.6 33 88-120 173-207 (251)
287 cd00550 ArsA_ATPase Oxyanion-t 24.9 1.9E+02 0.004 26.6 5.9 22 2-23 18-39 (254)
288 PRK09219 xanthine phosphoribos 24.9 2E+02 0.0042 25.2 5.7 29 88-116 50-80 (189)
289 PRK04885 ppnK inorganic polyph 24.5 1.3E+02 0.0029 27.8 4.8 50 345-410 37-92 (265)
290 TIGR01011 rpsB_bact ribosomal 24.2 74 0.0016 28.7 3.0 34 87-120 154-189 (225)
291 TIGR01012 Sa_S2_E_A ribosomal 24.2 66 0.0014 28.3 2.6 32 88-119 108-141 (196)
292 PF02558 ApbA: Ketopantoate re 24.2 69 0.0015 26.4 2.7 26 3-28 12-37 (151)
293 PRK04020 rps2P 30S ribosomal p 24.0 67 0.0015 28.5 2.6 32 88-119 114-147 (204)
294 TIGR00421 ubiX_pad polyprenyl 24.0 91 0.002 27.1 3.4 26 2-27 16-41 (181)
295 PF00862 Sucrose_synth: Sucros 23.8 1.9E+02 0.0042 29.5 5.9 51 62-115 378-430 (550)
296 PF08030 NAD_binding_6: Ferric 23.8 62 0.0014 26.8 2.3 38 266-303 3-45 (156)
297 CHL00067 rps2 ribosomal protei 23.8 76 0.0016 28.8 3.0 34 87-120 160-195 (230)
298 COG1435 Tdk Thymidine kinase [ 23.6 2E+02 0.0043 25.4 5.3 27 89-115 83-116 (201)
299 PRK05299 rpsB 30S ribosomal pr 23.6 73 0.0016 29.4 2.9 33 87-119 156-190 (258)
300 cd07035 TPP_PYR_POX_like Pyrim 23.5 1E+02 0.0023 25.5 3.7 28 344-371 60-93 (155)
301 cd04951 GT1_WbdM_like This fam 23.3 54 0.0012 31.2 2.1 20 2-21 19-38 (360)
302 PF05728 UPF0227: Uncharacteri 23.2 2E+02 0.0044 25.0 5.5 45 76-120 47-92 (187)
303 COG1484 DnaC DNA replication p 22.9 65 0.0014 29.7 2.4 28 2-29 123-150 (254)
304 TIGR02015 BchY chlorophyllide 22.9 3.9E+02 0.0084 26.7 8.1 25 88-115 355-379 (422)
305 PRK08155 acetolactate synthase 22.6 2E+02 0.0044 29.9 6.3 89 273-370 5-109 (564)
306 TIGR02193 heptsyl_trn_I lipopo 22.4 2.8E+02 0.0061 26.2 6.8 36 76-118 246-282 (319)
307 PRK02155 ppnK NAD(+)/NADH kina 22.2 1.9E+02 0.0041 27.3 5.4 52 341-410 63-118 (291)
308 PF04493 Endonuclease_5: Endon 22.1 1.3E+02 0.0029 26.7 4.1 41 75-115 76-123 (206)
309 cd01141 TroA_d Periplasmic bin 22.0 1.5E+02 0.0033 25.4 4.5 39 75-116 59-99 (186)
310 PRK03094 hypothetical protein; 22.0 90 0.0019 23.0 2.5 20 2-21 11-30 (80)
311 PRK14077 pnk inorganic polypho 21.8 1.8E+02 0.0038 27.5 5.1 53 340-410 63-119 (287)
312 PF04413 Glycos_transf_N: 3-De 21.7 2.5E+02 0.0054 24.4 5.8 36 78-115 87-124 (186)
313 PRK04940 hypothetical protein; 21.5 2.9E+02 0.0064 23.9 6.0 32 88-119 60-92 (180)
314 cd07037 TPP_PYR_MenD Pyrimidin 21.5 86 0.0019 26.6 2.7 27 344-370 61-93 (162)
315 PRK05632 phosphate acetyltrans 21.3 4.3E+02 0.0093 28.4 8.5 33 88-120 76-117 (684)
316 PRK12315 1-deoxy-D-xylulose-5- 21.2 6.7E+02 0.014 26.4 9.7 52 349-409 524-580 (581)
317 COG0569 TrkA K+ transport syst 20.6 84 0.0018 28.3 2.6 20 3-22 14-33 (225)
318 PRK04148 hypothetical protein; 20.3 1E+02 0.0022 25.3 2.8 20 3-22 30-49 (134)
319 PF13460 NAD_binding_10: NADH( 20.2 1E+02 0.0022 26.2 3.1 20 3-22 13-32 (183)
320 PLN02293 adenine phosphoribosy 20.2 2.9E+02 0.0064 24.0 5.8 28 88-115 62-91 (187)
321 TIGR02114 coaB_strep phosphopa 20.2 97 0.0021 28.0 2.9 18 2-19 29-46 (227)
322 TIGR00725 conserved hypothetic 20.1 1.4E+02 0.003 25.3 3.7 41 331-371 79-123 (159)
323 PF03698 UPF0180: Uncharacteri 20.0 1E+02 0.0022 22.7 2.4 21 2-22 11-31 (80)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.8e-70 Score=537.35 Aligned_cols=416 Identities=31% Similarity=0.573 Sum_probs=327.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
|++||++|+++|+.|||++|+.+.... . ...++|+|..+|+++|++.... .+...++..+...+.+.+++
T Consensus 24 ~l~LAk~La~~G~~VT~v~T~~n~~~~--~-------~~~~~i~~~~ip~glp~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (451)
T PLN02410 24 MMQLAKTLHLKGFSITIAQTKFNYFSP--S-------DDFTDFQFVTIPESLPESDFKN-LGPIEFLHKLNKECQVSFKD 93 (451)
T ss_pred HHHHHHHHHcCCCEEEEEeCccccccc--c-------cCCCCeEEEeCCCCCCcccccc-cCHHHHHHHHHHHhHHHHHH
Confidence 689999999999999999999875321 1 0113699999999998752222 23345666566567777777
Q ss_pred HHhCC----CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCC-CCCCCCCCCCCcccCCCC
Q 037999 81 LLMSP----GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGE-LPVTNENFDKPVKCIPGL 155 (447)
Q Consensus 81 ll~~~----~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~~~~~~~~~~p~~ 155 (447)
+|.+. ..+++|||+|.+++|+.++|+++|||++.|++++++.++.+.+++.+...+. .|...... .....+|++
T Consensus 94 ~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iPg~ 172 (451)
T PLN02410 94 CLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKG-QQNELVPEF 172 (451)
T ss_pred HHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCcccccc-CccccCCCC
Confidence 77642 2367999999999999999999999999999999999887766444332221 23222100 112247887
Q ss_pred CcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecccccccccccccc
Q 037999 156 ENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSRIQED 234 (447)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~ 234 (447)
+. ++..+++.+.... ...+...+... ....+++++++|||++||+.++++++... ++++.|||++.....
T Consensus 173 ~~-~~~~dlp~~~~~~--~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~----- 243 (451)
T PLN02410 173 HP-LRCKDFPVSHWAS--LESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA----- 243 (451)
T ss_pred CC-CChHHCcchhcCC--cHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC-----
Confidence 77 7777777543211 12222222222 23467889999999999999999998765 689999999864221
Q ss_pred ccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCC
Q 037999 235 SAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGP 314 (447)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 314 (447)
+ .++++.+++|.+||+.+++++||||||||...++.+++.+++.+|+.++++|||+++.+..........
T Consensus 244 -----~-----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~ 313 (451)
T PLN02410 244 -----P-----TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIES 313 (451)
T ss_pred -----C-----ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhc
Confidence 1 122234557899999988899999999999999999999999999999999999998532110011124
Q ss_pred CChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 315 VPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
+|++|.+|.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.+
T Consensus 314 lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 314 LPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999888899999987
Q ss_pred CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 395 TCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
.+++++|+++|+++|+ +++++||++|+++++++++++.+||||++|+++||+
T Consensus 394 ~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~ 446 (451)
T PLN02410 394 DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVH 446 (451)
T ss_pred cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 8999999999999997 446899999999999999999999999999999986
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=4.1e-69 Score=534.03 Aligned_cols=430 Identities=30% Similarity=0.512 Sum_probs=335.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCC---CCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGF---YKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLA 77 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~---~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (447)
|++||++|+.+|..|||++|+.++.++.+.....+. ....+.++|..+|+++|++.. ...++..++..+...+.+.
T Consensus 24 ml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~-~~~~~~~~~~~~~~~~~~~ 102 (480)
T PLN02555 24 LLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDP-RRQDLDLYLPQLELVGKRE 102 (480)
T ss_pred HHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCcc-cccCHHHHHHHHHHhhhHH
Confidence 689999999999999999999887766531100000 011234788888988887632 2234555666666567888
Q ss_pred HHHHHhCC---CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCC
Q 037999 78 FLQLLMSP---GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPG 154 (447)
Q Consensus 78 l~~ll~~~---~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~ 154 (447)
++++|++. ..+++|||+|.+++|+.++|+++|||.++|+++++++++.+++++ .+..|............+|+
T Consensus 103 l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~iPg 178 (480)
T PLN02555 103 IPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY----HGLVPFPTETEPEIDVQLPC 178 (480)
T ss_pred HHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh----hcCCCcccccCCCceeecCC
Confidence 88888753 224599999999999999999999999999999999988777653 22222221110111224788
Q ss_pred CCcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhccCeeEEecccccccccccccc
Q 037999 155 LENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQED 234 (447)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~ 234 (447)
++. ++.++++.++..........+.+.+......+++++++|||++||+.+++.++...| ++.|||++........
T Consensus 179 lp~-l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~~-- 254 (480)
T PLN02555 179 MPL-LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPNS-- 254 (480)
T ss_pred CCC-cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCccccccc--
Confidence 877 888899876643222334444455555666788999999999999999999987656 9999999753211000
Q ss_pred ccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCC
Q 037999 235 SAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGP 314 (447)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 314 (447)
..+ .+.++.+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++......+.....
T Consensus 255 ---~~~-----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~ 326 (480)
T PLN02555 255 ---DVK-----GDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHV 326 (480)
T ss_pred ---ccc-----ccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhc
Confidence 001 222345678999999988889999999999999999999999999999999999997431100001125
Q ss_pred CChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-
Q 037999 315 VPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK- 393 (447)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~- 393 (447)
+|+++.++.++|+++++|+||.+||.|+++++|||||||||++||+++|||||++|+++||+.|++++++.||+|+.+.
T Consensus 327 lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~ 406 (480)
T PLN02555 327 LPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCR 406 (480)
T ss_pred CChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccC
Confidence 7888888889999999999999999999999999999999999999999999999999999999999999899999993
Q ss_pred -----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 394 -----DTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 394 -----~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+.+++++|.++|+++|+ ++++++|+||++|++++++|+++||||++|+++||++
T Consensus 407 ~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~ 466 (480)
T PLN02555 407 GEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDK 466 (480)
T ss_pred CccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 35899999999999996 5678999999999999999999999999999999974
No 3
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.6e-68 Score=525.63 Aligned_cols=411 Identities=25% Similarity=0.468 Sum_probs=323.6
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
|++||++|+++|+.|||++|+.+..++.... .++|+|+.+|+++|++......++..++..+...+.+.+++
T Consensus 22 ~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~--------~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (449)
T PLN02173 22 IRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP--------SSPISIATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVAD 93 (449)
T ss_pred HHHHHHHHHcCCCEEEEEECCchhhhcccCC--------CCCEEEEEcCCCCCCcccccccCHHHHHHHHHHhhhHHHHH
Confidence 6899999999999999999998776653321 12699999999998742222335666777777678889999
Q ss_pred HHhCC---CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCCCc
Q 037999 81 LLMSP---GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGLEN 157 (447)
Q Consensus 81 ll~~~---~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~ 157 (447)
+|.+. ..+.+|||+|.+++|+.++|+++|||++.|++++++....+++ ... ..+ . ....+|+++.
T Consensus 94 ~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~~~-------~---~~~~~pg~p~ 161 (449)
T PLN02173 94 IIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-NNG-------S---LTLPIKDLPL 161 (449)
T ss_pred HHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-ccC-------C---ccCCCCCCCC
Confidence 98763 1234999999999999999999999999999999888765543 211 100 0 0112577776
Q ss_pred ccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhccCeeEEecccccccc-cccccccc
Q 037999 158 FFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLK-SRIQEDSA 236 (447)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~-~~~~~~~~ 236 (447)
++..+++.++......+.....+.+.+....+++++++|||++||++++++++.. ++++.|||+++... ....
T Consensus 162 -l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~---- 235 (449)
T PLN02173 162 -LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQI---- 235 (449)
T ss_pred -CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccc----
Confidence 7778888766432222334444555566677899999999999999999999765 46999999975311 0000
Q ss_pred CCCCCCCCCCCCc--cccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCC
Q 037999 237 ESSPPESNNCVLS--KEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGP 314 (447)
Q Consensus 237 ~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 314 (447)
... ...+.++| ..+++|.+||+.+++++||||||||+..++.+++.+++.+| ++.+|+|+++.+. ...
T Consensus 236 -~~~-~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~------~~~ 305 (449)
T PLN02173 236 -KSD-NDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE------ESK 305 (449)
T ss_pred -ccc-ccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc------hhc
Confidence 000 00001233 23456999999998899999999999999999999999999 6788999997531 124
Q ss_pred CChhhhhhc-CCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 315 VPVELEQGT-KERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 315 ~~~~~~~~~-~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
+|+++.++. ++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 306 lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 306 LPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred ccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 788888777 6889999999999999999999999999999999999999999999999999999999998889999885
Q ss_pred -C----CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 394 -D----TCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 394 -~----~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+ .++.++|+++|+++|. ++++++|+||+++++++++|+++||||++|+++|+++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~ 445 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSK 445 (449)
T ss_pred ecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 2 3699999999999997 5578999999999999999999999999999999874
No 4
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-67 Score=522.68 Aligned_cols=415 Identities=26% Similarity=0.426 Sum_probs=326.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
|++||+.|+++|++|||++++.+.+++.+... ..++|+|+.+|++++.+. ..++..++..+...+.+.+++
T Consensus 23 mL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~------~~~~i~~v~lp~g~~~~~---~~~~~~l~~a~~~~~~~~l~~ 93 (448)
T PLN02562 23 MLKLASAFLSRGFEPVVITPEFIHRRISATLD------PKLGITFMSISDGQDDDP---PRDFFSIENSMENTMPPQLER 93 (448)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhhhccC------CCCCEEEEECCCCCCCCc---cccHHHHHHHHHHhchHHHHH
Confidence 68999999999999999999998776654311 113699999998876432 223444455555467888899
Q ss_pred HHhCCC--CCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCC-CCCCcccCCCCCc
Q 037999 81 LLMSPG--LLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEN-FDKPVKCIPGLEN 157 (447)
Q Consensus 81 ll~~~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~~~~~~p~~~~ 157 (447)
++++.. .+++|||+|.+++|+.++|+++|||++.|++++++..+.+++++.....++.+..+.. ....+..+|+++.
T Consensus 94 ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~ 173 (448)
T PLN02562 94 LLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPL 173 (448)
T ss_pred HHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCC
Confidence 887632 2468999999999999999999999999999999888776665543333322211100 1112235788876
Q ss_pred ccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHh-----hccCeeEEecccccccccccc
Q 037999 158 FFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLG-----SRLTKIYTVGPLHALLKSRIQ 232 (447)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~-----~~~p~v~~vGpl~~~~~~~~~ 232 (447)
++.++++.++..........+.+.+..+...+++++++|||.+||+.+++..+ +..|+++.|||++......
T Consensus 174 -l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~-- 250 (448)
T PLN02562 174 -LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT-- 250 (448)
T ss_pred -CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccc--
Confidence 78888887654322222334455555666778899999999999999888765 3458999999998643210
Q ss_pred ccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCC
Q 037999 233 EDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFI-KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPG 311 (447)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 311 (447)
... .+.+..+.+|.+||+.+++++||||||||+. .++.+++.+++.+|++++++|||+++.+.
T Consensus 251 -----~~~-----~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~------ 314 (448)
T PLN02562 251 -----ITK-----PSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW------ 314 (448)
T ss_pred -----cCC-----CccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc------
Confidence 000 1222345678999999888899999999986 67899999999999999999999997421
Q ss_pred CCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeE
Q 037999 312 VGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD 391 (447)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 391 (447)
...+|++|.++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 394 (448)
T PLN02562 315 REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVR 394 (448)
T ss_pred hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeE
Confidence 12478888888999999999999999999999999999999999999999999999999999999999999877899998
Q ss_pred eCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 392 MKDTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 392 ~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+ +.+++++|+++|+++|++ ++||+||++++++++++ .+||||++|+++||++
T Consensus 395 ~-~~~~~~~l~~~v~~~l~~--~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~ 446 (448)
T PLN02562 395 I-SGFGQKEVEEGLRKVMED--SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDE 446 (448)
T ss_pred e-CCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHH
Confidence 8 568999999999999988 89999999999999888 6789999999999974
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-67 Score=520.72 Aligned_cols=421 Identities=25% Similarity=0.424 Sum_probs=318.9
Q ss_pred CHHHHHHHHhCC--CEEEEEeCCcch-hhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhh---
Q 037999 1 MLTLAELFSHAG--FRVTFVNTEQYH-DRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVS--- 74 (447)
Q Consensus 1 ~l~La~~La~rG--h~VT~~t~~~~~-~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~--- 74 (447)
|++||++|+++| +.|||++++.++ ..+.+.... .....++|+|+.+|+..+........+...++......+
T Consensus 20 ~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~--~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (468)
T PLN02207 20 FLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKS--IASSQPFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPL 97 (468)
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhh--ccCCCCCeEEEEeCCCCCCCccccccCHHHHHHHHHHhcchh
Confidence 689999999998 999999998765 222211000 001123699999996432111011234444443333344
Q ss_pred -HHHHHHHHhCCC---CCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhC-CCCCCCCCCCCCc
Q 037999 75 -KLAFLQLLMSPG---LLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEG-ELPVTNENFDKPV 149 (447)
Q Consensus 75 -~~~l~~ll~~~~---~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~~~~~~ 149 (447)
.+.+.+++.+.. ++++|||+|.+++|+.++|+++|||.+.|+++++++.+.+.+.+...... ..+.... ...
T Consensus 98 ~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 174 (468)
T PLN02207 98 VRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNS---EEM 174 (468)
T ss_pred HHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCC---CCe
Confidence 445666665421 23599999999999999999999999999999998888766554321110 0110000 122
Q ss_pred ccCCCC-CcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhh--ccCeeEEecccccc
Q 037999 150 KCIPGL-ENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGS--RLTKIYTVGPLHAL 226 (447)
Q Consensus 150 ~~~p~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~--~~p~v~~vGpl~~~ 226 (447)
..+|++ +. +...+++.++.... . ...+.+......+++++|+||+++||+++++.++. ..|+++.|||++..
T Consensus 175 ~~vPgl~~~-l~~~dlp~~~~~~~---~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~ 249 (468)
T PLN02207 175 LSIPGFVNP-VPANVLPSALFVED---G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDL 249 (468)
T ss_pred EECCCCCCC-CChHHCcchhcCCc---c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccc
Confidence 357888 56 88888887654221 1 23334445566789999999999999999999954 56899999999864
Q ss_pred ccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC
Q 037999 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (447)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 306 (447)
... ..+. .+.+ .+++|.+||+.+++++||||||||...++.+++++++.+|+.++++|||+++.+..
T Consensus 250 ~~~--------~~~~----~~~~-~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~ 316 (468)
T PLN02207 250 KAQ--------PHPE----QDLA-RRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV 316 (468)
T ss_pred ccC--------CCCc----cccc-hhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 321 1110 0111 34679999999888999999999999999999999999999999999999985321
Q ss_pred CCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhc
Q 037999 307 DGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIW 386 (447)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~ 386 (447)
.....+|++|.++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 317 ---~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~ 393 (468)
T PLN02207 317 ---TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKEL 393 (468)
T ss_pred ---cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHh
Confidence 11225889999999999999999999999999999999999999999999999999999999999999999988878
Q ss_pred ceeeEeC--------CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 387 KIGLDMK--------DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 387 g~g~~~~--------~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
|+|+.+. +.+++++|+++|+++|++++++||+||+++++++++|+.+||||++|+++||++
T Consensus 394 gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~ 462 (468)
T PLN02207 394 KLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHD 462 (468)
T ss_pred CceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 9999773 245999999999999984458999999999999999999999999999999974
No 6
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.7e-67 Score=517.69 Aligned_cols=417 Identities=27% Similarity=0.451 Sum_probs=322.6
Q ss_pred CHHHHHHHHh-CCCEEEEEeCCcc-hhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 1 MLTLAELFSH-AGFRVTFVNTEQY-HDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 1 ~l~La~~La~-rGh~VT~~t~~~~-~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
|++||++|++ +|+.|||++|+.+ .+.+.+.. ...++++|+.+++++|.+......+...++..+...+.+.+
T Consensus 20 ~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~------~~~~~i~~~~i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l 93 (455)
T PLN02152 20 SLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH------NNVENLSFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKAL 93 (455)
T ss_pred HHHHHHHHhhCCCcEEEEEeccchhhhhhhccC------CCCCCEEEEEcCCCCCCccccccccHHHHHHHHHHhccHHH
Confidence 6899999996 7999999999865 33222210 11236999999999987632223455556666666778888
Q ss_pred HHHHhCC---CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCC
Q 037999 79 LQLLMSP---GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGL 155 (447)
Q Consensus 79 ~~ll~~~---~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~ 155 (447)
++++.+. +.+++|||+|.+++|+.++|+++|||.+.|+++++++++.++++... . . ....+|++
T Consensus 94 ~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~----~----~-----~~~~iPgl 160 (455)
T PLN02152 94 SDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG----N----N-----SVFEFPNL 160 (455)
T ss_pred HHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc----C----C-----CeeecCCC
Confidence 8888763 23569999999999999999999999999999999998877654321 0 0 12247787
Q ss_pred CcccccCCCCCcccCCCCCchHHHHHHHHhhhcc--cCceEEeccccccchHHHHHHhhccCeeEEeccccccccccccc
Q 037999 156 ENFFRNRDLPSICRDGGPDDPILQTFIRDTSATT--RTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQE 233 (447)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~ 233 (447)
+. ++.+++|.++........+.+.+.+..+... .++++++|||++||+.++++++. .+++.|||+++.......
T Consensus 161 p~-l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~--~~v~~VGPL~~~~~~~~~- 236 (455)
T PLN02152 161 PS-LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN--IEMVAVGPLLPAEIFTGS- 236 (455)
T ss_pred CC-CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc--CCEEEEcccCcccccccc-
Confidence 77 7888888776432222223333334444332 24699999999999999999875 369999999753210000
Q ss_pred cccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC---CC
Q 037999 234 DSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG---EP 310 (447)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~ 310 (447)
..+ ++.++++.+.+|.+||+.+++++||||||||+..++.+++++++.+|+.++++|||+++.+.... ++
T Consensus 237 ----~~~---~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~ 309 (455)
T PLN02152 237 ----ESG---KDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEG 309 (455)
T ss_pred ----ccC---ccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccc
Confidence 000 00112233567999999988889999999999999999999999999999999999998531100 00
Q ss_pred C---CCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcc
Q 037999 311 G---VGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (447)
Q Consensus 311 ~---~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 387 (447)
. ...++++|.++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||
T Consensus 310 ~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~ 389 (455)
T PLN02152 310 EEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWK 389 (455)
T ss_pred ccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhC
Confidence 0 0124678888899999999999999999999999999999999999999999999999999999999999988778
Q ss_pred eeeEeC----CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 388 IGLDMK----DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 388 ~g~~~~----~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+|+.+. +.+++++|+++|+++|++++.+||+||+++++++++++.+||||++|+++||++
T Consensus 390 ~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~ 453 (455)
T PLN02152 390 TGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKT 453 (455)
T ss_pred ceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 887774 246999999999999987667899999999999999999999999999999974
No 7
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.8e-66 Score=515.54 Aligned_cols=429 Identities=27% Similarity=0.412 Sum_probs=322.4
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC----CCCCCCCCCC---cccHHHHHHhHhhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP----DGLPPDNPRF---GIYIKDWFCSDKPV 73 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp----~~l~~~~~~~---~~~~~~~~~~~~~~ 73 (447)
|++||+.|+.+|+.|||++|+.++.++.+... ..++++++.+| +++|.+.... ..+....+......
T Consensus 26 ~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~------~~~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~~ 99 (477)
T PLN02863 26 LLDLTHRLALRGLTITVLVTPKNLPFLNPLLS------KHPSIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGE 99 (477)
T ss_pred HHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc------cCCCeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHHHH
Confidence 68999999999999999999999887765311 12357777654 2555542111 11222334444446
Q ss_pred hHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCC
Q 037999 74 SKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIP 153 (447)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p 153 (447)
+.+.+.++|.+...+++|||+|.+++|+.++|+++|||++.||+++++.++.++++....+....+ ......-.+..+|
T Consensus 100 ~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iP 178 (477)
T PLN02863 100 LYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINP-DDQNEILSFSKIP 178 (477)
T ss_pred hHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccc-cccccccccCCCC
Confidence 677888888764347899999999999999999999999999999999999877654311100000 0100011123478
Q ss_pred CCCcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc--CeeEEeccccccccccc
Q 037999 154 GLENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL--TKIYTVGPLHALLKSRI 231 (447)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~--p~v~~vGpl~~~~~~~~ 231 (447)
+++. +...+++.++......+.....+.+.......++++++|||++||++++++++..+ ++++.|||+++......
T Consensus 179 g~~~-~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~ 257 (477)
T PLN02863 179 NCPK-YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKS 257 (477)
T ss_pred CCCC-cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccc
Confidence 8877 88888887665332233344444444444566788999999999999999998865 68999999975321000
Q ss_pred cccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCC
Q 037999 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPG 311 (447)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 311 (447)
... ..+ .+.+..+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+.... ..
T Consensus 258 ~~~---~~~-----~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~-~~ 328 (477)
T PLN02863 258 GLM---ERG-----GPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE-SD 328 (477)
T ss_pred ccc---ccC-----CcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc-cc
Confidence 000 000 111113567999999988899999999999999999999999999999999999997532110 11
Q ss_pred CCCCChhhhhhcCCCe-eEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceee
Q 037999 312 VGPVPVELEQGTKERG-CIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGL 390 (447)
Q Consensus 312 ~~~~~~~~~~~~~~~~-~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~ 390 (447)
...+|++|.++..++. ++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++++++||+|+
T Consensus 329 ~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~ 408 (477)
T PLN02863 329 YSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAV 408 (477)
T ss_pred hhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeE
Confidence 1247888877765544 455999999999999999999999999999999999999999999999999999888799999
Q ss_pred EeC----CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 391 DMK----DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 391 ~~~----~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
++. ..++.+++.++|+++|. ++++||+||+++++++++|+.+||||++|+++||++
T Consensus 409 ~~~~~~~~~~~~~~v~~~v~~~m~-~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~ 468 (477)
T PLN02863 409 RVCEGADTVPDSDELARVFMESVS-ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKH 468 (477)
T ss_pred EeccCCCCCcCHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 994 24689999999999995 238999999999999999999999999999999973
No 8
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=3.2e-66 Score=513.56 Aligned_cols=416 Identities=28% Similarity=0.465 Sum_probs=320.7
Q ss_pred CHHHHHH--HHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 1 MLTLAEL--FSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 1 ~l~La~~--La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
|++||++ |++||++|||++++.+++++.+... ..+.+++..+|+++|++.. .+...++..+...+.+.+
T Consensus 25 ~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~------~~~~~~~~~~~~glp~~~~---~~~~~~~~~~~~~~~~~l 95 (456)
T PLN02210 25 MLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEK------PRRPVDLVFFSDGLPKDDP---RAPETLLKSLNKVGAKNL 95 (456)
T ss_pred HHHHHHHHHhhcCCcEEEEEeccchhhhhccccC------CCCceEEEECCCCCCCCcc---cCHHHHHHHHHHhhhHHH
Confidence 6899999 5699999999999998777643211 1236888888988887631 234456666666677788
Q ss_pred HHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCCCcc
Q 037999 79 LQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGLENF 158 (447)
Q Consensus 79 ~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~ 158 (447)
++++.+. ++||||+|.+++|+..+|+++|||.+.|++++++.++.+.+++.. ....+... +.. ....+|+++.
T Consensus 96 ~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~Pgl~~- 168 (456)
T PLN02210 96 SKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TNSFPDLE-DLN-QTVELPALPL- 168 (456)
T ss_pred HHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cCCCCccc-ccC-CeeeCCCCCC-
Confidence 8888765 799999999999999999999999999999999988876654321 11112110 001 1224777776
Q ss_pred cccCCCCCcccCCCCCchHHHHHH-HHhhhcccCceEEeccccccchHHHHHHhhccCeeEEecccccccc--ccccccc
Q 037999 159 FRNRDLPSICRDGGPDDPILQTFI-RDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLK--SRIQEDS 235 (447)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~~~--~~~~~~~ 235 (447)
+...+++.++... ......... +.......++++++|||++||++++++++.. +++++|||+++... ... .+
T Consensus 169 ~~~~dl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~-~~- 243 (456)
T PLN02210 169 LEVRDLPSFMLPS--GGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDE-EE- 243 (456)
T ss_pred CChhhCChhhhcC--CchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCccc-cc-
Confidence 7778887655432 122222222 2223455678999999999999999998874 68999999975210 000 00
Q ss_pred cCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCC
Q 037999 236 AESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPV 315 (447)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 315 (447)
...+ .+.++|..+++|.+||+.+++++||||||||....+.+++.+++.+|+.++++|||+++.+... ..
T Consensus 244 -~~~~---~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~------~~ 313 (456)
T PLN02210 244 -TLDG---KNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKA------QN 313 (456)
T ss_pred -cccc---ccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccc------cc
Confidence 0000 0123455677899999998889999999999999999999999999999999999999743111 12
Q ss_pred Chhhhhhc-CCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-
Q 037999 316 PVELEQGT-KERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK- 393 (447)
Q Consensus 316 ~~~~~~~~-~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~- 393 (447)
+.++.++. ++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.
T Consensus 314 ~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~ 393 (456)
T PLN02210 314 VQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRN 393 (456)
T ss_pred hhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEec
Confidence 34455555 4788889999999999999999999999999999999999999999999999999999987789999985
Q ss_pred ----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 394 ----DTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 394 ----~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+.+++++|+++|+++|. +++++||+||++|++.+++|+++||||++|+++||++
T Consensus 394 ~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 394 DAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred cccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 25899999999999997 4567899999999999999999999999999999863
No 9
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.5e-66 Score=511.70 Aligned_cols=412 Identities=28% Similarity=0.452 Sum_probs=318.8
Q ss_pred CHHHHHHHH-hCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCC----CCCCCCCCCcccHHHHHHhHhhhhH
Q 037999 1 MLTLAELFS-HAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPD----GLPPDNPRFGIYIKDWFCSDKPVSK 75 (447)
Q Consensus 1 ~l~La~~La-~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~----~l~~~~~~~~~~~~~~~~~~~~~~~ 75 (447)
|++||++|+ ++|++|||++++.+..++.+.... .++|+++.+|. ++|+.. .+....+......+.
T Consensus 22 ~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~------~~~i~~~~lp~p~~~glp~~~----~~~~~~~~~~~~~~~ 91 (481)
T PLN02992 22 VIELGKRLSANHGFHVTVFVLETDAASAQSKFLN------STGVDIVGLPSPDISGLVDPS----AHVVTKIGVIMREAV 91 (481)
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCchhhhhhcccc------CCCceEEECCCccccCCCCCC----ccHHHHHHHHHHHhH
Confidence 689999998 799999999999887665332111 12688988884 454221 122233333444567
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCC
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGL 155 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~ 155 (447)
+.++++|.+...+++|||+|.+++|+.++|+++|||++.|+++++++++.+.+++........+. ........+|++
T Consensus 92 ~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~---~~~~~~~~iPg~ 168 (481)
T PLN02992 92 PTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEH---TVQRKPLAMPGC 168 (481)
T ss_pred HHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccccc---ccCCCCcccCCC
Confidence 88888887644478999999999999999999999999999999988876655443211100000 000112347888
Q ss_pred CcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhc-------cCeeEEecccccccc
Q 037999 156 ENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHALLK 228 (447)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~~~~ 228 (447)
+. ++..+++..+... .......+.+......+++++++|||++||+.++++++.. -++++.|||++....
T Consensus 169 ~~-l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 245 (481)
T PLN02992 169 EP-VRFEDTLDAYLVP--DEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ 245 (481)
T ss_pred Cc-cCHHHhhHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC
Confidence 77 7777777533221 2233444455555667889999999999999999998752 157999999975311
Q ss_pred ccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 037999 229 SRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG 308 (447)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 308 (447)
.. ..+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+....
T Consensus 246 -----------------~~--~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 246 -----------------SS--KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred -----------------CC--cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 11 13556999999988899999999999999999999999999999999999997531100
Q ss_pred --------------CCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccc
Q 037999 309 --------------EPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIG 373 (447)
Q Consensus 309 --------------~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~ 373 (447)
+.....+|++|.+|..++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~ 386 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFA 386 (481)
T ss_pred cccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccc
Confidence 0001247889999988777666 9999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhcceeeEeC---CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHhC
Q 037999 374 DQQVNSRCVSEIWKIGLDMK---DTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVK--EGGSSYRNLDKLIKA 447 (447)
Q Consensus 374 DQ~~na~~~~~~~g~g~~~~---~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~--~~gs~~~~~~~~~~~ 447 (447)
||+.||+++++++|+|+.++ +.++.++|+++|+++|. +++++||++++++++++++|++ +||||++|+++|+++
T Consensus 387 DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~ 466 (481)
T PLN02992 387 EQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKE 466 (481)
T ss_pred hhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH
Confidence 99999999976689999996 25899999999999997 4578999999999999999994 599999999999863
No 10
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=8.8e-66 Score=505.92 Aligned_cols=421 Identities=25% Similarity=0.384 Sum_probs=322.2
Q ss_pred CHHHHHHHHhC-CCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHH
Q 037999 1 MLTLAELFSHA-GFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFL 79 (447)
Q Consensus 1 ~l~La~~La~r-Gh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (447)
|++||+.|+++ |..|||++++.+...+...... ......++|+|+.+|.....+-.....+....+......+.+.++
T Consensus 20 ~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~-~~~~~~~~i~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 98 (470)
T PLN03015 20 ILELGNRLSSVLNIHVTILAVTSGSSSPTETEAI-HAAAARTTCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVR 98 (470)
T ss_pred HHHHHHHHHhCCCCeEEEEECCCchhhhcccccc-ccccCCCceEEEECCCCccccCCCCCccHHHHHHHHHHhchHHHH
Confidence 68999999987 9999999988766544211100 000011259999998533222000011333334445557889999
Q ss_pred HHHhCCCCCCcEEEECCCcchHHHHHHHcCCC-eEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCCCcc
Q 037999 80 QLLMSPGLLPTCIISDSIMSFTIDVAEELNIP-IITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGLENF 158 (447)
Q Consensus 80 ~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP-~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~ 158 (447)
++|++...+++|||+|.+++|+.++|+++||| .+.|++++++....+++++.... ..+........ ...+|+++.
T Consensus 99 ~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~--~~~~~~~~~~~-~~~vPg~p~- 174 (470)
T PLN03015 99 DAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT--VVEGEYVDIKE-PLKIPGCKP- 174 (470)
T ss_pred HHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc--ccccccCCCCC-eeeCCCCCC-
Confidence 99987544789999999999999999999999 58888888887766666554211 11110001111 234788887
Q ss_pred cccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhc-------cCeeEEeccccccccccc
Q 037999 159 FRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHALLKSRI 231 (447)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~~~~~~~ 231 (447)
+...+++..+... .........+......+++++++|||++||+.+++.++.. .++++.|||++...
T Consensus 175 l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~---- 248 (470)
T PLN03015 175 VGPKELMETMLDR--SDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTN---- 248 (470)
T ss_pred CChHHCCHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCc----
Confidence 8888888654322 1222334445555577899999999999999999999874 25699999998421
Q ss_pred cccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC-----
Q 037999 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI----- 306 (447)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~----- 306 (447)
.. . ..+++|.+|||.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+..
T Consensus 249 -------~~-----~---~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~ 313 (470)
T PLN03015 249 -------VH-----V---EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGAS 313 (470)
T ss_pred -------cc-----c---cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccc
Confidence 01 0 123479999999888999999999999999999999999999999999999985321
Q ss_pred --CCCCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHH
Q 037999 307 --DGEPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVS 383 (447)
Q Consensus 307 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~ 383 (447)
+.+.....+|++|.+|..++++++ +|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||++++
T Consensus 314 ~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~ 393 (470)
T PLN03015 314 SSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT 393 (470)
T ss_pred cccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHH
Confidence 000112258899999998888766 99999999999999999999999999999999999999999999999999998
Q ss_pred hhcceeeEeC-----CCCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 384 EIWKIGLDMK-----DTCDRSTIENLVRDLMD---NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 384 ~~~g~g~~~~-----~~~~~~~l~~ai~~~l~---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+.||+|+.+. +.+++++|+++|+++|. ++++++|+||+++++++++|+++||||++|+++|+++
T Consensus 394 ~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~ 465 (470)
T PLN03015 394 EEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKR 465 (470)
T ss_pred HHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Confidence 8899999994 36899999999999994 5689999999999999999999999999999999864
No 11
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-65 Score=509.97 Aligned_cols=427 Identities=30% Similarity=0.483 Sum_probs=315.2
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC-----CCCCCCCCCCc--c--cHHHHHHhHh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP-----DGLPPDNPRFG--I--YIKDWFCSDK 71 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp-----~~l~~~~~~~~--~--~~~~~~~~~~ 71 (447)
|++||+.|+++|+.|||++|+.+..++.+.... ...... .|+|+.+| +++|++..... . ++...+....
T Consensus 25 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~-~~~~~~-~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~ 102 (491)
T PLN02534 25 MIDMARLLAERGVIVSLVTTPQNASRFAKTIDR-ARESGL-PIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV 102 (491)
T ss_pred HHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhh-ccccCC-CeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHH
Confidence 689999999999999999999987766543211 000111 38999997 68887532111 1 2222233344
Q ss_pred hhhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCccc
Q 037999 72 PVSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKC 151 (447)
Q Consensus 72 ~~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~ 151 (447)
..+.+.++++|.+...+++|||+|.+++|+.++|+++|||+++|++++++..+.++++.... ...+.... .....
T Consensus 103 ~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~--~~~~~~~~---~~~~~ 177 (491)
T PLN02534 103 DKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHN--AHLSVSSD---SEPFV 177 (491)
T ss_pred HHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhc--ccccCCCC---Cceee
Confidence 45778899998764447899999999999999999999999999999998877654432211 11111111 11223
Q ss_pred CCCCCc--ccccCCCCCcccCCCCCchHHHHHHHHhhh-cccCceEEeccccccchHHHHHHhhcc-CeeEEeccccccc
Q 037999 152 IPGLEN--FFRNRDLPSICRDGGPDDPILQTFIRDTSA-TTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALL 227 (447)
Q Consensus 152 ~p~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~ 227 (447)
+|+++. .++..+++.++.... ....+...+.. ...++++++|||++||+.++++++... ++++.|||++...
T Consensus 178 iPg~p~~~~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~ 253 (491)
T PLN02534 178 VPGMPQSIEITRAQLPGAFVSLP----DLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCN 253 (491)
T ss_pred cCCCCccccccHHHCChhhcCcc----cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccc
Confidence 566653 255566665432211 12222322322 245779999999999999999998765 6899999997532
Q ss_pred cccccccccCCCCCCCCCCCCcc-ccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC
Q 037999 228 KSRIQEDSAESSPPESNNCVLSK-EDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (447)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 306 (447)
.... + ... . .+.+. ++++|.+||+.+++++||||||||...+..+++.+++.+|+.++++|||+++.+..
T Consensus 254 ~~~~--~---~~~---~-~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~ 324 (491)
T PLN02534 254 KRNL--D---KFE---R-GNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEK 324 (491)
T ss_pred cccc--c---ccc---c-CCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCcc
Confidence 1100 0 000 0 01111 23569999999988999999999999999999999999999999999999984311
Q ss_pred CCCCCCCCCChhhhhhcC-CCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhh
Q 037999 307 DGEPGVGPVPVELEQGTK-ERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEI 385 (447)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~ 385 (447)
..+.....+|++|.++.. .++++.+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.
T Consensus 325 ~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~ 404 (491)
T PLN02534 325 HSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEV 404 (491)
T ss_pred ccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHh
Confidence 100011136788887754 4555569999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEeC-------------C-CCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 386 WKIGLDMK-------------D-TCDRSTIENLVRDLMD---NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 386 ~g~g~~~~-------------~-~~~~~~l~~ai~~~l~---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
||+|+++. + .+++++|+++|+++|. ++++++|+||++|++++++++.+||||++|+++||++
T Consensus 405 ~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~ 483 (491)
T PLN02534 405 LRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQD 483 (491)
T ss_pred hcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999883 0 3789999999999995 5678999999999999999999999999999999974
No 12
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.7e-65 Score=511.52 Aligned_cols=420 Identities=27% Similarity=0.453 Sum_probs=322.8
Q ss_pred CHHHHHHHHhCC----CEEEEEeCCcchh----hhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhh
Q 037999 1 MLTLAELFSHAG----FRVTFVNTEQYHD----RLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKP 72 (447)
Q Consensus 1 ~l~La~~La~rG----h~VT~~t~~~~~~----~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~ 72 (447)
|++||++|+.+| +.|||++++.+.. ++.+.... .. ...++|+|+.+|++.++.. ..+...++..+..
T Consensus 20 ~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~~lp~~~~p~~---~e~~~~~~~~~~~ 94 (480)
T PLN00164 20 MLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRR-EA-ASGLDIRFHHLPAVEPPTD---AAGVEEFISRYIQ 94 (480)
T ss_pred HHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhh-cc-cCCCCEEEEECCCCCCCCc---cccHHHHHHHHHH
Confidence 689999999997 8999999876532 23221000 00 0111599999997643321 1133355555666
Q ss_pred hhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccC
Q 037999 73 VSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCI 152 (447)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 152 (447)
.+.+.++++|.+...+++|||+|.+++|+.++|+++|||++.|+++++++++.+.+++........+... ... ...+
T Consensus 95 ~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~i 171 (480)
T PLN00164 95 LHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEE--MEG-AVDV 171 (480)
T ss_pred hhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccc--cCc-ceec
Confidence 7888899998765336799999999999999999999999999999999988877654421110001111 111 1237
Q ss_pred CCCCcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhc-------cCeeEEeccccc
Q 037999 153 PGLENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHA 225 (447)
Q Consensus 153 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~-------~p~v~~vGpl~~ 225 (447)
|+++. ++..+++.++... .+.....+....+...+++++++|||++||+.++++++.. .|+++.|||++.
T Consensus 172 PGlp~-l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~ 248 (480)
T PLN00164 172 PGLPP-VPASSLPAPVMDK--KSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVIS 248 (480)
T ss_pred CCCCC-CChHHCCchhcCC--CcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCcc
Confidence 88877 8888888755432 1222333444445567889999999999999999999864 268999999985
Q ss_pred cccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCC
Q 037999 226 LLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDL 305 (447)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 305 (447)
.... + . ....+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+.
T Consensus 249 ~~~~----------~-----~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~ 312 (480)
T PLN00164 249 LAFT----------P-----P-AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPP 312 (480)
T ss_pred cccc----------C-----C-CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 3211 0 1 1124567999999998899999999999999999999999999999999999998532
Q ss_pred CC------CCCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHH
Q 037999 306 ID------GEPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVN 378 (447)
Q Consensus 306 ~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n 378 (447)
.. +.+....+|++|.++..++++++ +|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~N 392 (480)
T PLN00164 313 AAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLN 392 (480)
T ss_pred ccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhH
Confidence 10 00111247889988888888777 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEeC-C-----CCCHHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 379 SRCVSEIWKIGLDMK-D-----TCDRSTIENLVRDLMDN---KRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 379 a~~~~~~~g~g~~~~-~-----~~~~~~l~~ai~~~l~~---~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
|+++++.+|+|+.+. + .+++++|+++|+++|.+ +++.+|++|+++++++++++++||||++++++|+++
T Consensus 393 a~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~ 470 (480)
T PLN00164 393 AFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLARE 470 (480)
T ss_pred HHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 998877799999985 1 36899999999999974 478999999999999999999999999999999863
No 13
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5e-65 Score=510.15 Aligned_cols=423 Identities=26% Similarity=0.421 Sum_probs=316.8
Q ss_pred CHHHHHHHHhCC--CEEEEEeCCcchhhhcc-CCCCCCCCC--CCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhH
Q 037999 1 MLTLAELFSHAG--FRVTFVNTEQYHDRLLG-NNDVTGFYK--RFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSK 75 (447)
Q Consensus 1 ~l~La~~La~rG--h~VT~~t~~~~~~~i~~-~~~~~~~~~--~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~ 75 (447)
|++||++|+.+| ..|||++|+.++.++.+ .... .... ..++|+|+.+|++.++.. . ..++..++..+...+.
T Consensus 19 ~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~lp~~~~~~~-~-~~~~~~~~~~~~~~~~ 95 (481)
T PLN02554 19 TVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYI-ASLSASSEDRLRYEVISAGDQPTT-E-DPTFQSYIDNQKPKVR 95 (481)
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhh-hhcccCCCCCeEEEEcCCCCCCcc-c-chHHHHHHHHHHHHHH
Confidence 689999999998 89999999987653321 0000 0000 123699999997764321 1 1133333444444455
Q ss_pred HHHHHHHhCC----CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCccc
Q 037999 76 LAFLQLLMSP----GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKC 151 (447)
Q Consensus 76 ~~l~~ll~~~----~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~ 151 (447)
..+++++... .++.+|||+|.+++|+.++|+++|||++.|+++++++++.+++++......-.+..........-.
T Consensus 96 ~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 175 (481)
T PLN02554 96 DAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELD 175 (481)
T ss_pred HHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeE
Confidence 5556655431 113489999999999999999999999999999999998887765432111011111111111224
Q ss_pred CCCCC-cccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhh---ccCeeEEeccccccc
Q 037999 152 IPGLE-NFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGS---RLTKIYTVGPLHALL 227 (447)
Q Consensus 152 ~p~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~---~~p~v~~vGpl~~~~ 227 (447)
+|++. + ++..+++.++.. ..+...+.+....+.+++++++||+.+||..++..++. ..|+++.|||++...
T Consensus 176 iPgl~~p-l~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~ 250 (481)
T PLN02554 176 VPSLTRP-YPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLE 250 (481)
T ss_pred CCCCCCC-CCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccc
Confidence 78874 5 777788765432 12234444555667789999999999999999988875 458899999995321
Q ss_pred cccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCC
Q 037999 228 KSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLID 307 (447)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 307 (447)
... . . .. ...+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+...
T Consensus 251 ~~~-------~-~-----~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~ 316 (481)
T PLN02554 251 NSG-------D-D-----SK-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPN 316 (481)
T ss_pred ccc-------c-c-----cc-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCccc
Confidence 110 0 0 00 12345799999998888999999999999999999999999999999999999753210
Q ss_pred C--------CCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHH
Q 037999 308 G--------EPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNS 379 (447)
Q Consensus 308 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na 379 (447)
. .+....+|++|.++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||
T Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na 396 (481)
T PLN02554 317 IMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNA 396 (481)
T ss_pred ccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhH
Confidence 0 00112368899889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEeC------------CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 380 RCVSEIWKIGLDMK------------DTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 380 ~~~~~~~g~g~~~~------------~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
+++++.+|+|+.+. +.+++++|+++|+++|+ + ++||+||+++++++++++++||||++|+++||+
T Consensus 397 ~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~ 474 (481)
T PLN02554 397 FEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQ 474 (481)
T ss_pred HHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 76556689999984 25799999999999997 6 899999999999999999999999999999997
Q ss_pred C
Q 037999 447 A 447 (447)
Q Consensus 447 ~ 447 (447)
+
T Consensus 475 ~ 475 (481)
T PLN02554 475 D 475 (481)
T ss_pred H
Confidence 4
No 14
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.2e-64 Score=503.70 Aligned_cols=415 Identities=32% Similarity=0.558 Sum_probs=324.6
Q ss_pred CHHHHHHHHhC--CCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 1 MLTLAELFSHA--GFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 1 ~l~La~~La~r--Gh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
|++||++|+++ ||+|||++++.+..++.+... .++++|+.+|+++|.+.. ...+...++..+...+.+.+
T Consensus 27 ~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~-------~~gi~fv~lp~~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 98 (459)
T PLN02448 27 MMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK-------PDNIRFATIPNVIPSELV-RAADFPGFLEAVMTKMEAPF 98 (459)
T ss_pred HHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC-------CCCEEEEECCCCCCCccc-cccCHHHHHHHHHHHhHHHH
Confidence 68999999999 999999999998887766421 137999999987776531 22355566666665678888
Q ss_pred HHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCC-CCCCcccCCCCCc
Q 037999 79 LQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEN-FDKPVKCIPGLEN 157 (447)
Q Consensus 79 ~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~~~~~~p~~~~ 157 (447)
++++++...++||||+|.+++|+..+|+++|||++.|+++++..++.+.+++.....+..|..... .......+|+++.
T Consensus 99 ~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~ 178 (459)
T PLN02448 99 EQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSS 178 (459)
T ss_pred HHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCC
Confidence 999887434789999999999999999999999999999999887776665443222222322110 1112335788776
Q ss_pred ccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecccccccccccccccc
Q 037999 158 FFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSRIQEDSA 236 (447)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~ 236 (447)
+...+++.++... .....+.+.+.+....+++.+++|||++||+.++++++... ++++.|||+.......
T Consensus 179 -l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~------ 249 (459)
T PLN02448 179 -TRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELK------ 249 (459)
T ss_pred -CChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccC------
Confidence 7777787655432 22334455555555667889999999999999999998765 4899999997532110
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCC
Q 037999 237 ESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVP 316 (447)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 316 (447)
... .+ ......+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.++++|||+++.+ .
T Consensus 250 -~~~--~~-~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~ 314 (459)
T PLN02448 250 -DNS--SS-SNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----------A 314 (459)
T ss_pred -CCc--cc-cccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----------h
Confidence 000 00 00111234789999998889999999999998899999999999999999999988532 1
Q ss_pred hhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC---
Q 037999 317 VELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK--- 393 (447)
Q Consensus 317 ~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--- 393 (447)
.++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 315 ~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 315 SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc
Confidence 23334455789999999999999999999999999999999999999999999999999999999988789998884
Q ss_pred ---CCCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 394 ---DTCDRSTIENLVRDLMD---NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 394 ---~~~~~~~l~~ai~~~l~---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+.+++++|+++|+++|. +++++||+||+++++++++++.+||||++|+++||++
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~ 454 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRD 454 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 24799999999999996 3578999999999999999999999999999999863
No 15
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1e-64 Score=498.84 Aligned_cols=415 Identities=28% Similarity=0.482 Sum_probs=310.8
Q ss_pred CHHHHHHHHhCC--CEEEE--EeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCC-CCcccHHHHHHhHhhhhH
Q 037999 1 MLTLAELFSHAG--FRVTF--VNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNP-RFGIYIKDWFCSDKPVSK 75 (447)
Q Consensus 1 ~l~La~~La~rG--h~VT~--~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~-~~~~~~~~~~~~~~~~~~ 75 (447)
|++||++|+++| +.||+ ++++.+...+.+... ......++|+|+.+|++.+.... ....+....+......+.
T Consensus 20 ~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (451)
T PLN03004 20 MVELGKTILSKNPSLSIHIILVPPPYQPESTATYIS--SVSSSFPSITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSN 97 (451)
T ss_pred HHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhc--cccCCCCCeEEEEcCCCCCCCCccccccCHHHHHHHHHHhhh
Confidence 689999999998 45555 555543333221100 00012236999999987643211 112233334444445677
Q ss_pred HHHHHHHhCCC--CCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCC
Q 037999 76 LAFLQLLMSPG--LLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIP 153 (447)
Q Consensus 76 ~~l~~ll~~~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p 153 (447)
+.++++|.+.. .+++|||+|.+++|+..+|+++|||++.|+++++++++.+.+++.... ..|..... ......+|
T Consensus 98 ~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~--~~~~~~~~-~~~~v~iP 174 (451)
T PLN03004 98 PSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDE--TTPGKNLK-DIPTVHIP 174 (451)
T ss_pred HHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccc--cccccccc-cCCeecCC
Confidence 78888887632 256999999999999999999999999999999999888776543211 11111000 11123478
Q ss_pred CCCcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc--CeeEEeccccccccccc
Q 037999 154 GLENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL--TKIYTVGPLHALLKSRI 231 (447)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~--p~v~~vGpl~~~~~~~~ 231 (447)
+++. ++..+++.++... .....+.+.+......+++++++|||++||+.++++++... ++++.|||++......
T Consensus 175 g~p~-l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~- 250 (451)
T PLN03004 175 GVPP-MKGSDMPKAVLER--DDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIE- 250 (451)
T ss_pred CCCC-CChHHCchhhcCC--chHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccc-
Confidence 8877 8888888765432 22233444555556677889999999999999999998752 6899999997432100
Q ss_pred cccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCC--
Q 037999 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGE-- 309 (447)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-- 309 (447)
. ... ..+++|.+||+.+++++||||||||+..++.+++++++.+|+.++++|||+++.+...+.
T Consensus 251 ------~-------~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~ 316 (451)
T PLN03004 251 ------D-------RND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTE 316 (451)
T ss_pred ------c-------ccc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccc
Confidence 0 011 134579999999888999999999999999999999999999999999999985311000
Q ss_pred -CCCCCCChhhhhhcCCCe-eEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcc
Q 037999 310 -PGVGPVPVELEQGTKERG-CIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (447)
Q Consensus 310 -~~~~~~~~~~~~~~~~~~-~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 387 (447)
.....+|++|.+|..++. ++.+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++++|
T Consensus 317 ~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g 396 (451)
T PLN03004 317 LDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIK 396 (451)
T ss_pred cchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhC
Confidence 011137889998887655 455999999999999999999999999999999999999999999999999999987789
Q ss_pred eeeEeC-C---CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 037999 388 IGLDMK-D---TCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRN 440 (447)
Q Consensus 388 ~g~~~~-~---~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~ 440 (447)
+|+.++ + .+++++|+++|+++|++ ++||+||+++++++++|+++||||+++
T Consensus 397 ~g~~l~~~~~~~~~~e~l~~av~~vm~~--~~~r~~a~~~~~~a~~Av~~GGSS~~~ 451 (451)
T PLN03004 397 IAISMNESETGFVSSTEVEKRVQEIIGE--CPVRERTMAMKNAAELALTETGSSHTA 451 (451)
T ss_pred ceEEecCCcCCccCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999996 2 57999999999999998 899999999999999999999999853
No 16
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.3e-64 Score=496.49 Aligned_cols=421 Identities=25% Similarity=0.389 Sum_probs=313.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC----CCCCCCCCCCcccH----HHHHHhHhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP----DGLPPDNPRFGIYI----KDWFCSDKP 72 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp----~~l~~~~~~~~~~~----~~~~~~~~~ 72 (447)
|++||++|++||+.|||++++.+..++.+.... ..++|+|+.+| +++|++.. ...++ ..++.....
T Consensus 23 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~-----~~~~i~~~~lp~p~~dglp~~~~-~~~~~~~~~~~~~~~~~~ 96 (472)
T PLN02670 23 FLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQ-----LSSSITLVSFPLPSVPGLPSSAE-SSTDVPYTKQQLLKKAFD 96 (472)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchHHhhhhcccc-----CCCCeeEEECCCCccCCCCCCcc-cccccchhhHHHHHHHHH
Confidence 689999999999999999999988776542111 11269999998 67876532 12222 134555666
Q ss_pred hhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccC
Q 037999 73 VSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCI 152 (447)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 152 (447)
.+.+.+++++++. +++|||+|.+++|+.++|+++|||++.|++++++.++.+++.......+..+.....+...+.++
T Consensus 97 ~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 174 (472)
T PLN02670 97 LLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWV 174 (472)
T ss_pred HhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccccCCCCcC
Confidence 6888999999775 78999999999999999999999999999999988887654322222222221111111112223
Q ss_pred CCCCc-ccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecccccccccc
Q 037999 153 PGLEN-FFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSR 230 (447)
Q Consensus 153 p~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~~~ 230 (447)
|+... .++..+++.++..............+......+++++|+|||++||+.++++++... ++++.|||++......
T Consensus 175 P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~ 254 (472)
T PLN02670 175 PFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDD 254 (472)
T ss_pred CCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccc
Confidence 32221 144566776553222122223333444445667899999999999999999998764 6899999997531100
Q ss_pred ccccccCCCCCCCCCCCCc-cccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCC
Q 037999 231 IQEDSAESSPPESNNCVLS-KEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGE 309 (447)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 309 (447)
. . . .... ..+++|.+|||.+++++||||||||+..++.+++.+++.+|+.++++|||+++.......
T Consensus 255 ~------~-~-----~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 322 (472)
T PLN02670 255 E------E-D-----DTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQ 322 (472)
T ss_pred c------c-c-----cccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 0 0 0 0000 112569999999888999999999999999999999999999999999999985311100
Q ss_pred CCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcce
Q 037999 310 PGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKI 388 (447)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~ 388 (447)
.....+|++|.++..++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++ +|+
T Consensus 323 ~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~ 401 (472)
T PLN02670 323 NALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKL 401 (472)
T ss_pred chhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCe
Confidence 111258999999988888876 999999999999999999999999999999999999999999999999999965 899
Q ss_pred eeEeC-----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 389 GLDMK-----DTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 389 g~~~~-----~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
|+.+. +.+++++|+++|+++|. ++|++||+||+++++++++. +.-.+.+++|++
T Consensus 402 Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~ 461 (472)
T PLN02670 402 GLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVH 461 (472)
T ss_pred eEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHH
Confidence 99995 24899999999999997 44679999999999999875 777777777764
No 17
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.4e-63 Score=498.95 Aligned_cols=420 Identities=26% Similarity=0.382 Sum_probs=307.0
Q ss_pred CHHHHHHHHhCC---CEEEEEeCCcchh-----hhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCC-cccHHHHHHhHh
Q 037999 1 MLTLAELFSHAG---FRVTFVNTEQYHD-----RLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRF-GIYIKDWFCSDK 71 (447)
Q Consensus 1 ~l~La~~La~rG---h~VT~~t~~~~~~-----~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~-~~~~~~~~~~~~ 71 (447)
|++||++|+.+| +.||+++++.+.. .+.+.. ...++|+|+.+|++..+..... .......+..+.
T Consensus 20 ~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~------~~~~~i~~~~lp~~~~p~~~~~~~~~~~~~~~~~~ 93 (475)
T PLN02167 20 TIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLI------ASEPRIRLVTLPEVQDPPPMELFVKASEAYILEFV 93 (475)
T ss_pred HHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcc------cCCCCeEEEECCCCCCCccccccccchHHHHHHHH
Confidence 689999999999 4577777654321 111110 1123699999996542211010 111112233333
Q ss_pred hhhHHHHHHHHhCC-------CC-CCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCC-CCCC
Q 037999 72 PVSKLAFLQLLMSP-------GL-LPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGEL-PVTN 142 (447)
Q Consensus 72 ~~~~~~l~~ll~~~-------~~-~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~-P~~~ 142 (447)
..+.+.++++|++. +. +++|||+|.+++|+.++|+++|||++.|++++++.++.+++++..... .. ....
T Consensus 94 ~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~-~~~~~~~ 172 (475)
T PLN02167 94 KKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRK-TASEFDL 172 (475)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccc-ccccccc
Confidence 34455555554431 12 459999999999999999999999999999999988877655432111 10 0001
Q ss_pred CCCCCCcccCCCCCcccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhc---cCeeEE
Q 037999 143 ENFDKPVKCIPGLENFFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR---LTKIYT 219 (447)
Q Consensus 143 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~---~p~v~~ 219 (447)
.... ....+|+++..+...+++.++.... ..+.+.+..+...+++++|+|||++||++++++++.. .|+++.
T Consensus 173 ~~~~-~~~~iPgl~~~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~ 247 (475)
T PLN02167 173 SSGE-EELPIPGFVNSVPTKVLPPGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYP 247 (475)
T ss_pred CCCC-CeeECCCCCCCCChhhCchhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEE
Confidence 0001 1223788732267777775443211 1223344455567889999999999999999998764 488999
Q ss_pred eccccccccccccccccCCCCCCCCCCCCc-cccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEE
Q 037999 220 VGPLHALLKSRIQEDSAESSPPESNNCVLS-KEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFL 298 (447)
Q Consensus 220 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i 298 (447)
|||+++..... . ..+. ..+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++||
T Consensus 248 vGpl~~~~~~~--------~------~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~fl 313 (475)
T PLN02167 248 VGPILSLKDRT--------S------PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFL 313 (475)
T ss_pred ecccccccccc--------C------CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEE
Confidence 99998642210 0 0111 1235799999998888999999999998999999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHH
Q 037999 299 WVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVN 378 (447)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n 378 (447)
|+++.+..........+|++|.+++.+++++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.|
T Consensus 314 w~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 393 (475)
T PLN02167 314 WSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLN 393 (475)
T ss_pred EEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhh
Confidence 99985321100112247889998999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEeC--------CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 379 SRCVSEIWKIGLDMK--------DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 379 a~~~~~~~g~g~~~~--------~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
|+++++.+|+|+.+. +.+++++|+++|+++|.++ ++||+||+++++++++++.+||||++|+++||++
T Consensus 394 a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~ 469 (475)
T PLN02167 394 AFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE-DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDD 469 (475)
T ss_pred HHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 988666789999885 1469999999999999741 5899999999999999999999999999999963
No 18
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=9e-63 Score=483.23 Aligned_cols=401 Identities=22% Similarity=0.344 Sum_probs=305.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC--CCCCCCCCCCccc----HHHHHHhHhhhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP--DGLPPDNPRFGIY----IKDWFCSDKPVS 74 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp--~~l~~~~~~~~~~----~~~~~~~~~~~~ 74 (447)
|++||+.|+++|+.|||++|+.+..++.+.... .....+++.++| +++|++.. ...+ ....+......+
T Consensus 22 ~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~----~~~~~v~~~~~p~~~glp~g~e-~~~~~~~~~~~~~~~a~~~~ 96 (453)
T PLN02764 22 FLFLANKLAEKGHTVTFLLPKKALKQLEHLNLF----PHNIVFRSVTVPHVDGLPVGTE-TVSEIPVTSADLLMSAMDLT 96 (453)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhcccccC----CCCceEEEEECCCcCCCCCccc-ccccCChhHHHHHHHHHHHh
Confidence 689999999999999999999887665542100 001137788887 78877621 1111 122344444467
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCC
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPG 154 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~ 154 (447)
.+.++++|++. ++||||+|. ++|+.++|+++|||++.|++++++.++.+.. + .+..+ .+ .|+
T Consensus 97 ~~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~~-------~~---~pg 158 (453)
T PLN02764 97 RDQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGELG-------VP---PPG 158 (453)
T ss_pred HHHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccCC-------CC---CCC
Confidence 78899999775 689999995 8899999999999999999999988776542 1 11110 01 244
Q ss_pred CCc---ccccCCCCCccc--CCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecccccccc
Q 037999 155 LEN---FFRNRDLPSICR--DGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLK 228 (447)
Q Consensus 155 ~~~---~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~~ 228 (447)
++. .++.++++.+.. .............+......+++++++|||++||+.++++++... ++++.|||++....
T Consensus 159 lp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~ 238 (453)
T PLN02764 159 YPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPD 238 (453)
T ss_pred CCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcc
Confidence 431 134455544211 111111122222223255677889999999999999999998754 68999999975321
Q ss_pred ccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 037999 229 SRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG 308 (447)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 308 (447)
. .. ..+++|.+|||.+++++||||||||...++.+++.+++.+|+.++.+|+|+++.+....
T Consensus 239 ~----------------~~--~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~ 300 (453)
T PLN02764 239 K----------------TR--ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS 300 (453)
T ss_pred c----------------cc--cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc
Confidence 0 00 12457999999999999999999999999999999999999999999999998532110
Q ss_pred CCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcc
Q 037999 309 EPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (447)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 387 (447)
.....+|++|.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|
T Consensus 301 -~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g 379 (453)
T PLN02764 301 -TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELK 379 (453)
T ss_pred -chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhc
Confidence 112358999999988888777 999999999999999999999999999999999999999999999999999987789
Q ss_pred eeeEeC-C---CCCHHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 388 IGLDMK-D---TCDRSTIENLVRDLMDN---KRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 388 ~g~~~~-~---~~~~~~l~~ai~~~l~~---~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+|+.+. + .+++++|+++|+++|++ +++++|++++++++++++ ||||++++++||++
T Consensus 380 ~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~ 442 (453)
T PLN02764 380 VSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIES 442 (453)
T ss_pred eEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHH
Confidence 999985 2 58999999999999963 467899999999999854 69999999999863
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.2e-62 Score=491.76 Aligned_cols=426 Identities=26% Similarity=0.467 Sum_probs=305.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCC-CCCC-CCeeEEeCC---CCCCCCCCCC-------cccHHHHH-
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGF-YKRF-PNFRFTSIP---DGLPPDNPRF-------GIYIKDWF- 67 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~-~~~~-~~i~f~~lp---~~l~~~~~~~-------~~~~~~~~- 67 (447)
|++||++|++|||+|||++++.+..++.+......+ .... ..+.+.++| +++|++.... ..+...++
T Consensus 22 ~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~ 101 (482)
T PLN03007 22 TLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFL 101 (482)
T ss_pred HHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcccccccccccccchHHHHH
Confidence 689999999999999999999988776654221000 0111 145556666 5677652111 01111222
Q ss_pred --HhHhhhhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCC
Q 037999 68 --CSDKPVSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENF 145 (447)
Q Consensus 68 --~~~~~~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 145 (447)
......+.+.+++++++. ++||||+|.+++|+..+|+++|||+++||+++++..+.++.+....+....+ ..
T Consensus 102 ~~~~~~~~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~--~~-- 175 (482)
T PLN03007 102 KFLFSTKYFKDQLEKLLETT--RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVA--SS-- 175 (482)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccC--CC--
Confidence 223344566677777654 7899999999999999999999999999999998877655443211111111 00
Q ss_pred CCCcccCCCCCc--ccccCCCCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecc
Q 037999 146 DKPVKCIPGLEN--FFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGP 222 (447)
Q Consensus 146 ~~~~~~~p~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGp 222 (447)
. ....+|+++. .+...+++.. .....+........+...+++++++||+++||+++++.+++.. +++++|||
T Consensus 176 ~-~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGP 250 (482)
T PLN03007 176 S-EPFVIPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGP 250 (482)
T ss_pred C-ceeeCCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcc
Confidence 0 0112555542 1233333321 1112223333334445678899999999999999999998765 47999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 037999 223 LHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIR 302 (447)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 302 (447)
+..........+ ..+ ...+..+++|.+||+.+++++||||||||+...+.+++.+++.+|+.++++|||+++
T Consensus 251 l~~~~~~~~~~~---~~~-----~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~ 322 (482)
T PLN03007 251 LSLYNRGFEEKA---ERG-----KKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVR 322 (482)
T ss_pred cccccccccccc---ccC-----CccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 865322100000 001 111123467999999988899999999999998999999999999999999999998
Q ss_pred cCCCCCCCCCCCCChhhhhhcC-CCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHH
Q 037999 303 SDLIDGEPGVGPVPVELEQGTK-ERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRC 381 (447)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 381 (447)
.+.... .....+|++|.++.. .|+++.+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||++
T Consensus 323 ~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~ 401 (482)
T PLN03007 323 KNENQG-EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKL 401 (482)
T ss_pred cCCccc-chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHH
Confidence 542110 011247888887764 455666999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEe--------C-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 382 VSEIWKIGLDM--------K-DTCDRSTIENLVRDLMDN-KRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 382 ~~~~~g~g~~~--------~-~~~~~~~l~~ai~~~l~~-~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
+++.+++|+.+ + +.+++++|+++|+++|.+ ++++||+||+++++++++++.+||||++|+++||+
T Consensus 402 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~ 476 (482)
T PLN03007 402 VTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFME 476 (482)
T ss_pred HHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 88766666665 2 457999999999999974 46799999999999999999999999999999986
No 20
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.8e-62 Score=483.80 Aligned_cols=395 Identities=22% Similarity=0.359 Sum_probs=299.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeC--C--CCCCCCCCCCccc----HHHHHHhHhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSI--P--DGLPPDNPRFGIY----IKDWFCSDKP 72 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~l--p--~~l~~~~~~~~~~----~~~~~~~~~~ 72 (447)
|++||++|+++||+|||++++.+..++.+.... .++++|..+ | +++|++.. ...+ +..++.....
T Consensus 21 ~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~------~~~i~~~~l~~p~~dgLp~g~~-~~~~l~~~l~~~~~~~~~ 93 (442)
T PLN02208 21 FLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLF------PDSIVFHPLTIPPVNGLPAGAE-TTSDIPISMDNLLSEALD 93 (442)
T ss_pred HHHHHHHHHhCCCEEEEEeccchhhhhhcccCC------CCceEEEEeCCCCccCCCCCcc-cccchhHHHHHHHHHHHH
Confidence 689999999999999999999887776553211 114555544 4 56776632 1222 2233444455
Q ss_pred hhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccC
Q 037999 73 VSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCI 152 (447)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 152 (447)
.+.+.+++++++. ++||||+| ++.|+..+|+++|||++.|++++++..+ +.+.+. ... .. .+
T Consensus 94 ~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~-------~~---~~ 155 (442)
T PLN02208 94 LTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKL-------GV---PP 155 (442)
T ss_pred HHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----ccc-------CC---CC
Confidence 6778888888765 78999999 5789999999999999999999998654 333221 000 00 12
Q ss_pred CCCCc---ccccCCCCCcccCCCCCchHHHHHHHHh-hhcccCceEEeccccccchHHHHHHhhcc-CeeEEeccccccc
Q 037999 153 PGLEN---FFRNRDLPSICRDGGPDDPILQTFIRDT-SATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALL 227 (447)
Q Consensus 153 p~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~~ 227 (447)
|+++. .++..+++.+ . ..........+.. +...+++++++|||.+||+.++++++... |+++.|||++...
T Consensus 156 pglp~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~ 231 (442)
T PLN02208 156 PGYPSSKVLFRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP 231 (442)
T ss_pred CCCCCcccccCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc
Confidence 44443 1345555543 1 1122233333322 34567899999999999999999987654 8999999998642
Q ss_pred cccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCC
Q 037999 228 KSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLID 307 (447)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 307 (447)
.. + . ..+++|.+||+.+++++||||||||+..++.+++.+++.+++.++.+|+|+++.+...
T Consensus 232 ~~----------~-----~---~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~ 293 (442)
T PLN02208 232 DT----------S-----K---PLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS 293 (442)
T ss_pred CC----------C-----C---CCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc
Confidence 10 0 0 1356799999998889999999999999999999999999988999999999854211
Q ss_pred CCCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhc
Q 037999 308 GEPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIW 386 (447)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~ 386 (447)
. .....+|++|.++..++.+++ +|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 294 ~-~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~ 372 (442)
T PLN02208 294 S-TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEF 372 (442)
T ss_pred c-chhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHh
Confidence 0 011258889988876655555 99999999999999999999999999999999999999999999999999987778
Q ss_pred ceeeEeC-CC---CCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 387 KIGLDMK-DT---CDRSTIENLVRDLMD---NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 387 g~g~~~~-~~---~~~~~l~~ai~~~l~---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
|+|+.+. +. +++++|+++|+++|+ ++++++|++|+++++.+. ++|||++|+++||++
T Consensus 373 g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~ 436 (442)
T PLN02208 373 EVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEE 436 (442)
T ss_pred ceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHH
Confidence 9999996 33 899999999999996 347889999999999974 378999999999974
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-61 Score=477.70 Aligned_cols=395 Identities=23% Similarity=0.343 Sum_probs=298.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeC--C--CCCCCCCCCCcccH----HHHHHhHhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSI--P--DGLPPDNPRFGIYI----KDWFCSDKP 72 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~l--p--~~l~~~~~~~~~~~----~~~~~~~~~ 72 (447)
|++||++|+++|++|||++++.++.++.+.... .++++|..+ | +++|++. +...++ ...+.....
T Consensus 21 mL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~------~~~i~~~~i~lP~~dGLP~g~-e~~~~l~~~~~~~~~~a~~ 93 (446)
T PLN00414 21 YLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLF------PDSIVFEPLTLPPVDGLPFGA-ETASDLPNSTKKPIFDAMD 93 (446)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhcccccC------CCceEEEEecCCCcCCCCCcc-cccccchhhHHHHHHHHHH
Confidence 689999999999999999999887776554211 124788555 3 6787762 122222 223344444
Q ss_pred hhHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccC
Q 037999 73 VSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCI 152 (447)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 152 (447)
.+.+.+++++... ++||||+|. ++|+.++|+++|||++.|+++++++.+.+++ +.. .... | +
T Consensus 94 ~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~-~~~~-~------------~ 155 (446)
T PLN00414 94 LLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRA-ELGF-P------------P 155 (446)
T ss_pred HHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHh-hcCC-C------------C
Confidence 5777888887654 789999995 8899999999999999999999988877654 210 0000 0 1
Q ss_pred CCCCc---ccccCC--CCCcccCCCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHHhhcc-CeeEEecccccc
Q 037999 153 PGLEN---FFRNRD--LPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHAL 226 (447)
Q Consensus 153 p~~~~---~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vGpl~~~ 226 (447)
|+++. .++..+ ++.++.. ....+.+..+...+++++++|||.+||+.++++++... ++++.|||++..
T Consensus 156 pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~ 229 (446)
T PLN00414 156 PDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPE 229 (446)
T ss_pred CCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCC
Confidence 33321 011111 1111110 11223333455667899999999999999999998865 579999999753
Q ss_pred ccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC
Q 037999 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (447)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 306 (447)
... . .. ...+++|.+|||.+++++||||||||...++.+++.+++.+|+.++.+|+|+++.+..
T Consensus 230 ~~~----------~-----~~-~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~ 293 (446)
T PLN00414 230 PQN----------K-----SG-KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKG 293 (446)
T ss_pred ccc----------c-----cC-cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Confidence 210 0 01 0123569999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCCChhhhhhcCCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhh
Q 037999 307 DGEPGVGPVPVELEQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEI 385 (447)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~ 385 (447)
.. .....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++++++
T Consensus 294 ~~-~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~ 372 (446)
T PLN00414 294 SS-TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEE 372 (446)
T ss_pred cc-cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHH
Confidence 10 112358999999999999887 9999999999999999999999999999999999999999999999999999877
Q ss_pred cceeeEeC-C---CCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhC
Q 037999 386 WKIGLDMK-D---TCDRSTIENLVRDLMD---NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIKA 447 (447)
Q Consensus 386 ~g~g~~~~-~---~~~~~~l~~ai~~~l~---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 447 (447)
+|+|+.+. + .+++++|+++++++|. +++++||++|+++++.+. ++|||| .++++||++
T Consensus 373 ~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~ 437 (446)
T PLN00414 373 LEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEA 437 (446)
T ss_pred hCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHH
Confidence 99999995 2 4899999999999996 346789999999999974 557744 338999863
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.3e-50 Score=407.17 Aligned_cols=315 Identities=17% Similarity=0.221 Sum_probs=243.2
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHc-CCCeEEEcCCchhHHHHhhhhh-hhhhhCCCCCCCCCCCCCcccC
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEEL-NIPIITFRPYSAHCSWSDFHFS-KLAEEGELPVTNENFDKPVKCI 152 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~l-gIP~v~~~~~~~~~~~~~~~~~-~~~~~~~~P~~~~~~~~~~~~~ 152 (447)
.+.+.++|++.+.+||++|+|.+..|+..+|+.+ ++|.|.+++....... ...++ .+.+.+|+|......++.|.++
T Consensus 123 ~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~-~~~~gg~p~~~syvP~~~~~~~~~Msf~ 201 (507)
T PHA03392 123 LPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAEN-FETMGAVSRHPVYYPNLWRSKFGNLNVW 201 (507)
T ss_pred CHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhH-HHhhccCCCCCeeeCCcccCCCCCCCHH
Confidence 4455667753233899999999988999999999 9998887775544322 22334 6778899998888888889999
Q ss_pred CCCCcccccCCCCCcccC-CCCCchHHHHHHH-----HhhhcccCceEEeccccccchHHHHHHhhccCeeEEecccccc
Q 037999 153 PGLENFFRNRDLPSICRD-GGPDDPILQTFIR-----DTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHAL 226 (447)
Q Consensus 153 p~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vGpl~~~ 226 (447)
.++.|.+........... ....+...+.... ..+...+.+++|+|+.+.+|++ ||.+|++++|||++.+
T Consensus 202 ~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~ 276 (507)
T PHA03392 202 ETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLH 276 (507)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccC
Confidence 988883211100000000 0111112222211 1133467789999999888887 9999999999999874
Q ss_pred ccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEeccccc---CCHHHHHHHHHHHHhCCCcEEEEEec
Q 037999 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIK---LGREQILEFWHGMVNSGKRFLWVIRS 303 (447)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~ 303 (447)
..+. . ..++++.+|++.. ++++|||||||+.. ++.+.++.+++++++.+++|||+++.
T Consensus 277 ~~~~--------~----------~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~ 337 (507)
T PHA03392 277 KKPP--------Q----------PLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDG 337 (507)
T ss_pred CCCC--------C----------CCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 3110 0 2456688899964 56899999999863 57788999999999999999999963
Q ss_pred CCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHH
Q 037999 304 DLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVS 383 (447)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~ 383 (447)
. ..+ ...++|+++.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||++++
T Consensus 338 ~---------~~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~ 404 (507)
T PHA03392 338 E---------VEA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYV 404 (507)
T ss_pred C---------cCc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHH
Confidence 2 111 125689999999999999999999999999999999999999999999999999999999997
Q ss_pred hhcceeeEeC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 384 EIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 384 ~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
+ +|+|+.++ +.++.++|.++|+++|+| ++||+||+++++.+++.
T Consensus 405 ~-~G~G~~l~~~~~t~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 405 E-LGIGRALDTVTVSAAQLVLAIVDVIEN--PKYRKNLKELRHLIRHQ 449 (507)
T ss_pred H-cCcEEEeccCCcCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhC
Confidence 6 69999998 689999999999999999 99999999999999974
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=3.7e-53 Score=432.25 Aligned_cols=379 Identities=24% Similarity=0.352 Sum_probs=240.1
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCc-ccH-HHHHH----------
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFG-IYI-KDWFC---------- 68 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~-~~~-~~~~~---------- 68 (447)
|..|+++|++|||+||++++... ..+..... ..+++..++...+....... .+. ...+.
T Consensus 16 ~~~l~~~L~~rGH~VTvl~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (500)
T PF00201_consen 16 MRPLAEELAERGHNVTVLTPSPS-SSLNPSKP--------SNIRFETYPDPYPEEEFEEIFPEFISKFFSESSFANSFWE 86 (500)
T ss_dssp HHHHHHHHHHH-TTSEEEHHHHH-HT--------------S-CCEEEE-----TT------TTHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeecc-cccccccc--------cceeeEEEcCCcchHHHhhhhHHHHHHHhhhcccchhHHH
Confidence 45799999999999999987432 22221111 15677777655544321111 111 01111
Q ss_pred ---h---HhhhhHHHHHHHHhCC-------CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhh
Q 037999 69 ---S---DKPVSKLAFLQLLMSP-------GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEE 135 (447)
Q Consensus 69 ---~---~~~~~~~~l~~ll~~~-------~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 135 (447)
. +.......+++++.+. ..++|++|+|.+.+|+..+|+.+|||.+.+.+..+.........+.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~p 166 (500)
T PF00201_consen 87 MFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPP 166 (500)
T ss_dssp HHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTST
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCCh
Confidence 0 1111111222222221 01699999999999999999999999988765544333222222555678
Q ss_pred CCCCCCCCCCCCCcccCCCCCcccccCC---CCC-cccC-CCCCchHHHHHHHHhhhcccCceEEeccccccchHHHHHH
Q 037999 136 GELPVTNENFDKPVKCIPGLENFFRNRD---LPS-ICRD-GGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL 210 (447)
Q Consensus 136 ~~~P~~~~~~~~~~~~~p~~~~~~~~~~---l~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~ 210 (447)
+|+|.....++..|.+..++.|.+.... +.. +... ...............+.+.+.+++++|+.+.+++|
T Consensus 167 syvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p----- 241 (500)
T PF00201_consen 167 SYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP----- 241 (500)
T ss_dssp TSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------
T ss_pred HHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-----
Confidence 8999887777788998888887321100 000 0000 00000000000001122345678999998777766
Q ss_pred hhccCeeEEeccccccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEeccccc-CCHHHHHHHHHH
Q 037999 211 GSRLTKIYTVGPLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIK-LGREQILEFWHG 289 (447)
Q Consensus 211 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~~ 289 (447)
||..|++++|||++..+.+ + .++++..|++...++++|||||||+.. ++.+..++++++
T Consensus 242 rp~~p~v~~vGgl~~~~~~--------~------------l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~ 301 (500)
T PF00201_consen 242 RPLLPNVVEVGGLHIKPAK--------P------------LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEA 301 (500)
T ss_dssp HHHHCTSTTGCGC-S------------T------------CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHH
T ss_pred cchhhcccccCcccccccc--------c------------cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHH
Confidence 9999999999999875432 1 344577899965678999999999985 444558899999
Q ss_pred HHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 290 MVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 290 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
|++++++|||+++.. .+ ..+++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++
T Consensus 302 ~~~~~~~~iW~~~~~----------~~----~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~ 367 (500)
T PF00201_consen 302 FENLPQRFIWKYEGE----------PP----ENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGI 367 (500)
T ss_dssp HHCSTTEEEEEETCS----------HG----CHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-
T ss_pred HhhCCCccccccccc----------cc----ccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCC
Confidence 999999999999531 11 1256899999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 370 PQIGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 370 P~~~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
|+++||+.||+++++ .|+|+.++ ++++.++|.++|+++|+| ++|++||+++++++++-
T Consensus 368 P~~~DQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 368 PLFGDQPRNAARVEE-KGVGVVLDKNDLTEEELRAAIREVLEN--PSYKENAKRLSSLFRDR 426 (500)
T ss_dssp GCSTTHHHHHHHHHH-TTSEEEEGGGC-SHHHHHHHHHHHHHS--HHHHHHHHHHHHTTT--
T ss_pred CCcccCCccceEEEE-EeeEEEEEecCCcHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcC
Confidence 999999999999977 59999998 789999999999999999 99999999999998864
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=9.8e-43 Score=355.46 Aligned_cols=390 Identities=27% Similarity=0.396 Sum_probs=247.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCC--CCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYK--RFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~--~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
|+.||++|+++||+||++++.......... ....... ....+.+...+++++....................+...+
T Consensus 22 ~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (496)
T KOG1192|consen 22 MLQLAKRLAERGHNVTVVTPSFNALKLSKS-SKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLDISESLLELNKTCEDLL 100 (496)
T ss_pred HHHHHHHHHHcCCceEEEEeechhcccCCc-ccceeeeeeecChHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999998765554332 1100000 0011222222233333321110011111222333333333
Q ss_pred HHHH----hCCCCCCcEEEECCCcchHHHHHHHcC-CCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCC-CCcccC
Q 037999 79 LQLL----MSPGLLPTCIISDSIMSFTIDVAEELN-IPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFD-KPVKCI 152 (447)
Q Consensus 79 ~~ll----~~~~~~~D~iI~D~~~~~~~~~A~~lg-IP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~~~~~~ 152 (447)
++.+ .....++|++|+|.+..|...++...+ |+...+++.++....... +.+..++|....... ..+.+.
T Consensus 101 ~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~----~~~~~~~p~~~~~~~~~~~~~~ 176 (496)
T KOG1192|consen 101 RDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGL----PSPLSYVPSPFSLSSGDDMSFP 176 (496)
T ss_pred hchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCC----cCcccccCcccCccccccCcHH
Confidence 3322 122224999999999878888887775 999888888777654333 223346665443211 233333
Q ss_pred CCCCcccccCCCCCcccCCCCC---chHHHHHH--------HHhhhcccCceEEeccccccchHHHHHHhhccCeeEEec
Q 037999 153 PGLENFFRNRDLPSICRDGGPD---DPILQTFI--------RDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVG 221 (447)
Q Consensus 153 p~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~p~v~~vG 221 (447)
.+..+ +....++.+....... ........ .......+++..++|+...++.+ .++..+++++||
T Consensus 177 ~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~----~~~~~~~v~~IG 251 (496)
T KOG1192|consen 177 ERVPN-LIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE----PRPLLPKVIPIG 251 (496)
T ss_pred HHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC----CCCCCCCceEEC
Confidence 33333 2222222211110000 00000000 00122345567777776555541 255679999999
Q ss_pred cccccccccccccccCCCCCCCCCCCCccccccccccccCCCCC--eEEEEEecccc---cCCHHHHHHHHHHHHhC-CC
Q 037999 222 PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSR--SVLYVSFGSFI---KLGREQILEFWHGMVNS-GK 295 (447)
Q Consensus 222 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~-~~ 295 (447)
|++....+. .+..+.+|++..+.. +||||||||+. .++.++..+++.+++.+ ++
T Consensus 252 ~l~~~~~~~--------------------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~ 311 (496)
T KOG1192|consen 252 PLHVKDSKQ--------------------KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGV 311 (496)
T ss_pred cEEecCccc--------------------cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCc
Confidence 999863211 011345677766555 89999999998 79999999999999999 88
Q ss_pred cEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHH-hcccccceeeeccChhhHHHHHHhCCceeecCccch
Q 037999 296 RFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEV-LAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGD 374 (447)
Q Consensus 296 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~l-L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~D 374 (447)
.|+|+++..... .+++++.++.++|+...+|+||.++ |.|+++|+||||||||||+|++++|||||++|+++|
T Consensus 312 ~FiW~~~~~~~~------~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~D 385 (496)
T KOG1192|consen 312 TFLWKYRPDDSI------YFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGD 385 (496)
T ss_pred eEEEEecCCcch------hhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCcccc
Confidence 899999753211 1333332222467888899999998 599999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 037999 375 QQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMAR 428 (447)
Q Consensus 375 Q~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~ 428 (447)
|+.||+++++++++++......+.+.+.+++.+++++ ++|+++|+++++.++
T Consensus 386 Q~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~--~~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 386 QPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN--EEYKEAAKRLSEILR 437 (496)
T ss_pred chhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC--hHHHHHHHHHHHHHH
Confidence 9999999998766666666556666699999999998 999999999999876
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=3.5e-38 Score=312.09 Aligned_cols=347 Identities=21% Similarity=0.269 Sum_probs=233.5
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCC---cccHHHHHHhHhhhhHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRF---GIYIKDWFCSDKPVSKLA 77 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (447)
|+.||++|+++||+|||++++.+.+.+.+. |+.|+++++.++...... ..+....+..+...+...
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~-----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTEEFAERVEAA-----------GAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDV 80 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCHHHHHHHHHc-----------CCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHH
Confidence 689999999999999999999999998887 888988886544311000 012233333333333333
Q ss_pred HHHHHhC-CCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCcccCCCCC
Q 037999 78 FLQLLMS-PGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPVKCIPGLE 156 (447)
Q Consensus 78 l~~ll~~-~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~p~~~ 156 (447)
+.++++. ...+||+||+|.+++|+..+|+++|||+|.+++...... .++.. ..|.... . ....+
T Consensus 81 ~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~~----~~~~~~~-~---~~~~~--- 145 (392)
T TIGR01426 81 LPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFEEM----VSPAGEG-S---AEEGA--- 145 (392)
T ss_pred HHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----ccccc----ccccchh-h---hhhhc---
Confidence 3333322 112899999999989999999999999998754321110 00100 0010000 0 00000
Q ss_pred cccccCCCCCcccCCCCCchHHHHHH---HHhh---------hcccCceEEeccccccchHHHHHHhhc-cCeeEEeccc
Q 037999 157 NFFRNRDLPSICRDGGPDDPILQTFI---RDTS---------ATTRTSALVINTFNEIEGPIISKLGSR-LTKIYTVGPL 223 (447)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~---------~~~~~~~~l~ns~~~le~~~l~~~~~~-~p~v~~vGpl 223 (447)
...+. ...+.+.+. +... .....+..+..+.+.|+++ ++. .++++++||+
T Consensus 146 --~~~~~----------~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~ 208 (392)
T TIGR01426 146 --IAERG----------LAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETFDDSFTFVGPC 208 (392)
T ss_pred --cccch----------hHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccccCCCeEEECCC
Confidence 00000 000000010 0000 0112223455554444433 444 4689999998
Q ss_pred cccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEec
Q 037999 224 HALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRS 303 (447)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 303 (447)
...... ...|.....++++|||||||+.......+..+++++.+.+.+++|..+.
T Consensus 209 ~~~~~~-------------------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~ 263 (392)
T TIGR01426 209 IGDRKE-------------------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGR 263 (392)
T ss_pred CCCccc-------------------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECC
Confidence 653211 1126665567889999999987666678888999999999999998853
Q ss_pred CCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHH
Q 037999 304 DLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVS 383 (447)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~ 383 (447)
... ...+ ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.|++++.
T Consensus 264 ~~~---------~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~ 331 (392)
T TIGR01426 264 GVD---------PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIA 331 (392)
T ss_pred CCC---------hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHH
Confidence 210 0111 124679999999999999999887 9999999999999999999999999999999999997
Q ss_pred hhcceeeEeC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 384 EIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 384 ~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
+ +|+|+.+. ..+++++|.++|+++|.| ++|+++++++++.+++.
T Consensus 332 ~-~g~g~~l~~~~~~~~~l~~ai~~~l~~--~~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 332 E-LGLGRHLPPEEVTAEKLREAVLAVLSD--PRYAERLRKMRAEIREA 376 (392)
T ss_pred H-CCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHc
Confidence 6 69999997 678999999999999998 89999999999999875
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=9.5e-36 Score=295.93 Aligned_cols=350 Identities=15% Similarity=0.137 Sum_probs=220.6
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCC----------CcccHHHHHHhH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPR----------FGIYIKDWFCSD 70 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~----------~~~~~~~~~~~~ 70 (447)
|+.||++|++|||+|||++++.+...+... |++|+++++..+..... ...........+
T Consensus 17 ~l~la~~L~~rGh~V~~~t~~~~~~~v~~~-----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (401)
T cd03784 17 LVALAWALRAAGHEVRVATPPEFADLVEAA-----------GLEFVPVGGDPDELLASPERNAGLLLLGPGLLLGALRLL 85 (401)
T ss_pred HHHHHHHHHHCCCeEEEeeCHhHHHHHHHc-----------CCceeeCCCCHHHHHhhhhhcccccccchHHHHHHHHHH
Confidence 589999999999999999999888877766 78898887543321000 001111222223
Q ss_pred hhhhHHHHHHHHhCC-CCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhHHHHhhhhhhhhhhCCCCCCCCCCCCCc
Q 037999 71 KPVSKLAFLQLLMSP-GLLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNENFDKPV 149 (447)
Q Consensus 71 ~~~~~~~l~~ll~~~-~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 149 (447)
.......+.++++.. ..++|+||+|.+.+++..+|+++|||++.+++++........+ |.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~----------~~--------- 146 (401)
T cd03784 86 RREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPP----------PL--------- 146 (401)
T ss_pred HHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCC----------cc---------
Confidence 333334444444432 2389999999988999999999999999988765432111000 00
Q ss_pred ccCCCCCcccccCCCCCcccCCCCCchHHHHHHHHhhh------cccCceEEeccccccchHHHHHHhhcc-CeeEEec-
Q 037999 150 KCIPGLENFFRNRDLPSICRDGGPDDPILQTFIRDTSA------TTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVG- 221 (447)
Q Consensus 150 ~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~ns~~~le~~~l~~~~~~~-p~v~~vG- 221 (447)
..... ..+..+...... ...........+.... ....+..+....+.+.++ ++.+ ++..++|
T Consensus 147 ---~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~ 216 (401)
T cd03784 147 ---GRANL-RLYALLEAELWQ-DLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPP-----PPDWPRFDLVTGY 216 (401)
T ss_pred ---chHHH-HHHHHHHHHHHH-HHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCC-----CCCccccCcEeCC
Confidence 00000 000000000000 0000000000000000 001112222222222221 3333 4556665
Q ss_pred cccccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEecccccCCH-HHHHHHHHHHHhCCCcEEEE
Q 037999 222 PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIKLGR-EQILEFWHGMVNSGKRFLWV 300 (447)
Q Consensus 222 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~i~~ 300 (447)
++...+.. +..++++..|++. .+++|||+|||+..... .....+++++...+.++||+
T Consensus 217 ~~~~~~~~-------------------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~ 275 (401)
T cd03784 217 GFRDVPYN-------------------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILS 275 (401)
T ss_pred CCCCCCCC-------------------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEE
Confidence 33322110 1234456678874 56789999999986444 56778999999889999999
Q ss_pred EecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHH
Q 037999 301 IRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSR 380 (447)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 380 (447)
.+..... . ...++|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||+
T Consensus 276 ~g~~~~~--------~----~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~ 341 (401)
T cd03784 276 LGWGGLG--------A----EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAA 341 (401)
T ss_pred ccCcccc--------c----cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHH
Confidence 8643211 0 124679999999999999999888 9999999999999999999999999999999999
Q ss_pred HHHhhcceeeEeC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 037999 381 CVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARD 429 (447)
Q Consensus 381 ~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~ 429 (447)
++++ +|+|+.+. ..++.++|.++|++++++ + ++++++++++.+++
T Consensus 342 ~~~~-~G~g~~l~~~~~~~~~l~~al~~~l~~--~-~~~~~~~~~~~~~~ 387 (401)
T cd03784 342 RVAE-LGAGPALDPRELTAERLAAALRRLLDP--P-SRRRAAALLRRIRE 387 (401)
T ss_pred HHHH-CCCCCCCCcccCCHHHHHHHHHHHhCH--H-HHHHHHHHHHHHHh
Confidence 9976 69999997 568999999999999985 4 55667777776654
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=273.28 Aligned_cols=150 Identities=21% Similarity=0.374 Sum_probs=135.4
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhccc
Q 037999 263 PSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQ 342 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~ 342 (447)
.++++||+|+||.... .+.++.+.+++.+++.++|...... .. .+ ...++|+.+.+|+||..+|+++
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~------~~-----~~~p~n~~v~~~~p~~~~l~~a 301 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RD------TL-----VNVPDNVIVADYVPQLELLPRA 301 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cc------cc-----ccCCCceEEecCCCHHHHhhhc
Confidence 4678999999999976 8889999999999999999988531 00 01 1256899999999999999999
Q ss_pred ccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhHhHHHHHHHHH
Q 037999 343 AIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDKIMESTV 421 (447)
Q Consensus 343 ~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~ 421 (447)
++ ||||||+|||+|||++|||+|++|...||+.||.++++ .|+|+.+. +.++.+.++++|+++|.| +.|+++++
T Consensus 302 d~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~~~~l~~~~l~~av~~vL~~--~~~~~~~~ 376 (406)
T COG1819 302 DA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALPFEELTEERLRAAVNEVLAD--DSYRRAAE 376 (406)
T ss_pred CE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecCcccCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 99 99999999999999999999999999999999999966 79999998 689999999999999999 99999999
Q ss_pred HHHHHHHHH
Q 037999 422 QIAKMARDA 430 (447)
Q Consensus 422 ~~~~~~~~~ 430 (447)
++++.+++.
T Consensus 377 ~~~~~~~~~ 385 (406)
T COG1819 377 RLAEEFKEE 385 (406)
T ss_pred HHHHHhhhc
Confidence 999999987
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.82 E-value=7.2e-18 Score=162.27 Aligned_cols=121 Identities=15% Similarity=0.281 Sum_probs=96.2
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCC-CcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEeccc--ChHHHhc
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWA--PQEEVLA 340 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pq~~lL~ 340 (447)
+.+.|+|+||..... .+++++...+ ++|++. +.... +...+|+.+.+|. .-.++|.
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------------~~~~~ni~~~~~~~~~~~~~m~ 249 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------------DPRPGNIHVRPFSTPDFAELMA 249 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc--------------cccCCCEEEeecChHHHHHHHH
Confidence 446699999988743 5566666666 566555 33210 0125799999876 3457999
Q ss_pred ccccceeeeccChhhHHHHHHhCCceeecCc--cchhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHH
Q 037999 341 HQAIGGFLTHSGWNSTLESLVAGVPMICWPQ--IGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDL 408 (447)
Q Consensus 341 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~ 408 (447)
.+++ +|||||+||++|++++|+|+|++|. +.+|..||+.+.+ +|+|+.+. +.++++.|+++|+++
T Consensus 250 ~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 250 AADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred hCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEcccccCCHHHHHHHHhcC
Confidence 9888 9999999999999999999999999 7899999999966 79999998 789999999998764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.79 E-value=2.3e-17 Score=159.90 Aligned_cols=145 Identities=17% Similarity=0.198 Sum_probs=108.0
Q ss_pred CCCeEEEEEecccccCCHHH-HHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEeccc-Ch-HHHh
Q 037999 263 PSRSVLYVSFGSFIKLGREQ-ILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWA-PQ-EEVL 339 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq-~~lL 339 (447)
+++++|+|+.||......+. +.+++..+.. +.+++|+.+.+. +.... .+ ..+..+.+|+ ++ .+++
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~---------~~~~~-~~-~~~~~~~~f~~~~m~~~~ 250 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN---------LDDSL-QN-KEGYRQFEYVHGELPDIL 250 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch---------HHHHH-hh-cCCcEEecchhhhHHHHH
Confidence 45689999999999755533 4445555533 478899885431 11100 01 1355666887 44 4789
Q ss_pred cccccceeeeccChhhHHHHHHhCCceeecCcc-----chhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhHhH
Q 037999 340 AHQAIGGFLTHSGWNSTLESLVAGVPMICWPQI-----GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKR 413 (447)
Q Consensus 340 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~~~ 413 (447)
.++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+++ .|+|..+. ++++++.+.+++.+++.|.
T Consensus 251 ~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~~~~~~~~l~~~l~~ll~~~- 326 (352)
T PRK12446 251 AITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYEEDVTVNSLIKHVEELSHNN- 326 (352)
T ss_pred HhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcchhcCCHHHHHHHHHHHHcCH-
Confidence 99998 99999999999999999999999984 489999999977 69999987 7899999999999999751
Q ss_pred HHHHHHHHHH
Q 037999 414 DKIMESTVQI 423 (447)
Q Consensus 414 ~~~~~~a~~~ 423 (447)
+.|+++++++
T Consensus 327 ~~~~~~~~~~ 336 (352)
T PRK12446 327 EKYKTALKKY 336 (352)
T ss_pred HHHHHHHHHc
Confidence 3566555443
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.74 E-value=6.3e-16 Score=148.70 Aligned_cols=122 Identities=17% Similarity=0.244 Sum_probs=85.7
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccC--hHHHhccc
Q 037999 265 RSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAP--QEEVLAHQ 342 (447)
Q Consensus 265 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--q~~lL~~~ 342 (447)
.+.|+|.+|+... ..+++++.+.+. +.+++.... .... ..++|+.+.+|.| ..++|..+
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~--------~~~~----~~~~~v~~~~~~~~~~~~~l~~a 248 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYE--------VAKN----SYNENVEIRRITTDNFKELIKNA 248 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCC--------CCcc----ccCCCEEEEECChHHHHHHHHhC
Confidence 4568888888542 344666766553 223322110 1111 1347999999997 34677887
Q ss_pred ccceeeeccChhhHHHHHHhCCceeecCccc--hhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhH
Q 037999 343 AIGGFLTHSGWNSTLESLVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 343 ~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~ 411 (447)
++ ||||||++|++|++++|+|++++|..+ ||..||+.+++ .|+|+.+. +++ ++.+++.+++++
T Consensus 249 d~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~~---~~~~~~~~~~~~ 314 (321)
T TIGR00661 249 EL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKEL---RLLEAILDIRNM 314 (321)
T ss_pred CE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhhH---HHHHHHHhcccc
Confidence 77 999999999999999999999999955 89999999977 69999986 333 555555555555
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=1.5e-14 Score=138.91 Aligned_cols=146 Identities=18% Similarity=0.226 Sum_probs=107.9
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcC-CC-eeEecccChH-HHh
Q 037999 264 SRSVLYVSFGSFIKLGREQ-ILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTK-ER-GCIVSWAPQE-EVL 339 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~pq~-~lL 339 (447)
++++|+|..||+.....++ +.++...+.+ ...+++..+.+. .+....... .+ +.+.+|..++ .++
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~----------~~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND----------LEELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch----------HHHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 5688999999998654433 4445555554 577788775331 111111111 22 7777999885 688
Q ss_pred cccccceeeeccChhhHHHHHHhCCceeecCc-cc---hhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhH--h
Q 037999 340 AHQAIGGFLTHSGWNSTLESLVAGVPMICWPQ-IG---DQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN--K 412 (447)
Q Consensus 340 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~-~~---DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~--~ 412 (447)
..+++ +||++|.+|+.|.+++|+|+|.+|. .+ ||..||+.+++ .|.|..++ .+++.+++.+.|.+++.+ +
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~ 327 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSELTPEKLAELILRLLSNPEK 327 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEeccccCCHHHHHHHHHHHhcCHHH
Confidence 88888 9999999999999999999999999 44 89999999977 59999998 688999999999999983 2
Q ss_pred HHHHHHHHHHH
Q 037999 413 RDKIMESTVQI 423 (447)
Q Consensus 413 ~~~~~~~a~~~ 423 (447)
-.+|+++++++
T Consensus 328 l~~m~~~a~~~ 338 (357)
T COG0707 328 LKAMAENAKKL 338 (357)
T ss_pred HHHHHHHHHhc
Confidence 23444444443
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.57 E-value=1.4e-12 Score=127.69 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=79.3
Q ss_pred CeeEecccC-hHHHhcccccceeeeccChhhHHHHHHhCCceeecCc----cchhhHHHHHHHhhcceeeEeC-CCCCHH
Q 037999 326 RGCIVSWAP-QEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQ----IGDQQVNSRCVSEIWKIGLDMK-DTCDRS 399 (447)
Q Consensus 326 ~~~~~~~~p-q~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~~~~-~~~~~~ 399 (447)
++.+.+|+. ..+++..+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+ .|.|..+. +.++++
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHH
Confidence 477789984 4689999999 9999999999999999999999997 4689999999977 59999987 667899
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHH
Q 037999 400 TIENLVRDLMDNKRDKIMESTVQIA 424 (447)
Q Consensus 400 ~l~~ai~~~l~~~~~~~~~~a~~~~ 424 (447)
++.++|.++++| ++++++..+-+
T Consensus 313 ~l~~~i~~ll~~--~~~~~~~~~~~ 335 (357)
T PRK00726 313 KLAEKLLELLSD--PERLEAMAEAA 335 (357)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHH
Confidence 999999999997 66665544443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.53 E-value=4.8e-12 Score=123.37 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=95.8
Q ss_pred CCCeEEEEEecccccCCH-HHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEeccc-ChHHHhc
Q 037999 263 PSRSVLYVSFGSFIKLGR-EQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWA-PQEEVLA 340 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq~~lL~ 340 (447)
+++.+|++..|+...... +.+.+++..+.+.+..+++.++.. ....+.+.. +...+|+.+.+|. ...++|.
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g------~~~~l~~~~-~~~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG------DLEEVKKAY-EELGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc------cHHHHHHHH-hccCCCeEEeehhhhHHHHHH
Confidence 345566666666643222 223344455543344566666432 000111111 1124689999998 4467999
Q ss_pred ccccceeeeccChhhHHHHHHhCCceeecCc----cchhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhH
Q 037999 341 HQAIGGFLTHSGWNSTLESLVAGVPMICWPQ----IGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 341 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~ 411 (447)
.+++ +|+++|.+++.||+++|+|+|+.|. ..+|..|+..+.+ .|.|..+. +..+.+++.++|++++.+
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 9888 9999999999999999999999986 4678999999977 59999987 446899999999999985
No 34
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.44 E-value=4e-15 Score=129.13 Aligned_cols=135 Identities=13% Similarity=0.254 Sum_probs=93.6
Q ss_pred EEEEEecccccCCHHH-HHHHHHHHHh--CCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccC-hHHHhccc
Q 037999 267 VLYVSFGSFIKLGREQ-ILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAP-QEEVLAHQ 342 (447)
Q Consensus 267 vv~vs~Gs~~~~~~~~-~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q~~lL~~~ 342 (447)
+|+|+.||........ +..+...+.. ...+++++.+..... .....+ ...+.|+.+.+|.+ ..+++..+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~------~~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE------ELKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH------HHCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH------HHHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 4899999887422211 2223333332 247788888543111 000000 11226889999999 67899999
Q ss_pred ccceeeeccChhhHHHHHHhCCceeecCccc----hhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHHhH
Q 037999 343 AIGGFLTHSGWNSTLESLVAGVPMICWPQIG----DQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 343 ~~~~~ithgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l~~ 411 (447)
++ +|||||.+|++|++++|+|+|++|.-. +|..|+..+++ .|+|..+. ...+.+.|.++|.+++.+
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESELNPEELAEAIEELLSD 144 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCcccCCHHHHHHHHHHHHcC
Confidence 99 999999999999999999999999987 99999999977 59999987 667799999999999885
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.36 E-value=7e-10 Score=108.06 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=67.6
Q ss_pred ChHHHhcccccceeeeccChhhHHHHHHhCCceeecCcc---chhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHH
Q 037999 334 PQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQI---GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLM 409 (447)
Q Consensus 334 pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l 409 (447)
+-.++|..+++ ||+++|.++++||+++|+|+|+.|.- .+|..|+..+.+ .+.|..+. +..+.+++.+++.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEecccCCHHHHHHHHHHHH
Confidence 45678999998 99999988999999999999999873 467888888866 59998886 5668999999999999
Q ss_pred hHhHHHHHHH
Q 037999 410 DNKRDKIMES 419 (447)
Q Consensus 410 ~~~~~~~~~~ 419 (447)
.| ++.+++
T Consensus 320 ~~--~~~~~~ 327 (348)
T TIGR01133 320 LD--PANLEA 327 (348)
T ss_pred cC--HHHHHH
Confidence 86 554433
No 36
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.33 E-value=1.8e-10 Score=108.29 Aligned_cols=103 Identities=19% Similarity=0.194 Sum_probs=75.5
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccChH-HHhc
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQE-EVLA 340 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq~-~lL~ 340 (447)
+.|+|+||...... ....+++++.+. +.++.++++.. ....+.+.+ ...+|+.+..++++. ++|.
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~--------~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~ 240 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSS--------NPNLDELKKFAKEYPNIILFIDVENMAELMN 240 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCC--------CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHH
Confidence 45899998665433 334555666553 45677777532 112222221 124588989999986 7999
Q ss_pred ccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHH
Q 037999 341 HQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRC 381 (447)
Q Consensus 341 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 381 (447)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 241 ~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 241 EADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999 999999 9999999999999999999999999874
No 37
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.23 E-value=3.6e-09 Score=97.64 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=97.4
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHh-CCCc--EEEEEecCCCCCCCCCCCCChhhh----hhcC--CCeeEecccC
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVN-SGKR--FLWVIRSDLIDGEPGVGPVPVELE----QGTK--ERGCIVSWAP 334 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~p 334 (447)
.+--|+||-|.-. ...+.+...+.|-.. .+.+ .+.+.++ .+|..-. ...+ +++.+.+|-.
T Consensus 218 E~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP----------~MP~~~r~~l~~~A~~~p~i~I~~f~~ 286 (400)
T COG4671 218 EGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGP----------FMPEAQRQKLLASAPKRPHISIFEFRN 286 (400)
T ss_pred ccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCC----------CCCHHHHHHHHHhcccCCCeEEEEhhh
Confidence 3345888877655 344556666665544 3333 4444433 2343222 2223 7889999988
Q ss_pred h-HHHhcccccceeeeccChhhHHHHHHhCCceeecCcc---chhhHHHHHHHhhcceeeEeC-CCCCHHHHHHHHHHHH
Q 037999 335 Q-EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQI---GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLM 409 (447)
Q Consensus 335 q-~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~g~~~~-~~~~~~~l~~ai~~~l 409 (447)
+ ..++.-+.. +|+-||+||++|-|++|+|.+++|.. .+|-.-|.|+++ +|+--.+. +.+++..++++|...+
T Consensus 287 ~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~lt~~~La~al~~~l 363 (400)
T COG4671 287 DFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPENLTPQNLADALKAAL 363 (400)
T ss_pred hHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCcccCChHHHHHHHHhcc
Confidence 7 468888888 99999999999999999999999994 389999999965 89876666 8899999999999887
Q ss_pred h
Q 037999 410 D 410 (447)
Q Consensus 410 ~ 410 (447)
.
T Consensus 364 ~ 364 (400)
T COG4671 364 A 364 (400)
T ss_pred c
Confidence 6
No 38
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.21 E-value=1.2e-09 Score=107.62 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=82.8
Q ss_pred hHHHhcccccceeeeccChhhHHHHHHhCCceeec----Cccc---h------hhHHHHHHHhhcceeeEeC-CCCCHHH
Q 037999 335 QEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW----PQIG---D------QQVNSRCVSEIWKIGLDMK-DTCDRST 400 (447)
Q Consensus 335 q~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~----P~~~---D------Q~~na~~~~~~~g~g~~~~-~~~~~~~ 400 (447)
...++..+++ ||+-+|..|+ |++++|+|+|++ |+.. + |..|+..++++ ++...+. +.++++.
T Consensus 261 ~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~~~~~~~ 336 (385)
T TIGR00215 261 ARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQEECTPHP 336 (385)
T ss_pred HHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCCCCCHHH
Confidence 3468888888 9999999887 999999999999 7732 2 66788888764 8887776 7899999
Q ss_pred HHHHHHHHHhHhHH----HHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037999 401 IENLVRDLMDNKRD----KIMESTVQIAKMARDAVKEGGSSYRNLDKLI 445 (447)
Q Consensus 401 l~~ai~~~l~~~~~----~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 445 (447)
|.+.+.+++.| + +++++.++--..+++...++|.|.+.....+
T Consensus 337 l~~~~~~ll~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 337 LAIALLLLLEN--GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHHhcC--CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 99999999987 6 6666666666666666666788887766544
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.16 E-value=2.5e-08 Score=98.41 Aligned_cols=166 Identities=16% Similarity=0.140 Sum_probs=99.0
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHh----CCCcEEEEEecCCCCCCCCCCCCChhhhh-hc--------------C
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVN----SGKRFLWVIRSDLIDGEPGVGPVPVELEQ-GT--------------K 324 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~ 324 (447)
..++|.+--||......+.+..+++++.. .+..|++.+..+... ..+-..+.+ .. .
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-----~~~~~~l~~~g~~~~~~~~~~~~~~~~ 278 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-----EKLQAILEDLGWQLEGSSEDQTSLFQK 278 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-----HHHHHHHHhcCceecCCccccchhhcc
Confidence 34679999999864333333444444443 256788877322100 000000000 00 1
Q ss_pred CCeeEecccCh-HHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhh---cceeeEeCCCCCHHH
Q 037999 325 ERGCIVSWAPQ-EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEI---WKIGLDMKDTCDRST 400 (447)
Q Consensus 325 ~~~~~~~~~pq-~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~---~g~g~~~~~~~~~~~ 400 (447)
+++.+..+..+ .+++..+++ +|+-+|..| .|+...|+|+|.+|.-..|. |+....+. .|.++.+. ..+.+.
T Consensus 279 ~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~-~~~~~~ 353 (396)
T TIGR03492 279 GTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA-SKNPEQ 353 (396)
T ss_pred CceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC-CCCHHH
Confidence 23555555444 578999998 999999766 99999999999999767776 88655331 15566663 355699
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 037999 401 IENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKL 444 (447)
Q Consensus 401 l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 444 (447)
+.+++.+++.| ++.+++.. +..++...+++++.+-.+.+
T Consensus 354 l~~~l~~ll~d--~~~~~~~~---~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 354 AAQVVRQLLAD--PELLERCR---RNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHcC--HHHHHHHH---HHHHHhcCCCCHHHHHHHHH
Confidence 99999999987 55444433 22333334456665554433
No 40
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.06 E-value=6.1e-08 Score=95.70 Aligned_cols=135 Identities=15% Similarity=0.103 Sum_probs=91.2
Q ss_pred CCCeEEEEEecccccCCHHHH-HHHHHHHH-----hCCCcEEEEEecCCCCCCCCCCCCChhhhhh-cCCCeeEecccCh
Q 037999 263 PSRSVLYVSFGSFIKLGREQI-LEFWHGMV-----NSGKRFLWVIRSDLIDGEPGVGPVPVELEQG-TKERGCIVSWAPQ 335 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~-~~~~~~l~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq 335 (447)
+++++|++..|+........+ ..+...+. ..+.+++++.+.+ ..+-+.+.+. ...++.+.+|+++
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~--------~~~~~~L~~~~~~~~v~~~G~~~~ 275 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRN--------KKLQSKLESRDWKIPVKVRGFVTN 275 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCC--------HHHHHHHHhhcccCCeEEEecccc
Confidence 345677777776654333332 33332221 1235566666432 0111111111 1346888899987
Q ss_pred H-HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhh-HHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 336 E-EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQ-VNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 336 ~-~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
. +++..+++ ||+.+|-+|+.||+++|+|+|+.+....|. .|+..+.+ .|.|+.+ -+++++.++|.+++.+
T Consensus 276 ~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~---~~~~~la~~i~~ll~~ 347 (382)
T PLN02605 276 MEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFS---ESPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeec---CCHHHHHHHHHHHHcC
Confidence 4 68888888 999999999999999999999998766675 68888866 5999865 4789999999999974
No 41
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.02 E-value=4.7e-08 Score=96.47 Aligned_cols=132 Identities=15% Similarity=0.242 Sum_probs=94.2
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCCCCCCCCChhhh---hhcCCCeeEecccChH-HH
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELE---QGTKERGCIVSWAPQE-EV 338 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pq~-~l 338 (447)
++++|++..|+.... ..+..+++++.+. +.+++++.+.+. .+-+.+. +..++|+.+.+|+++. ++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l 270 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE--------ALKQSLEDLQETNPDALKVFGYVENIDEL 270 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH--------HHHHHHHHHHhcCCCcEEEEechhhHHHH
Confidence 456777877887632 2245566666543 466776664210 0111111 1233589999999874 79
Q ss_pred hcccccceeeeccChhhHHHHHHhCCceeec-CccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 339 LAHQAIGGFLTHSGWNSTLESLVAGVPMICW-PQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 339 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+..+++ ||+..|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|+|+.. -+.+++.++|.+++.|
T Consensus 271 ~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~---~~~~~l~~~i~~ll~~ 338 (380)
T PRK13609 271 FRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI---RDDEEVFAKTEALLQD 338 (380)
T ss_pred HHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE---CCHHHHHHHHHHHHCC
Confidence 999988 99999988999999999999985 666778889888865 5888765 3689999999999986
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.99 E-value=8.1e-07 Score=86.30 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=83.3
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHH---Hhc
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEE---VLA 340 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~ 340 (447)
+.+++..|+... ...+.+.++++.+.+. +..+++. +.. . ..+.+ +...+|+.+.+|+++.+ ++.
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~------~---~~~~~-~~~~~~v~~~g~~~~~~~~~~~~ 265 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDG------P---ARARL-EARYPNVHFLGFLDGEELAAAYA 265 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCC------c---hHHHH-hccCCcEEEEeccCHHHHHHHHH
Confidence 446677777653 3445555555555442 3444443 321 0 00111 12457899999999765 788
Q ss_pred ccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 341 HQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 341 ~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.+++ +|.++. .++++||+++|+|+|+.+..+ +...+.+ .+.|..+ ..-+.+++.++|.+++.+
T Consensus 266 ~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~-~~~~~~~l~~~i~~l~~~ 332 (364)
T cd03814 266 SADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLV-EPGDAEAFAAALAALLAD 332 (364)
T ss_pred hCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEc-CCCCHHHHHHHHHHHHcC
Confidence 8888 886654 378999999999999987654 3444544 4788777 445788899999999986
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.93 E-value=9e-08 Score=94.48 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=64.7
Q ss_pred HHHhcccccceeeeccChhhHHHHHHhCCceeecCccch--------hhHH-----HHHHHhhcceeeEeC-CCCCHHHH
Q 037999 336 EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGD--------QQVN-----SRCVSEIWKIGLDMK-DTCDRSTI 401 (447)
Q Consensus 336 ~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~D--------Q~~n-----a~~~~~~~g~g~~~~-~~~~~~~l 401 (447)
..++..+++ +|+.+|.+++ |++++|+|+|+.|...- |..| +..+.+ .+++..+. ...+++++
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcCCCCCHHHH
Confidence 568889888 9999998887 99999999999854321 2122 122222 13333333 56789999
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 037999 402 ENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKL 444 (447)
Q Consensus 402 ~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 444 (447)
.+++.++++| ++.+++..+-.+.+++.. ..|++.+.++.+
T Consensus 332 ~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i 371 (380)
T PRK00025 332 ARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAV 371 (380)
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHH
Confidence 9999999987 555544444433333333 345555555443
No 44
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.88 E-value=9e-06 Score=80.41 Aligned_cols=134 Identities=15% Similarity=0.177 Sum_probs=80.7
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCCh---hhhh--hcCCCeeEecccChHH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPV---ELEQ--GTKERGCIVSWAPQEE 337 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~pq~~ 337 (447)
..+++..|+... ...+.+.+.+..+.+. +..++++-+..... . ..... .+.+ ...+|+.+.+|+|+.+
T Consensus 220 ~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~---~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 295 (398)
T cd03800 220 KPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI---L-AMDEEELRELARELGVIDRVDFPGRVSRED 295 (398)
T ss_pred CcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcc---h-hhhhHHHHHHHHhcCCCceEEEeccCCHHH
Confidence 456677787663 3344444444444432 35555554321100 0 00000 0111 1346888899999865
Q ss_pred ---Hhcccccceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 338 ---VLAHQAIGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 338 ---lL~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
++..+++ ++... | -.+++||+++|+|+|+-...+ ....+.+ .+.|..++ .-+.+++.++|.+++.
T Consensus 296 ~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~-~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 296 LPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVD-PRDPEALAAALRRLLT 367 (398)
T ss_pred HHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeC-CCCHHHHHHHHHHHHh
Confidence 5788887 76442 2 368999999999999876543 3344544 36788774 3469999999999998
Q ss_pred H
Q 037999 411 N 411 (447)
Q Consensus 411 ~ 411 (447)
+
T Consensus 368 ~ 368 (398)
T cd03800 368 D 368 (398)
T ss_pred C
Confidence 5
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.83 E-value=2.5e-05 Score=77.58 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=56.9
Q ss_pred CCCeeEecccChHH---Hhcccccceeeec-cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 324 KERGCIVSWAPQEE---VLAHQAIGGFLTH-SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 324 ~~~~~~~~~~pq~~---lL~~~~~~~~ith-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
.+++.+.+++|+.+ ++..+++-.+.+. .|. .+++||+++|+|+|+... ......+.+ -..|..+ ..-+.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~-~~~G~lv-~~~d~ 353 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITD-GENGLLV-DFFDP 353 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhccc-CCceEEc-CCCCH
Confidence 36788889999865 6677777222232 222 489999999999998643 334444433 2467766 34569
Q ss_pred HHHHHHHHHHHhH
Q 037999 399 STIENLVRDLMDN 411 (447)
Q Consensus 399 ~~l~~ai~~~l~~ 411 (447)
++++++|.+++.+
T Consensus 354 ~~la~~i~~ll~~ 366 (396)
T cd03818 354 DALAAAVIELLDD 366 (396)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999986
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.80 E-value=1.3e-05 Score=77.51 Aligned_cols=131 Identities=19% Similarity=0.180 Sum_probs=79.7
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHH---Hhc
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEE---VLA 340 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~ 340 (447)
.+.+++..|+... ...+.+.+++..+.+.+.++++.-... . ...........+++.+.+|+++.+ ++.
T Consensus 190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~-~-------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGL-E-------LEEESYELEGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred CceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCch-h-------hhHHHHhhcCCCeEEEeCCCCHHHHHHHHH
Confidence 4456777788653 334444444444444345555442211 0 000000002347888999998654 688
Q ss_pred ccccceeeec----cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 341 HQAIGGFLTH----SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 341 ~~~~~~~ith----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.+++ +|.. .|. .++.||+++|+|+|+.+.. .+...+.+ .+.|..+. .-+.+++.+++.+++++
T Consensus 262 ~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~-~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 262 EIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFP-PGDAEDLAAALERLIDD 329 (359)
T ss_pred hCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEEC-CCCHHHHHHHHHHHHhC
Confidence 8888 6632 333 4799999999999987643 34444533 25677773 44689999999999985
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.75 E-value=1.4e-05 Score=78.05 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=80.7
Q ss_pred CCeEEEEEeccccc-CCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCCCCCC-CCChhhhhhcCCCeeEecccChHH---
Q 037999 264 SRSVLYVSFGSFIK-LGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVG-PVPVELEQGTKERGCIVSWAPQEE--- 337 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pq~~--- 337 (447)
.++.+++..|+... ...+.+.+.+..+.+. +.++++ ++.. ... .+.+.......+|+.+.+++++.+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 290 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDG------PEKEELKELAKALGLDNVTFLGRVPKEELPE 290 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCc------ccHHHHHHHHHHcCCCcEEEeCCCChHHHHH
Confidence 34567777888763 3445555555555444 445444 3221 100 011100112346888899998754
Q ss_pred HhcccccceeeeccC---------hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHH
Q 037999 338 VLAHQAIGGFLTHSG---------WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDL 408 (447)
Q Consensus 338 lL~~~~~~~~ithgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~ 408 (447)
++..+++ +|.... -+++.||+++|+|+|+.+..+.+... .+ .+.|..+. .-+.+++.++|.++
T Consensus 291 ~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~-~~~g~~~~-~~~~~~l~~~i~~~ 362 (394)
T cd03794 291 LLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV----EE-AGAGLVVP-PGDPEALAAAILEL 362 (394)
T ss_pred HHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhh----cc-CCcceEeC-CCCHHHHHHHHHHH
Confidence 6788888 554322 23479999999999998876654432 23 25676663 34789999999999
Q ss_pred HhH
Q 037999 409 MDN 411 (447)
Q Consensus 409 l~~ 411 (447)
+.|
T Consensus 363 ~~~ 365 (394)
T cd03794 363 LDD 365 (394)
T ss_pred HhC
Confidence 975
No 48
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.75 E-value=2.3e-07 Score=91.90 Aligned_cols=132 Identities=17% Similarity=0.233 Sum_probs=92.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHh--CCCcEEEEEecCCCCCCCCCCCCChhhhhh--cCCCeeEecccChH-HH
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELEQG--TKERGCIVSWAPQE-EV 338 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~-~l 338 (447)
++++|+++.|+.... ..+..+++++.+ .+.+++++.+.+ ..+-+.+.+. ..+++.+.+|..+. ++
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~--------~~l~~~l~~~~~~~~~v~~~G~~~~~~~~ 270 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKS--------KELKRSLTAKFKSNENVLILGYTKHMNEW 270 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCC--------HHHHHHHHHHhccCCCeEEEeccchHHHH
Confidence 456788888987631 223444444322 235666665422 0111112111 23578888999764 68
Q ss_pred hcccccceeeeccChhhHHHHHHhCCceeec-CccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 339 LAHQAIGGFLTHSGWNSTLESLVAGVPMICW-PQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 339 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+..+++ ||+..|..|+.||+++|+|+|+. |.-++|..|+..+.+ .|+|+... +.+++.++|.++++|
T Consensus 271 ~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~---~~~~l~~~i~~ll~~ 338 (391)
T PRK13608 271 MASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD---TPEEAIKIVASLTNG 338 (391)
T ss_pred HHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC---CHHHHHHHHHHHhcC
Confidence 999999 99998888999999999999998 666667789999876 59998763 688999999999975
No 49
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.74 E-value=1.4e-05 Score=81.22 Aligned_cols=126 Identities=19% Similarity=0.180 Sum_probs=76.8
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCCCCCCCCChhhhhh-cCCCeeEecccChHH---Hhcc
Q 037999 267 VLYVSFGSFIKLGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELEQG-TKERGCIVSWAPQEE---VLAH 341 (447)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~~---lL~~ 341 (447)
.+++..|+... ...+..+++++.+. +.+++++ +. |. ..+.+.+. ...++.+.+|+++.+ ++..
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~------G~---~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~ 331 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GD------GP---YREELEKMFAGTPTVFTGMLQGDELSQAYAS 331 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eC------Ch---HHHHHHHHhccCCeEEeccCCHHHHHHHHHH
Confidence 34566677652 23355566666665 3555544 32 11 11122111 124788889998654 7788
Q ss_pred cccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHh--hcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 342 QAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSE--IWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 342 ~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~--~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+++ ||.-.. -++++||+++|+|+|+....+ ....+.+ .-+.|..+. .-+.+++.++|.++++|
T Consensus 332 aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~-~~d~~~la~~i~~ll~~ 400 (465)
T PLN02871 332 GDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYT-PGDVDDCVEKLETLLAD 400 (465)
T ss_pred CCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeC-CCCHHHHHHHHHHHHhC
Confidence 888 775443 347899999999999876432 1222322 136787774 34789999999999985
No 50
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.65 E-value=0.00012 Score=72.96 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=57.8
Q ss_pred CCCeeEecccChH---HHhcccccceeeec---cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCC
Q 037999 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH---SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTC 396 (447)
Q Consensus 324 ~~~~~~~~~~pq~---~lL~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 396 (447)
.+++.+.+++++. .+|..+++ ||.. -|+ .+++||+++|+|+|+....+ ....+.+ -+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~-~~~g~~~~-~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVAD-GETGLLVD-GH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhcc-CCceEECC-CC
Confidence 4688999999875 47888887 6532 233 58999999999999865432 2233433 35677763 34
Q ss_pred CHHHHHHHHHHHHhH
Q 037999 397 DRSTIENLVRDLMDN 411 (447)
Q Consensus 397 ~~~~l~~ai~~~l~~ 411 (447)
+.++++++|.+++++
T Consensus 354 d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 354 DPADWADALARLLDD 368 (405)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999985
No 51
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.64 E-value=0.00012 Score=73.06 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=61.6
Q ss_pred CCeeEecccChHH---HhcccccceeeeccCh------hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCC
Q 037999 325 ERGCIVSWAPQEE---VLAHQAIGGFLTHSGW------NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (447)
Q Consensus 325 ~~~~~~~~~pq~~---lL~~~~~~~~ithgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 395 (447)
+|+.+.+|+|+.+ ++..+++..+.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+ ..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~-~~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCV-EP 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEe-CC
Confidence 4788889998754 7888888555555332 3478999999999998653311 11122 3 567776 34
Q ss_pred CCHHHHHHHHHHHHhH--hHHHHHHHHHHH
Q 037999 396 CDRSTIENLVRDLMDN--KRDKIMESTVQI 423 (447)
Q Consensus 396 ~~~~~l~~ai~~~l~~--~~~~~~~~a~~~ 423 (447)
-+.++++++|.+++++ ....+++++++.
T Consensus 358 ~d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 387 (412)
T PRK10307 358 ESVEALVAAIAALARQALLRPKLGTVAREY 387 (412)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 5789999999999875 223455555443
No 52
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.63 E-value=4.6e-05 Score=76.14 Aligned_cols=90 Identities=19% Similarity=0.299 Sum_probs=60.0
Q ss_pred CCeeEe-cccChHH---Hhcccccceeee----ccC---hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 325 ERGCIV-SWAPQEE---VLAHQAIGGFLT----HSG---WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 325 ~~~~~~-~~~pq~~---lL~~~~~~~~it----hgG---~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
+|+... +|+|..+ +|..+++ ++. .-| -++++||+++|+|+|+... ......+.+ -+.|..+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVF- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEE-
Confidence 455555 7888654 6788888 653 112 3479999999999998643 233344534 3678877
Q ss_pred CCCCHHHHHHHHHHHHhH-----hHHHHHHHHHHHH
Q 037999 394 DTCDRSTIENLVRDLMDN-----KRDKIMESTVQIA 424 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l~~-----~~~~~~~~a~~~~ 424 (447)
+ +.++++++|.++++| +...|++++++.+
T Consensus 366 ~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 366 G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 3 799999999999886 1244555554443
No 53
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.63 E-value=6e-05 Score=75.93 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=56.9
Q ss_pred cCCCeeEecccChHHH---hccc--ccceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 323 TKERGCIVSWAPQEEV---LAHQ--AIGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~l---L~~~--~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
..+++...+++++.++ +..+ +..+||... | -.+++||+++|+|+|+....+ ....+.+ -..|..+
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~-~~~G~lv- 388 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIAN-CRNGLLV- 388 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcC-CCcEEEe-
Confidence 3467888888887654 5544 123487653 3 359999999999999875432 3333433 2467766
Q ss_pred CCCCHHHHHHHHHHHHhH
Q 037999 394 DTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l~~ 411 (447)
..-+.++++++|.++++|
T Consensus 389 ~~~d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 389 DVLDLEAIASALEDALSD 406 (439)
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 345789999999999986
No 54
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=98.60 E-value=8.5e-09 Score=86.34 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=68.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHh------Hhhhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCS------DKPVS 74 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~------~~~~~ 74 (447)
++.||++|.+|||+|++++++.+.+.+.+. |+.|.+++... ... ........+.. .....
T Consensus 15 ~lala~~L~~rGh~V~~~~~~~~~~~v~~~-----------Gl~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 80 (139)
T PF03033_consen 15 FLALARALRRRGHEVRLATPPDFRERVEAA-----------GLEFVPIPGDS-RLP--RSLEPLANLRRLARLIRGLEEA 80 (139)
T ss_dssp HHHHHHHHHHTT-EEEEEETGGGHHHHHHT-----------T-EEEESSSCG-GGG--HHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEeecccceeccccc-----------CceEEEecCCc-CcC--cccchhhhhhhHHHHhhhhhHH
Confidence 478999999999999999999999998777 89999997440 000 00001111111 11112
Q ss_pred HHHHHHHHhC----CC--CCCcEEEECCCcchHHHHHHHcCCCeEEEcCCchhH
Q 037999 75 KLAFLQLLMS----PG--LLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHC 122 (447)
Q Consensus 75 ~~~l~~ll~~----~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 122 (447)
...+.+...+ .+ ...|+++.+.....+..+|+++|||++.....+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~~ 134 (139)
T PF03033_consen 81 MRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWFA 134 (139)
T ss_dssp HHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGGS
T ss_pred HHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcCc
Confidence 2222222222 11 157888888888889999999999999987766543
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.59 E-value=0.00028 Score=67.83 Aligned_cols=134 Identities=20% Similarity=0.293 Sum_probs=80.0
Q ss_pred CCeEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChh-hh-hhcCCCeeEecccCh-HH
Q 037999 264 SRSVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVE-LE-QGTKERGCIVSWAPQ-EE 337 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~pq-~~ 337 (447)
.++.+++..|+... ...+.+.+.++.+.+. +.++++.-+.. .. ...... .. .....++.+.++..+ ..
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~-~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGD-EE-----NPAAILEIEKLGLEGRVEFLGFRDDVPE 259 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCC-cc-----hhhHHHHHHhcCCcceEEEeeccccHHH
Confidence 34567788888763 3445555555555542 34444433211 10 000000 00 112357777777554 46
Q ss_pred HhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 338 VLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 338 lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
++..+++ +|.... -++++||+++|+|+|+-+..+ +...+.+ .+.|..+ ..-+.+++.++|.+++.+
T Consensus 260 ~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~-~~~~~~~~~~~i~~l~~~ 329 (359)
T cd03808 260 LLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLV-PPGDAEALADAIERLIED 329 (359)
T ss_pred HHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEE-CCCCHHHHHHHHHHHHhC
Confidence 8888888 665443 478999999999999865433 2334433 3677766 344689999999998875
No 56
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.58 E-value=0.00011 Score=71.45 Aligned_cols=142 Identities=17% Similarity=0.257 Sum_probs=83.9
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhhh-----hcCCCeeEecccChHH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELEQ-----GTKERGCIVSWAPQEE 337 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pq~~ 337 (447)
+.+++..|+... ...+.+.+++..+.+. +.++++.-+.+ ..+.+.+ ...+|+.+.+++|+.+
T Consensus 202 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~----------~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 271 (374)
T cd03817 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP----------EREELEELARELGLADRVIFTGFVPREE 271 (374)
T ss_pred CeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc----------hHHHHHHHHHHcCCCCcEEEeccCChHH
Confidence 456677787653 3445555555555442 34444443211 0111111 2346888999999764
Q ss_pred ---Hhcccccceeeecc----ChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 338 ---VLAHQAIGGFLTHS----GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 338 ---lL~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
++.++++ +|..+ .-+++.||+++|+|+|+.... ..+..+.+ .+.|..+.. -+. ++.+++.++++
T Consensus 272 ~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~-~~~g~~~~~-~~~-~~~~~i~~l~~ 342 (374)
T cd03817 272 LPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVAD-GENGFLFPP-GDE-ALAEALLRLLQ 342 (374)
T ss_pred HHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhheec-CceeEEeCC-CCH-HHHHHHHHHHh
Confidence 6788888 66433 247899999999999987543 33444434 367777742 222 89999999998
Q ss_pred Hh--HHHHHHHHHHHHHH
Q 037999 411 NK--RDKIMESTVQIAKM 426 (447)
Q Consensus 411 ~~--~~~~~~~a~~~~~~ 426 (447)
+. ...+++++++..+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 343 DPELRRRLSKNAEESAEK 360 (374)
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 51 12344444444443
No 57
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.53 E-value=9.2e-05 Score=72.37 Aligned_cols=81 Identities=22% Similarity=0.279 Sum_probs=60.1
Q ss_pred cCCCeeEecccChHH---Hhcccccceeeecc----------ChhhHHHHHHhCCceeecCccchhhHHHHHHHhhccee
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS----------GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~ithg----------G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g 389 (447)
..+++.+.+++|+.+ ++..+++ ||... --+++.||+++|+|+|+-+..+ +...+.+ .+.|
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g 315 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETG 315 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCee
Confidence 357888889998754 5888888 55322 2479999999999999876643 4444544 3778
Q ss_pred eEeCCCCCHHHHHHHHHHHHhH
Q 037999 390 LDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 390 ~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
..++ .-+.+++.++|.+++.+
T Consensus 316 ~~~~-~~d~~~l~~~i~~l~~~ 336 (367)
T cd05844 316 LLVP-EGDVAALAAALGRLLAD 336 (367)
T ss_pred EEEC-CCCHHHHHHHHHHHHcC
Confidence 7773 45789999999999985
No 58
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.52 E-value=0.00029 Score=67.81 Aligned_cols=81 Identities=20% Similarity=0.297 Sum_probs=59.7
Q ss_pred cCCCeeEecccChH---HHhcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCC
Q 037999 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (447)
Q Consensus 323 ~~~~~~~~~~~pq~---~lL~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 395 (447)
..+++.+.+++++. .++..+++ +|.- |.-+++.||+++|+|+|+.+. ......+.+ -+.|..+ ..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~-~~ 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLV-PP 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEe-CC
Confidence 45788999999754 47888887 6632 445799999999999998765 234444533 3677776 44
Q ss_pred CCHHHHHHHHHHHHhH
Q 037999 396 CDRSTIENLVRDLMDN 411 (447)
Q Consensus 396 ~~~~~l~~ai~~~l~~ 411 (447)
.+.+++.++|.+++.+
T Consensus 326 ~~~~~l~~~i~~~~~~ 341 (374)
T cd03801 326 GDPEALAEAILRLLDD 341 (374)
T ss_pred CCHHHHHHHHHHHHcC
Confidence 4689999999999885
No 59
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.52 E-value=6e-05 Score=73.21 Aligned_cols=129 Identities=16% Similarity=0.169 Sum_probs=79.6
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCC-CcEEEEEecCCCCCCCCCCCCChhhh-----hhcCCCeeEecccChH---
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELE-----QGTKERGCIVSWAPQE--- 336 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pq~--- 336 (447)
..+++..|+... ......+++++.+.. ..+++.-. |. ....+. ....+|+.+.+|+|+.
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~-------g~---~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGE-------GP---LEAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeC-------Ch---hHHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 346677777652 123444566665555 44444432 11 111111 1234789999999975
Q ss_pred HHhcccccceeeec---cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 337 EVLAHQAIGGFLTH---SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 337 ~lL~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.++..+++..+.++ -|. .++.||+++|+|+|+....+....... +. +.|..+ ..-+.+++.++|.+++++
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~-~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVV-PPGDPAALAEAIRRLLED 332 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEe-CCCCHHHHHHHHHHHHHC
Confidence 47777888333332 333 479999999999999765554433321 12 667666 345799999999999985
No 60
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.50 E-value=0.00011 Score=72.79 Aligned_cols=80 Identities=15% Similarity=0.157 Sum_probs=56.9
Q ss_pred cCCCeeEecccChH---HHhcccccceeeec---cC-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCC
Q 037999 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTH---SG-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (447)
Q Consensus 323 ~~~~~~~~~~~pq~---~lL~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 395 (447)
..+++.+.+++|+. .++..+++ ++.. -| -.+++||+++|+|+|+.-..+ ....+.+ .+.|..+.
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~-~~~g~~~~-- 348 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVD-GETGFLCE-- 348 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhcc-CCceEEeC--
Confidence 34689999999986 46777777 6532 12 257899999999999874433 2233433 25676663
Q ss_pred CCHHHHHHHHHHHHhH
Q 037999 396 CDRSTIENLVRDLMDN 411 (447)
Q Consensus 396 ~~~~~l~~ai~~~l~~ 411 (447)
.+.+++.++|.+++++
T Consensus 349 ~~~~~~a~~i~~l~~~ 364 (392)
T cd03805 349 PTPEEFAEAMLKLAND 364 (392)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 3789999999999985
No 61
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.48 E-value=0.00031 Score=67.26 Aligned_cols=88 Identities=20% Similarity=0.285 Sum_probs=59.8
Q ss_pred CCCeeEecccCh-HHHhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 324 ~~~~~~~~~~pq-~~lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
..++.+.++... ..++..+++ +|.... -++++||+++|+|+|+.+..+.+.. +.+....|..+ +..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~-~~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLV-PNGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEe-CCCCH
Confidence 456777777443 468888887 665542 4689999999999998765443322 32431277777 44568
Q ss_pred HHHHHHHHHHHhHhHHHHHHHH
Q 037999 399 STIENLVRDLMDNKRDKIMEST 420 (447)
Q Consensus 399 ~~l~~ai~~~l~~~~~~~~~~a 420 (447)
+++.++|.+++.| ++.+++.
T Consensus 307 ~~~~~~i~~ll~~--~~~~~~~ 326 (348)
T cd03820 307 EALAEALLRLMED--EELRKRM 326 (348)
T ss_pred HHHHHHHHHHHcC--HHHHHHH
Confidence 9999999999986 5444433
No 62
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.48 E-value=0.00043 Score=67.11 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=56.2
Q ss_pred cCCCeeEecccChHH---Hhcccccceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCC
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 395 (447)
..+++.+.+|+++.+ ++..+++ +|... | -+++.||+++|+|+|+.+..+ ....+ .. +.|.....
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~-~~-~~~~~~~~- 330 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELI-EY-GCGWVVDD- 330 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHh-hc-CceEEeCC-
Confidence 347888899999654 5788777 55432 2 468999999999999975432 33334 33 66766642
Q ss_pred CCHHHHHHHHHHHHhH
Q 037999 396 CDRSTIENLVRDLMDN 411 (447)
Q Consensus 396 ~~~~~l~~ai~~~l~~ 411 (447)
+.+++.++|.+++.+
T Consensus 331 -~~~~~~~~i~~l~~~ 345 (375)
T cd03821 331 -DVDALAAALRRALEL 345 (375)
T ss_pred -ChHHHHHHHHHHHhC
Confidence 349999999999986
No 63
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.46 E-value=0.00044 Score=67.69 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=62.2
Q ss_pred CCCeeEecccCh-HHHhcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 324 ~~~~~~~~~~pq-~~lL~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
.+++.+.++.++ ..++..+++ +|.- +.-.++.||+++|+|+|+.... .....+.+ -..|..++ .-+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~-~~~G~~~~-~~~~ 323 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKH-GETGFLVD-VGDV 323 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcC-CCceEEcC-CCCH
Confidence 467888888776 468888888 6632 2346999999999999986443 34444533 25676663 3478
Q ss_pred HHHHHHHHHHHhH--hHHHHHHHHHHH
Q 037999 399 STIENLVRDLMDN--KRDKIMESTVQI 423 (447)
Q Consensus 399 ~~l~~ai~~~l~~--~~~~~~~~a~~~ 423 (447)
+++.++|.+++.+ ...++++++++.
T Consensus 324 ~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 324 EAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999974 223445555544
No 64
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.46 E-value=0.00045 Score=66.73 Aligned_cols=134 Identities=16% Similarity=0.233 Sum_probs=80.5
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccChH---HH
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQE---EV 338 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq~---~l 338 (447)
...+++..|+... ...+.+.++++.+.+.+..+.+.+-+. +.....-....+ ...+|+.+.+++++. .+
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGD-----GPLREALEALAAELGLEDRVTFLGAVPHEEVPAY 275 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcC-----CcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHH
Confidence 3456777787663 344555555555544333344433221 110000001111 134688999999975 46
Q ss_pred hcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 339 LAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 339 L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+..+++ +|.. +.-++++||+++|+|+|+-+..+ ....+.+ .+.|..+ ..-+.+++.++|.+++++
T Consensus 276 ~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~-~~~g~~~-~~~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 276 YAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITD-GENGLLV-PPGDPEALAEAILRLLAD 344 (377)
T ss_pred HHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcC-CcceeEE-CCCCHHHHHHHHHHHhcC
Confidence 777777 5522 34578999999999999876543 3334434 3556666 455799999999999986
No 65
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.44 E-value=7.1e-05 Score=73.44 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=72.5
Q ss_pred CCCeeEecccChH---HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHH
Q 037999 324 KERGCIVSWAPQE---EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRST 400 (447)
Q Consensus 324 ~~~~~~~~~~pq~---~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 400 (447)
.+|+.+.+.+++. .++.++++ +|+-.|. .+.||+++|+|+|..+..++++. +.+ .|.+..+. .+.++
T Consensus 254 ~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~--~d~~~ 323 (365)
T TIGR00236 254 SKRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG--TDKEN 323 (365)
T ss_pred CCCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC--CCHHH
Confidence 3578888766654 46677776 8987764 47999999999999976665553 223 37776552 47899
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037999 401 IENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLI 445 (447)
Q Consensus 401 l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 445 (447)
|.+++.+++.+ +..+++..+-.. -..+|+++.+-++.+.
T Consensus 324 i~~ai~~ll~~--~~~~~~~~~~~~----~~g~~~a~~ri~~~l~ 362 (365)
T TIGR00236 324 ITKAAKRLLTD--PDEYKKMSNASN----PYGDGEASERIVEELL 362 (365)
T ss_pred HHHHHHHHHhC--hHHHHHhhhcCC----CCcCchHHHHHHHHHH
Confidence 99999999987 655555433322 1244677777666553
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.42 E-value=0.0012 Score=63.93 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=83.4
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhh---hh--hcCCCeeEecccCh-
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVEL---EQ--GTKERGCIVSWAPQ- 335 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~pq- 335 (447)
+..+++..|.... ...+.+.+++..+.+. +.+++++ +.... ...+...+ .. ...+++.+.+|.+.
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~iv-G~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIV-GDAQG-----RRFYYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEE-ECCcc-----cchHHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 3456677777653 3456666666666553 3444443 32110 00111111 01 23467888888554
Q ss_pred HHHhcccccceeeec--cC-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh-H
Q 037999 336 EEVLAHQAIGGFLTH--SG-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD-N 411 (447)
Q Consensus 336 ~~lL~~~~~~~~ith--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~-~ 411 (447)
..++..+++..+-++ -| -++++||+++|+|+|+.-..+ ....+.+ -+.|..++ .-+.+++.++|..++. +
T Consensus 258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~-~~~g~~~~-~~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRP-GETGLLVP-PGDAEALAQALDQILSLL 331 (355)
T ss_pred HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhC-CCceEEeC-CCCHHHHHHHHHHHHhhC
Confidence 468888888333331 23 369999999999999865432 3334433 24777773 4578999999976654 2
Q ss_pred --hHHHHHHHHHHHH
Q 037999 412 --KRDKIMESTVQIA 424 (447)
Q Consensus 412 --~~~~~~~~a~~~~ 424 (447)
+..+++++|++..
T Consensus 332 ~~~~~~~~~~a~~~~ 346 (355)
T cd03819 332 PEGRAKMFAKARMCV 346 (355)
T ss_pred HHHHHHHHHHHHHHH
Confidence 2334445544443
No 67
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.37 E-value=0.00035 Score=69.42 Aligned_cols=130 Identities=15% Similarity=0.199 Sum_probs=74.6
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhhhh--cCCCeeEecccChH---
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELEQG--TKERGCIVSWAPQE--- 336 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~--- 336 (447)
+..+++..|.... .+.+.+.+.+..+.+. +..++++ +. |.....-....++ ..+++.+.+|+|+.
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~------g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~ 264 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIG-GD------GPKRILLEEMREKYNLQDRVELLGAVPHERVR 264 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEE-eC------CchHHHHHHHHHHhCCCCeEEEeCCCCHHHHH
Confidence 3457777787753 3444455554444432 3344443 21 1100000111111 34678888999865
Q ss_pred HHhcccccceeeecc---Ch-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 337 EVLAHQAIGGFLTHS---GW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 337 ~lL~~~~~~~~ithg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.++..+++ ||.-. |. .+++||+++|+|+|+-+..+- ...+ .. |.+... . .+.+++.+++.+++.+
T Consensus 265 ~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i-~~-~~~~~~-~-~~~~~l~~~l~~~l~~ 333 (398)
T cd03796 265 DVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVL-PP-DMILLA-E-PDVESIVRKLEEAISI 333 (398)
T ss_pred HHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhhe-eC-Cceeec-C-CCHHHHHHHHHHHHhC
Confidence 47778887 65422 33 499999999999999766432 2233 32 433333 2 3789999999999873
No 68
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.33 E-value=2.3e-05 Score=76.71 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=82.6
Q ss_pred CCeEEEEEecccccC-CHHHHHHHHHHHHhCCC-cEEEEEecCCCCCCCCCCCCChhhhhhc---CCCeeEecccChH--
Q 037999 264 SRSVLYVSFGSFIKL-GREQILEFWHGMVNSGK-RFLWVIRSDLIDGEPGVGPVPVELEQGT---KERGCIVSWAPQE-- 336 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~pq~-- 336 (447)
+++.|++++|..... ..+.+..+++++.+... ++.+++..... +. ..+.+ ...+. .+|+.+.+..++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~---~~-~~l~~-~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR---TR-PRIRE-AGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC---hH-HHHHH-HHHhhccCCCCEEEECCcCHHHH
Confidence 356778888877643 34557777777766532 24444322100 00 01111 11111 3678777766554
Q ss_pred -HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 337 -EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 337 -~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.++..+++ ||+..| |.+.||++.|+|+|.++.. |. +..+.+ .|++..+. -+.++|.++|.+++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~--~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG--TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC--CCHHHHHHHHHHHhcC
Confidence 45667777 999999 7788999999999998643 22 333434 37776663 2589999999999986
No 69
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.33 E-value=0.00052 Score=66.80 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=57.3
Q ss_pred cCCCeeEecccC-hH---HHhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 323 TKERGCIVSWAP-QE---EVLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 323 ~~~~~~~~~~~p-q~---~lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
...++...+|++ +. .++..+++ ++.... .+++.||+++|+|+|+....+ ....+.+ .+.|..+ .
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~-~~~g~~~-~ 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDH-GVTGYLA-K 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeC-CCceEEe-C
Confidence 346788889998 43 46888888 777543 479999999999999865422 1223323 2466665 3
Q ss_pred CCCHHHHHHHHHHHHhH
Q 037999 395 TCDRSTIENLVRDLMDN 411 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~ 411 (447)
..+.+++.+++.+++++
T Consensus 314 ~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 314 PGDPEDLAEGIEWLLAD 330 (365)
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 45789999999999985
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.32 E-value=0.00053 Score=68.75 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=57.1
Q ss_pred CeeEecccCh-HHHhcccccceeeec-----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHH
Q 037999 326 RGCIVSWAPQ-EEVLAHQAIGGFLTH-----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (447)
Q Consensus 326 ~~~~~~~~pq-~~lL~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 399 (447)
++.+.+...+ ..++..+++ ++.. +|..++.||+++|+|+|+-|..+++......+.+ .|+++.. -+.+
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~---~d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQV---EDAE 376 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEE---CCHH
Confidence 3444444433 356777776 3321 3444699999999999999998888887776644 3766654 3689
Q ss_pred HHHHHHHHHHhH
Q 037999 400 TIENLVRDLMDN 411 (447)
Q Consensus 400 ~l~~ai~~~l~~ 411 (447)
++.++|.++++|
T Consensus 377 ~La~~l~~ll~~ 388 (425)
T PRK05749 377 DLAKAVTYLLTD 388 (425)
T ss_pred HHHHHHHHHhcC
Confidence 999999999985
No 71
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.32 E-value=0.0011 Score=71.86 Aligned_cols=93 Identities=16% Similarity=0.205 Sum_probs=60.3
Q ss_pred CCCeeEecccChHH---Hhcccc--cceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 324 KERGCIVSWAPQEE---VLAHQA--IGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 324 ~~~~~~~~~~pq~~---lL~~~~--~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
.+++.+.+++++.+ ++..++ .++||.-. | -.+++||+++|+|+|+-...+ ....+ +.-..|+.+ .
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLV-d 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLV-D 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEE-C
Confidence 46788889988765 455442 12377642 3 369999999999999986533 11223 222457766 3
Q ss_pred CCCHHHHHHHHHHHHhH--hHHHHHHHHHH
Q 037999 395 TCDRSTIENLVRDLMDN--KRDKIMESTVQ 422 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~--~~~~~~~~a~~ 422 (447)
.-+.++|+++|.+++.| ...+|.+++++
T Consensus 621 P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 621 PHDQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 45789999999999985 12344444443
No 72
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.30 E-value=0.0015 Score=63.43 Aligned_cols=80 Identities=18% Similarity=0.264 Sum_probs=56.2
Q ss_pred cCCCeeEe-cccChH---HHhcccccceeee--c----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEe
Q 037999 323 TKERGCIV-SWAPQE---EVLAHQAIGGFLT--H----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDM 392 (447)
Q Consensus 323 ~~~~~~~~-~~~pq~---~lL~~~~~~~~it--h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~ 392 (447)
..+|+.+. +|+|+. .++..+++ +|. + +.-++++||+++|+|+|+.+..+ ...+.+ -+.|..+
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~ 316 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLV 316 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEE
Confidence 34678877 458864 57778777 553 2 22468999999999999977654 222333 3667666
Q ss_pred CCCCCHHHHHHHHHHHHhH
Q 037999 393 KDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 393 ~~~~~~~~l~~ai~~~l~~ 411 (447)
. .-+.+++.+++.+++++
T Consensus 317 ~-~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 317 P-PGDPAALAEAIRRLLAD 334 (366)
T ss_pred c-CCCHHHHHHHHHHHHcC
Confidence 3 34689999999999985
No 73
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.27 E-value=0.0012 Score=63.97 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=78.6
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccChH---
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQE--- 336 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq~--- 336 (447)
.+++++.+|+... ...+.+.+.+..+.+. +..+++.-. +.....-..+.+ ..++|+.+.+++|+.
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~-------~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGD-------GPLRDELEALIAELGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEEC-------CccHHHHHHHHHHcCCCCeEEECCcCChHHHH
Confidence 3456677787653 3445555555555543 334444321 111000001111 135789999999865
Q ss_pred HHhcccccceeeec----------cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHH
Q 037999 337 EVLAHQAIGGFLTH----------SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVR 406 (447)
Q Consensus 337 ~lL~~~~~~~~ith----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~ 406 (447)
.++.++++ ++.. |.-++++||+++|+|+|+.+..+ ....+ +....|..+. .-+.+++.++|.
T Consensus 251 ~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~ 322 (355)
T cd03799 251 ELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVP-PGDPEALADAIE 322 (355)
T ss_pred HHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeC-CCCHHHHHHHHH
Confidence 46777887 5552 22478999999999999876532 22233 3324777773 347999999999
Q ss_pred HHHhH
Q 037999 407 DLMDN 411 (447)
Q Consensus 407 ~~l~~ 411 (447)
+++.+
T Consensus 323 ~~~~~ 327 (355)
T cd03799 323 RLLDD 327 (355)
T ss_pred HHHhC
Confidence 99985
No 74
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.17 E-value=0.0018 Score=61.99 Aligned_cols=127 Identities=13% Similarity=0.118 Sum_probs=75.0
Q ss_pred CCeEEEEEeccccc----CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEe-cccChHHH
Q 037999 264 SRSVLYVSFGSFIK----LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIV-SWAPQEEV 338 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~l 338 (447)
+.+.|++-+-+..+ .....+.++++.|++.+..++..-+.. .+..+-++ . ++.+. +-+.-.++
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~------~~~~~~~~----~--~~~i~~~~vd~~~L 245 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE------DQRELFEK----Y--GVIIPPEPVDGLDL 245 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc------chhhHHhc----c--CccccCCCCCHHHH
Confidence 45667777766331 233556778999988877644443321 00011111 1 23333 45555689
Q ss_pred hcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 339 LAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 339 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
|.++++ ||+=|| ....||...|+|.|.+ +-++-...-+.+.++ |. .. ..-+.+++.+.+++.+.
T Consensus 246 l~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~-~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 246 LYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LY-HSTDPDEIVEYVRKNLG 309 (335)
T ss_pred HHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eE-ecCCHHHHHHHHHHhhh
Confidence 999999 999777 7889999999999974 112211222345453 65 22 44567777776655444
No 75
>PLN00142 sucrose synthase
Probab=98.16 E-value=0.0078 Score=63.86 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=48.3
Q ss_pred CCCeeEec----ccChHHHhcc-c-ccceeeec---cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 324 KERGCIVS----WAPQEEVLAH-Q-AIGGFLTH---SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 324 ~~~~~~~~----~~pq~~lL~~-~-~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
.+++...+ ..+..++... + +.++||.- =|. .++.||+++|+|+|+-...+ ....+.+ -..|..++
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~LV~ 715 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFHID 715 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeC
Confidence 35666554 3334455431 1 12337754 343 48999999999999865433 3334433 24687774
Q ss_pred CCCCHHHHHHHHHHHH
Q 037999 394 DTCDRSTIENLVRDLM 409 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l 409 (447)
.-+.++++++|.+++
T Consensus 716 -P~D~eaLA~aI~~lL 730 (815)
T PLN00142 716 -PYHGDEAANKIADFF 730 (815)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 346888888887655
No 76
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.14 E-value=0.0063 Score=58.61 Aligned_cols=78 Identities=17% Similarity=0.294 Sum_probs=54.2
Q ss_pred CCCeeEecccCh-HHHhcccccceeeeccCh----hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHSGW----NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 324 ~~~~~~~~~~pq-~~lL~~~~~~~~ithgG~----~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
.+++.+.+...+ ..++..+++ +|....+ +++.||+++|+|+|+... ..+...+.+ .|..+ ..-+.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~-~~~~~ 319 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLV-PPGDP 319 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEe-CCCCH
Confidence 356666665544 468888888 7765443 799999999999998544 333344422 44444 33468
Q ss_pred HHHHHHHHHHHhH
Q 037999 399 STIENLVRDLMDN 411 (447)
Q Consensus 399 ~~l~~ai~~~l~~ 411 (447)
+++.++|.+++++
T Consensus 320 ~~l~~~i~~l~~~ 332 (365)
T cd03807 320 EALAEAIEALLAD 332 (365)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
No 77
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.11 E-value=2.8e-05 Score=63.27 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=76.1
Q ss_pred eEEEEEecccccCCH-H--HHHHHHHHHHhCC-CcEEEEEecCCCCCCCCCCCCChhhhh-hcCCCeeE--ecccCh-HH
Q 037999 266 SVLYVSFGSFIKLGR-E--QILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELEQ-GTKERGCI--VSWAPQ-EE 337 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~-~--~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~pq-~~ 337 (447)
..+||+-||...... . .-.+..+.|.+.| .+.+..++.+.. ..++.... +..+...+ .+|-|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-------~~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-------FFGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-------CCCCHHHhhcccCCeEEEEEecCccHHH
Confidence 469999999873111 1 1234667777777 477888865421 11221111 11222333 367776 56
Q ss_pred HhcccccceeeeccChhhHHHHHHhCCceeecCc----cchhhHHHHHHHhhcceee
Q 037999 338 VLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQ----IGDQQVNSRCVSEIWKIGL 390 (447)
Q Consensus 338 lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~ 390 (447)
....+++ +|+|+|+||++|.|..|+|.|+++- -.+|-.-|..++++ |.=.
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~ 130 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLY 130 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEE
Confidence 6777888 9999999999999999999999987 34788889888764 6443
No 78
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.07 E-value=0.0058 Score=59.40 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=49.5
Q ss_pred cCCCeeEecccChHH---HhcccccceeeeccCh-----hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHSGW-----NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~ithgG~-----~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
..+++.+.+++++.+ ++..+++ ++.+.-. +++.||+++|+|+|+....+. ...+ +. .|..+.
T Consensus 246 ~~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~-~~--~g~~~~- 315 (363)
T cd04955 246 ADPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVL-GD--KAIYFK- 315 (363)
T ss_pred CCCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceee-cC--CeeEec-
Confidence 457899999999864 5666666 5554332 579999999999998754321 1112 21 233332
Q ss_pred CCCHHHHHHHHHHHHhH
Q 037999 395 TCDRSTIENLVRDLMDN 411 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~ 411 (447)
. .+.+.++|.+++++
T Consensus 316 ~--~~~l~~~i~~l~~~ 330 (363)
T cd04955 316 V--GDDLASLLEELEAD 330 (363)
T ss_pred C--chHHHHHHHHHHhC
Confidence 1 12299999999885
No 79
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.04 E-value=0.0013 Score=63.77 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=77.4
Q ss_pred EEEEEeccccc-CCHHHHHHHHHHHHhCC--CcEEEEEecCCCCCCCCCCCCChhhh-----hhcCCCeeEecccChH--
Q 037999 267 VLYVSFGSFIK-LGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGVGPVPVELE-----QGTKERGCIVSWAPQE-- 336 (447)
Q Consensus 267 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pq~-- 336 (447)
.+++..|+... ...+.+.+.+..+...+ ..+++.-... ....... ....+++.+.+++|+.
T Consensus 196 ~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~---------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 266 (365)
T cd03809 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRG---------WLNEELLARLRELGLGDRVRFLGYVSDEEL 266 (365)
T ss_pred CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCc---------cccHHHHHHHHHcCCCCeEEECCCCChhHH
Confidence 45567777763 34455555555554433 4444432111 0011110 1245788889999876
Q ss_pred -HHhcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 337 -EVLAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 337 -~lL~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
.++..+++ +|.. +.-+++.||+++|+|+|+-...+ ....+ . ..|..+. .-+.+++.++|.+++.|
T Consensus 267 ~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~-~~~~~~~~~~i~~l~~~ 336 (365)
T cd03809 267 AALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFD-PLDPEALAAAIERLLED 336 (365)
T ss_pred HHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeC-CCCHHHHHHHHHHHhcC
Confidence 46777777 4432 22458999999999999855421 11112 2 2343442 34789999999999886
Q ss_pred hHHHHHHHHHH
Q 037999 412 KRDKIMESTVQ 422 (447)
Q Consensus 412 ~~~~~~~~a~~ 422 (447)
+..+.+..+
T Consensus 337 --~~~~~~~~~ 345 (365)
T cd03809 337 --PALREELRE 345 (365)
T ss_pred --HHHHHHHHH
Confidence 555544443
No 80
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.02 E-value=0.031 Score=59.40 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=51.2
Q ss_pred CCCeeEeccc-Ch---HHHhcc-cc-cceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 324 KERGCIVSWA-PQ---EEVLAH-QA-IGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 324 ~~~~~~~~~~-pq---~~lL~~-~~-~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
.+++...++. +. ..++.+ ++ .++||.-. | -.+++||+++|+|+|+--..+ ....+.+ -..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~d-g~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQD-GVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeC
Confidence 4677777764 32 234543 21 23377532 2 259999999999999865433 3344544 25687774
Q ss_pred CCCCHHHHHHHHHHHH
Q 037999 394 DTCDRSTIENLVRDLM 409 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l 409 (447)
.-+.++++++|.+++
T Consensus 693 -p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -PYHGEEAAEKIVDFF 707 (784)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 457899999999876
No 81
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.99 E-value=0.002 Score=61.90 Aligned_cols=128 Identities=11% Similarity=0.003 Sum_probs=75.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhh--cCCCeeEecccChHH---Hhccc
Q 037999 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQG--TKERGCIVSWAPQEE---VLAHQ 342 (447)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~~---lL~~~ 342 (447)
+.+..|.... .+....+++++.+.+.++++.-.... ...+.....+. ..+++.+.+++++.+ ++..+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~------~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSD------PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCC------HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 3455566642 22244566677777777665432110 00000111111 257899999999854 67777
Q ss_pred ccceeee--ccCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 343 AIGGFLT--HSGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 343 ~~~~~it--hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
++-.+-+ +-|. .++.||+++|+|+|+....+ +...+ +.-..|..++. .+++.+++.+++..
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i-~~~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVV-EDGVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhhe-eCCCcEEEeCC---HHHHHHHHHHHhcc
Confidence 7733323 2343 58999999999999876532 22333 33236777643 89999999988663
No 82
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.97 E-value=0.0025 Score=60.96 Aligned_cols=129 Identities=13% Similarity=0.176 Sum_probs=72.1
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccCh-HHH
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQ-EEV 338 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq-~~l 338 (447)
+..+++..|+... ...+.+.+.++.+... +.++++. +.. .....-....+ ...+++.+.++.+. ..+
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDG------PLREELEALAKELGLADRVHFLGFQSNPYPY 260 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCC------ccHHHHHHHHHhcCCCccEEEecccCCHHHH
Confidence 4467777788763 2334444455555443 3444443 211 10000001111 13467888888776 468
Q ss_pred hcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHH
Q 037999 339 LAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDL 408 (447)
Q Consensus 339 L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~ 408 (447)
+..+++ +|.- |.-+++.||+++|+|+|+.... .....+.+ .+.|... ..-+.+.+.+.++.+
T Consensus 261 ~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~-~~~~~~~~~~~~~~i 326 (353)
T cd03811 261 LKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLV-PVGDEAALAAAALAL 326 (353)
T ss_pred HHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEE-CCCCHHHHHHHHHHH
Confidence 888888 5532 2246899999999999986443 34445544 3677777 344677774444433
No 83
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.85 E-value=0.017 Score=55.91 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=79.2
Q ss_pred CeEEEEEeccccc-CCHHHHHHHHHHHHhCC--CcEEEEEecCCCCCCCCCC-CCChhh-hhhcCCCeeEecccCh-HHH
Q 037999 265 RSVLYVSFGSFIK-LGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGVG-PVPVEL-EQGTKERGCIVSWAPQ-EEV 338 (447)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~pq-~~l 338 (447)
...+++..|+... ...+.+.+.+..+.+.. .+++++ +. |... .+-... .....+++...++..+ ..+
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~------g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 263 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GD------GELEEEIKKKVKELGLEDKVIFLGVRNDVPEL 263 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eC------CchHHHHHHHHHhcCCCCcEEEecccCCHHHH
Confidence 3456677777653 34455555555554433 344443 21 1100 000000 0123467888887555 468
Q ss_pred hcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHhHH
Q 037999 339 LAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRD 414 (447)
Q Consensus 339 L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~~~ 414 (447)
+..+++ +|.- |--++++||+++|+|+|+-...+- ...+ +. +.|.... .-+.++++++|.+++++ +
T Consensus 264 ~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i-~~-~~~~~~~-~~~~~~~a~~i~~l~~~--~ 332 (358)
T cd03812 264 LQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDL-TD-LVKFLSL-DESPEIWAEEILKLKSE--D 332 (358)
T ss_pred HHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhh-cc-CccEEeC-CCCHHHHHHHHHHHHhC--c
Confidence 888888 5543 335799999999999998655432 2233 33 4555442 33579999999999986 4
Q ss_pred HHHH
Q 037999 415 KIME 418 (447)
Q Consensus 415 ~~~~ 418 (447)
..++
T Consensus 333 ~~~~ 336 (358)
T cd03812 333 RRER 336 (358)
T ss_pred chhh
Confidence 4443
No 84
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.83 E-value=0.033 Score=54.00 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhccccc-----ceeeeccC
Q 037999 278 LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAI-----GGFLTHSG 352 (447)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~-----~~~ithgG 352 (447)
..++.+.++.+-+.+.|-.+.-.- . + ..+. ...++.+.+-+--+.++-..+- |-|+-+||
T Consensus 268 RHpERf~~v~~l~~~~gl~~~~rS--~-----~---~~~~-----~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GG 332 (419)
T COG1519 268 RHPERFKAVENLLKRKGLSVTRRS--Q-----G---DPPF-----SDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGG 332 (419)
T ss_pred CChhhHHHHHHHHHHcCCeEEeec--C-----C---CCCC-----CCCcEEEEecHhHHHHHHhhccEEEECCcccCCCC
Confidence 567888888888877765542211 1 1 1111 1246777776665544444333 33556888
Q ss_pred hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH--hHHHHHHHHHHHHHHHH
Q 037999 353 WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN--KRDKIMESTVQIAKMAR 428 (447)
Q Consensus 353 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~--~~~~~~~~a~~~~~~~~ 428 (447)
+| ..|++++|+|+|.-|+..-|.+-++++.+ .|.|+.+++ ++.+.+++..++.| ++..|.+++.++-+..+
T Consensus 333 HN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~~---~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 333 HN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVED---ADLLAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred CC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEECC---HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 87 68999999999999999999999999977 499999943 88889999888874 33445555554444444
No 85
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.81 E-value=0.00029 Score=68.35 Aligned_cols=141 Identities=11% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCCeEEEEEecccccCC-H---HHHHHHHHHHHhC-CCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccCh--
Q 037999 263 PSRSVLYVSFGSFIKLG-R---EQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQ-- 335 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~-~---~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq-- 335 (447)
.+++.++|++=...+.. + .++.++++++.+. +.++||.+..... +.. .+ ....++. +|+++++-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~---~~~-~i-~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR---GSD-II-IEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH---HHH-HH-HHHHTT--TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch---HHH-HH-HHHhccc-CCEEEECCCCHHH
Confidence 56788999985555444 3 4566677777766 6788998852100 000 01 1111233 48988876665
Q ss_pred -HHHhcccccceeeeccChhhHH-HHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHhH
Q 037999 336 -EEVLAHQAIGGFLTHSGWNSTL-ESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKR 413 (447)
Q Consensus 336 -~~lL~~~~~~~~ithgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~~ 413 (447)
..+|.++.+ +||-.| +++ ||.+.|+|.|.+ -|+...-.-+ . .|..+.+ + .+.++|.+++.+++.+
T Consensus 252 ~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv-~-~~~~~I~~ai~~~l~~-- 318 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR-E-RGSNVLV-G-TDPEAIIQAIEKALSD-- 318 (346)
T ss_dssp HHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH-H-TTSEEEE-T-SSHHHHHHHHHHHHH---
T ss_pred HHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH-h-hcceEEe-C-CCHHHHHHHHHHHHhC--
Confidence 468889888 999999 666 999999999999 3333332222 2 2555555 3 7899999999999985
Q ss_pred HHHHHHHHH
Q 037999 414 DKIMESTVQ 422 (447)
Q Consensus 414 ~~~~~~a~~ 422 (447)
....++.+.
T Consensus 319 ~~~~~~~~~ 327 (346)
T PF02350_consen 319 KDFYRKLKN 327 (346)
T ss_dssp HHHHHHHHC
T ss_pred hHHHHhhcc
Confidence 444444443
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=97.78 E-value=0.045 Score=53.78 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=52.1
Q ss_pred CCeeEe-cccChHH---Hhcccccceeee----c--cC-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 325 ERGCIV-SWAPQEE---VLAHQAIGGFLT----H--SG-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 325 ~~~~~~-~~~pq~~---lL~~~~~~~~it----h--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
+|+.+. +|+|+.+ +|..+++ ||. . -| -++++||+++|+|+|+.... .+...+.+ -+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccC-CCCeEEEC
Confidence 456665 5888865 4888888 663 1 12 35799999999999987432 24445544 36788874
Q ss_pred CCCCHHHHHHHHHHHH
Q 037999 394 DTCDRSTIENLVRDLM 409 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l 409 (447)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5889999888764
No 87
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.77 E-value=0.055 Score=54.16 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=54.6
Q ss_pred cCCCeeEecccChHH---Hhcccccceeee-----ccChhhHHHHHHhCCceeecCccchhhHHHHHHHh---hcceeeE
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLT-----HSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSE---IWKIGLD 391 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~it-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~---~~g~g~~ 391 (447)
+.+++.+.+++|+.+ +|..+++ +|+ |-| .++.||+++|+|+|+.-..+.- .-+.+ .-..|..
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~----~~iv~~~~~g~~G~l 375 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL----LDIVVPWDGGPTGFL 375 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc----hheeeccCCCCceEE
Confidence 357889999998764 7778777 553 333 4889999999999986433211 11112 1246766
Q ss_pred eCCCCCHHHHHHHHHHHHhH
Q 037999 392 MKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 392 ~~~~~~~~~l~~ai~~~l~~ 411 (447)
. -+.++++++|.+++++
T Consensus 376 ~---~d~~~la~ai~~ll~~ 392 (419)
T cd03806 376 A---STAEEYAEAIEKILSL 392 (419)
T ss_pred e---CCHHHHHHHHHHHHhC
Confidence 5 2899999999999983
No 88
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.72 E-value=0.0015 Score=65.03 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=97.4
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhCC--CcEEEEEecCCCCCCCCCCCCChhhh---h--hcCCCeeEecccChHH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGVGPVPVELE---Q--GTKERGCIVSWAPQEE 337 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~pq~~ 337 (447)
+..+++.|.... ...+.+.+.+..+.+.. ..+.|++-+. |. ..+.+. + ...+++...+|+++.+
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~-----g~---~~~~l~~~~~~~~~~~~V~f~G~v~~~e 301 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGG-----GP---LEDTLKELAESKPENISVNFTGELSNSE 301 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeC-----ch---HHHHHHHHHHhcCCCceEEEecCCChHH
Confidence 456677777763 33444444444443322 4676665322 11 111111 1 1235688889999865
Q ss_pred ---HhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 338 ---VLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 338 ---lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
++..+++.+|+...- -++++||+++|+|+|+-...+ ....+ +.-+.|..+...-+.+++.++|.++++
T Consensus 302 ~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i-~~~~~G~l~~~~~~~~~la~~I~~ll~ 376 (407)
T cd04946 302 VYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIV-DNGGNGLLLSKDPTPNELVSSLSKFID 376 (407)
T ss_pred HHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHh-cCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 445444445776553 468999999999999865332 34445 332478877555578999999999998
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 411 NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 411 ~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
| +..+ +++++..++.+.+.=+.+.+.++|++
T Consensus 377 ~--~~~~---~~m~~~ar~~~~~~f~~~~~~~~~~~ 407 (407)
T cd04946 377 N--EEEY---QTMREKAREKWEENFNASKNYREFAK 407 (407)
T ss_pred C--HHHH---HHHHHHHHHHHHHHcCHHHhHHHhcC
Confidence 5 4333 34455555555556677777777753
No 89
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.61 E-value=0.13 Score=54.57 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=63.6
Q ss_pred cCCCeeEecccChH-HHhcccccceeee---ccC-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-CCC
Q 037999 323 TKERGCIVSWAPQE-EVLAHQAIGGFLT---HSG-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTC 396 (447)
Q Consensus 323 ~~~~~~~~~~~pq~-~lL~~~~~~~~it---hgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~ 396 (447)
+.+++.+.+|.++. .++..+++ ||. +-| -++++||+++|+|+|+....+ ....+.+ -..|..+. +..
T Consensus 572 L~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~d-g~~GlLv~~~d~ 644 (694)
T PRK15179 572 MGERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQE-GVTGLTLPADTV 644 (694)
T ss_pred CCCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccC-CCCEEEeCCCCC
Confidence 34788888998763 57888888 664 445 379999999999999976532 3334533 24688876 566
Q ss_pred CHHHHHHHHHHHHhH--hHHHHHHHHHHHH
Q 037999 397 DRSTIENLVRDLMDN--KRDKIMESTVQIA 424 (447)
Q Consensus 397 ~~~~l~~ai~~~l~~--~~~~~~~~a~~~~ 424 (447)
+.+++.+++.+++.+ ..+.+++++++..
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 677777777776641 1156666655443
No 90
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.52 E-value=0.049 Score=55.79 Aligned_cols=194 Identities=12% Similarity=0.115 Sum_probs=98.4
Q ss_pred ccccchHHHHHHhhccCeeEEec-cccccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEeccccc
Q 037999 199 FNEIEGPIISKLGSRLTKIYTVG-PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIK 277 (447)
Q Consensus 199 ~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~ 277 (447)
...||.+++ +..--++.+|| |+....+. .+ ..++..+-+...+++++|-+-.||-..
T Consensus 368 IfPFE~~~y---~~~gv~v~yVGHPL~d~i~~---------~~----------~~~~~r~~lgl~~~~~iIaLLPGSR~~ 425 (608)
T PRK01021 368 ILPFEQNLF---KDSPLRTVYLGHPLVETISS---------FS----------PNLSWKEQLHLPSDKPIVAAFPGSRRG 425 (608)
T ss_pred cCccCHHHH---HhcCCCeEEECCcHHhhccc---------CC----------CHHHHHHHcCCCCCCCEEEEECCCCHH
Confidence 345677665 44556799999 66543210 00 111122233333456889999999874
Q ss_pred CCHHHHHHHHHHHH--hC--CCcEEEEEecCCCCCCCCCCCCChhhhhhcCC----CeeEecccChHHHhcccccceeee
Q 037999 278 LGREQILEFWHGMV--NS--GKRFLWVIRSDLIDGEPGVGPVPVELEQGTKE----RGCIVSWAPQEEVLAHQAIGGFLT 349 (447)
Q Consensus 278 ~~~~~~~~~~~~l~--~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pq~~lL~~~~~~~~it 349 (447)
.=...+-.++++.+ .. ..+|+...-.+ ...+.+.+...+ ++.++.--...+++..+++ .+.
T Consensus 426 EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLa 494 (608)
T PRK01021 426 DILRNLTIQVQAFLASSLASTHQLLVSSANP---------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALA 494 (608)
T ss_pred HHHHHHHHHHHHHHHHHhccCeEEEEecCch---------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eee
Confidence 32333444555544 32 34554432111 001111111111 1233311012578888888 777
Q ss_pred ccChhhHHHHHHhCCceeecCccc-hhhHHHHHHHhh----cc-----eeeEeC-------CCCCHHHHHHHHHHHHhH-
Q 037999 350 HSGWNSTLESLVAGVPMICWPQIG-DQQVNSRCVSEI----WK-----IGLDMK-------DTCDRSTIENLVRDLMDN- 411 (447)
Q Consensus 350 hgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~----~g-----~g~~~~-------~~~~~~~l~~ai~~~l~~- 411 (447)
-+| ..++|+...|+||+++=-.. =-+.-++++.+. .+ +|..+- +..++++|.+++ ++|.|
T Consensus 495 aSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 495 KCG-TIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred cCC-HHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCH
Confidence 777 46789999999999862211 223345555440 01 122211 257899999997 77765
Q ss_pred -hHHHHHHHHHHHHHHH
Q 037999 412 -KRDKIMESTVQIAKMA 427 (447)
Q Consensus 412 -~~~~~~~~a~~~~~~~ 427 (447)
..+++++..+++.+.+
T Consensus 573 ~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 573 QSKEKQKDACRDLYQAM 589 (608)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 1234444444444443
No 91
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.52 E-value=0.016 Score=56.45 Aligned_cols=206 Identities=17% Similarity=0.199 Sum_probs=113.6
Q ss_pred ccccchHHHHHHhhccCeeEEec-cccccccccccccccCCCCCCCCCCCCccccccccccccCCCCCeEEEEEeccccc
Q 037999 199 FNEIEGPIISKLGSRLTKIYTVG-PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSRSVLYVSFGSFIK 277 (447)
Q Consensus 199 ~~~le~~~l~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~ 277 (447)
...||.+++ +..--++.+|| |+...... .+ ......+.+ ...++++|-+--||-..
T Consensus 140 ifPFE~~~y---~~~g~~~~~VGHPl~d~~~~---------~~----------~~~~~~~~~-l~~~~~iIaLLPGSR~~ 196 (373)
T PF02684_consen 140 IFPFEPEFY---KKHGVPVTYVGHPLLDEVKP---------EP----------DRAEAREKL-LDPDKPIIALLPGSRKS 196 (373)
T ss_pred CCcccHHHH---hccCCCeEEECCcchhhhcc---------CC----------CHHHHHHhc-CCCCCcEEEEeCCCCHH
Confidence 445676655 44445799999 66643221 00 111112222 23467899999999864
Q ss_pred CCHHHHHHHHHH---HHhC--CCcEEEEEecCCCCCCCCCCCCCh---hhhhhcCCCeeEe-cccChHHHhcccccceee
Q 037999 278 LGREQILEFWHG---MVNS--GKRFLWVIRSDLIDGEPGVGPVPV---ELEQGTKERGCIV-SWAPQEEVLAHQAIGGFL 348 (447)
Q Consensus 278 ~~~~~~~~~~~~---l~~~--~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~i 348 (447)
-=...+-.++++ +.+. +.+|++..-.. .... ........++.+. ..-.-.+++..+++ .+
T Consensus 197 EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al 265 (373)
T PF02684_consen 197 EIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--AL 265 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hh
Confidence 222222233333 3332 34555543211 0111 0111122333333 22234568888877 55
Q ss_pred eccChhhHHHHHHhCCceeecCcc-chhhHHHHHHHhhcce-e-------eEe-----CCCCCHHHHHHHHHHHHhHhHH
Q 037999 349 THSGWNSTLESLVAGVPMICWPQI-GDQQVNSRCVSEIWKI-G-------LDM-----KDTCDRSTIENLVRDLMDNKRD 414 (447)
Q Consensus 349 thgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~~~~~~g~-g-------~~~-----~~~~~~~~l~~ai~~~l~~~~~ 414 (447)
.=+| ..|+|+...|+|||++=-. .=-+.-++++.+. .. | ..+ .+..+++.|.+++.+++.| +
T Consensus 266 ~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~-~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~--~ 341 (373)
T PF02684_consen 266 AASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKV-KYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN--P 341 (373)
T ss_pred hcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcC-CEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC--H
Confidence 5555 5788999999999987332 2234456666442 21 1 111 1368999999999999997 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 037999 415 KIMESTVQIAKMARDAVKEGGSSYRNLD 442 (447)
Q Consensus 415 ~~~~~a~~~~~~~~~~~~~~gs~~~~~~ 442 (447)
..++..+...+.+++....|.++.....
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (373)
T PF02684_consen 342 EKRKKQKELFREIRQLLGPGASSRAAQA 369 (373)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCHHHHH
Confidence 5577777777777777776777665543
No 92
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=97.50 E-value=0.015 Score=59.14 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=74.0
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhh---hhhcCCCeeEecccChH---HH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVEL---EQGTKERGCIVSWAPQE---EV 338 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pq~---~l 338 (447)
..+++..|.... ...+.+.+.+..+.+.+.+++++-. |.. .+.+.+ .++.++|+.+..-.++. .+
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~-------g~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 367 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGS-------GDP-EYEEALRELAARYPGRVAVLIGYDEALAHLI 367 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEec-------CCH-HHHHHHHHHHHhCCCcEEEEEeCCHHHHHHH
Confidence 345667777763 3445555555555444556655432 110 111111 12235677765333443 36
Q ss_pred hcccccceeeec-----cChhhHHHHHHhCCceeecCccc--hhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 339 LAHQAIGGFLTH-----SGWNSTLESLVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 339 L~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+..+++ |+.. || .+.+||+++|+|+|+....+ |.-.+...-.+ -|.|..+. .-+.+++.++|.+++.
T Consensus 368 ~~~aDv--~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~-~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 368 YAGADF--FLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFE-GYNADALLAALRRALA 441 (476)
T ss_pred HHhCCE--EECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeC-CCCHHHHHHHHHHHHH
Confidence 777777 6643 33 47899999999999865532 22211111112 25788874 4568999999999886
No 93
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.44 E-value=0.0032 Score=62.60 Aligned_cols=141 Identities=21% Similarity=0.281 Sum_probs=76.1
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccChHHHh-
Q 037999 263 PSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQEEVL- 339 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq~~lL- 339 (447)
++..++|.||.+..+.+++.+..-++-|++.+...+|..+.+... . ..+-..+.+ -.++++.+.++.|+.+-|
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~---~-~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~ 357 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG---E-ARLRRRFAAHGVDPDRIIFSPVAPREEHLR 357 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH---H-HHHHHHHHHTTS-GGGEEEEE---HHHHHH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH---H-HHHHHHHHHcCCChhhEEEcCCCCHHHHHH
Confidence 455799999999999999999988888999999999998643111 0 001111111 123677778888876544
Q ss_pred --cccccceee---eccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 340 --AHQAIGGFL---THSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 340 --~~~~~~~~i---thgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
...++ ++ ..+|.+|++|||+.|||+|.+|--.=.-..+.-+-..+|+.-.+..+ ..+-+..|++ +-.|
T Consensus 358 ~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s-~~eYv~~Av~-La~D 430 (468)
T PF13844_consen 358 RYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADS-EEEYVEIAVR-LATD 430 (468)
T ss_dssp HGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SS-HHHHHHHHHH-HHH-
T ss_pred HhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCC-HHHHHHHHHH-HhCC
Confidence 33444 54 35688999999999999999996433333443333446887666432 2445555554 4444
No 94
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=0.0014 Score=52.59 Aligned_cols=105 Identities=16% Similarity=0.205 Sum_probs=66.6
Q ss_pred EEEEecccccCCHHH-H--HHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCe-eEeccc--Ch-HHHhc
Q 037999 268 LYVSFGSFIKLGREQ-I--LEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERG-CIVSWA--PQ-EEVLA 340 (447)
Q Consensus 268 v~vs~Gs~~~~~~~~-~--~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--pq-~~lL~ 340 (447)
++|+-||... +-.. + .++..-.+.-..++|..++.. ...| -|+ ++.+|. +- +.+..
T Consensus 2 ifVTvGstf~-~f~rlv~k~e~~el~~~i~e~lIvQyGn~--------d~kp--------vagl~v~~F~~~~kiQsli~ 64 (161)
T COG5017 2 IFVTVGSTFY-PFNRLVLKIEVLELTELIQEELIVQYGNG--------DIKP--------VAGLRVYGFDKEEKIQSLIH 64 (161)
T ss_pred eEEEecCccc-hHHHHHhhHHHHHHHHHhhhheeeeecCC--------Cccc--------ccccEEEeechHHHHHHHhh
Confidence 7899999852 2111 1 111111122235788888532 1223 133 555554 33 45667
Q ss_pred ccccceeeeccChhhHHHHHHhCCceeecCccc--------hhhHHHHHHHhhcceeeEe
Q 037999 341 HQAIGGFLTHSGWNSTLESLVAGVPMICWPQIG--------DQQVNSRCVSEIWKIGLDM 392 (447)
Q Consensus 341 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--------DQ~~na~~~~~~~g~g~~~ 392 (447)
.+++ +|+|||.||+..++..++|.|++|--. +|..-|..+++ .+.=+..
T Consensus 65 darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~ 121 (161)
T COG5017 65 DARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVAC 121 (161)
T ss_pred cceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEE
Confidence 7777 999999999999999999999999854 47777877766 4655544
No 95
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.41 E-value=0.012 Score=58.14 Aligned_cols=82 Identities=16% Similarity=0.259 Sum_probs=58.9
Q ss_pred cCCCeeEecccChHH---Hhcccccceeeecc----Ch-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS----GW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~ithg----G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
.+.++.+.+++|+.+ ++..+++ ||... |. .+++||+++|+|+|+....+ +...+.+ -..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEeC
Confidence 456788889998654 5888888 66533 32 57899999999999976532 3334433 256765544
Q ss_pred CCCHHHHHHHHHHHHhH
Q 037999 395 TCDRSTIENLVRDLMDN 411 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~ 411 (447)
..+.+++.++|.++++|
T Consensus 328 ~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 328 PMTSDSIISDINRTLAD 344 (380)
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 56799999999999986
No 96
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.39 E-value=0.0057 Score=52.70 Aligned_cols=134 Identities=16% Similarity=0.251 Sum_probs=82.3
Q ss_pred CCeEEEEEeccccc-CCHHHHHHHHHHHHh--CCCcEEEEEecCCCCCCCCCCCCChhhh--hhcCCCeeEecccCh---
Q 037999 264 SRSVLYVSFGSFIK-LGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELE--QGTKERGCIVSWAPQ--- 335 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pq--- 335 (447)
.++.+++..|.... ...+.+.+++.-+.. .+.-.++.++.. .....-.... ....+++.+.++.++
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 86 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDG------EYKKELKNLIEKLNLKENIIFLGYVPDDEL 86 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHC------CHHHHHHHHHHHTTCGTTEEEEESHSHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccc------cccccccccccccccccccccccccccccc
Confidence 44567777888764 345555554444432 233344445311 0000000111 124578999999983
Q ss_pred HHHhcccccceeeec----cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 336 EEVLAHQAIGGFLTH----SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 336 ~~lL~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
..++..+++ +|+. +.-+++.||+++|+|+|+. |...+...+.+ .+.|..+... +.+++.++|.+++.+
T Consensus 87 ~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~~-~~~~l~~~i~~~l~~ 158 (172)
T PF00534_consen 87 DELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDPN-DIEELADAIEKLLND 158 (172)
T ss_dssp HHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEESTT-SHHHHHHHHHHHHHH
T ss_pred cccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCCC-CHHHHHHHHHHHHCC
Confidence 357888888 7766 4567999999999999975 34455555644 3678888533 899999999999996
No 97
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.36 E-value=0.0074 Score=60.12 Aligned_cols=81 Identities=17% Similarity=0.293 Sum_probs=58.8
Q ss_pred cCCCeeEecccChHH---Hhcccccceeeec---------cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhccee
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTH---------SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~ith---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g 389 (447)
+.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+.+ -..|
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G 349 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSG 349 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCce
Confidence 346888999999864 6778887 6643 244 67899999999999875432 2233433 2467
Q ss_pred eEeCCCCCHHHHHHHHHHHHh-H
Q 037999 390 LDMKDTCDRSTIENLVRDLMD-N 411 (447)
Q Consensus 390 ~~~~~~~~~~~l~~ai~~~l~-~ 411 (447)
..++ .-+.+++.++|.+++. |
T Consensus 350 ~lv~-~~d~~~la~ai~~l~~~d 371 (406)
T PRK15427 350 WLVP-ENDAQALAQRLAAFSQLD 371 (406)
T ss_pred EEeC-CCCHHHHHHHHHHHHhCC
Confidence 7763 4579999999999998 6
No 98
>PLN02949 transferase, transferring glycosyl groups
Probab=97.32 E-value=0.088 Score=53.27 Aligned_cols=94 Identities=14% Similarity=0.098 Sum_probs=58.2
Q ss_pred cCCCeeEecccChHH---Hhcccccceeee---ccCh-hhHHHHHHhCCceeecCccchhhHHHHHHHh-hcc-eeeEeC
Q 037999 323 TKERGCIVSWAPQEE---VLAHQAIGGFLT---HSGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSE-IWK-IGLDMK 393 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~---lL~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~-~~g-~g~~~~ 393 (447)
+.+++.+.+++|+.+ +|..+++ +|+ +=|. .++.||+++|+|+|+....+--. ..+.+ .-| .|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~- 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA- 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC-
Confidence 457899999998764 6777777 663 1233 37999999999999986543100 00101 001 34333
Q ss_pred CCCCHHHHHHHHHHHHh-H--hHHHHHHHHHHHH
Q 037999 394 DTCDRSTIENLVRDLMD-N--KRDKIMESTVQIA 424 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l~-~--~~~~~~~~a~~~~ 424 (447)
-+.++++++|.+++. + ...++++++++..
T Consensus 407 --~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 407 --TTVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred --CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 278999999999997 3 1234555555443
No 99
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.30 E-value=0.061 Score=52.71 Aligned_cols=129 Identities=17% Similarity=0.155 Sum_probs=78.9
Q ss_pred CeEEEEEecccc--c-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhc--CCCeeEecccCh---H
Q 037999 265 RSVLYVSFGSFI--K-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGT--KERGCIVSWAPQ---E 336 (447)
Q Consensus 265 ~~vv~vs~Gs~~--~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq---~ 336 (447)
++.++|++=... . .+.+.+..+++++.+.+.++++.+..... +.. .+-+.+.+.. .+|+.+.+-++. .
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p---~~~-~i~~~i~~~~~~~~~v~l~~~l~~~~~l 276 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA---GSR-IINEAIEEYVNEHPNFRLFKSLGQERYL 276 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC---Cch-HHHHHHHHHhcCCCCEEEECCCChHHHH
Confidence 467778875443 3 34577999999998877666665532100 000 0111111111 367888876655 4
Q ss_pred HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeE-eCCCCCHHHHHHHHHHHHh
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD-MKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~~~~l~~ai~~~l~ 410 (447)
.++.++++ +||-++.+- .||.+.|+|.|.+- +-+ ...+ .|..+. + ..++++|.+++.++++
T Consensus 277 ~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~-~g~nvl~v--g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 277 SLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRL-RADSVIDV--DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc----hhhh-hcCeEEEe--CCCHHHHHHHHHHHhC
Confidence 58889888 999885544 99999999999773 211 1112 243333 3 4578999999998554
No 100
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.24 E-value=0.0039 Score=60.18 Aligned_cols=156 Identities=13% Similarity=0.070 Sum_probs=91.5
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCc-EEEEEecCCCCCCCCCCCCChhhhhhcC--CCeeEecccChHHHhccc
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNSGKR-FLWVIRSDLIDGEPGVGPVPVELEQGTK--ERGCIVSWAPQEEVLAHQ 342 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pq~~lL~~~ 342 (447)
++|.+--||....-...+-.+.++..+...+ ..+.+... . .. +.+.+... ....+.+ .-.+++..+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a-------~-~~-~~i~~~~~~~~~~~~~~--~~~~~m~~a 236 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSF-------F-KG-KDLKEIYGDISEFEISY--DTHKALLEA 236 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCC-------C-cH-HHHHHHHhcCCCcEEec--cHHHHHHhh
Confidence 6899999998753334444344444333211 23333211 0 01 11111111 1222332 335788998
Q ss_pred ccceeeeccChhhHHHHHHhCCceeecCc--cchhhHHHHHHHh--hcceeeEe--------------CCCCCHHHHHHH
Q 037999 343 AIGGFLTHSGWNSTLESLVAGVPMICWPQ--IGDQQVNSRCVSE--IWKIGLDM--------------KDTCDRSTIENL 404 (447)
Q Consensus 343 ~~~~~ithgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~--~~g~g~~~--------------~~~~~~~~l~~a 404 (447)
++ .|+-+|..|+ |+..+|+|||+ ++ -.-|+.||+++.+ ..|+...+ .+..+++.|.++
T Consensus 237 Dl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~ 312 (347)
T PRK14089 237 EF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKA 312 (347)
T ss_pred hH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHH
Confidence 88 9999999999 99999999999 55 3468889999862 23544333 146889999998
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 037999 405 VRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKL 444 (447)
Q Consensus 405 i~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 444 (447)
+.+ ... +++++...++.+.+ . +|++.+..+.+
T Consensus 313 i~~-~~~--~~~~~~~~~l~~~l----~-~~a~~~~A~~i 344 (347)
T PRK14089 313 YKE-MDR--EKFFKKSKELREYL----K-HGSAKNVAKIL 344 (347)
T ss_pred HHH-HHH--HHHHHHHHHHHHHh----c-CCHHHHHHHHH
Confidence 877 222 45666666665555 2 35555554433
No 101
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.23 E-value=0.0018 Score=63.03 Aligned_cols=126 Identities=16% Similarity=0.206 Sum_probs=80.5
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChH---HHhccccc
Q 037999 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQE---EVLAHQAI 344 (447)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~ 344 (447)
.++..|+... .+....+++++.+.+.+++++-+.+ ..+.+.+...+|+.+.+++|+. .++..+++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~----------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP----------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh----------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 3455676652 2335556777777777766553211 1122223456899999999985 47888887
Q ss_pred ceeeeccCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 345 GGFLTHSGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 345 ~~~ithgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
-.+-+.-|. .++.||+++|+|+|+....+ ....+.+ -+.|..++ .-+.++++++|.+++.+
T Consensus 265 ~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~-~~~~~~la~~i~~l~~~ 326 (351)
T cd03804 265 FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFE-EQTVESLAAAVERFEKN 326 (351)
T ss_pred EEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeC-CCCHHHHHHHHHHHHhC
Confidence 222233343 46789999999999976533 2223433 25787774 34788999999999986
No 102
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.20 E-value=0.0054 Score=55.80 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=99.0
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhh--cCCCeeEecccCh-HHHhcccc
Q 037999 267 VLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQG--TKERGCIVSWAPQ-EEVLAHQA 343 (447)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq-~~lL~~~~ 343 (447)
-|+|++|..- +....-+++..|.+.++.+-.+++... .-.+++.++ ..+|+........ ..++..++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~--------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN--------PTLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC--------cchhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 3889888654 344566677777777766666664221 112222222 3367777766554 46889988
Q ss_pred cceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 037999 344 IGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDKIMESTVQI 423 (447)
Q Consensus 344 ~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~ 423 (447)
. .|+-+|. |+.|++..|+|.+++|+...|-..|+..+. +|+-..+.-.++.+.+..-+.+++.| ...|++.-..
T Consensus 230 ~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~l~~~~~~~~~~~i~~d--~~~rk~l~~~ 303 (318)
T COG3980 230 L--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYHLKDLAKDYEILQIQKD--YARRKNLSFG 303 (318)
T ss_pred h--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCCCchHHHHHHHHHhhhC--HHHhhhhhhc
Confidence 8 8998874 999999999999999999999999999855 68877775237777777778888887 5555554433
No 103
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.06 E-value=0.39 Score=48.27 Aligned_cols=72 Identities=14% Similarity=0.156 Sum_probs=50.5
Q ss_pred EecccChHHHhcccccceeeecc----ChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHH
Q 037999 329 IVSWAPQEEVLAHQAIGGFLTHS----GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENL 404 (447)
Q Consensus 329 ~~~~~pq~~lL~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~a 404 (447)
..++.+..+++...++ ||.-+ =-++++||+++|+|+|+.-..+ | ..+.+ -+.|... -+.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~---~~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTY---DDGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEec---CCHHHHHHH
Confidence 3466666778888887 88764 2478999999999999975432 2 22322 2444444 368899999
Q ss_pred HHHHHhH
Q 037999 405 VRDLMDN 411 (447)
Q Consensus 405 i~~~l~~ 411 (447)
+.++|.+
T Consensus 357 i~~~l~~ 363 (462)
T PLN02846 357 TLKALAE 363 (462)
T ss_pred HHHHHcc
Confidence 9999874
No 104
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.96 E-value=0.44 Score=46.81 Aligned_cols=77 Identities=16% Similarity=0.064 Sum_probs=51.3
Q ss_pred CCCeeEecccChHH---Hhcccccceee------eccCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC
Q 037999 324 KERGCIVSWAPQEE---VLAHQAIGGFL------THSGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (447)
Q Consensus 324 ~~~~~~~~~~pq~~---lL~~~~~~~~i------thgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 393 (447)
.+|+...+++|+.+ .+.++++..+- +.++. +.+.|++++|+|+|+.++ ...+ +..+.+...
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~- 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLI- 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEe-
Confidence 37999999999765 67788873322 12232 458999999999998763 1122 222323333
Q ss_pred CCCCHHHHHHHHHHHHh
Q 037999 394 DTCDRSTIENLVRDLMD 410 (447)
Q Consensus 394 ~~~~~~~l~~ai~~~l~ 410 (447)
. -+.+++.++|.+++.
T Consensus 324 ~-~d~~~~~~ai~~~l~ 339 (373)
T cd04950 324 A-DDPEEFVAAIEKALL 339 (373)
T ss_pred C-CCHHHHHHHHHHHHh
Confidence 2 379999999999876
No 105
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.94 E-value=0.008 Score=58.16 Aligned_cols=112 Identities=18% Similarity=0.348 Sum_probs=78.2
Q ss_pred cCCCeeEecccChHHHhcc--cccceeeec-------cCh------hhHHHHHHhCCceeecCccchhhHHHHHHHhhcc
Q 037999 323 TKERGCIVSWAPQEEVLAH--QAIGGFLTH-------SGW------NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (447)
Q Consensus 323 ~~~~~~~~~~~pq~~lL~~--~~~~~~ith-------gG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 387 (447)
..+|+...+|+|+.++..+ .+.+.+... +.+ +-+.+.+++|+|+|+++ +...+..+.+ .+
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~ 279 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NG 279 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CC
Confidence 3468999999999876432 133322221 111 23778899999999864 3455666755 58
Q ss_pred eeeEeCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 388 IGLDMKDTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 388 ~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
+|+.++ +.+++.+++.++..++..+|++|++++++++++ |---.+++.+++.
T Consensus 280 ~G~~v~---~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD---SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC---CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 999984 678899999887655567899999999999886 4556666666653
No 106
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.75 E-value=0.012 Score=48.44 Aligned_cols=126 Identities=20% Similarity=0.249 Sum_probs=67.2
Q ss_pred EEEEeccccc-CCHHHHHH-HHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccCh-HHHhccccc
Q 037999 268 LYVSFGSFIK-LGREQILE-FWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQ-EEVLAHQAI 344 (447)
Q Consensus 268 v~vs~Gs~~~-~~~~~~~~-~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq-~~lL~~~~~ 344 (447)
.++++|+... ...+.+.+ +++.+.+...++-+.+-+. -++.+.+...+|+.+.+|++. .+++..+++
T Consensus 4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~----------~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv 73 (135)
T PF13692_consen 4 YIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN----------GPDELKRLRRPNVRFHGFVEELPEILAAADV 73 (135)
T ss_dssp EEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE----------SS-HHCCHHHCTEEEE-S-HHHHHHHHC-SE
T ss_pred cccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC----------CHHHHHHhcCCCEEEcCCHHHHHHHHHhCCE
Confidence 4555666553 34454444 6666654433344443221 111222112469999999865 368889998
Q ss_pred ceeeecc--C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 345 GGFLTHS--G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 345 ~~~ithg--G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
....+.. | -+++.|++++|+|+|+.+.. ....+.. .+.|..+ .-+.+++.++|.++++|
T Consensus 74 ~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~-~~~~~~~--~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 74 GLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEE-DGCGVLV--ANDPEELAEAIERLLND 135 (135)
T ss_dssp EEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE---TT-HHHHHHHHHHHHH-
T ss_pred EEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheee-cCCeEEE--CCCHHHHHHHHHHHhcC
Confidence 6655432 2 48999999999999997651 1112222 4777766 34899999999999864
No 107
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.73 E-value=0.02 Score=55.96 Aligned_cols=130 Identities=14% Similarity=0.186 Sum_probs=75.5
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCC--CcEEEEEecCCCCCCCCC-CCCChhhhh--hcCCCeeEecccCh--HH-
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGV-GPVPVELEQ--GTKERGCIVSWAPQ--EE- 337 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~pq--~~- 337 (447)
+.+++..|.........+..+++++.... .++++ ++. |.. ..+ ....+ ..++++.+.+|.++ ..
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~------g~~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGD------GSDFEKC-KAYSRELGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeC------CccHHHH-HHHHHHcCCCCeEEEecccCCcHHHH
Confidence 34567777765322233555666665543 34433 332 110 011 11111 23578889999854 22
Q ss_pred --Hhcccccceeeec----cChhhHHHHHHhCCceeecC-ccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 338 --VLAHQAIGGFLTH----SGWNSTLESLVAGVPMICWP-QIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 338 --lL~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
.+..+++ ||.. |--+++.||+++|+|+|+.- ..+ ....+.+ -..|..+ ..-+.+++.++|.++++
T Consensus 252 ~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv-~~~d~~~la~~i~~l~~ 323 (359)
T PRK09922 252 QQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELY-TPGNIDEFVGKLNKVIS 323 (359)
T ss_pred HHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEE-CCCCHHHHHHHHHHHHh
Confidence 3445566 6643 22479999999999999875 322 1123433 2567776 44589999999999998
Q ss_pred H
Q 037999 411 N 411 (447)
Q Consensus 411 ~ 411 (447)
+
T Consensus 324 ~ 324 (359)
T PRK09922 324 G 324 (359)
T ss_pred C
Confidence 5
No 108
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.50 E-value=0.31 Score=47.00 Aligned_cols=137 Identities=16% Similarity=0.225 Sum_probs=85.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHH----HHHhC-CCcEEEEEecCCCCCCCCCCCCChhhh-hhcC--CCeeEe---cc
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWH----GMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELE-QGTK--ERGCIV---SW 332 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~----~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~---~~ 332 (447)
.+..+++++=-..+.. +.+..+.. .+++. +..++.-+-.+ . . -.++. +++. +|+.+. +|
T Consensus 203 ~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~--~------~-v~e~~~~~L~~~~~v~li~pl~~ 272 (383)
T COG0381 203 DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR--P------R-VRELVLKRLKNVERVKLIDPLGY 272 (383)
T ss_pred cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC--h------h-hhHHHHHHhCCCCcEEEeCCcch
Confidence 4467888865555443 33444444 34444 34555544221 0 0 01111 2233 357765 66
Q ss_pred cChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHh
Q 037999 333 APQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNK 412 (447)
Q Consensus 333 ~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~ 412 (447)
.+...++.++.+ ++|-.| |-.=||...|+|.+++=...+++. ++ +. |.-+.+ ..+.+.|.+++.+++++
T Consensus 273 ~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lv--g~~~~~i~~~~~~ll~~- 341 (383)
T COG0381 273 LDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILV--GTDEENILDAATELLED- 341 (383)
T ss_pred HHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEe--CccHHHHHHHHHHHhhC-
Confidence 777889999887 999887 456789999999999977778877 33 42 555555 35679999999999997
Q ss_pred HHHHHHHHHH
Q 037999 413 RDKIMESTVQ 422 (447)
Q Consensus 413 ~~~~~~~a~~ 422 (447)
++..++.+.
T Consensus 342 -~~~~~~m~~ 350 (383)
T COG0381 342 -EEFYERMSN 350 (383)
T ss_pred -hHHHHHHhc
Confidence 555554433
No 109
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=96.41 E-value=0.086 Score=50.96 Aligned_cols=125 Identities=12% Similarity=0.223 Sum_probs=74.2
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCCCCCCCCChhhh---h--hcCCCeeEecccCh-H
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELE---Q--GTKERGCIVSWAPQ-E 336 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~pq-~ 336 (447)
..+++..|+... ...+.+.+.+..+.+. +.+++++-+ |. ..+.+. + ...+|+.+.++..+ .
T Consensus 188 ~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~-------g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 257 (360)
T cd04951 188 TFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGD-------GP---LRATLERLIKALGLSNRVKLLGLRDDIA 257 (360)
T ss_pred CEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcC-------CC---cHHHHHHHHHhcCCCCcEEEecccccHH
Confidence 456777787653 2334444444444332 356665432 11 111111 1 13467888887765 4
Q ss_pred HHhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 337 EVLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
.++..+++ ||.-.. -++++||+++|+|+|+. |...+...+.+ .|.. + ..-+.+++.+++.+++.
T Consensus 258 ~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~~--~-~~~~~~~~~~~i~~ll~ 325 (360)
T cd04951 258 AYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGLI--V-PISDPEALANKIDEILK 325 (360)
T ss_pred HHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-CceE--e-CCCCHHHHHHHHHHHHh
Confidence 68888888 555432 46899999999999974 33444444433 2443 3 23578999999999985
No 110
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.40 E-value=0.05 Score=53.25 Aligned_cols=100 Identities=16% Similarity=0.163 Sum_probs=65.7
Q ss_pred cCCCeeEecccChH-HHhcccccceeeecc--ChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHH
Q 037999 323 TKERGCIVSWAPQE-EVLAHQAIGGFLTHS--GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (447)
Q Consensus 323 ~~~~~~~~~~~pq~-~lL~~~~~~~~ithg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 399 (447)
..+++.+.++.++. .++..+++-.+.++. ...+++||+++|+|+|+..... .....+.+ -..|..+ ..-+.+
T Consensus 259 ~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv-~~~d~~ 333 (372)
T cd04949 259 LEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLV-PKGDIE 333 (372)
T ss_pred CcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEe-CCCcHH
Confidence 34677777877664 688888884444442 2468999999999999864321 12233433 2567776 445799
Q ss_pred HHHHHHHHHHhH--hHHHHHHHHHHHHHHH
Q 037999 400 TIENLVRDLMDN--KRDKIMESTVQIAKMA 427 (447)
Q Consensus 400 ~l~~ai~~~l~~--~~~~~~~~a~~~~~~~ 427 (447)
++.++|.+++.+ ...++.+++++.++.+
T Consensus 334 ~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 334 ALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 999999999985 2344555555554443
No 111
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.37 E-value=0.096 Score=51.31 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=55.0
Q ss_pred CCeeEecccCh-HHHhcccccceee--ec--cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHH
Q 037999 325 ERGCIVSWAPQ-EEVLAHQAIGGFL--TH--SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (447)
Q Consensus 325 ~~~~~~~~~pq-~~lL~~~~~~~~i--th--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 399 (447)
+++.+.++..+ ..++..+++ || ++ |--++++||+++|+|+|+-...+ +...+.+ -..|..+ ..-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~-~~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALV-PPGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEe-CCCCHH
Confidence 45666665544 468888888 66 33 33469999999999999976533 3334433 2467766 345789
Q ss_pred HHHHHHHHHHhH
Q 037999 400 TIENLVRDLMDN 411 (447)
Q Consensus 400 ~l~~ai~~~l~~ 411 (447)
++.++|.+++.+
T Consensus 327 ~la~~i~~l~~~ 338 (374)
T TIGR03088 327 ALARALQPYVSD 338 (374)
T ss_pred HHHHHHHHHHhC
Confidence 999999999885
No 112
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.31 E-value=0.02 Score=57.53 Aligned_cols=138 Identities=18% Similarity=0.243 Sum_probs=87.7
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhh--hhcCCCeeEecccChH----
Q 037999 263 PSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELE--QGTKERGCIVSWAPQE---- 336 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pq~---- 336 (447)
++.-|||.+|--....+++.++.-++-|.+.+..++|..+.+... ... +-.... .-.++++.+.+-+.-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~g---e~r-f~ty~~~~Gl~p~riifs~va~k~eHvr 831 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG---EQR-FRTYAEQLGLEPDRIIFSPVAAKEEHVR 831 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccc---hHH-HHHHHHHhCCCccceeeccccchHHHHH
Confidence 345689999988888999999988888889999999999876432 110 000000 0123555555444422
Q ss_pred -HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHH-HHHhhcceeeEeCCCCCHHHHHHHHHH
Q 037999 337 -EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSR-CVSEIWKIGLDMKDTCDRSTIENLVRD 407 (447)
Q Consensus 337 -~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~-~~~~~~g~g~~~~~~~~~~~l~~ai~~ 407 (447)
..|..-.+.-+++. |..|.++.++.|||||.+|.-.--...|. .+.. +|+|..+.+ -..|-...+|+-
T Consensus 832 r~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak-~~eEY~~iaV~L 901 (966)
T KOG4626|consen 832 RGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK-NREEYVQIAVRL 901 (966)
T ss_pred hhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh-hHHHHHHHHHHh
Confidence 23444444445654 68899999999999999998554444443 3434 799987643 224444455543
No 113
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.25 E-value=0.048 Score=54.65 Aligned_cols=133 Identities=18% Similarity=0.251 Sum_probs=89.6
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhh---hh---cCCCeeEecccChH
Q 037999 263 PSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELE---QG---TKERGCIVSWAPQE 336 (447)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~pq~ 336 (447)
+++-+||+||+...+..++.+..=.+-|+..+-.++|....+. ....-..+. ++ ..++.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~------~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGD------DAEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCC------cHHHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 4567999999999999999888877778888889999886421 111111111 11 23566777777755
Q ss_pred H---Hhcccccceeee---ccChhhHHHHHHhCCceeecCccchhhH--HHHHHHhhcceeeEeCCCCCHHHHHHHHH
Q 037999 337 E---VLAHQAIGGFLT---HSGWNSTLESLVAGVPMICWPQIGDQQV--NSRCVSEIWKIGLDMKDTCDRSTIENLVR 406 (447)
Q Consensus 337 ~---lL~~~~~~~~it---hgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~~~~~~g~g~~~~~~~~~~~l~~ai~ 406 (447)
. =++-+++ |+. -||..|+.|+|+.|||+|.++ ++||- |+.-++...|+-..+. .-..+-++++|+
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 4 3344444 664 699999999999999999985 78875 4455544456655552 334566677764
No 114
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.07 E-value=0.3 Score=49.72 Aligned_cols=81 Identities=14% Similarity=0.201 Sum_probs=56.7
Q ss_pred CCCeeEecccChHHHhcccccceeeecc----ChhhHHHHHHhCCceeecCccchhhHHHHHHHhh----c-ceeeEeCC
Q 037999 324 KERGCIVSWAPQEEVLAHQAIGGFLTHS----GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEI----W-KIGLDMKD 394 (447)
Q Consensus 324 ~~~~~~~~~~pq~~lL~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~----~-g~g~~~~~ 394 (447)
.+|+.+.+...-.+++..+++ ||... --++++||+++|+|+|+-.. ......+.+. + ..|..+ .
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv-~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVV-P 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEE-C
Confidence 478888886566778888887 65432 23689999999999998533 3333333221 1 267666 4
Q ss_pred CCCHHHHHHHHHHHHhH
Q 037999 395 TCDRSTIENLVRDLMDN 411 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~ 411 (447)
.-+.+++.++|.+++.|
T Consensus 426 ~~d~~~la~ai~~ll~~ 442 (475)
T cd03813 426 PADPEALARAILRLLKD 442 (475)
T ss_pred CCCHHHHHHHHHHHhcC
Confidence 45799999999999986
No 115
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.04 E-value=0.22 Score=49.33 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=56.9
Q ss_pred CCCeeEecccChH-HHhcccccceee--ec--cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCC
Q 037999 324 KERGCIVSWAPQE-EVLAHQAIGGFL--TH--SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (447)
Q Consensus 324 ~~~~~~~~~~pq~-~lL~~~~~~~~i--th--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 397 (447)
.+++.+.+++++. .++.++++ || ++ .|. +.+.||+++|+|+|+.+...+.. ... -|.|..+. -+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~--~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA--AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC--CC
Confidence 3678888999864 67888888 65 32 354 46999999999999987543211 112 36677663 57
Q ss_pred HHHHHHHHHHHHhH
Q 037999 398 RSTIENLVRDLMDN 411 (447)
Q Consensus 398 ~~~l~~ai~~~l~~ 411 (447)
.+++.++|.++++|
T Consensus 349 ~~~la~ai~~ll~~ 362 (397)
T TIGR03087 349 PADFAAAILALLAN 362 (397)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999986
No 116
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=95.95 E-value=0.2 Score=51.28 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=64.6
Q ss_pred CCCeeEecccChHHHhcccccceeeec---cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-C--CC
Q 037999 324 KERGCIVSWAPQEEVLAHQAIGGFLTH---SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-D--TC 396 (447)
Q Consensus 324 ~~~~~~~~~~pq~~lL~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~--~~ 396 (447)
.+++...++.+...++..+++ ||.- =|+ .+++||+++|+|+|+.-..+ .+...+.+ -..|..+. + .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~-g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIED-NKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccC-CCCEEEEeCCcccc
Confidence 466788898888899999888 6652 333 68999999999999875421 12223423 24566664 1 12
Q ss_pred C----HHHHHHHHHHHHh-HhHHHHHHHHHHHHHHH
Q 037999 397 D----RSTIENLVRDLMD-NKRDKIMESTVQIAKMA 427 (447)
Q Consensus 397 ~----~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~ 427 (447)
+ .++++++|.+++. +...+|.+++.+.++.+
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc
Confidence 2 7889999999996 33345666666655443
No 117
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.90 E-value=0.18 Score=49.64 Aligned_cols=79 Identities=19% Similarity=0.295 Sum_probs=52.6
Q ss_pred CeeEe-cccChH---HHhcccccceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-CCC
Q 037999 326 RGCIV-SWAPQE---EVLAHQAIGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTC 396 (447)
Q Consensus 326 ~~~~~-~~~pq~---~lL~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~ 396 (447)
++... +++++. .++.++++ ||.-. | -.+++||+++|+|+|+.... .....+.+ -+.|..++ +..
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~~~~ 333 (388)
T TIGR02149 261 GIIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPPDNS 333 (388)
T ss_pred ceEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCCCCC
Confidence 35544 678764 46788887 66532 2 35789999999999986543 23444534 35687775 222
Q ss_pred C----HHHHHHHHHHHHhH
Q 037999 397 D----RSTIENLVRDLMDN 411 (447)
Q Consensus 397 ~----~~~l~~ai~~~l~~ 411 (447)
+ .+++.++|.+++.|
T Consensus 334 ~~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 334 DADGFQAELAKAINILLAD 352 (388)
T ss_pred cccchHHHHHHHHHHHHhC
Confidence 1 28999999999875
No 118
>PHA01633 putative glycosyl transferase group 1
Probab=95.67 E-value=0.22 Score=47.92 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=63.2
Q ss_pred cCCCeeEe---cccChH---HHhcccccceeeecc---Ch-hhHHHHHHhCCceeecCc------cchh------hHHHH
Q 037999 323 TKERGCIV---SWAPQE---EVLAHQAIGGFLTHS---GW-NSTLESLVAGVPMICWPQ------IGDQ------QVNSR 380 (447)
Q Consensus 323 ~~~~~~~~---~~~pq~---~lL~~~~~~~~ithg---G~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~ 380 (447)
.++++... +++++. .++..+++ ||.-. |+ ++++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45688877 455654 56778777 77642 43 578999999999998633 2332 33333
Q ss_pred HHHh-hcceeeEeCCCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHH
Q 037999 381 CVSE-IWKIGLDMKDTCDRSTIENLVRDLMD-NKRDKIMESTVQIAKMA 427 (447)
Q Consensus 381 ~~~~-~~g~g~~~~~~~~~~~l~~ai~~~l~-~~~~~~~~~a~~~~~~~ 427 (447)
...+ ..|.|..+ ...++++++++|.+++. ...+....++++.++.+
T Consensus 277 ~~~~~~~g~g~~~-~~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 277 EYYDKEHGQKWKI-HKFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred HhcCcccCceeee-cCCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 3322 23666666 46789999999999865 21123334444444443
No 119
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.54 E-value=0.027 Score=47.29 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHHH
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQL 81 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (447)
.+|++.|+++||+|+++++......-. . ...++.+..++- +... .. .. .. .....+.++
T Consensus 8 ~~l~~~L~~~G~~V~v~~~~~~~~~~~-~--------~~~~~~~~~~~~--~~~~--~~---~~----~~-~~~~~~~~~ 66 (160)
T PF13579_consen 8 RELARALAARGHEVTVVTPQPDPEDDE-E--------EEDGVRVHRLPL--PRRP--WP---LR----LL-RFLRRLRRL 66 (160)
T ss_dssp HHHHHHHHHTT-EEEEEEE---GGG-S-E--------EETTEEEEEE----S-SS--SG---GG----HC-CHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEecCCCCcccc-c--------ccCCceEEeccC--Cccc--hh---hh----hH-HHHHHHHHH
Confidence 579999999999999999755433211 0 112677777651 1110 00 00 00 112344555
Q ss_pred HhCCCCCCcEEEECCCcc-hHHHHHH-HcCCCeEEE
Q 037999 82 LMSPGLLPTCIISDSIMS-FTIDVAE-ELNIPIITF 115 (447)
Q Consensus 82 l~~~~~~~D~iI~D~~~~-~~~~~A~-~lgIP~v~~ 115 (447)
+.....+||+|.+..... +...++. ..++|.+..
T Consensus 67 l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~ 102 (160)
T PF13579_consen 67 LAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVT 102 (160)
T ss_dssp CHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE
T ss_pred HhhhccCCeEEEecccchhHHHHHHHHccCCcEEEE
Confidence 522223899999766433 3344555 789999874
No 120
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.46 E-value=0.026 Score=43.53 Aligned_cols=49 Identities=12% Similarity=0.314 Sum_probs=41.0
Q ss_pred ccccccCCCCCeEEEEEecccccC---CH--HHHHHHHHHHHhCCCcEEEEEec
Q 037999 255 CMTWLDSQPSRSVLYVSFGSFIKL---GR--EQILEFWHGMVNSGKRFLWVIRS 303 (447)
Q Consensus 255 ~~~~l~~~~~~~vv~vs~Gs~~~~---~~--~~~~~~~~~l~~~~~~~i~~~~~ 303 (447)
+..|+...+.++-|.||+||.... .. ..+..+++++.+.+..+|..+..
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~ 83 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPA 83 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETT
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCH
Confidence 446999888899999999998853 22 46888999999999999999864
No 121
>PLN02501 digalactosyldiacylglycerol synthase
Probab=94.97 E-value=5.3 Score=42.12 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=51.1
Q ss_pred CeeEecccChH-HHhcccccceeeecc---C-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHH
Q 037999 326 RGCIVSWAPQE-EVLAHQAIGGFLTHS---G-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRST 400 (447)
Q Consensus 326 ~~~~~~~~pq~-~lL~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 400 (447)
++...++.++. +++..+++ ||.-+ | -++++||+++|+|+|+.-.-+... + ..-+.|. +. -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGl-l~--~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCL-TY--KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeE-ec--CCHHH
Confidence 35556777765 58888888 77633 2 368999999999999976644221 2 2112233 22 36899
Q ss_pred HHHHHHHHHhH
Q 037999 401 IENLVRDLMDN 411 (447)
Q Consensus 401 l~~ai~~~l~~ 411 (447)
+.++|.++|.+
T Consensus 671 fAeAI~~LLsd 681 (794)
T PLN02501 671 FVAKVKEALAN 681 (794)
T ss_pred HHHHHHHHHhC
Confidence 99999999985
No 122
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=94.91 E-value=0.93 Score=44.37 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=52.0
Q ss_pred CCCeeEeccc--ChH---HHhcccccceeeeccC----hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCC
Q 037999 324 KERGCIVSWA--PQE---EVLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (447)
Q Consensus 324 ~~~~~~~~~~--pq~---~lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 394 (447)
.+++.+.++. ++. .++..+++ |+...- -.++.||+++|+|+|+....+ ....+.+ -..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC-
Confidence 4577777776 433 46777777 775432 359999999999999875432 2223433 25566553
Q ss_pred CCCHHHHHHHHHHHHhH
Q 037999 395 TCDRSTIENLVRDLMDN 411 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~ 411 (447)
+.+.+..+|.+++.+
T Consensus 323 --~~~~~a~~i~~ll~~ 337 (372)
T cd03792 323 --TVEEAAVRILYLLRD 337 (372)
T ss_pred --CcHHHHHHHHHHHcC
Confidence 467788899999875
No 123
>PRK14098 glycogen synthase; Provisional
Probab=94.71 E-value=0.4 Score=49.00 Aligned_cols=130 Identities=10% Similarity=0.067 Sum_probs=75.7
Q ss_pred EEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCCh---hhhhhcCCCeeEecccChH---HHh
Q 037999 267 VLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPV---ELEQGTKERGCIVSWAPQE---EVL 339 (447)
Q Consensus 267 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~pq~---~lL 339 (447)
.+++..|.... ...+.+.+.+..+.+.+.+++.+ +. |.. ..-+ .+.++.++++.+.++.+.. .++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~------G~~-~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GS------GDK-EYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eC------CCH-HHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH
Confidence 35566676653 34455555444454445565554 32 110 0111 2223456788888888874 578
Q ss_pred cccccceeeeccC---h-hhHHHHHHhCCceeecCccc--hhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 340 AHQAIGGFLTHSG---W-NSTLESLVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 340 ~~~~~~~~ithgG---~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+.+++ |+...= . .+.+||+++|+|.|+....+ |...+ ...+ -+.|..+ ...+.+++.++|.+++.
T Consensus 380 a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~-~~~G~l~-~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 380 AGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSED-KGSGFIF-HDYTPEALVAKLGEALA 450 (489)
T ss_pred HhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCC-CCceeEe-CCCCHHHHHHHHHHHHH
Confidence 88888 775431 1 37889999999888875532 32111 0111 2567776 44578999999998764
No 124
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=94.65 E-value=2 Score=44.05 Aligned_cols=75 Identities=21% Similarity=0.279 Sum_probs=50.3
Q ss_pred cCCCeeEecccCh-HHHhcccccceeeec---cC-hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCC
Q 037999 323 TKERGCIVSWAPQ-EEVLAHQAIGGFLTH---SG-WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (447)
Q Consensus 323 ~~~~~~~~~~~pq-~~lL~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 397 (447)
..+++.+.+|..+ ..+|..+++ ||.. -| -+++.||+++|+|+|+.... .+...+.+. ..|..++ .-+
T Consensus 453 L~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp-~~D 524 (578)
T PRK15490 453 ILERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILD-DAQ 524 (578)
T ss_pred CCCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEEC-CCC
Confidence 3478888888655 357888888 8753 34 46999999999999987543 334445442 6777774 234
Q ss_pred HHHHHHHH
Q 037999 398 RSTIENLV 405 (447)
Q Consensus 398 ~~~l~~ai 405 (447)
.+.+.+++
T Consensus 525 ~~aLa~ai 532 (578)
T PRK15490 525 TVNLDQAC 532 (578)
T ss_pred hhhHHHHH
Confidence 45555554
No 125
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.39 E-value=0.48 Score=48.21 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=75.2
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChh---hhhhcCCCeeEecccChH---HH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVE---LEQGTKERGCIVSWAPQE---EV 338 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~pq~---~l 338 (447)
..+++..|.... ...+.+.+.+..+.+.+.+++++-. |.. ...+. +.++.+.++.+....+.. .+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~-------g~~-~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~ 362 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGT-------GDP-ELEEALRELAERYPGNVRVIIGYDEALAHLI 362 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECC-------CCH-HHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence 345666677763 3445555555555444566665422 110 11111 122345667666555553 47
Q ss_pred hcccccceeeecc---Ch-hhHHHHHHhCCceeecCccc--hhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 339 LAHQAIGGFLTHS---GW-NSTLESLVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 339 L~~~~~~~~ithg---G~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+..+++ |+.-. |. .+.+||+++|+|.|+-...+ |.-.+...-.+ -+.|..+ ..-+.+++.++|.+++.
T Consensus 363 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~-~~~G~l~-~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 363 YAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAE-SGTGFLF-EEYDPGALLAALSRALR 436 (473)
T ss_pred HHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCC-CCceEEe-CCCCHHHHHHHHHHHHH
Confidence 777777 66432 33 48899999999999865532 22211100011 1677777 44578999999999886
No 126
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.64 E-value=0.73 Score=46.82 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=73.6
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCCh---hhhhhcCCCeeE-ecccChH--HH
Q 037999 266 SVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPV---ELEQGTKERGCI-VSWAPQE--EV 338 (447)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~pq~--~l 338 (447)
..+++..|.... ...+.+.+.+..+.+.+.+++++-. |.. ...+ .+.++.+.++.+ .+|-.+. .+
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~-------g~~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~ 353 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGT-------GDP-ELEEAFRALAARYPGKVGVQIGYDEALAHRI 353 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEec-------CcH-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 345666777663 3444444444444334667766532 110 0111 122334556554 3663222 46
Q ss_pred hcccccceeeec---cCh-hhHHHHHHhCCceeecCccc--hhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 339 LAHQAIGGFLTH---SGW-NSTLESLVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 339 L~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+..+++ ||.- -|. .+.+||+++|+|.|+....+ |.-.+...-.+ -+.|..+ ..-+.+++.++|.+++.
T Consensus 354 ~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv-~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 354 YAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVF-DDFNAEDLLRALRRALE 427 (466)
T ss_pred HhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEe-CCCCHHHHHHHHHHHHH
Confidence 788888 7653 233 48999999999999865422 32111100012 1677777 44578999999999886
No 127
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=93.42 E-value=2.3 Score=42.43 Aligned_cols=158 Identities=13% Similarity=0.183 Sum_probs=85.9
Q ss_pred ccccCCCCCeEEEEEeccccc------CCH----HHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCC-CCChhhhhhcC-
Q 037999 257 TWLDSQPSRSVLYVSFGSFIK------LGR----EQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVG-PVPVELEQGTK- 324 (447)
Q Consensus 257 ~~l~~~~~~~vv~vs~Gs~~~------~~~----~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~- 324 (447)
.|+.....+++|-|+.-.... ... +.+.++++.|.+.|+++++.--....+..+... ..-..+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 355432344567777553321 121 234456666666688887764321100000000 00111222332
Q ss_pred -CCeeEe--cccChH--HHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeE-eC-CCCC
Q 037999 325 -ERGCIV--SWAPQE--EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD-MK-DTCD 397 (447)
Q Consensus 325 -~~~~~~--~~~pq~--~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~-~~-~~~~ 397 (447)
.++.++ ++-+.+ .+++++++ +|.. =.-++.=|+..|||.+.+++ |+-.. ..+ +.+|.... ++ +.++
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~-~~~-~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSA-GIM-QQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHH-HHH-HHcCCccEEechhhCC
Confidence 333443 333443 68888877 7764 34567778899999999988 33332 233 33677755 44 7888
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHH
Q 037999 398 RSTIENLVRDLMDNKRDKIMESTVQ 422 (447)
Q Consensus 398 ~~~l~~ai~~~l~~~~~~~~~~a~~ 422 (447)
.+++.+.+.+++.++ +.++++.++
T Consensus 379 ~~~Li~~v~~~~~~r-~~~~~~l~~ 402 (426)
T PRK10017 379 DGSLQAMVADTLGQL-PALNARLAE 402 (426)
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHH
Confidence 999999999999842 444444333
No 128
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=92.70 E-value=1.9 Score=41.61 Aligned_cols=173 Identities=15% Similarity=0.152 Sum_probs=88.7
Q ss_pred ccccCCCCCeEEEEEecccccC---CHHHHHHHHHHHHh--CCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCe-eEe
Q 037999 257 TWLDSQPSRSVLYVSFGSFIKL---GREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERG-CIV 330 (447)
Q Consensus 257 ~~l~~~~~~~vv~vs~Gs~~~~---~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 330 (447)
+-+....+++++.+--||-... -...+.+.++.+.. .+.+|+.-+-..... .+... ....+. ...
T Consensus 180 ~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~------~~~~~---~~~~~~~~~~ 250 (381)
T COG0763 180 EKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYR------RIIEE---ALKWEVAGLS 250 (381)
T ss_pred HHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHH------HHHHH---HhhccccCce
Confidence 3343345678899999998742 22333334444442 245666654221000 00000 011111 111
Q ss_pred ccc-Ch--HHHhcccccceeeeccChhhHHHHHHhCCceeecCccc-hhhHHHHHHHhhcce-------eeEeC-----C
Q 037999 331 SWA-PQ--EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIG-DQQVNSRCVSEIWKI-------GLDMK-----D 394 (447)
Q Consensus 331 ~~~-pq--~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~~g~-------g~~~~-----~ 394 (447)
-++ ++ ..++..+++ .+.-+|- -+.|+..+|+|||+.=-.. =-+.-+++..+-+=+ |..+- +
T Consensus 251 ~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~ 327 (381)
T COG0763 251 LILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQE 327 (381)
T ss_pred EEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhh
Confidence 111 22 236667666 6666664 5789999999999862111 112234444332111 11111 3
Q ss_pred CCCHHHHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037999 395 TCDRSTIENLVRDLMDNK--RDKIMESTVQIAKMARDAVKEGGSSYRNLDKLI 445 (447)
Q Consensus 395 ~~~~~~l~~ai~~~l~~~--~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 445 (447)
.++++.|.+++..++.|. .+.+++...++.+.+ +.+++++.+.+.++
T Consensus 328 ~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l----~~~~~~e~aA~~vl 376 (381)
T COG0763 328 DCTPENLARALEELLLNGDRREALKEKFRELHQYL----REDPASEIAAQAVL 376 (381)
T ss_pred hcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH----cCCcHHHHHHHHHH
Confidence 688999999999999861 234555555555544 44557777666554
No 129
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=91.75 E-value=2.6 Score=31.74 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=49.5
Q ss_pred ccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcc-eeeEeCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 037999 350 HSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWK-IGLDMKDTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMAR 428 (447)
Q Consensus 350 hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~ 428 (447)
+|-..-+.|++++|+|+|.-+. ......+ +. | -++.. . +.+++.++|..+++| +..++ ++++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~-~--~~~el~~~i~~ll~~--~~~~~---~ia~~a~ 74 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY-N--DPEELAEKIEYLLEN--PEERR---RIAKNAR 74 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE-C--CHHHHHHHHHHHHCC--HHHHH---HHHHHHH
Confidence 3445689999999999998754 2233333 22 4 44444 2 899999999999996 43332 2233333
Q ss_pred HHHhcCCchHHHHHHHH
Q 037999 429 DAVKEGGSSYRNLDKLI 445 (447)
Q Consensus 429 ~~~~~~gs~~~~~~~~~ 445 (447)
+-+.+.=+...-++.|+
T Consensus 75 ~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHhCCHHHHHHHHH
Confidence 33333455555555554
No 130
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=91.04 E-value=0.73 Score=39.09 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
..|+++|+++||+||++++..
T Consensus 19 ~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 19 LNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp HHHHHHHHHTT-EEEEEESS-
T ss_pred HHHHHHHHHCCCEEEEEEcCC
Confidence 579999999999999998754
No 131
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=90.37 E-value=2 Score=36.90 Aligned_cols=91 Identities=19% Similarity=0.175 Sum_probs=49.7
Q ss_pred hCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhh---hHHHHHHHHhCCC
Q 037999 10 HAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPV---SKLAFLQLLMSPG 86 (447)
Q Consensus 10 ~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~---~~~~l~~ll~~~~ 86 (447)
++||+|++++........ +|++.+.+.. +.+...........++..... +...+.+|.++ +
T Consensus 1 q~gh~v~fl~~~~~~~~~-------------~GV~~~~y~~--~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~-G 64 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP-------------PGVRVVRYRP--PRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQ-G 64 (171)
T ss_pred CCCCEEEEEecCCCCCCC-------------CCcEEEEeCC--CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHc-C
Confidence 479999999954322111 2677666642 111000111111112222212 23333444333 3
Q ss_pred CCCcEEEECCCcchHHHHHHHc-CCCeEEEc
Q 037999 87 LLPTCIISDSIMSFTIDVAEEL-NIPIITFR 116 (447)
Q Consensus 87 ~~~D~iI~D~~~~~~~~~A~~l-gIP~v~~~ 116 (447)
=.||+||...-+..+.-+-+.+ ++|.+.+.
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 3789999998877778888888 89998863
No 132
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=90.05 E-value=4.9 Score=32.78 Aligned_cols=87 Identities=10% Similarity=0.129 Sum_probs=52.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHHH
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQL 81 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (447)
..+++.|.++||+|++++......... ...++.+..++-.. . ....++ . .. .+..+
T Consensus 14 ~~~~~~L~~~g~~V~ii~~~~~~~~~~----------~~~~i~~~~~~~~~------k--~~~~~~----~-~~-~l~k~ 69 (139)
T PF13477_consen 14 YNLAKELKKRGYDVHIITPRNDYEKYE----------IIEGIKVIRLPSPR------K--SPLNYI----K-YF-RLRKI 69 (139)
T ss_pred HHHHHHHHHCCCEEEEEEcCCCchhhh----------HhCCeEEEEecCCC------C--ccHHHH----H-HH-HHHHH
Confidence 578999999999999999854321111 11268877774221 0 011222 1 12 55677
Q ss_pred HhCCCCCCcEEEECCCcc-hH--HHHHHHcC-CCeEE
Q 037999 82 LMSPGLLPTCIISDSIMS-FT--IDVAEELN-IPIIT 114 (447)
Q Consensus 82 l~~~~~~~D~iI~D~~~~-~~--~~~A~~lg-IP~v~ 114 (447)
+.+. +||+|.+....+ +. ..++...+ +|.+.
T Consensus 70 ik~~--~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~ 104 (139)
T PF13477_consen 70 IKKE--KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIY 104 (139)
T ss_pred hccC--CCCEEEEecCChHHHHHHHHHHHcCCCCEEE
Confidence 7666 799998766554 22 23456678 88875
No 133
>PLN02939 transferase, transferring glycosyl groups
Probab=88.46 E-value=11 Score=41.31 Aligned_cols=83 Identities=12% Similarity=0.178 Sum_probs=54.7
Q ss_pred CCCeeEecccChH---HHhcccccceeeec-----cChhhHHHHHHhCCceeecCccc--hhhHH--HHHHHhhcceeeE
Q 037999 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH-----SGWNSTLESLVAGVPMICWPQIG--DQQVN--SRCVSEIWKIGLD 391 (447)
Q Consensus 324 ~~~~~~~~~~pq~---~lL~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~~~~~~g~g~~ 391 (447)
.+++.+.++.+.. .++..+++ ||.. || .+.+||+++|+|.|+....+ |...+ ...+.+.-+.|..
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfL 912 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFT 912 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEE
Confidence 4578888888764 47888887 8864 34 48999999999999876543 32221 1111111246766
Q ss_pred eCCCCCHHHHHHHHHHHHh
Q 037999 392 MKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 392 ~~~~~~~~~l~~ai~~~l~ 410 (447)
+. ..+++.+.++|.+++.
T Consensus 913 f~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 913 FL-TPDEQGLNSALERAFN 930 (977)
T ss_pred ec-CCCHHHHHHHHHHHHH
Confidence 63 4578899999988764
No 134
>PRK10125 putative glycosyl transferase; Provisional
Probab=88.38 E-value=19 Score=35.81 Aligned_cols=100 Identities=14% Similarity=0.089 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCCCcE-EEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccC-h---HHHhcccccceeeeccC----h
Q 037999 283 ILEFWHGMVNSGKRF-LWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAP-Q---EEVLAHQAIGGFLTHSG----W 353 (447)
Q Consensus 283 ~~~~~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q---~~lL~~~~~~~~ithgG----~ 353 (447)
...+++++...+..+ ++.++.. .. . ...++...++.. + ..++..+++ ||.-.= -
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g------~~-~--------~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKF------SP-F--------TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCC------Cc-c--------cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 466777777765433 4445321 10 0 123555556653 3 345666777 776432 3
Q ss_pred hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHH
Q 037999 354 NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVR 406 (447)
Q Consensus 354 ~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~ 406 (447)
++++||+++|+|+|+....+ -+ ..+ +. +.|..++ .-+.+++++++.
T Consensus 321 ~vilEAmA~G~PVVat~~gG-~~---Eiv-~~-~~G~lv~-~~d~~~La~~~~ 366 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA-AR---EVL-QK-SGGKTVS-EEEVLQLAQLSK 366 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC-hH---HhE-eC-CcEEEEC-CCCHHHHHhccC
Confidence 68999999999999987755 11 223 43 5687774 346777877544
No 135
>PLN02316 synthase/transferase
Probab=88.13 E-value=12 Score=41.61 Aligned_cols=105 Identities=11% Similarity=0.149 Sum_probs=63.1
Q ss_pred CCCeeEecccChH---HHhcccccceeeec-----cChhhHHHHHHhCCceeecCccc--hhhHHHH------HHHhhcc
Q 037999 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH-----SGWNSTLESLVAGVPMICWPQIG--DQQVNSR------CVSEIWK 387 (447)
Q Consensus 324 ~~~~~~~~~~pq~---~lL~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na~------~~~~~~g 387 (447)
++++.+....+.. .++..+++ |+.. || .+.+||+++|+|.|+....+ |...... .....-+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCC
Confidence 4567666444543 57777777 7753 34 58999999999888765532 3322210 0000014
Q ss_pred eeeEeCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCc
Q 037999 388 IGLDMKDTCDRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGS 436 (447)
Q Consensus 388 ~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs 436 (447)
.|..+ ...+++.|..+|.+++.+ |....+.++...++.+...=|
T Consensus 976 tGflf-~~~d~~aLa~AL~raL~~----~~~~~~~~~~~~r~~m~~dFS 1019 (1036)
T PLN02316 976 NGFSF-DGADAAGVDYALNRAISA----WYDGRDWFNSLCKRVMEQDWS 1019 (1036)
T ss_pred ceEEe-CCCCHHHHHHHHHHHHhh----hhhhHHHHHHHHHHHHHhhCC
Confidence 67777 456789999999999874 333344455555555543333
No 136
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=86.78 E-value=4.1 Score=38.83 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=41.8
Q ss_pred cChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccc--hhhHH-HHHHHhhcceeeEeC
Q 037999 333 APQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIG--DQQVN-SRCVSEIWKIGLDMK 393 (447)
Q Consensus 333 ~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--DQ~~n-a~~~~~~~g~g~~~~ 393 (447)
=|+...|+.++. .|||=--.+.+.||+..|+|+.++|.-. +.+.- ...+.+ .|+-..+.
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECC
Confidence 367788888776 5667667899999999999999999865 21211 234544 47777665
No 137
>PHA01630 putative group 1 glycosyl transferase
Probab=86.75 E-value=31 Score=33.23 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=45.2
Q ss_pred cccChHH---Hhcccccceeee--c-cC-hhhHHHHHHhCCceeecCccc--hhhHH---HHHHHhh-----------cc
Q 037999 331 SWAPQEE---VLAHQAIGGFLT--H-SG-WNSTLESLVAGVPMICWPQIG--DQQVN---SRCVSEI-----------WK 387 (447)
Q Consensus 331 ~~~pq~~---lL~~~~~~~~it--h-gG-~~s~~eal~~GvP~l~~P~~~--DQ~~n---a~~~~~~-----------~g 387 (447)
.++|+.+ ++..+++ |+. + .| -.++.||+++|+|+|+.-..+ |.-.+ +..+ +. .+
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIH 272 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCcc
Confidence 3466544 6788888 653 3 22 468999999999999976533 32221 1111 10 12
Q ss_pred eeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 388 IGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 388 ~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+|..+ ..+.+++.+++.++|.+
T Consensus 273 ~G~~v--~~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 273 VGYFL--DPDIEDAYQKLLEALAN 294 (331)
T ss_pred ccccc--CCCHHHHHHHHHHHHhC
Confidence 34444 23567777778787764
No 138
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=84.36 E-value=11 Score=38.09 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=62.2
Q ss_pred cccChHH---Hhcccccceeee---ccCh-hhHHHHHHhCCc----eeecCccchhhHHHHHHHhhcceeeEeCCCCCHH
Q 037999 331 SWAPQEE---VLAHQAIGGFLT---HSGW-NSTLESLVAGVP----MICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (447)
Q Consensus 331 ~~~pq~~---lL~~~~~~~~it---hgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 399 (447)
+.+++.+ ++..+++ |+. +=|+ .++.||+++|+| +|+--+.+-. ..+ +-|+.+ ...+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllV-nP~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLV-NPYDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEE-CCCCHH
Confidence 4566655 4677777 765 3365 478899999999 6665443321 112 245555 456799
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 400 TIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 400 ~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
+++++|.++++...++.+++.+++.+.+.+ -+...=.++|++
T Consensus 411 ~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~ 452 (456)
T TIGR02400 411 GMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLS 452 (456)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHH
Confidence 999999999983224555566666665442 344444555543
No 139
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=83.69 E-value=13 Score=37.32 Aligned_cols=136 Identities=11% Similarity=0.115 Sum_probs=82.7
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCC-CcEEEEEecCCCCCCCCCCCCChhhh--hhcCCCeeEe-cccC-h-HH
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELE--QGTKERGCIV-SWAP-Q-EE 337 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~p-q-~~ 337 (447)
+..+++++ +..++..+....++.| ..|=...... ..+.+. ++. +|+.+. ++.+ + .+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhc-CCcEEECCcChHHHHH
Confidence 44567666 2555666666666654 4554333211 112221 233 666665 7787 3 47
Q ss_pred HhcccccceeeeccC--hhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhHhHH-
Q 037999 338 VLAHQAIGGFLTHSG--WNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRD- 414 (447)
Q Consensus 338 lL~~~~~~~~ithgG--~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~~~~- 414 (447)
++..|.+-+-++|+. ..++.||+.+|+|+++.=.... +...+ .. |..+ ..-+.+++.++|.++|.+ +
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i-~~---g~l~-~~~~~~~m~~~i~~lL~d--~~ 413 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFI-AS---ENIF-EHNEVDQLISKLKDLLND--PN 413 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccccc-cC---Ccee-cCCCHHHHHHHHHHHhcC--HH
Confidence 999999988888877 5799999999999998743211 11122 11 3333 334689999999999986 4
Q ss_pred HHHHHHHHHHHHH
Q 037999 415 KIMESTVQIAKMA 427 (447)
Q Consensus 415 ~~~~~a~~~~~~~ 427 (447)
.++++..+-++.+
T Consensus 414 ~~~~~~~~q~~~a 426 (438)
T TIGR02919 414 QFRELLEQQREHA 426 (438)
T ss_pred HHHHHHHHHHHHh
Confidence 5565555544443
No 140
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=82.92 E-value=4.2 Score=41.83 Aligned_cols=89 Identities=18% Similarity=0.259 Sum_probs=59.8
Q ss_pred CCeeEecccC--h-HHHhcccccceeeecc---ChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 325 ERGCIVSWAP--Q-EEVLAHQAIGGFLTHS---GWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 325 ~~~~~~~~~p--q-~~lL~~~~~~~~ithg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
..+.+.++.. + ..++.++.+ +|.=+ |.++.+||+.+|+|+| .......|.+ ..-|..+ -+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li---~d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII---DDI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe---CCH
Confidence 4677778888 3 357778777 88755 6779999999999999 2222334433 3556665 468
Q ss_pred HHHHHHHHHHHhH--hHHHHHHHHHHHHHH
Q 037999 399 STIENLVRDLMDN--KRDKIMESTVQIAKM 426 (447)
Q Consensus 399 ~~l~~ai~~~l~~--~~~~~~~~a~~~~~~ 426 (447)
.++.++|..+|.+ ....+...+-+.++.
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDD 505 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9999999999984 223344444444443
No 141
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=82.40 E-value=9.9 Score=33.34 Aligned_cols=49 Identities=24% Similarity=0.254 Sum_probs=36.4
Q ss_pred cCCCeeEecccCh-H--H-HhcccccceeeeccC----hhhHHHHHHhCCceeecCccc
Q 037999 323 TKERGCIVSWAPQ-E--E-VLAHQAIGGFLTHSG----WNSTLESLVAGVPMICWPQIG 373 (447)
Q Consensus 323 ~~~~~~~~~~~pq-~--~-lL~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~ 373 (447)
..+|+.+.+++++ + . ++..+++ +++... -+++.||+++|+|+|+.+..+
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 4578999988633 2 2 4444777 777775 689999999999999987644
No 142
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=81.98 E-value=51 Score=31.85 Aligned_cols=84 Identities=20% Similarity=0.275 Sum_probs=54.5
Q ss_pred cCCHHHHHHHHHHHHh--CCCcEEEEEecCCCCCCCCCCCCChhhhh--hcCCCeeEecccChH---HHhcccccceeee
Q 037999 277 KLGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELEQ--GTKERGCIVSWAPQE---EVLAHQAIGGFLT 349 (447)
Q Consensus 277 ~~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq~---~lL~~~~~~~~it 349 (447)
+...+.+.+++..+-+ ...+|+..-+ |+....-++..+ .+.+++.+.+-+|++ ++|.+..+ |++
T Consensus 207 rKGiDll~~iIp~vc~~~p~vrfii~GD-------GPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--Fln 277 (426)
T KOG1111|consen 207 RKGIDLLLEIIPSVCDKHPEVRFIIIGD-------GPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLN 277 (426)
T ss_pred ccchHHHHHHHHHHHhcCCCeeEEEecC-------CcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcE--Eec
Confidence 4556777776666544 2467766543 322222222222 356889999999986 47888888 886
Q ss_pred ccC----hhhHHHHHHhCCceeec
Q 037999 350 HSG----WNSTLESLVAGVPMICW 369 (447)
Q Consensus 350 hgG----~~s~~eal~~GvP~l~~ 369 (447)
-.= --.+.||..+|.|++..
T Consensus 278 tSlTEafc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 278 TSLTEAFCMVIVEAASCGLPVVST 301 (426)
T ss_pred cHHHHHHHHHHHHHHhCCCEEEEe
Confidence 542 13688999999999965
No 143
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=80.64 E-value=13 Score=27.98 Aligned_cols=79 Identities=20% Similarity=0.218 Sum_probs=46.1
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.+++.|.+.|+++ ++|+.....+.+. |+....+......+ .+.+.+
T Consensus 2 ~~~~~~~l~~lG~~i--~AT~gTa~~L~~~-----------Gi~~~~~~~ki~~~-------------------~~~i~~ 49 (90)
T smart00851 2 LVELAKRLAELGFEL--VATGGTAKFLREA-----------GLPVKTLHPKVHGG-------------------ILAILD 49 (90)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHHC-----------CCcceeccCCCCCC-------------------CHHHHH
Confidence 478999999999998 3454556666554 44432111000000 123455
Q ss_pred HHhCCCCCCcEEEECCC---------cchHHHHHHHcCCCeE
Q 037999 81 LLMSPGLLPTCIISDSI---------MSFTIDVAEELNIPII 113 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~---------~~~~~~~A~~lgIP~v 113 (447)
++.+. ++|+||.-.. ...-..+|...+||++
T Consensus 50 ~i~~g--~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 50 LIKNG--EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HhcCC--CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 55554 7999987432 1134457888999976
No 144
>PRK00654 glgA glycogen synthase; Provisional
Probab=78.05 E-value=14 Score=37.45 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=17.5
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
.|+++|+++||+|+++++.
T Consensus 25 ~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 25 ALPKALAALGHDVRVLLPG 43 (466)
T ss_pred HHHHHHHHCCCcEEEEecC
Confidence 6899999999999999974
No 145
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.80 E-value=5.1 Score=37.38 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=56.1
Q ss_pred CCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHH--HHHHHhhcceeeEeCCCCCHHHH
Q 037999 325 ERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVN--SRCVSEIWKIGLDMKDTCDRSTI 401 (447)
Q Consensus 325 ~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n--a~~~~~~~g~g~~~~~~~~~~~l 401 (447)
+|..+. .|-...++|.++++ .|--.|- .+-+++-.|+|+|.+|-.+-|+.- |.+-..-+|+.+.+-+ .+++.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~--~~aq~ 368 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR--PEAQA 368 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC--Cchhh
Confidence 455444 66666778887777 5544432 233457789999999999999875 4444344677776642 22333
Q ss_pred HHH-HHHHHhHhHHHHHHHHH
Q 037999 402 ENL-VRDLMDNKRDKIMESTV 421 (447)
Q Consensus 402 ~~a-i~~~l~~~~~~~~~~a~ 421 (447)
... .++++.| +.+.+.++
T Consensus 369 a~~~~q~ll~d--p~r~~air 387 (412)
T COG4370 369 AAQAVQELLGD--PQRLTAIR 387 (412)
T ss_pred HHHHHHHHhcC--hHHHHHHH
Confidence 333 4448887 66666555
No 146
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=77.74 E-value=9.1 Score=38.79 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=57.3
Q ss_pred ecccChHH---Hhcccccceeee---ccCh-hhHHHHHHhCCc----eeecCccchhhHHHHHHHhhcceeeEeCCCCCH
Q 037999 330 VSWAPQEE---VLAHQAIGGFLT---HSGW-NSTLESLVAGVP----MICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (447)
Q Consensus 330 ~~~~pq~~---lL~~~~~~~~it---hgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 398 (447)
.+++++.+ ++..+++ ||. +-|+ .++.||+++|+| +|+--..+- + +...-|..+ ...+.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~----~~~~~g~lv-~p~d~ 414 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A----EELSGALLV-NPYDI 414 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h----hhcCCCEEE-CCCCH
Confidence 36778765 5777777 663 3455 477999999999 554422211 0 001235555 44579
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHh
Q 037999 399 STIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLIK 446 (447)
Q Consensus 399 ~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 446 (447)
++++++|.+++.+..++.+++.++..+.+. .=+...-.++|++
T Consensus 415 ~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~ 457 (460)
T cd03788 415 DEVADAIHRALTMPLEERRERHRKLREYVR-----THDVQAWANSFLD 457 (460)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHH
Confidence 999999999998421333333333333332 2344444455543
No 147
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=76.84 E-value=13 Score=34.08 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHD 25 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~ 25 (447)
-.|++.|. .+++||++.+..+..
T Consensus 17 ~aL~~al~-~~~dV~VVAP~~~qS 39 (252)
T COG0496 17 RALARALR-EGADVTVVAPDREQS 39 (252)
T ss_pred HHHHHHHh-hCCCEEEEccCCCCc
Confidence 36888888 999999999976543
No 148
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=75.99 E-value=2.6 Score=32.30 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=49.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.+|++|++.|| .+++|+...+.+.+. |+....+.+....+.. .. -...+.+
T Consensus 2 ~~~~a~~l~~lG~--~i~AT~gTa~~L~~~-----------Gi~~~~v~~~~~~~~~-~~-------------g~~~i~~ 54 (95)
T PF02142_consen 2 IVPLAKRLAELGF--EIYATEGTAKFLKEH-----------GIEVTEVVNKIGEGES-PD-------------GRVQIMD 54 (95)
T ss_dssp HHHHHHHHHHTTS--EEEEEHHHHHHHHHT-----------T--EEECCEEHSTG-G-GT-------------HCHHHHH
T ss_pred HHHHHHHHHHCCC--EEEEChHHHHHHHHc-----------CCCceeeeeecccCcc-CC-------------chhHHHH
Confidence 4789999999995 567777778887766 6775555321111100 00 0014566
Q ss_pred HHhCCCCCCcEEEECCCcch---------HHHHHHHcCCCeE
Q 037999 81 LLMSPGLLPTCIISDSIMSF---------TIDVAEELNIPII 113 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~~~~---------~~~~A~~lgIP~v 113 (447)
++++. ++|+||....-.- -..+|..++||++
T Consensus 55 ~i~~~--~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 55 LIKNG--KIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHTT--SEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred HHHcC--CeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 66665 7999986554321 1346778888876
No 149
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=74.64 E-value=11 Score=39.04 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=45.1
Q ss_pred ChHHHhcccccceeee-ccCh-hhHHHHHHhCCceeecCccc-hhhHHHHHHHhhcceeeEeC-C-----CCCHHHHHHH
Q 037999 334 PQEEVLAHQAIGGFLT-HSGW-NSTLESLVAGVPMICWPQIG-DQQVNSRCVSEIWKIGLDMK-D-----TCDRSTIENL 404 (447)
Q Consensus 334 pq~~lL~~~~~~~~it-hgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~~g~g~~~~-~-----~~~~~~l~~a 404 (447)
+..+++..|++.+|-+ +=|+ .+++||+++|+|+|+-...+ ..... ..+.+....|+.+. . .-+.++|+++
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHH
Confidence 3566778888833322 3454 48999999999999976632 22222 11211112566664 1 1245777778
Q ss_pred HHHHHh
Q 037999 405 VRDLMD 410 (447)
Q Consensus 405 i~~~l~ 410 (447)
+.+++.
T Consensus 546 m~~~~~ 551 (590)
T cd03793 546 MYEFCQ 551 (590)
T ss_pred HHHHhC
Confidence 877775
No 150
>PRK14099 glycogen synthase; Provisional
Probab=73.62 E-value=27 Score=35.63 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=45.2
Q ss_pred cCCCe-eEecccChHH-Hh-cccccceeeec---cC-hhhHHHHHHhCCceeecCccc--hhhHHHHHHHhh--cceeeE
Q 037999 323 TKERG-CIVSWAPQEE-VL-AHQAIGGFLTH---SG-WNSTLESLVAGVPMICWPQIG--DQQVNSRCVSEI--WKIGLD 391 (447)
Q Consensus 323 ~~~~~-~~~~~~pq~~-lL-~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~--~g~g~~ 391 (447)
.++++ ...+|-.+.. ++ ..+++ |+.- =| -.+.+||+++|+|.|+....+ |--.+.....+. -+.|..
T Consensus 348 ~~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l 425 (485)
T PRK14099 348 YPGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQ 425 (485)
T ss_pred CCCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEE
Confidence 34555 4557733322 23 33555 7753 22 247899999997666654322 322111111010 146777
Q ss_pred eCCCCCHHHHHHHHHHH
Q 037999 392 MKDTCDRSTIENLVRDL 408 (447)
Q Consensus 392 ~~~~~~~~~l~~ai~~~ 408 (447)
+ ..-+.+++.++|.++
T Consensus 426 ~-~~~d~~~La~ai~~a 441 (485)
T PRK14099 426 F-SPVTADALAAALRKT 441 (485)
T ss_pred e-CCCCHHHHHHHHHHH
Confidence 7 445789999999874
No 151
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=72.36 E-value=18 Score=28.31 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=50.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.+++.|.+.|+++ ++++...+.+... |+.+..+.... ...+.+.+
T Consensus 15 ~~~~~~~l~~~G~~l--~aT~gT~~~l~~~-----------gi~~~~v~~~~--------------------~~~~~i~~ 61 (110)
T cd01424 15 AVEIAKRLAELGFKL--VATEGTAKYLQEA-----------GIPVEVVNKVS--------------------EGRPNIVD 61 (110)
T ss_pred HHHHHHHHHHCCCEE--EEchHHHHHHHHc-----------CCeEEEEeecC--------------------CCchhHHH
Confidence 367899999999988 3555566666554 55544442000 01244566
Q ss_pred HHhCCCCCCcEEEECCC-------cchHHHHHHHcCCCeEE
Q 037999 81 LLMSPGLLPTCIISDSI-------MSFTIDVAEELNIPIIT 114 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~-------~~~~~~~A~~lgIP~v~ 114 (447)
++.+. ++|+||.-.- .++-...|-.+|||++.
T Consensus 62 ~i~~~--~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 62 LIKNG--EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred HHHcC--CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 66555 7999997432 24556778899999995
No 152
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=71.45 E-value=89 Score=29.68 Aligned_cols=81 Identities=19% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCeeEe-cccCh---HHHhcccccceeeec--cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-CCCC
Q 037999 325 ERGCIV-SWAPQ---EEVLAHQAIGGFLTH--SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCD 397 (447)
Q Consensus 325 ~~~~~~-~~~pq---~~lL~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~~ 397 (447)
+|+.+. +++|- ..+|++|+++.|+++ =|.|++.-.++.|+|+++- .+-+.+.... + .|+-+-.+ +.++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e-~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-E-QGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-h-CCCeEEecCCccc
Confidence 677776 77774 579999999888886 4899999999999999975 3444444433 4 47777655 7788
Q ss_pred HHHHHHHHHHHHh
Q 037999 398 RSTIENLVRDLMD 410 (447)
Q Consensus 398 ~~~l~~ai~~~l~ 410 (447)
...+.++=+++..
T Consensus 281 ~~~v~e~~rql~~ 293 (322)
T PRK02797 281 EDIVREAQRQLAS 293 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 8888777665543
No 153
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=69.58 E-value=33 Score=31.61 Aligned_cols=22 Identities=41% Similarity=0.377 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
..|++.|.+ +|+|+++.|....
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 17 NTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCCC
Confidence 468888865 6899999987644
No 154
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=69.52 E-value=94 Score=28.67 Aligned_cols=79 Identities=23% Similarity=0.386 Sum_probs=50.7
Q ss_pred CCeeEecccCh---HHHhcccccceeeec---cChh-hHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCC
Q 037999 325 ERGCIVSWAPQ---EEVLAHQAIGGFLTH---SGWN-STLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (447)
Q Consensus 325 ~~~~~~~~~pq---~~lL~~~~~~~~ith---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 397 (447)
+++...+++++ ..++..+++ ++.. .|.| ++.||+++|+|+|..... .....+ ...+.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCCCC
Confidence 57777899882 346666666 5555 3554 469999999999765442 222223 2212466 322236
Q ss_pred HHHHHHHHHHHHhH
Q 037999 398 RSTIENLVRDLMDN 411 (447)
Q Consensus 398 ~~~l~~ai~~~l~~ 411 (447)
.+++..++..++++
T Consensus 329 ~~~~~~~i~~~~~~ 342 (381)
T COG0438 329 VEELADALEQLLED 342 (381)
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999876
No 155
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=69.18 E-value=31 Score=31.85 Aligned_cols=22 Identities=36% Similarity=0.440 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
..|++.|.+.| +|+++.|....
T Consensus 22 ~aL~~~l~~~g-~V~VvAP~~~~ 43 (257)
T PRK13932 22 HVLAASMKKIG-RVTVVAPAEPH 43 (257)
T ss_pred HHHHHHHHhCC-CEEEEcCCCCC
Confidence 47899998888 79999886643
No 156
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=68.15 E-value=28 Score=27.47 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=48.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.+|+.|...||++ ++|+.....+... |+....+... +.+ ..+.+.+
T Consensus 14 ~~~~a~~l~~~G~~i--~AT~gTa~~L~~~-----------Gi~~~~v~~~-~~~------------------g~~~i~~ 61 (112)
T cd00532 14 LVDLAPKLSSDGFPL--FATGGTSRVLADA-----------GIPVRAVSKR-HED------------------GEPTVDA 61 (112)
T ss_pred HHHHHHHHHHCCCEE--EECcHHHHHHHHc-----------CCceEEEEec-CCC------------------CCcHHHH
Confidence 478999999999987 4555666666654 5554444211 000 1244555
Q ss_pred HHhC-CCCCCcEEEE--CCCc--------chHHHHHHHcCCCeEE
Q 037999 81 LLMS-PGLLPTCIIS--DSIM--------SFTIDVAEELNIPIIT 114 (447)
Q Consensus 81 ll~~-~~~~~D~iI~--D~~~--------~~~~~~A~~lgIP~v~ 114 (447)
++.+ . ++|+||. |... +--...|-.+|||++.
T Consensus 62 ~i~~~g--~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T 104 (112)
T cd00532 62 AIAEKG--KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTT 104 (112)
T ss_pred HHhCCC--CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEE
Confidence 6655 4 7999986 3222 1223468889999986
No 157
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=67.77 E-value=11 Score=36.91 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=67.7
Q ss_pred CCCeeEe-cccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC----C--CC
Q 037999 324 KERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK----D--TC 396 (447)
Q Consensus 324 ~~~~~~~-~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~----~--~~ 396 (447)
.+++..+ ...+-.++|..+++ .||--. ..+.|.+..++|++....-.|.+... .|.-.... + .-
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~------rg~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE------RGFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT------SSBSS-TTTSSSS-EES
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc------cCCCCchHhhCCCceeC
Confidence 3566665 55567899999999 999874 58889999999999876555554321 23333321 1 24
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037999 397 DRSTIENLVRDLMDNKRDKIMESTVQIAKMARDAVKEGGSSYRNLDKLI 445 (447)
Q Consensus 397 ~~~~l~~ai~~~l~~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 445 (447)
+.++|.++|..++.+ ...++++.++..+.+-.. .+|.++++-++.++
T Consensus 322 ~~~eL~~~i~~~~~~-~~~~~~~~~~~~~~~~~~-~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 322 NFEELIEAIENIIEN-PDEYKEKREKFRDKFFKY-NDGNSSERIVNYIF 368 (369)
T ss_dssp SHHHHHHHHTTHHHH-HHHTHHHHHHHHHHHSTT---S-HHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhC-CHHHHHHHHHHHHHhCCC-CCchHHHHHHHHHh
Confidence 689999999998874 145666667777776553 55777777666554
No 158
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.52 E-value=19 Score=33.61 Aligned_cols=95 Identities=13% Similarity=0.171 Sum_probs=57.7
Q ss_pred CeEEEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhc-CCCee-Eecc--cCh-H
Q 037999 265 RSVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGT-KERGC-IVSW--APQ-E 336 (447)
Q Consensus 265 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~pq-~ 336 (447)
++.|.+..|+.. ..+.+.+.++++.+.+.++++++....+. ...-..+.+.. ..++. +.+- +.+ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-------~~~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-------RELAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-------HHHHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 455667776654 47789999999999887888876542210 01111111111 12222 2222 222 4
Q ss_pred HHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
.++.++++ ||+.-. |.++=|.+.|+|++++
T Consensus 194 ~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 68889888 999854 5666667889999986
No 159
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=66.14 E-value=22 Score=28.16 Aligned_cols=83 Identities=23% Similarity=0.241 Sum_probs=49.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.+++.|.+.|+++ ++++...+.+... |+....+......+. .+ .+.+.+
T Consensus 15 ~~~~a~~l~~~G~~i--~aT~gTa~~L~~~-----------gi~~~~v~~~~~~~~----~~------------~~~i~~ 65 (116)
T cd01423 15 LLPTAQKLSKLGYKL--YATEGTADFLLEN-----------GIPVTPVAWPSEEPQ----ND------------KPSLRE 65 (116)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHHc-----------CCCceEeeeccCCCC----CC------------chhHHH
Confidence 467899999999888 3555666666554 444433321000000 00 145566
Q ss_pred HHhCCCCCCcEEEECCC---------cchHHHHHHHcCCCeEE
Q 037999 81 LLMSPGLLPTCIISDSI---------MSFTIDVAEELNIPIIT 114 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~---------~~~~~~~A~~lgIP~v~ 114 (447)
++.+. ++|+||.-+. .+.....|-.+|||++.
T Consensus 66 ~i~~~--~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~iT 106 (116)
T cd01423 66 LLAEG--KIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLIT 106 (116)
T ss_pred HHHcC--CceEEEECCCCCCCccccCcEeeehhhHhhCCcccc
Confidence 66654 7999997432 23455678899999973
No 160
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=65.71 E-value=24 Score=30.97 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=24.3
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCc
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 119 (447)
.||+|| .|...- .+..=|.++|||.+.+.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 789877 666544 66677889999999986554
No 161
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=64.34 E-value=49 Score=30.33 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHD 25 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~ 25 (447)
..|++.|.+.| +|+++.+.....
T Consensus 17 ~aL~~~l~~~g-~V~VvAP~~~~S 39 (244)
T TIGR00087 17 RALYQALKELG-EVTVVAPARQRS 39 (244)
T ss_pred HHHHHHHHhCC-CEEEEeCCCCcc
Confidence 47899999998 899999876443
No 162
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=64.25 E-value=29 Score=33.04 Aligned_cols=131 Identities=8% Similarity=0.024 Sum_probs=74.5
Q ss_pred CCeEEEEEecc-cc--cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecc--cCh-HH
Q 037999 264 SRSVLYVSFGS-FI--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSW--APQ-EE 337 (447)
Q Consensus 264 ~~~vv~vs~Gs-~~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pq-~~ 337 (447)
+++.|.+..|+ .. ..+.+.+.++++.+.+.+.++++..+.+.. ......+.+..+. ..+.+- ++| ..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e------~~~~~~i~~~~~~-~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAE------KQRAERIAEALPG-AVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHH------HHHHHHHHhhCCC-CeecCCCCHHHHHH
Confidence 34555555554 33 478899999999998767777766432110 0011112112222 233332 334 46
Q ss_pred HhcccccceeeeccChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceee-Ee-C---CCCCHHHHHHHHHHHH
Q 037999 338 VLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGL-DM-K---DTCDRSTIENLVRDLM 409 (447)
Q Consensus 338 lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~-~~-~---~~~~~~~l~~ai~~~l 409 (447)
++.++++ ||+.- -|.++=|.+.|+|.|++ |+ +.+..+.. -+|-.. .+ . ..++++++.++++++|
T Consensus 251 li~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l--fg--~t~p~~~~-P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LLAGADA--VVGVD-TGLTHLAAALDKPTVTL--YG--ATDPGRTG-GYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE--EC--CCCHhhcc-cCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 8889888 99875 46777778889999986 32 11111110 012211 11 1 5789999999998764
No 163
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=63.39 E-value=53 Score=30.34 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=17.6
Q ss_pred HHHHHHHhCCCEEEEEeCCcc
Q 037999 3 TLAELFSHAGFRVTFVNTEQY 23 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~ 23 (447)
.|+++|.++||+|+..+...+
T Consensus 14 ~la~~L~~~g~~v~~s~~t~~ 34 (256)
T TIGR00715 14 AIAKGLIAQGIEILVTVTTSE 34 (256)
T ss_pred HHHHHHHhCCCeEEEEEccCC
Confidence 588999999999998887554
No 164
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=63.00 E-value=33 Score=29.87 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=19.8
Q ss_pred CCcEEEECCCcchHH---HHHHHcCCCeEEE
Q 037999 88 LPTCIISDSIMSFTI---DVAEELNIPIITF 115 (447)
Q Consensus 88 ~~D~iI~D~~~~~~~---~~A~~lgIP~v~~ 115 (447)
++|+|+......... ..+...++|.+..
T Consensus 51 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 81 (229)
T cd01635 51 KPDVVHAHGYYPAPLALLLAARLLGIPLVLT 81 (229)
T ss_pred CCCEEEEcCCCcHHHHHHHHHhhCCCCEEEE
Confidence 899999777655333 3566789998764
No 165
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=62.94 E-value=50 Score=30.38 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
.+|++.|++ +|+|+++.|....
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 17 IILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCCC
Confidence 468888865 6799999987643
No 166
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=62.81 E-value=1.4e+02 Score=28.34 Aligned_cols=94 Identities=20% Similarity=0.161 Sum_probs=55.8
Q ss_pred HHHHHHHhCCCEEEEEeCCcc--hhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHH-HHHHhHhhhhHHHHH
Q 037999 3 TLAELFSHAGFRVTFVNTEQY--HDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIK-DWFCSDKPVSKLAFL 79 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~--~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 79 (447)
.|-..|..+||+|.+-+-... .+.+... |+.+..+.. .....+. .+.....+ .-.+.
T Consensus 18 ~lI~elekkG~ev~iT~rd~~~v~~LLd~y-----------gf~~~~Igk-------~g~~tl~~Kl~~~~eR--~~~L~ 77 (346)
T COG1817 18 NLIWELEKKGHEVLITCRDFGVVTELLDLY-----------GFPYKSIGK-------HGGVTLKEKLLESAER--VYKLS 77 (346)
T ss_pred HHHHHHHhCCeEEEEEEeecCcHHHHHHHh-----------CCCeEeecc-------cCCccHHHHHHHHHHH--HHHHH
Confidence 355788999999987764322 2233333 666666631 0111122 22222221 22345
Q ss_pred HHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCCc
Q 037999 80 QLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 80 ~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~ 119 (447)
++..+. +||+.+. ...+-+..+|--+|+|.++|.-..
T Consensus 78 ki~~~~--kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 78 KIIAEF--KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHhhc--CCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 555555 8999998 556677889999999999986544
No 167
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=62.62 E-value=31 Score=32.01 Aligned_cols=43 Identities=23% Similarity=0.248 Sum_probs=34.5
Q ss_pred CeeEecccChHHHhcccccceeeeccChhhHHHHHHhCCceeecCc
Q 037999 326 RGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICWPQ 371 (447)
Q Consensus 326 ~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~ 371 (447)
.+.+.+-.+-.++|.+++. +||-.+ ..-.||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 3444577788899999988 888765 477999999999999743
No 168
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=61.82 E-value=64 Score=29.88 Aligned_cols=97 Identities=11% Similarity=-0.032 Sum_probs=47.9
Q ss_pred HHHHHHHHhC---CCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 2 LTLAELFSHA---GFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 2 l~La~~La~r---Gh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
.+|++.|... |++|+++.|.....-.... .+....+++..+.++. ......+.. ...-.+
T Consensus 17 ~aL~~~l~~~~~~~~~V~VVAP~~eqSg~gha------iT~~~pl~~~~~~~~~-----yav~GTPaD------CV~lal 79 (261)
T PRK13931 17 EVLEQIATELAGPDGEVWTVAPAFEQSGVGHC------ISYTHPMMIAELGPRR-----FAAEGSPAD------CVLAAL 79 (261)
T ss_pred HHHHHHHHHhccCCCeEEEEeCCCCCCCCccc------ccCCCCeEEEEeCCCe-----EEEcCchHH------HHHHHH
Confidence 3577777663 4799999987643322111 1111235555543110 010111111 111223
Q ss_pred HHHHhCCCCCCcEEEE----------CCCcchH---HHHHHHcCCCeEEEcC
Q 037999 79 LQLLMSPGLLPTCIIS----------DSIMSFT---IDVAEELNIPIITFRP 117 (447)
Q Consensus 79 ~~ll~~~~~~~D~iI~----------D~~~~~~---~~~A~~lgIP~v~~~~ 117 (447)
..++.. .+||+||+ |.+++.. +.-|..+|||.+.++.
T Consensus 80 ~~~~~~--~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 80 YDVMKD--APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred HHhcCC--CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 344432 27899996 4444433 3345568999999864
No 169
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=61.24 E-value=33 Score=31.15 Aligned_cols=32 Identities=22% Similarity=0.459 Sum_probs=23.9
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCc
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 119 (447)
-||+++ +|+-.- -|..=|.++|||+|.+.-+-
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn 189 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTN 189 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCC
Confidence 599766 777654 56667889999999975543
No 170
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=60.77 E-value=30 Score=33.12 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=25.5
Q ss_pred CCCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCch
Q 037999 87 LLPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 87 ~~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 120 (447)
..||+|| +|...- .+..=|.++|||+|.+.-+.+
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 3689766 777654 677789999999999765443
No 171
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=60.70 E-value=50 Score=30.36 Aligned_cols=22 Identities=27% Similarity=0.258 Sum_probs=17.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
..|++.|.+. |+|+++.+....
T Consensus 17 ~aL~~~l~~~-~~V~VvAP~~~q 38 (250)
T PRK00346 17 RALAEALREL-ADVTVVAPDRER 38 (250)
T ss_pred HHHHHHHHhC-CCEEEEeCCCCC
Confidence 4688999988 799999986543
No 172
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=60.13 E-value=57 Score=29.97 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=26.3
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcch-------HHHHHHHcCCCeEEEc
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSF-------TIDVAEELNIPIITFR 116 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~~ 116 (447)
...+.+++.+. ++++|| |...+. +..+|+++|||++-|-
T Consensus 54 ~~~l~~~l~~~--~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 54 AEGLAAYLREE--GIDLVI-DATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHC--CCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 35667777665 788876 443333 3456789999999874
No 173
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=59.59 E-value=27 Score=32.48 Aligned_cols=81 Identities=21% Similarity=0.178 Sum_probs=49.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
++.||++|.++|..++|++.+...+-+-+. .. ++.+. ..+. .+
T Consensus 21 ~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~-~~--------~f~~~-----------------------~~~~-----~n 63 (318)
T COG3980 21 TLTLARELEKRGFACLFLTKQDIEAIIHKV-YE--------GFKVL-----------------------EGRG-----NN 63 (318)
T ss_pred HHHHHHHHHhcCceEEEecccchhhhhhhh-hh--------hccce-----------------------eeec-----cc
Confidence 368999999999999999986533311110 00 11100 0000 00
Q ss_pred HHhCCCCCCcEEEECCCcchH---HHHHHHcCCCeEEEcCCch
Q 037999 81 LLMSPGLLPTCIISDSIMSFT---IDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~~~~~---~~~A~~lgIP~v~~~~~~~ 120 (447)
.+.+. ++|++|.|....-+ ..+..+.+.+.+.|-....
T Consensus 64 ~ik~~--k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~ 104 (318)
T COG3980 64 LIKEE--KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENA 104 (318)
T ss_pred ccccc--cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCc
Confidence 33333 89999999987643 4567789999998755433
No 174
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=57.22 E-value=48 Score=29.65 Aligned_cols=23 Identities=39% Similarity=0.452 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
.+++..+...||+||.++++...
T Consensus 46 qr~~YG~L~~g~~v~yvsTe~T~ 68 (235)
T COG2874 46 QRFAYGFLMNGYRVTYVSTELTV 68 (235)
T ss_pred HHHHHHHHhCCceEEEEEechhH
Confidence 35666777899999999998653
No 175
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=56.93 E-value=43 Score=28.29 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=28.5
Q ss_pred HHHHHhCCCCCCcEEEECCCc---------chHHHHHHHcCCCeEEEcCCch
Q 037999 78 FLQLLMSPGLLPTCIISDSIM---------SFTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 78 l~~ll~~~~~~~D~iI~D~~~---------~~~~~~A~~lgIP~v~~~~~~~ 120 (447)
+.+.+++..+.+|+||+|... ....+++..++.|++.+.....
T Consensus 89 i~~~~~~l~~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~ 140 (166)
T TIGR00347 89 LSKHLRTLEQKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKL 140 (166)
T ss_pred HHHHHHHHHhcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCC
Confidence 333443322379999988841 1456789999999988765543
No 176
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=55.22 E-value=26 Score=33.61 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCCCCcEEE-ECCCcchHHHHHHHcCCCeEEEcCC
Q 037999 76 LAFLQLLMSPGLLPTCII-SDSIMSFTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI-~D~~~~~~~~~A~~lgIP~v~~~~~ 118 (447)
..+..+++ +.|++| .|+ +...+|..+|+|.+.++..
T Consensus 243 ~el~ali~----~a~l~I~~DS---Gp~HlAaA~~~P~i~lfG~ 279 (334)
T TIGR02195 243 DEAVDLIA----LAKAVVTNDS---GLMHVAAALNRPLVALYGS 279 (334)
T ss_pred HHHHHHHH----hCCEEEeeCC---HHHHHHHHcCCCEEEEECC
Confidence 34455555 468888 454 4668999999999987653
No 177
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=54.60 E-value=30 Score=33.64 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 037999 2 LTLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~ 21 (447)
..+++.|.+.||+|+++++.
T Consensus 19 ~~l~~~l~~~g~~v~~~~~~ 38 (372)
T cd03792 19 HSLVPLMRDLGVDTRWEVIK 38 (372)
T ss_pred HHHHHHHHHcCCCceEEecC
Confidence 47899999999999999864
No 178
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=53.72 E-value=14 Score=32.21 Aligned_cols=21 Identities=29% Similarity=0.333 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
..||+++..+|++||++..+.
T Consensus 33 ~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 33 AALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp HHHHHHHHHTT-EEEEEE-TT
T ss_pred HHHHHHHHHCCCEEEEEecCc
Confidence 368999999999999999874
No 179
>PLN02470 acetolactate synthase
Probab=53.67 E-value=52 Score=34.49 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=53.9
Q ss_pred EecccccCCH--HHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecc--------cChHHHhc
Q 037999 271 SFGSFIKLGR--EQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSW--------APQEEVLA 340 (447)
Q Consensus 271 s~Gs~~~~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~pq~~lL~ 340 (447)
+|||....+. .-.+.+++.|.+.|++.++-+.+.... .+-+.+.+ .++++.+.- +-...-..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~------~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASM------EIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccH------HHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHH
Confidence 4777664332 335679999999999999987533111 11122211 123333211 11111112
Q ss_pred ccccceeeeccC------hhhHHHHHHhCCceeecC
Q 037999 341 HQAIGGFLTHSG------WNSTLESLVAGVPMICWP 370 (447)
Q Consensus 341 ~~~~~~~ithgG------~~s~~eal~~GvP~l~~P 370 (447)
+...+++++|.| .+.+++|...++|||++.
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 334666999988 458899999999999984
No 180
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=52.43 E-value=65 Score=29.61 Aligned_cols=39 Identities=26% Similarity=0.463 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcch-------HHHHHHHcCCCeEEEc
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSF-------TIDVAEELNIPIITFR 116 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~~ 116 (447)
...+.+++.+. ++++|| |...+. +..+|+++|||++-|-
T Consensus 55 ~~~l~~~l~~~--~i~~vI-DATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 55 EEGLAEFLREN--GIDAVI-DATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred HHHHHHHHHhC--CCcEEE-ECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 45667777665 788877 433333 3456788999999863
No 181
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=52.24 E-value=33 Score=31.78 Aligned_cols=22 Identities=32% Similarity=0.285 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
..|++.|...| +|+++.|....
T Consensus 17 ~aL~~al~~~g-~V~VvAP~~eq 38 (266)
T PRK13934 17 RLLYEFVSPLG-EVDVVAPETPK 38 (266)
T ss_pred HHHHHHHHhCC-cEEEEccCCCC
Confidence 47899998888 79999886643
No 182
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=52.12 E-value=1.4e+02 Score=26.31 Aligned_cols=148 Identities=7% Similarity=0.036 Sum_probs=74.2
Q ss_pred cccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcC-CCeeEecccChH
Q 037999 258 WLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTK-ERGCIVSWAPQE 336 (447)
Q Consensus 258 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pq~ 336 (447)
|++- ..+.++.|..|.++ ...++.|.+.+..+.++- .. +.+.+.+..+ .++.......+.
T Consensus 5 ~l~l-~~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~----------~~~~l~~l~~~~~i~~~~~~~~~ 65 (202)
T PRK06718 5 MIDL-SNKRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE----------LTENLVKLVEEGKIRWKQKEFEP 65 (202)
T ss_pred EEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC----------CCHHHHHHHhCCCEEEEecCCCh
Confidence 4553 35577888777665 344555666676665443 11 1122211111 234444443444
Q ss_pred HHhcccccceeeeccChhhHHHHHH----hCCceeecCccchhhHHHH-----HHHhhcceeeEeC--C--CCCHHHHHH
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLESLV----AGVPMICWPQIGDQQVNSR-----CVSEIWKIGLDMK--D--TCDRSTIEN 403 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~-----~~~~~~g~g~~~~--~--~~~~~~l~~ 403 (447)
.-+..+.+ +|.--+--.+.+.++ .++++-+ .|.+..+. .+ ++-++-+.+. + ..-+..|++
T Consensus 66 ~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~sP~la~~lr~ 138 (202)
T PRK06718 66 SDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGASPKLAKKIRD 138 (202)
T ss_pred hhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCCChHHHHHHHH
Confidence 55666666 777666555555543 4554433 45444432 22 2113333332 1 122355666
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 037999 404 LVRDLMDNKRDKIMESTVQIAKMARDAV 431 (447)
Q Consensus 404 ai~~~l~~~~~~~~~~a~~~~~~~~~~~ 431 (447)
.|.+++...-..+-+.+.++++.+++.+
T Consensus 139 ~ie~~~~~~~~~~~~~~~~~R~~~k~~~ 166 (202)
T PRK06718 139 ELEALYDESYESYIDFLYECRQKIKELQ 166 (202)
T ss_pred HHHHHcchhHHHHHHHHHHHHHHHHHhC
Confidence 6666654333556677777777776653
No 183
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=51.65 E-value=32 Score=29.15 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=27.6
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 037999 267 VLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVI 301 (447)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 301 (447)
.+|+++||.......+++..+++|.+.+.--++..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 49999999998777889999999988775334443
No 184
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=51.51 E-value=24 Score=34.13 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCCCCcEEE-ECCCcchHHHHHHHcCCCeEEEcC
Q 037999 76 LAFLQLLMSPGLLPTCII-SDSIMSFTIDVAEELNIPIITFRP 117 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI-~D~~~~~~~~~A~~lgIP~v~~~~ 117 (447)
..+.++++ +.|++| .|+ ....+|..+|+|.+.++.
T Consensus 253 ~el~ali~----~a~l~I~nDT---Gp~HlAaA~g~P~valfG 288 (348)
T PRK10916 253 EQAVILIA----ACKAIVTNDS---GLMHVAAALNRPLVALYG 288 (348)
T ss_pred HHHHHHHH----hCCEEEecCC---hHHHHHHHhCCCEEEEEC
Confidence 34445555 468888 444 467899999999998765
No 185
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=50.72 E-value=1.4e+02 Score=26.48 Aligned_cols=150 Identities=11% Similarity=0.126 Sum_probs=71.3
Q ss_pred cccCCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhh-cCCCeeEecccChH
Q 037999 258 WLDSQPSRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQG-TKERGCIVSWAPQE 336 (447)
Q Consensus 258 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~ 336 (447)
|++.. .+.++.|..|..+ ..-++.|.+.|..+.++-. + +.+++.+- ...++..+.--.+.
T Consensus 4 ~l~l~-gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~----------~~~~l~~l~~~~~i~~~~~~~~~ 64 (205)
T TIGR01470 4 FANLE-GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E----------LESELTLLAEQGGITWLARCFDA 64 (205)
T ss_pred EEEcC-CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C----------CCHHHHHHHHcCCEEEEeCCCCH
Confidence 44433 4577777777665 3334556667777655432 1 11222110 11355554212223
Q ss_pred HHhcccccceeeeccChhhHHH-----HHHhCCceeec--CccchhhHHHHHHHhhcceeeEeC-C---CCCHHHHHHHH
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLE-----SLVAGVPMICW--PQIGDQQVNSRCVSEIWKIGLDMK-D---TCDRSTIENLV 405 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~e-----al~~GvP~l~~--P~~~DQ~~na~~~~~~~g~g~~~~-~---~~~~~~l~~ai 405 (447)
..|..+.+ +|..-|...+.+ |-..|+|+-++ |-.+|=.. -..+ +.-++-+.+. + ..-...|++.|
T Consensus 65 ~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~-pa~~-~~g~l~iaisT~G~sP~la~~lr~~i 140 (205)
T TIGR01470 65 DILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCSFIF-PSIV-DRSPVVVAISSGGAAPVLARLLRERI 140 (205)
T ss_pred HHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEE-eeEE-EcCCEEEEEECCCCCcHHHHHHHHHH
Confidence 44666666 777766653433 33467777332 32233111 1122 2212333332 1 22345666677
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 406 RDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 406 ~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
.+++.+.-..+-+.+.++++.+++.
T Consensus 141 e~~l~~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 141 ETLLPPSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHhh
Confidence 6666532345556666666666554
No 186
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=50.14 E-value=97 Score=26.29 Aligned_cols=99 Identities=18% Similarity=0.162 Sum_probs=50.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCC--------CCCCCCCCcccHHHHHHhHhhh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDG--------LPPDNPRFGIYIKDWFCSDKPV 73 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~--------l~~~~~~~~~~~~~~~~~~~~~ 73 (447)
-++|.+|.++|++|.=+.-......- .....+....++++ +-++..--.-|... +..
T Consensus 17 ~~~a~~L~~~G~rv~G~vQ~~~~~~~----------~~~~~m~l~dl~~G~~~~IsQ~LG~gs~gCrLD~~~----La~- 81 (159)
T PF10649_consen 17 AAFAARLRARGVRVAGLVQRNTADGD----------GGRCDMDLRDLPSGRRIRISQDLGPGSRGCRLDPGA----LAE- 81 (159)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCC----------CCccceEEEECCCCCEEEEeeccCCCCcccccCHHH----HHH-
Confidence 46899999999999877753211000 01114555555432 22221111112111 111
Q ss_pred hHHHHHHHHhCCCCCCcEEEECCCcc---------hHHHHHHHcCCCeEEEcCC
Q 037999 74 SKLAFLQLLMSPGLLPTCIISDSIMS---------FTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~iI~D~~~~---------~~~~~A~~lgIP~v~~~~~ 118 (447)
....+++-|.+ ++|++|+.-|-- -.+.-|-..|||+++..+.
T Consensus 82 A~~~l~~al~~---~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 82 ASAALRRALAE---GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHHHhc---CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 12333444433 799999998732 1122244579999986554
No 187
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=49.32 E-value=84 Score=30.51 Aligned_cols=98 Identities=8% Similarity=0.071 Sum_probs=54.3
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCCh-hhhh-hcCCCee---------------
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPV-ELEQ-GTKERGC--------------- 328 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--------------- 328 (447)
.+++.+.||-...-+. .++++.|++.++.++|+......+ ...+|. ++.- .++....
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e----~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE----KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc----cccCcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 4777788887754433 456677777789999987544221 011222 1100 0110000
Q ss_pred EecccChHHHhcccccceeeeccChhh---HHHHHHhCCceeec
Q 037999 329 IVSWAPQEEVLAHQAIGGFLTHSGWNS---TLESLVAGVPMICW 369 (447)
Q Consensus 329 ~~~~~pq~~lL~~~~~~~~ithgG~~s---~~eal~~GvP~l~~ 369 (447)
+..+.--..++..-+-..+|++||+-| +..|...|+|.++.
T Consensus 77 ~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 001111123455433344999999986 89999999999873
No 188
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=48.45 E-value=57 Score=31.59 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=46.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchh---hhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHH
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHD---RLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~---~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (447)
+.|++.|.++||++++++...... .+... +++++.++... ..++ . ....+
T Consensus 21 ~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----------~i~~~~~~~~~-------~~~~-~--------~~~~l 73 (374)
T TIGR03088 21 VNLINHLPADRYRHAVVALTEVSAFRKRIQRP-----------DVAFYALHKQP-------GKDV-A--------VYPQL 73 (374)
T ss_pred HHHHhhccccccceEEEEcCCCChhHHHHHhc-----------CceEEEeCCCC-------CCCh-H--------HHHHH
Confidence 578999999999998887432111 11121 67777664210 0111 0 11233
Q ss_pred HHHHhCCCCCCcEEEECCCcc-hHHHHHHHcCCCeEE
Q 037999 79 LQLLMSPGLLPTCIISDSIMS-FTIDVAEELNIPIIT 114 (447)
Q Consensus 79 ~~ll~~~~~~~D~iI~D~~~~-~~~~~A~~lgIP~v~ 114 (447)
..++.+. +||+|-+..... ++..++...++|..+
T Consensus 74 ~~~l~~~--~~Divh~~~~~~~~~~~~~~~~~~~~~i 108 (374)
T TIGR03088 74 YRLLRQL--RPDIVHTRNLAALEAQLPAALAGVPARI 108 (374)
T ss_pred HHHHHHh--CCCEEEEcchhHHHHHHHHHhcCCCeEE
Confidence 4455444 899988654433 334456677888643
No 189
>PLN02316 synthase/transferase
Probab=48.35 E-value=1.2e+02 Score=34.12 Aligned_cols=21 Identities=10% Similarity=0.140 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
-.|+++|+++||+|.++++..
T Consensus 611 ~sLp~ALa~~Gh~V~VitP~Y 631 (1036)
T PLN02316 611 TSLSRAVQDLNHNVDIILPKY 631 (1036)
T ss_pred HHHHHHHHHcCCEEEEEecCC
Confidence 369999999999999999854
No 190
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=47.59 E-value=16 Score=33.44 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=16.5
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.|+++|+++||+|+++++..
T Consensus 24 ~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 24 SLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHTT-EEEEEEE-T
T ss_pred HHHHHHHhcCCeEEEEEccc
Confidence 68999999999999999854
No 191
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=47.31 E-value=81 Score=31.37 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCCCCcEEEECCC------------cchHHHHHHHcCCCeEEEcCCchhHHHH
Q 037999 76 LAFLQLLMSPGLLPTCIISDSI------------MSFTIDVAEELNIPIITFRPYSAHCSWS 125 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~------------~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 125 (447)
..+++++.+..+..|+.|.+-. .....++|+.+|+|+|.+........+.
T Consensus 66 ~~v~~~f~~~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~~s~S~ 127 (451)
T COG1797 66 EGVRALFARAAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASGLSRSV 127 (451)
T ss_pred HHHHHHHHHhcCCCCEEEEeeccccccCCCCCcCCCCHHHHHHHhCCCEEEEEeCcchhHHH
Confidence 4555555543335565554432 2346789999999999988776665443
No 192
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=46.82 E-value=66 Score=33.48 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=52.7
Q ss_pred cChHHHhcccccceeeeccC-h-hhHHHHHHhCCceeecCccc-hhhHHHHH-HHhhcceeeEeCCCCCHHHHHHHHHHH
Q 037999 333 APQEEVLAHQAIGGFLTHSG-W-NSTLESLVAGVPMICWPQIG-DQQVNSRC-VSEIWKIGLDMKDTCDRSTIENLVRDL 408 (447)
Q Consensus 333 ~pq~~lL~~~~~~~~ithgG-~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~-~~~~~g~g~~~~~~~~~~~l~~ai~~~ 408 (447)
+++.+++.-|.++.|-+-== | -|-+||+++|||.|.-=+.+ -++.+-.. -....|+-+.-+...+.++..+.+.+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~ 540 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADF 540 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHH
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 36778888888877766321 3 38999999999999877632 23322110 112235555544556666666666666
Q ss_pred Hh-------HhHHHHHHHHHHHHHH
Q 037999 409 MD-------NKRDKIMESTVQIAKM 426 (447)
Q Consensus 409 l~-------~~~~~~~~~a~~~~~~ 426 (447)
|. ......|.++++++++
T Consensus 541 l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 541 LYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp HHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 53 2234577777777765
No 193
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=46.29 E-value=2.6e+02 Score=29.15 Aligned_cols=52 Identities=25% Similarity=0.384 Sum_probs=31.3
Q ss_pred ccChhh-HHHHH-HhC--Cceeec--Cc-cchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 350 HSGWNS-TLESL-VAG--VPMICW--PQ-IGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 350 hgG~~s-~~eal-~~G--vP~l~~--P~-~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+||.|| +.|.+ .+| +|++.+ |- |-||..-...+.+ -.++++.|.+.|.+.+.
T Consensus 565 ~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~---------~gLd~~~i~~~i~~~l~ 623 (627)
T COG1154 565 DGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAE---------LGLDAEGIARRILEWLK 623 (627)
T ss_pred cccHHHHHHHHHHhcCCCCceEEecCChHhhccCCHHHHHHH---------cCCCHHHHHHHHHHHHh
Confidence 888876 55665 345 555543 33 4455555544433 23678888888877765
No 194
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=46.12 E-value=2.3e+02 Score=26.34 Aligned_cols=117 Identities=18% Similarity=0.188 Sum_probs=62.8
Q ss_pred EEEEEeccccc--CCHHHHHH----HHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCC-Cee-----EecccC
Q 037999 267 VLYVSFGSFIK--LGREQILE----FWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKE-RGC-----IVSWAP 334 (447)
Q Consensus 267 vv~vs~Gs~~~--~~~~~~~~----~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~p 334 (447)
|-++-.|+... ..+++... +.+.+++.|.+|+...+....+ ..-.-+..++.. -+. =.++=|
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~------~~~s~l~~~l~s~~~i~w~~~d~g~NP 237 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPD------TVKSILKNNLNSSPGIVWNNEDTGYNP 237 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcH------HHHHHHHhccccCceeEeCCCCCCCCc
Confidence 33444444432 44444333 4555667888998888643221 000000011111 111 124558
Q ss_pred hHHHhcccccceeeecc-ChhhHHHHHHhCCceeec--Ccc-chhhHH-HHHHHhhcceeeEe
Q 037999 335 QEEVLAHQAIGGFLTHS-GWNSTLESLVAGVPMICW--PQI-GDQQVN-SRCVSEIWKIGLDM 392 (447)
Q Consensus 335 q~~lL~~~~~~~~ithg-G~~s~~eal~~GvP~l~~--P~~-~DQ~~n-a~~~~~~~g~g~~~ 392 (447)
+.+.|+.++. +|.-. ..|...||.+.|+|+-++ |.+ .+.+.- -..+++ .|+..-.
T Consensus 238 Y~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~e-q~~AR~f 297 (329)
T COG3660 238 YIDMLAAADY--IISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVE-QKIARPF 297 (329)
T ss_pred hHHHHhhcce--EEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHH-hhhcccc
Confidence 9999998877 66554 468899999999998763 444 343332 233434 3555544
No 195
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=45.02 E-value=87 Score=27.30 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=26.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP 49 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp 49 (447)
++.||+.|.+.|+++ +++....+.+... |+.+..+.
T Consensus 13 l~~lAk~L~~lGf~I--~AT~GTAk~L~e~-----------GI~v~~V~ 48 (187)
T cd01421 13 LVEFAKELVELGVEI--LSTGGTAKFLKEA-----------GIPVTDVS 48 (187)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHHc-----------CCeEEEhh
Confidence 368999999999998 3555677777766 66666664
No 196
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=44.96 E-value=1e+02 Score=29.47 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=58.9
Q ss_pred CCeEEEEEecccc----cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCee-Eecc--cCh-
Q 037999 264 SRSVLYVSFGSFI----KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGC-IVSW--APQ- 335 (447)
Q Consensus 264 ~~~vv~vs~Gs~~----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~pq- 335 (447)
.++.|.+.-|+.. ..+.+.+.++++.+.+.+.+++.. +.+.. ...-+.+.+..+.++. +.+- +.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e------~~~~~~i~~~~~~~~~~l~g~~sL~el 245 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKD------HPAGNEIEALLPGELRNLAGETSLDEA 245 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhh------HHHHHHHHHhCCcccccCCCCCCHHHH
Confidence 4567888877742 478899999999987767776654 32210 0111122222223322 2232 233
Q ss_pred HHHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 336 EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 336 ~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
..++.++++ ||+.- -|-++=|.+.|+|+|++
T Consensus 246 ~ali~~a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 246 VDLIALAKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 468889888 99875 46677778899999975
No 197
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=44.63 E-value=3e+02 Score=26.65 Aligned_cols=81 Identities=20% Similarity=0.185 Sum_probs=62.4
Q ss_pred CCeeEe-cccCh---HHHhcccccceeeec--cChhhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeC-CCCC
Q 037999 325 ERGCIV-SWAPQ---EEVLAHQAIGGFLTH--SGWNSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCD 397 (447)
Q Consensus 325 ~~~~~~-~~~pq---~~lL~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~~ 397 (447)
+|+.+. +++|- ..+|..|+++.|.+. =|.|++.-.++.|+|++.- .+-+.+- -+.+ .|+=+... +.++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~-~l~~-~~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQ-DLKE-QGIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHH-HHHh-CCCeEEeccccCC
Confidence 577665 78885 569999999887775 5899999999999999864 3444443 3435 37777666 7899
Q ss_pred HHHHHHHHHHHHh
Q 037999 398 RSTIENLVRDLMD 410 (447)
Q Consensus 398 ~~~l~~ai~~~l~ 410 (447)
...|+++=+++..
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998876
No 198
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=44.52 E-value=46 Score=30.17 Aligned_cols=98 Identities=8% Similarity=0.159 Sum_probs=51.9
Q ss_pred CCeEEEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCC-CeeEecccC--h-H
Q 037999 264 SRSVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKE-RGCIVSWAP--Q-E 336 (447)
Q Consensus 264 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p--q-~ 336 (447)
+++.|.+..|+.. ..+.+.+.++++.|.+.+++++...+....+ ...-+.+.+..+. .+.+.+-.+ + .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQE-----KEIADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHH-----HHHHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHH-----HHHHHHHHHhcccceEeecCCCCHHHHH
Confidence 4566777777755 4688999999999988876665544221000 0000011111222 233333333 2 4
Q ss_pred HHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
.++.++++ ||+.-. |.++=|.+.|+|+|++
T Consensus 179 ali~~a~~--~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALISRADL--VIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHTSSE--EEEESS-HHHHHHHHTT--EEEE
T ss_pred HHHhcCCE--EEecCC-hHHHHHHHHhCCEEEE
Confidence 68888888 998754 6788888999999998
No 199
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=44.05 E-value=64 Score=35.28 Aligned_cols=64 Identities=9% Similarity=0.213 Sum_probs=42.5
Q ss_pred HHhcccccceeeec---cChh-hHHHHHHhCCc---eeecCccchhhHHHHHHHhhcc-eeeEeCCCCCHHHHHHHHHHH
Q 037999 337 EVLAHQAIGGFLTH---SGWN-STLESLVAGVP---MICWPQIGDQQVNSRCVSEIWK-IGLDMKDTCDRSTIENLVRDL 408 (447)
Q Consensus 337 ~lL~~~~~~~~ith---gG~~-s~~eal~~GvP---~l~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~~~~l~~ai~~~ 408 (447)
.++..+++ |+.- -|+| +..|++++|+| ++++.-++ -.+.. +| .|+.+ ...+.++++++|.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~----l~~~allV-nP~D~~~lA~AI~~a 440 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQS----LGAGALLV-NPWNITEVSSAIKEA 440 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhh----hcCCeEEE-CCCCHHHHHHHHHHH
Confidence 46677777 6644 4776 67799999999 34433222 11111 23 46666 456899999999999
Q ss_pred Hh
Q 037999 409 MD 410 (447)
Q Consensus 409 l~ 410 (447)
|+
T Consensus 441 L~ 442 (797)
T PLN03063 441 LN 442 (797)
T ss_pred Hh
Confidence 98
No 200
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=43.95 E-value=99 Score=28.34 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcchH-------HHHHHHcCCCeEEE
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSFT-------IDVAEELNIPIITF 115 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~~-------~~~A~~lgIP~v~~ 115 (447)
.+.+.++|++. +.|++| |...+.+ ..+|+..|||++.|
T Consensus 55 ~e~l~~~l~e~--~i~llI-DATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 55 AEGLAAFLREE--GIDLLI-DATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred HHHHHHHHHHc--CCCEEE-ECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 46677888776 677766 4444433 35678899999986
No 201
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=43.91 E-value=1.8e+02 Score=27.54 Aligned_cols=19 Identities=21% Similarity=0.419 Sum_probs=16.6
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
+|.++|.++||+|.++.-.
T Consensus 70 ~L~~~l~~~G~rVaVlAVD 88 (323)
T COG1703 70 ALGRELRERGHRVAVLAVD 88 (323)
T ss_pred HHHHHHHHCCcEEEEEEEC
Confidence 5889999999999999844
No 202
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=43.16 E-value=45 Score=30.98 Aligned_cols=84 Identities=17% Similarity=0.161 Sum_probs=47.4
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
+.+|++.|.++|++|.++.++...+........ .+.-..+.+ .-......+..
T Consensus 142 ~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~------~~~~~~~~~---------------------~~~~~l~e~~~ 194 (279)
T cd03789 142 FAALADRLLARGARVVLTGGPAERELAEEIAAA------LGGPRVVNL---------------------AGKTSLRELAA 194 (279)
T ss_pred HHHHHHHHHHCCCEEEEEechhhHHHHHHHHHh------cCCCccccC---------------------cCCCCHHHHHH
Confidence 367899999999999988776543333221000 000000000 00001233455
Q ss_pred HHhCCCCCCcEEE-ECCCcchHHHHHHHcCCCeEEEcCC
Q 037999 81 LLMSPGLLPTCII-SDSIMSFTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 81 ll~~~~~~~D~iI-~D~~~~~~~~~A~~lgIP~v~~~~~ 118 (447)
+++ +.|++| .|. +...+|..+|+|++.++..
T Consensus 195 li~----~~~l~I~~Ds---g~~HlA~a~~~p~i~l~g~ 226 (279)
T cd03789 195 LLA----RADLVVTNDS---GPMHLAAALGTPTVALFGP 226 (279)
T ss_pred HHH----hCCEEEeeCC---HHHHHHHHcCCCEEEEECC
Confidence 555 468888 454 5678899999999988654
No 203
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=43.14 E-value=84 Score=30.23 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=59.9
Q ss_pred CCeEEEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCC-Cee-Eecc--cCh-
Q 037999 264 SRSVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKE-RGC-IVSW--APQ- 335 (447)
Q Consensus 264 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--~pq- 335 (447)
.++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-+.... +...-..+.+..+. ++. +.+- +.+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~-----e~~~~~~i~~~~~~~~~~~l~g~~sL~el 254 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD-----ELAMVNEIAQGCQTPRVTSLAGKLTLPQL 254 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH-----HHHHHHHHHhhCCCCcccccCCCCCHHHH
Confidence 3456777777754 368899999999998777787765321100 00011111111111 221 2333 334
Q ss_pred HHHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 336 EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 336 ~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
..++.++++ ||+. --|.++=|.+.|+|.|++
T Consensus 255 ~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 255 AALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 468899888 9998 457888888999999986
No 204
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=42.76 E-value=84 Score=29.91 Aligned_cols=131 Identities=14% Similarity=0.041 Sum_probs=72.5
Q ss_pred eEEE-EEecccc--cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecc--cCh-HHHh
Q 037999 266 SVLY-VSFGSFI--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSW--APQ-EEVL 339 (447)
Q Consensus 266 ~vv~-vs~Gs~~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pq-~~lL 339 (447)
+.|. +..||.. ..+.+.+.++++.+.+.+.++++..+.+. +...-+.+.+. ..++.+.+- +.+ ..++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~------e~~~~~~i~~~-~~~~~l~g~~sL~elaali 251 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH------EEQRAKRLAEG-FPYVEVLPKLSLEQVARVL 251 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH------HHHHHHHHHcc-CCcceecCCCCHHHHHHHH
Confidence 4444 4444443 47889999999999777777765443210 00111111111 123333332 334 4688
Q ss_pred cccccceeeeccChhhHHHHHHhCCceeecCccchhhHHH------HHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 340 AHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNS------RCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 340 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na------~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
.++++ ||+... |.++=|.+.|+|.|++=--.|...++ ..+ . -.+..+ ..+++|++.++++++|.
T Consensus 252 ~~a~l--~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~--~~~~cm-~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 252 AGAKA--VVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-R--SPGKSM-ADLSAETVFQKLETLIS 321 (322)
T ss_pred HhCCE--EEecCC-cHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-c--CCCccc-ccCCHHHHHHHHHHHhh
Confidence 99988 999764 67788888999999861111211111 001 0 001111 47888998888887763
No 205
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=42.74 E-value=68 Score=31.02 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=18.0
Q ss_pred HHHHHHHHhC--CCEEEEEeCCc
Q 037999 2 LTLAELFSHA--GFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~r--Gh~VT~~t~~~ 22 (447)
+.+++.|.++ ||+|++++...
T Consensus 21 ~~l~~~L~~~~~g~~v~v~~~~~ 43 (359)
T PRK09922 21 SNVINTFEESKINCEMFFFCRND 43 (359)
T ss_pred HHHHHHhhhcCcceeEEEEecCC
Confidence 5789999999 89999998754
No 206
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=42.69 E-value=98 Score=29.94 Aligned_cols=97 Identities=12% Similarity=0.190 Sum_probs=59.2
Q ss_pred CeEEEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcC-CC-eeEecc--cCh-H
Q 037999 265 RSVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTK-ER-GCIVSW--APQ-E 336 (447)
Q Consensus 265 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~pq-~ 336 (447)
++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-++...+ ...-..+.+... .+ +-+.+- +.+ .
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e-----~~~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDD-----LACVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHH-----HHHHHHHHHhcCCCccccccCCCCHHHHH
Confidence 466778888754 4788999999999987788877654321000 000011111111 12 223343 333 4
Q ss_pred HHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 337 EVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 337 ~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
.++.++++ ||+.- -|-++=|.+.|+|.|++
T Consensus 258 ali~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 258 ALIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 68899888 99975 46677777889999976
No 207
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=42.20 E-value=1.2e+02 Score=26.86 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=22.9
Q ss_pred CCcEEEECCCcc---------hHHHHHHHcCCCeEEEcCC
Q 037999 88 LPTCIISDSIMS---------FTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 88 ~~D~iI~D~~~~---------~~~~~A~~lgIP~v~~~~~ 118 (447)
++|+||+|.... ...+++..++.|++.+...
T Consensus 103 ~~D~viIEg~gg~~~~~~~~~~~adl~~~l~~pvilV~~~ 142 (222)
T PRK00090 103 QYDLVLVEGAGGLLVPLTEDLTLADLAKQLQLPVILVVGV 142 (222)
T ss_pred hCCEEEEECCCceeccCCCCCcHHHHHHHhCCCEEEEECC
Confidence 799999886422 2456888899999887644
No 208
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=41.51 E-value=43 Score=32.26 Aligned_cols=82 Identities=22% Similarity=0.229 Sum_probs=48.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHHH
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQL 81 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (447)
.+|++.|.++|.+|.++.++...+........ +..... + .-......+.++
T Consensus 198 ~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~---------~~~~~~---l-----------------~~k~sL~e~~~l 248 (334)
T COG0859 198 AELAELLIAKGYQVVLFGGPDEEERAEEIAKG---------LPNAVI---L-----------------AGKTSLEELAAL 248 (334)
T ss_pred HHHHHHHHHCCCEEEEecChHHHHHHHHHHHh---------cCCccc---c-----------------CCCCCHHHHHHH
Confidence 57899999999999888887444443322100 000000 0 000112334455
Q ss_pred HhCCCCCCcEEE-ECCCcchHHHHHHHcCCCeEEEcCCc
Q 037999 82 LMSPGLLPTCII-SDSIMSFTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 82 l~~~~~~~D~iI-~D~~~~~~~~~A~~lgIP~v~~~~~~ 119 (447)
+. ..|++| .|+ +...+|..+|.|.|.+...+
T Consensus 249 i~----~a~l~I~~DS---g~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 249 IA----GADLVIGNDS---GPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred Hh----cCCEEEccCC---hHHHHHHHcCCCEEEEECCC
Confidence 54 568877 454 46689999999999986544
No 209
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=40.40 E-value=56 Score=33.00 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=29.8
Q ss_pred HHHHHHhCCCCCCcEEEECCCc------------chHHHHHHHcCCCeEEEcCCch
Q 037999 77 AFLQLLMSPGLLPTCIISDSIM------------SFTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 77 ~l~~ll~~~~~~~D~iI~D~~~------------~~~~~~A~~lgIP~v~~~~~~~ 120 (447)
.+.+.+.+..++.|++|++-.. ....++|+.++.|++.+.....
T Consensus 66 ~i~~~~~~~~~~~D~viVEGagGl~~g~~p~~~~~s~adlAk~l~~pVILV~~~~~ 121 (449)
T TIGR00379 66 QIQECFHRHSKGTDYSIIEGVRGLYDGISAITDYGSTASVAKALDAPIVLVMNCQR 121 (449)
T ss_pred HHHHHHHHhcccCCEEEEecCCccccCCCCCCCCccHHHHHHHhCCCEEEEECCch
Confidence 3444444433378999977652 1256899999999999887654
No 210
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=40.36 E-value=43 Score=24.26 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
+++|..|+++|.+||++....
T Consensus 12 ~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 12 IELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHhCcEEEEEeccc
Confidence 578999999999999998643
No 211
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=40.05 E-value=73 Score=27.04 Aligned_cols=27 Identities=22% Similarity=0.353 Sum_probs=22.3
Q ss_pred cceeeeccC------hhhHHHHHHhCCceeecC
Q 037999 344 IGGFLTHSG------WNSTLESLVAGVPMICWP 370 (447)
Q Consensus 344 ~~~~ithgG------~~s~~eal~~GvP~l~~P 370 (447)
.+++++|+| .+.+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 455888888 458899999999999995
No 212
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=39.50 E-value=89 Score=30.54 Aligned_cols=86 Identities=13% Similarity=0.131 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCC-----hhhhhhcCCC--eeEecccChH---HHhccccccee
Q 037999 278 LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVP-----VELEQGTKER--GCIVSWAPQE---EVLAHQAIGGF 347 (447)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~pq~---~lL~~~~~~~~ 347 (447)
.....+..++++++..+.++...+....... .....++ .+- ....++ +.+.+|+||. .+|-.|++ .|
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~-~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~-Nf 268 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALN-SLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF-NF 268 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHH-HHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc-ce
Confidence 4555678888888887777766654321100 0000000 000 001234 4456999996 48888887 33
Q ss_pred eeccChhhHHHHHHhCCceee
Q 037999 348 LTHSGWNSTLESLVAGVPMIC 368 (447)
Q Consensus 348 ithgG~~s~~eal~~GvP~l~ 368 (447)
|= |==|...|..+|+|+|=
T Consensus 269 VR--GEDSfVRAqwAgkPFvW 287 (374)
T PF10093_consen 269 VR--GEDSFVRAQWAGKPFVW 287 (374)
T ss_pred Ee--cchHHHHHHHhCCCceE
Confidence 33 67799999999999984
No 213
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=39.31 E-value=23 Score=31.21 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=20.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHD 25 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~ 25 (447)
..|++.|.+.||+|+++.+.....
T Consensus 17 ~aL~~~L~~~g~~V~VvAP~~~~S 40 (196)
T PF01975_consen 17 RALAKALSALGHDVVVVAPDSEQS 40 (196)
T ss_dssp HHHHHHHTTTSSEEEEEEESSSTT
T ss_pred HHHHHHHHhcCCeEEEEeCCCCCc
Confidence 468999988899999999977543
No 214
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=39.15 E-value=38 Score=23.92 Aligned_cols=19 Identities=37% Similarity=0.574 Sum_probs=16.1
Q ss_pred HHHHHHHHhCCCEEEEEeC
Q 037999 2 LTLAELFSHAGFRVTFVNT 20 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~ 20 (447)
|..|..|+++|++|+++=.
T Consensus 9 l~aA~~L~~~g~~v~v~E~ 27 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEK 27 (68)
T ss_dssp HHHHHHHHHTTSEEEEEES
T ss_pred HHHHHHHHHCCCcEEEEec
Confidence 4678899999999999954
No 215
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=39.06 E-value=2.1e+02 Score=26.78 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.1
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
+|..+|...||+||+++=.
T Consensus 13 ~L~~~L~~~gh~v~iltR~ 31 (297)
T COG1090 13 ALTARLRKGGHQVTILTRR 31 (297)
T ss_pred HHHHHHHhCCCeEEEEEcC
Confidence 5788888999999999943
No 216
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=38.73 E-value=86 Score=26.64 Aligned_cols=42 Identities=26% Similarity=0.394 Sum_probs=25.9
Q ss_pred hhHHHHHHHHhCCCCCCcEEEECCCcchHHHHH--H-H--c-CCCeEEEc
Q 037999 73 VSKLAFLQLLMSPGLLPTCIISDSIMSFTIDVA--E-E--L-NIPIITFR 116 (447)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A--~-~--l-gIP~v~~~ 116 (447)
...+.+.++|++. +||+||+-..++....++ + + + ++|.+.+.
T Consensus 76 ~~~~~l~~~l~~~--~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvv 123 (169)
T PF06925_consen 76 LFARRLIRLLREF--QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVV 123 (169)
T ss_pred HHHHHHHHHHhhc--CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEE
Confidence 3455677777776 899999887765333122 2 2 3 47766543
No 217
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=38.04 E-value=1.4e+02 Score=28.86 Aligned_cols=96 Identities=10% Similarity=0.075 Sum_probs=58.5
Q ss_pred CCeEEEEEecccc----cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcC----CCe-eEeccc-
Q 037999 264 SRSVLYVSFGSFI----KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTK----ERG-CIVSWA- 333 (447)
Q Consensus 264 ~~~vv~vs~Gs~~----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~- 333 (447)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++. +.+... ..-+.+.+..+ .++ -+.+-.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~------~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDH------EAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhH------HHHHHHHHhcccccccceeeccCCCC
Confidence 4567888888742 478899999999987667776654 321100 11111111111 112 222333
Q ss_pred -Ch-HHHhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 334 -PQ-EEVLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 334 -pq-~~lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
.+ ..++.++++ ||+.- -|-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 33 358899888 99864 46777788899999975
No 218
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=37.78 E-value=31 Score=31.34 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=24.5
Q ss_pred HHHHHHhCCCCCCcEEE-ECCCcchHHHHHHHcCCCeEEEcCCc
Q 037999 77 AFLQLLMSPGLLPTCII-SDSIMSFTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 77 ~l~~ll~~~~~~~D~iI-~D~~~~~~~~~A~~lgIP~v~~~~~~ 119 (447)
.+..++. ..|++| .|. +...+|..+|+|.+.++..+
T Consensus 176 e~~ali~----~a~~~I~~Dt---g~~HlA~a~~~p~v~lfg~t 212 (247)
T PF01075_consen 176 ELAALIS----RADLVIGNDT---GPMHLAAALGTPTVALFGPT 212 (247)
T ss_dssp HHHHHHH----TSSEEEEESS---HHHHHHHHTT--EEEEESSS
T ss_pred HHHHHHh----cCCEEEecCC---hHHHHHHHHhCCEEEEecCC
Confidence 3455555 468888 565 46789999999999987654
No 219
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=37.71 E-value=1.1e+02 Score=31.29 Aligned_cols=84 Identities=10% Similarity=-0.029 Sum_probs=45.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC--CCCCCCC--CCCcccHHHHHHh-HhhhhH
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP--DGLPPDN--PRFGIYIKDWFCS-DKPVSK 75 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp--~~l~~~~--~~~~~~~~~~~~~-~~~~~~ 75 (447)
++.||+.|.+.|+++ ++|....+.+... |+.+..+. .+.|+.- .-.+-+ +..... +.+.-.
T Consensus 13 iv~lAk~L~~lGfeI--iATgGTak~L~e~-----------GI~v~~Vsk~TgfPEil~GRVKTLH-P~IhgGiLarr~~ 78 (511)
T TIGR00355 13 IVEFAQGLVERGVEL--LSTGGTAKLLAEA-----------GVPVTEVSDYTGFPEMMDGRVKTLH-PKVHGGILARRGD 78 (511)
T ss_pred HHHHHHHHHHCCCEE--EEechHHHHHHHC-----------CCeEEEeecccCCchhhCCccccCC-chhhhhhhcCCCc
Confidence 368999999999998 3565677777776 67666665 3455431 011111 111111 111122
Q ss_pred HHHHHHHhCCCCCCcEEEECCCc
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIM 98 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~ 98 (447)
+.++++-+..=.+.|+||++.+-
T Consensus 79 ~~~~~l~~~~I~~IDlVvvNLYP 101 (511)
T TIGR00355 79 DDDADLEEHGIEPIDLVVVNLYP 101 (511)
T ss_pred hHHHHHHHcCCCceeEEEEeccC
Confidence 33333333221278999998753
No 220
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=37.62 E-value=1.5e+02 Score=27.43 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=28.0
Q ss_pred HHHHHHHHhCCCCCCcEEEE-----CCCcc-hHHHHHHHcCCCeEEEcC
Q 037999 75 KLAFLQLLMSPGLLPTCIIS-----DSIMS-FTIDVAEELNIPIITFRP 117 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~-----D~~~~-~~~~~A~~lgIP~v~~~~ 117 (447)
...+.+.++.. ++|+|+. |.-.. -+..+|+.||+|++.+..
T Consensus 100 a~~Laa~~~~~--~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 100 AKALAAAVKKI--GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred HHHHHHHHHhc--CCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 34455555555 7898884 33333 577899999999998643
No 221
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=37.49 E-value=40 Score=34.03 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=28.0
Q ss_pred HHHHHhCCCCCCcEEEECCCc------------chHHHHHHHcCCCeEEEcCCch
Q 037999 78 FLQLLMSPGLLPTCIISDSIM------------SFTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 78 l~~ll~~~~~~~D~iI~D~~~------------~~~~~~A~~lgIP~v~~~~~~~ 120 (447)
+.+.+.+..+++|++|++-.. ....++|+.++.|++.+.....
T Consensus 71 v~~~~~~~~~~~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~~ 125 (451)
T PRK01077 71 VRALFARAAQGADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDASG 125 (451)
T ss_pred HHHHHHHhcccCCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCch
Confidence 333333333368998875431 2356899999999999876543
No 222
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=37.47 E-value=28 Score=35.37 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=17.9
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.|+++|+++||+|+++++..
T Consensus 25 ~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 25 ALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred HHHHHHHHcCCeEEEEecCC
Confidence 68999999999999999743
No 223
>TIGR00313 cobQ cobyric acid synthase CobQ.
Probab=37.02 E-value=1.7e+02 Score=29.77 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=28.0
Q ss_pred HHHHHhCCCCCCcEEEECCCcc-----------hHHHHHHHcCCCeEEEcCCc
Q 037999 78 FLQLLMSPGLLPTCIISDSIMS-----------FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 78 l~~ll~~~~~~~D~iI~D~~~~-----------~~~~~A~~lgIP~v~~~~~~ 119 (447)
+++.+.+...++|++|+|-... ....+|+.++.|++.+....
T Consensus 112 i~~~~~~l~~~~D~vIIEGaGGl~~~~~~~~d~s~~~lA~~l~apVILV~d~~ 164 (475)
T TIGR00313 112 IKESLEILAREYDYVVIEGAGSPAEINLLKRDLANMRIAELANADAILVADID 164 (475)
T ss_pred HHHHHHHHHhcCCEEEEECCCCccccccCcCCchHHHHHHHhCCCEEEEEeCC
Confidence 3333333223799999998653 13578899999999875433
No 224
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=36.49 E-value=2.3e+02 Score=23.91 Aligned_cols=19 Identities=11% Similarity=0.164 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 037999 414 DKIMESTVQIAKMARDAVK 432 (447)
Q Consensus 414 ~~~~~~a~~~~~~~~~~~~ 432 (447)
++++++.+..++..++.+.
T Consensus 131 ~~l~~kl~~~r~~~~~~v~ 149 (156)
T TIGR01162 131 PELAEKLKEYRENQKEEVL 149 (156)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6677777666666665543
No 225
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=36.12 E-value=2.4e+02 Score=28.27 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
..+++++++. ++|++|.+.. ...+|+++|||.+.+
T Consensus 362 ~e~~~~l~~~--~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 362 FDIESYAKEL--KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHHhc--CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 4556666665 7999999874 678999999999864
No 226
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=35.46 E-value=25 Score=28.72 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccC
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGN 30 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~~ 30 (447)
|-|+..|.++||+|++..++.....++.+
T Consensus 17 lYl~~~Lk~~G~~v~Va~npAA~kLl~va 45 (139)
T PF09001_consen 17 LYLSYKLKKKGFEVVVAGNPAALKLLEVA 45 (139)
T ss_dssp HHHHHHHHCTTEEEEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEecCHHHHhHhhhc
Confidence 45788999999999999998766666544
No 227
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=35.43 E-value=87 Score=29.37 Aligned_cols=76 Identities=14% Similarity=0.243 Sum_probs=54.3
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhH
Q 037999 277 KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNST 356 (447)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~ 356 (447)
..+.+..+++.+++.....+.||..+... .-.++.++++...+-.+|+. |+=+.-..++
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~-------------------ga~rlL~~ld~~~~~~~pK~--~iGySDiTaL 103 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGY-------------------GANRLLPYLDYDLIRANPKI--FVGYSDITAL 103 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcC-------------------CHHHhhhhCCHHHHhhCCeE--EEEecHHHHH
Confidence 34567788999999999999999987421 12344556666666677777 8888887777
Q ss_pred HHHHHh--CCceeecCccc
Q 037999 357 LESLVA--GVPMICWPQIG 373 (447)
Q Consensus 357 ~eal~~--GvP~l~~P~~~ 373 (447)
+-+++. |++.+--|+..
T Consensus 104 ~~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 104 HLALYAKTGLVTFHGPMLA 122 (282)
T ss_pred HHHHHHhcCceEEECcccc
Confidence 777753 77777777643
No 228
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=35.40 E-value=2.7e+02 Score=23.37 Aligned_cols=137 Identities=11% Similarity=0.083 Sum_probs=69.4
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhccccccee
Q 037999 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGF 347 (447)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ 347 (447)
|-|-+||.. +....+++...|++.+..+-..+- ..+..|+.+. .++.. +.+...+.|
T Consensus 3 V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~--------saHR~p~~l~----------~~~~~---~~~~~~~vi 59 (150)
T PF00731_consen 3 VAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVA--------SAHRTPERLL----------EFVKE---YEARGADVI 59 (150)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHH----------HHHHH---TTTTTESEE
T ss_pred EEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHH----------HHHHH---hccCCCEEE
Confidence 566677766 567778888889888866544431 1112233211 11111 111122348
Q ss_pred eeccChh----hHHHHHHhCCceeecCccchhhHHH----HHHHhhcceeeEeCCCCCHHHHHHHHHHHHh--HhHHHHH
Q 037999 348 LTHSGWN----STLESLVAGVPMICWPQIGDQQVNS----RCVSEIWKIGLDMKDTCDRSTIENLVRDLMD--NKRDKIM 417 (447)
Q Consensus 348 ithgG~~----s~~eal~~GvP~l~~P~~~DQ~~na----~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~--~~~~~~~ 417 (447)
|.=.|.. ++.-++. -.|+|.+|....+.... ..+.---|+.+..-..=+...-.-..-++|. | ++++
T Consensus 60 Ia~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~~d--~~l~ 136 (150)
T PF00731_consen 60 IAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILALKD--PELR 136 (150)
T ss_dssp EEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHTT---HHHH
T ss_pred EEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhcCC--HHHH
Confidence 8877754 4444443 79999999976644211 1221112555433210033333333445665 5 8899
Q ss_pred HHHHHHHHHHHHH
Q 037999 418 ESTVQIAKMARDA 430 (447)
Q Consensus 418 ~~a~~~~~~~~~~ 430 (447)
++.++.+++.++.
T Consensus 137 ~kl~~~~~~~~~~ 149 (150)
T PF00731_consen 137 EKLRAYREKMKEK 149 (150)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc
Confidence 9998888887764
No 229
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=35.00 E-value=4.4e+02 Score=25.68 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=80.2
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHh---------CCC-cEEEEEecCCCCCCCCCCCCChhhhhhc----CCCeeE
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVN---------SGK-RFLWVIRSDLIDGEPGVGPVPVELEQGT----KERGCI 329 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~---------~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 329 (447)
.++.++||- ..-.+.+.+..+++|+.. .+. .++..+.++ | .+.+.+.+.. =.++.+
T Consensus 253 ~~pallvsS--TswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK-----G---PlkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 253 ERPALLVSS--TSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK-----G---PLKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred CCCeEEEec--CCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC-----C---chhHHHHHHHHHhcccceee
Confidence 445677863 232345566667777651 121 344444332 1 2223222211 145666
Q ss_pred e-cccC---hHHHhcccccceeeeccChh-----hHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHH
Q 037999 330 V-SWAP---QEEVLAHQAIGGFLTHSGWN-----STLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRST 400 (447)
Q Consensus 330 ~-~~~p---q~~lL~~~~~~~~ithgG~~-----s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 400 (447)
. .|+. +-.+|+.+++|..+|-.-.| -+..-.-+|+|++.+-+ ..-..+++.---|... -+.++
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f-----kcl~ELVkh~eNGlvF---~Ds~e 394 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF-----KCLDELVKHGENGLVF---EDSEE 394 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc-----hhHHHHHhcCCCceEe---ccHHH
Confidence 5 8875 45699999998888865443 35555667888777633 2222333432345555 46889
Q ss_pred HHHHHHHHHh------HhHHHHHHHHHHH
Q 037999 401 IENLVRDLMD------NKRDKIMESTVQI 423 (447)
Q Consensus 401 l~~ai~~~l~------~~~~~~~~~a~~~ 423 (447)
+++.+..++. ++-.++|+|+++-
T Consensus 395 La~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 395 LAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 9999988886 2334566666554
No 230
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=34.90 E-value=70 Score=26.47 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=29.4
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 037999 264 SRSVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVI 301 (447)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 301 (447)
...+|++++||......+.++++++.+. .+.+++++.
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~ 86 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVN 86 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEE
Confidence 4568999999999878888888888874 357777765
No 231
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=34.60 E-value=74 Score=31.88 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
..+++.+++. +||++|.+.. ...+|+++|+|.+.+
T Consensus 361 ~el~~~i~~~--~pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 361 WDLESLAKEE--PVDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred HHHHHHhhcc--CCCEEEECch---hHHHHHhcCCCEEEe
Confidence 3445555554 7999999884 568899999999864
No 232
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=34.25 E-value=1.4e+02 Score=28.68 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=58.4
Q ss_pred CeEEEEEec-ccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccC--h-HH
Q 037999 265 RSVLYVSFG-SFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAP--Q-EE 337 (447)
Q Consensus 265 ~~vv~vs~G-s~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--q-~~ 337 (447)
++.|.++.| |.. ..+.+.+.++++.+.+.+.++++..+.. + ....+.+.+..+....+.+-.+ | ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e-----~e~~~~i~~~~~~~~~l~~k~sL~e~~~ 247 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--E-----EERAEEIAKGLPNAVILAGKTSLEELAA 247 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--H-----HHHHHHHHHhcCCccccCCCCCHHHHHH
Confidence 577888888 442 5788999999999999886655544221 0 0111122222222222444433 3 35
Q ss_pred HhcccccceeeeccChhhHHHHHHhCCceeec
Q 037999 338 VLAHQAIGGFLTHSGWNSTLESLVAGVPMICW 369 (447)
Q Consensus 338 lL~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 369 (447)
++.++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 248 li~~a~l--~I~~D-Sg~~HlAaA~~~P~I~i 276 (334)
T COG0859 248 LIAGADL--VIGND-SGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHhcCCE--EEccC-ChHHHHHHHcCCCEEEE
Confidence 6778777 77754 45666677889999986
No 233
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=34.01 E-value=65 Score=31.17 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcCC
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~ 118 (447)
..+..+++ +.|++|..- .+...+|..+|+|.+.++..
T Consensus 254 ~el~ali~----~a~l~v~nD--SGp~HlAaA~g~P~v~lfGp 290 (352)
T PRK10422 254 PELGALID----HAQLFIGVD--SAPAHIAAAVNTPLICLFGA 290 (352)
T ss_pred HHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 34455555 468988442 25678999999999988653
No 234
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.49 E-value=1.3e+02 Score=27.43 Aligned_cols=46 Identities=20% Similarity=0.153 Sum_probs=31.2
Q ss_pred HhHhhhhHHHHHHHHhCCCCCCcEEEECCCcc---hHHHHHHHcCCCeEE
Q 037999 68 CSDKPVSKLAFLQLLMSPGLLPTCIISDSIMS---FTIDVAEELNIPIIT 114 (447)
Q Consensus 68 ~~~~~~~~~~l~~ll~~~~~~~D~iI~D~~~~---~~~~~A~~lgIP~v~ 114 (447)
...+..-...++.++++.+ +.++.+.|.-.. -+..+|.+.|||++.
T Consensus 130 Gs~~tsn~~aM~~~m~~Lk-~r~l~flDs~T~a~S~a~~iAk~~gVp~~~ 178 (250)
T COG2861 130 GSRFTSNEDAMEKLMEALK-ERGLYFLDSGTIANSLAGKIAKEIGVPVIK 178 (250)
T ss_pred hhhhcCcHHHHHHHHHHHH-HCCeEEEcccccccchhhhhHhhcCCceee
Confidence 3344344555666666644 568888888765 345789999999986
No 235
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=33.23 E-value=49 Score=32.57 Aligned_cols=39 Identities=15% Similarity=-0.030 Sum_probs=23.5
Q ss_pred hHHHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEE
Q 037999 74 SKLAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIIT 114 (447)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~ 114 (447)
+...+.+++++. ++|+|++.....+........|+|.+.
T Consensus 92 ~~~~l~~~~~~~--~~D~v~~~~~~~~~~~~~~~~~~p~i~ 130 (397)
T TIGR03087 92 LARWVNALLAAE--PVDAIVVFSSAMAQYVTPHVRGVPRIV 130 (397)
T ss_pred HHHHHHHHHhhC--CCCEEEEeccccceeccccccCCCeEe
Confidence 445555666555 899999876543222212345788876
No 236
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=33.22 E-value=1.4e+02 Score=30.45 Aligned_cols=84 Identities=10% Similarity=-0.009 Sum_probs=45.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC--CCCCCCC-C-CCcccHHHHHHhHhh--hh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP--DGLPPDN-P-RFGIYIKDWFCSDKP--VS 74 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp--~~l~~~~-~-~~~~~~~~~~~~~~~--~~ 74 (447)
++.||+.|.+.|+++ ++|....+.+.+. |+.+..+. .+.|+.- . -.+-+ +.....+.. ..
T Consensus 17 iv~lAk~L~~lGfeI--~AT~GTak~L~e~-----------GI~v~~V~k~TgfpEil~GRVKTLH-P~IhgGiLa~r~~ 82 (513)
T PRK00881 17 IVEFAKALVELGVEI--LSTGGTAKLLAEA-----------GIPVTEVSDVTGFPEILDGRVKTLH-PKIHGGILARRDN 82 (513)
T ss_pred HHHHHHHHHHCCCEE--EEcchHHHHHHHC-----------CCeeEEeecccCCchhcCCccccCC-chhhhhhccCCCC
Confidence 468999999999998 3556677777776 66666664 3444431 0 01111 111111111 12
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCc
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIM 98 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~ 98 (447)
....+++-+..-.+.|+||++..-
T Consensus 83 ~~h~~~l~~~~i~~IDlVvvNLYP 106 (513)
T PRK00881 83 PEHVAALEEHGIEPIDLVVVNLYP 106 (513)
T ss_pred HHHHHHHHHcCCCceeEEEEeCcC
Confidence 334444433322278999988753
No 237
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=32.83 E-value=72 Score=27.23 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=17.4
Q ss_pred hhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 384 EIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 384 ~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+..|+|+.+ |+|+|.++|.+++.+
T Consensus 109 ~~cGVGV~V----T~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 109 KACGVGVVV----TPEQIEAAVEKYIEE 132 (164)
T ss_dssp HTTTTT--------HHHHHHHHHHHHHH
T ss_pred HHcCCCeEE----CHHHHHHHHHHHHHH
Confidence 557899876 899999999999984
No 238
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=32.57 E-value=1.8e+02 Score=29.80 Aligned_cols=159 Identities=15% Similarity=0.121 Sum_probs=88.1
Q ss_pred EEEEecccc--cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChh---hhhhcCCCeeEecccCh-HH--Hh
Q 037999 268 LYVSFGSFI--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVE---LEQGTKERGCIVSWAPQ-EE--VL 339 (447)
Q Consensus 268 v~vs~Gs~~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~pq-~~--lL 339 (447)
-|+.+-|.. ....+.+.+.+..+-+.+.+++..-. |+ ..+... +.++.+.++.+.-|... .. +.
T Consensus 295 pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~-------gd-~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ 366 (487)
T COG0297 295 PLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGT-------GD-PELEEALRALASRHPGRVLVVIGYDEPLAHLIY 366 (487)
T ss_pred cEEEEeeccccccchhHHHHHHHHHHHhCceEEEEec-------Cc-HHHHHHHHHHHHhcCceEEEEeeecHHHHHHHH
Confidence 444544443 23446666666666565666554422 10 012222 23456677777755553 33 44
Q ss_pred cccccceeee-----ccChhhHHHHHHhCCceeecCccc--hhhHHHHH--HHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 340 AHQAIGGFLT-----HSGWNSTLESLVAGVPMICWPQIG--DQQVNSRC--VSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 340 ~~~~~~~~it-----hgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~--~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
+-+++ |+- -||. |-++|+.+|.+-|+.+..+ |-...... ... -|.|..+.. .++++++.++++.+.
T Consensus 367 agaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~-~gtGf~f~~-~~~~~l~~al~rA~~ 441 (487)
T COG0297 367 AGADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQG-VGTGFLFLQ-TNPDHLANALRRALV 441 (487)
T ss_pred hcCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchhccC-ceeEEEEec-CCHHHHHHHHHHHHH
Confidence 44444 654 4776 6788999999888887744 43222111 223 488888854 499999999998775
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 037999 411 NKRDKIMESTVQIAKMARDAVKEGGSSYRNLDK 443 (447)
Q Consensus 411 ~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~ 443 (447)
-|+..-..++...+.++.-.=|-+....+
T Consensus 442 ----~y~~~~~~w~~~~~~~m~~d~sw~~sa~~ 470 (487)
T COG0297 442 ----LYRAPPLLWRKVQPNAMGADFSWDLSAKE 470 (487)
T ss_pred ----HhhCCHHHHHHHHHhhcccccCchhHHHH
Confidence 23333333555555555433444444333
No 239
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=32.56 E-value=2e+02 Score=26.56 Aligned_cols=20 Identities=25% Similarity=0.449 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 037999 2 LTLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~ 21 (447)
+.||..|++.|++|-++-..
T Consensus 122 ~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 122 ANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred HHHHHHHHhcCCeEEEEeCC
Confidence 47899999999999999654
No 240
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=32.53 E-value=30 Score=35.00 Aligned_cols=58 Identities=14% Similarity=0.215 Sum_probs=35.4
Q ss_pred hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHH---HHHHHHHHHHhHhHHHHHHHH
Q 037999 354 NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS---TIENLVRDLMDNKRDKIMEST 420 (447)
Q Consensus 354 ~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~---~l~~ai~~~l~~~~~~~~~~a 420 (447)
-++.||+++|+|+++.=-.+ -+..+ ...-.|..++ .+++ .+++++.++..| ++++.++
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~d--p~~e~~~~~a~~~~kl~~~--p~l~~~~ 440 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLID--PGQEAVAELADALLKLRRD--PELWARM 440 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeC--CchHHHHHHHHHHHHHhcC--HHHHHHH
Confidence 38899999999999872211 11122 1113344443 2444 689999888877 6665444
No 241
>PRK09620 hypothetical protein; Provisional
Probab=32.34 E-value=45 Score=30.22 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
+||++|.++|++|+++...
T Consensus 34 ~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 34 IIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHCCCeEEEEeCC
Confidence 6899999999999999764
No 242
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=31.63 E-value=94 Score=29.89 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEEcC
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITFRP 117 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~ 117 (447)
..+..+++ +.|++|.. ......+|..+|+|.+.++.
T Consensus 252 ~el~ali~----~a~l~Vs~--DSGp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 252 PQLAALID----HARLFIGV--DSVPMHMAAALGTPLVALFG 287 (344)
T ss_pred HHHHHHHH----hCCEEEec--CCHHHHHHHHcCCCEEEEEC
Confidence 44455555 46899944 23567899999999998765
No 243
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=31.45 E-value=1.2e+02 Score=28.53 Aligned_cols=20 Identities=10% Similarity=0.300 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 037999 2 LTLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~ 21 (447)
+.|++.|+++|++|+++..+
T Consensus 14 ~~~~~~l~~~g~~v~~~g~~ 33 (287)
T TIGR02853 14 LELIRKLEELDAKISLIGFD 33 (287)
T ss_pred HHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999876
No 244
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=31.22 E-value=1.9e+02 Score=29.04 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=26.3
Q ss_pred HHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 77 AFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 77 ~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
.+++++++. ++|++|... ....+|+++|||.+-+
T Consensus 364 ~l~~~i~~~--~~dliig~s---~~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 364 DLEDLACAA--GADLLITNS---HGRALAQRLALPLVRA 397 (432)
T ss_pred HHHHHHhhc--CCCEEEECc---chHHHHHHcCCCEEEe
Confidence 445666555 799999877 4678999999999863
No 245
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=31.10 E-value=52 Score=26.36 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
++|.++-++|||+|.++....
T Consensus 21 ~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 21 FALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp HHHHHHHHHTT-EEEEE-GGG
T ss_pred HHHHHHHHHCCCEEEEEEcCc
Confidence 467888899999999998754
No 246
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=30.89 E-value=1.1e+02 Score=33.25 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=50.7
Q ss_pred EecccChHH---Hhcccccceeeec---cCh-hhHHHHHHhCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHH
Q 037999 329 IVSWAPQEE---VLAHQAIGGFLTH---SGW-NSTLESLVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTI 401 (447)
Q Consensus 329 ~~~~~pq~~---lL~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l 401 (447)
+.+++++.+ ++..+++ |+.- -|+ ..+.|++++|+|-.++|+..+----+..+ .-|+.+ ...+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv-~P~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLV-NPNDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEE-CCCCHHHH
Confidence 347788765 5566666 6643 354 47889999977522222222211111112 225655 45679999
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHH
Q 037999 402 ENLVRDLMDNKRDKIMESTVQIAKM 426 (447)
Q Consensus 402 ~~ai~~~l~~~~~~~~~~a~~~~~~ 426 (447)
+++|.+++....++.+++.+++.+.
T Consensus 419 a~ai~~~l~~~~~e~~~r~~~~~~~ 443 (726)
T PRK14501 419 AAAIKRALEMPEEEQRERMQAMQER 443 (726)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999872113334444433333
No 247
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=30.88 E-value=1.7e+02 Score=27.35 Aligned_cols=23 Identities=26% Similarity=0.317 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH 24 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~ 24 (447)
.++|..++++|++|-++++...+
T Consensus 3 ~a~a~~~a~~g~~vllv~~Dp~~ 25 (284)
T TIGR00345 3 CATAIRLAEQGKKVLLVSTDPAH 25 (284)
T ss_pred HHHHHHHHHCCCeEEEEECCCCC
Confidence 36889999999999999986543
No 248
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=30.65 E-value=80 Score=27.54 Aligned_cols=38 Identities=24% Similarity=0.299 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP 49 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp 49 (447)
+|+.+|+++||+||+.....+...- .. ..-|++...+|
T Consensus 25 ~L~~~l~~~g~~v~Vyc~~~~~~~~-~~--------~y~gv~l~~i~ 62 (185)
T PF09314_consen 25 ELAPRLVSKGIDVTVYCRSDYYPYK-EF--------EYNGVRLVYIP 62 (185)
T ss_pred HHHHHHhcCCceEEEEEccCCCCCC-Cc--------ccCCeEEEEeC
Confidence 5788899999999999875443221 11 12277777775
No 249
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=30.51 E-value=50 Score=28.41 Aligned_cols=39 Identities=15% Similarity=0.268 Sum_probs=24.1
Q ss_pred cccccceeeeccChhhHHHHHHhCCceeecCccchhhHHH
Q 037999 340 AHQAIGGFLTHSGWNSTLESLVAGVPMICWPQIGDQQVNS 379 (447)
Q Consensus 340 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na 379 (447)
.+..+..+|++||......... ++|+|-+|..+-=...|
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~a 69 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRA 69 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHH
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHH
Confidence 4455556999999888888876 99999999965333333
No 250
>PRK12342 hypothetical protein; Provisional
Probab=30.34 E-value=93 Score=28.70 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCCCCcEEEECCCcc------hHHHHHHHcCCCeEEEcC
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIMS------FTIDVAEELNIPIITFRP 117 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~~------~~~~~A~~lgIP~v~~~~ 117 (447)
..+.+.++.. .||+|++-.... -+..+|+.||+|++.+..
T Consensus 99 ~~La~~i~~~--~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 99 KALAAAIEKI--GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHHHHHHHh--CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 3444444444 599999644432 377899999999998653
No 251
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=30.29 E-value=1.9e+02 Score=25.23 Aligned_cols=76 Identities=14% Similarity=0.150 Sum_probs=44.1
Q ss_pred ecCccchhhHHHHHHHhhcceeeEeC----C---------CCCHHHHH----HHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 368 CWPQIGDQQVNSRCVSEIWKIGLDMK----D---------TCDRSTIE----NLVRDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 368 ~~P~~~DQ~~na~~~~~~~g~g~~~~----~---------~~~~~~l~----~ai~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
+.|...||...-..+-+..-+|+... + .++.+.++ +-|.++|.| +.+-+|-+++...+.+|
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d--~~IIRnr~KI~Avi~NA 99 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQD--AGIIRHRGKIQAIIGNA 99 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcC--chhHHhHHHHHHHHHHH
Confidence 45567888888766556566776542 1 45666664 556677776 55544444444443332
Q ss_pred ------HhcCCchHHHHHHHH
Q 037999 431 ------VKEGGSSYRNLDKLI 445 (447)
Q Consensus 431 ------~~~~gs~~~~~~~~~ 445 (447)
.+++||=...+=.|+
T Consensus 100 ~~~l~i~~e~gSf~~ylW~fv 120 (187)
T PRK10353 100 RAYLQMEQNGEPFADFVWSFV 120 (187)
T ss_pred HHHHHHHHhcCCHHHHHhhcc
Confidence 245777666664443
No 252
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=30.14 E-value=3.6e+02 Score=27.02 Aligned_cols=34 Identities=21% Similarity=0.415 Sum_probs=25.6
Q ss_pred HHHHHHhCCCCCCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 77 AFLQLLMSPGLLPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 77 ~l~~ll~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
.+++.+++. +||++|.... ...+|+++|||++.+
T Consensus 368 e~~~~i~~~--~pDliiG~s~---~~~~a~~~gip~v~~ 401 (435)
T cd01974 368 HLRSLLFTE--PVDLLIGNTY---GKYIARDTDIPLVRF 401 (435)
T ss_pred HHHHHHhhc--CCCEEEECcc---HHHHHHHhCCCEEEe
Confidence 344555544 7999998773 678999999999864
No 253
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=29.97 E-value=53 Score=29.74 Aligned_cols=19 Identities=47% Similarity=0.628 Sum_probs=16.7
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
+||+.|+++||+|+++..+
T Consensus 31 aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 31 IIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred HHHHHHHhCCCEEEEEECc
Confidence 6899999999999999753
No 254
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=29.53 E-value=1e+02 Score=24.87 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=26.1
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhC--CCcEEEEE
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMVNS--GKRFLWVI 301 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~ 301 (447)
.+++++|||......+.+..+.+.+++. +..+-|.+
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~af 39 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAF 39 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 6899999999874556677788887542 35666665
No 255
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=28.91 E-value=46 Score=31.13 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=30.5
Q ss_pred cChhhHH--HHHHhCCceeecCccchhhHHHHHHHhhccee
Q 037999 351 SGWNSTL--ESLVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (447)
Q Consensus 351 gG~~s~~--eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g 389 (447)
||||+++ -|-.+||-++++-+...|..+++...+..|+.
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 7888654 45566999999999999999997633445887
No 256
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=28.57 E-value=53 Score=30.62 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=20.3
Q ss_pred HHHHHHHhCCCEEEEEeCCcchhhhcc
Q 037999 3 TLAELFSHAGFRVTFVNTEQYHDRLLG 29 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~~~~i~~ 29 (447)
-+|..|++.||+||++.-....+.+..
T Consensus 5 ~~a~~L~~~G~~V~l~~r~~~~~~i~~ 31 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARGEQLEALNQ 31 (293)
T ss_pred HHHHHHHhCCCcEEEEecHHHHHHHHH
Confidence 478899999999999987544444444
No 257
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=28.50 E-value=50 Score=33.49 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
.+||+++..+|++||+++.+.
T Consensus 286 ~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 286 FAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred HHHHHHHHHCCCcEEEEeCCc
Confidence 368999999999999999764
No 258
>PHA02754 hypothetical protein; Provisional
Probab=28.44 E-value=1.3e+02 Score=20.49 Aligned_cols=23 Identities=9% Similarity=0.180 Sum_probs=17.6
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHH
Q 037999 406 RDLMDNKRDKIMESTVQIAKMARDA 430 (447)
Q Consensus 406 ~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (447)
.+++.+ ..+++..+++++.+.++
T Consensus 8 ~k~i~e--K~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 8 PKAIME--KDFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHH--hHHHHHHHHHHHHHhhC
Confidence 344445 78999999999998876
No 259
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=28.26 E-value=57 Score=28.45 Aligned_cols=19 Identities=16% Similarity=0.134 Sum_probs=16.0
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
.|.++...|||+||-++-.
T Consensus 15 ~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 15 RILKEALKRGHEVTAIVRN 33 (211)
T ss_pred HHHHHHHhCCCeeEEEEeC
Confidence 4778889999999999853
No 260
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.06 E-value=43 Score=27.01 Aligned_cols=22 Identities=32% Similarity=0.446 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQY 23 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~ 23 (447)
|-++.+|..+|++||+..++..
T Consensus 22 iYls~klkkkgf~v~VaateAa 43 (148)
T COG4081 22 IYLSHKLKKKGFDVTVAATEAA 43 (148)
T ss_pred HHHHHHhhccCccEEEecCHhh
Confidence 4578899999999999999763
No 261
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.93 E-value=54 Score=26.01 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=16.4
Q ss_pred CHHHHHHHHhCCCEEEEEeC
Q 037999 1 MLTLAELFSHAGFRVTFVNT 20 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~ 20 (447)
++.+|++|+++|++|+..--
T Consensus 25 ~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred HHHHHHHHHHcCCcEEEEec
Confidence 46899999999998877643
No 262
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=27.86 E-value=51 Score=27.69 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
.++|..|+++||+|++.+.+.
T Consensus 12 ~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSCH
T ss_pred HHHHHHHHHcCCEEEEEeccH
Confidence 468999999999999999864
No 263
>PLN02891 IMP cyclohydrolase
Probab=27.72 E-value=1.6e+02 Score=30.13 Aligned_cols=83 Identities=11% Similarity=-0.019 Sum_probs=46.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhccCCCCCCCCCCCCCeeEEeCC--CCCCCCC--CCCcccHHHHHHhHh--hhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNNDVTGFYKRFPNFRFTSIP--DGLPPDN--PRFGIYIKDWFCSDK--PVS 74 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i~~~~~~~~~~~~~~~i~f~~lp--~~l~~~~--~~~~~~~~~~~~~~~--~~~ 74 (447)
++.+|+.|.+.|.+ +++|......+... ||....+. .+.|+.. .-.+-+ +.....+. +..
T Consensus 35 i~~fAk~L~~~gve--IiSTgGTak~L~e~-----------Gi~v~~Vsd~TgfPEiL~GRVKTLH-PkIhgGILa~r~~ 100 (547)
T PLN02891 35 LALLANGLQELGYT--IVSTGGTASALEAA-----------GVSVTKVEELTNFPEMLDGRVKTLH-PAVHGGILARRDQ 100 (547)
T ss_pred HHHHHHHHHHCCCE--EEEcchHHHHHHHc-----------CCceeeHHhccCCchhhCCcccccC-chhhhhhhcCCCC
Confidence 36899999998765 56777777777776 77777776 3555531 011111 12221211 112
Q ss_pred HHHHHHHHhCCCCCCcEEEECCC
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSI 97 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~ 97 (447)
...++++-+..-.+.|+||++.+
T Consensus 101 ~~h~~~l~~~~I~~IDlVvVNLY 123 (547)
T PLN02891 101 EHHMEALNEHGIGTIDVVVVNLY 123 (547)
T ss_pred HHHHHHHHHcCCCceeeEEEecc
Confidence 33444443332237899998875
No 264
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=27.57 E-value=98 Score=28.69 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=23.9
Q ss_pred eEEEEEecccccCCHH-HHHHHHHHHHhC--CCcEEEEEec
Q 037999 266 SVLYVSFGSFIKLGRE-QILEFWHGMVNS--GKRFLWVIRS 303 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~-~~~~~~~~l~~~--~~~~i~~~~~ 303 (447)
.+++|||||......+ .+..+.+.+++. +..+-|.+.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 5799999998865444 677777777663 6889998754
No 265
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=27.47 E-value=41 Score=33.14 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=22.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhh
Q 037999 1 MLTLAELFSHAGFRVTFVNTEQYHDRL 27 (447)
Q Consensus 1 ~l~La~~La~rGh~VT~~t~~~~~~~i 27 (447)
+|+++..|+++| .|-+++.++....+
T Consensus 110 LLQva~~lA~~~-~vLYVsGEES~~Qi 135 (456)
T COG1066 110 LLQVAARLAKRG-KVLYVSGEESLQQI 135 (456)
T ss_pred HHHHHHHHHhcC-cEEEEeCCcCHHHH
Confidence 478999999999 99999998876654
No 266
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=27.46 E-value=3.6e+02 Score=26.69 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=37.3
Q ss_pred eeeccChhhHHHHHHhCCceee--cCccchh------hHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHhH
Q 037999 347 FLTHSGWNSTLESLVAGVPMIC--WPQIGDQ------QVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (447)
Q Consensus 347 ~ithgG~~s~~eal~~GvP~l~--~P~~~DQ------~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~~ 411 (447)
+-|+ |..+...|+.+|.|+-. ++-++|- -.|+.+++..+-..+. .++.+++..+|.++++|
T Consensus 248 VEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vv---vV~~~ei~aaI~~l~ed 316 (457)
T KOG1250|consen 248 VETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRVV---VVEDDEIAAAILRLFED 316 (457)
T ss_pred Eeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceEE---EeccHHHHHHHHHHHHh
Confidence 4555 46788888888888653 2223431 2234344333222332 37889999999999986
No 267
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=27.29 E-value=1e+02 Score=28.45 Aligned_cols=40 Identities=23% Similarity=0.082 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCCCCcEEEECCC-----cc-hHHHHHHHcCCCeEEEcC
Q 037999 76 LAFLQLLMSPGLLPTCIISDSI-----MS-FTIDVAEELNIPIITFRP 117 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~-----~~-~~~~~A~~lgIP~v~~~~ 117 (447)
..+.+.+++. .||+|+.-.. .. -+..+|+.||+|++.+..
T Consensus 102 ~~La~ai~~~--~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 102 SALAAAAQKA--GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHHHHHh--CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 3444455444 6999996433 22 466799999999998654
No 268
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=27.19 E-value=63 Score=28.45 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHD 25 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~ 25 (447)
+.|+++|.++||+|+++.++...+
T Consensus 23 ~~lir~L~k~G~~V~vv~T~aA~~ 46 (196)
T PRK08305 23 MPEIEKLVDEGAEVTPIVSYTVQT 46 (196)
T ss_pred HHHHHHHHhCcCEEEEEECHhHHH
Confidence 578999999999999999976443
No 269
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=27.01 E-value=70 Score=27.33 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 037999 2 LTLAELFSHAGFRVTFVN 19 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t 19 (447)
+.+|+.|+++|++|+++.
T Consensus 42 l~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 42 LVAARHLANRGYNVTVYL 59 (169)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 568999999999999954
No 270
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=26.77 E-value=3.2e+02 Score=21.56 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=47.8
Q ss_pred CHHHHHHHHhC--CCEEEEEeCCcchhhhcc-CCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHH
Q 037999 1 MLTLAELFSHA--GFRVTFVNTEQYHDRLLG-NNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLA 77 (447)
Q Consensus 1 ~l~La~~La~r--Gh~VT~~t~~~~~~~i~~-~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (447)
++.+++.|.+- |+++. +++.....+.+ . |+....+. .-+.+ -.+.
T Consensus 14 ~~~~a~~~~~ll~Gf~i~--AT~gTa~~L~~~~-----------Gi~v~~vk-~~~~~------------------g~~~ 61 (115)
T cd01422 14 LVEFVKQHQELLSRHRLV--ATGTTGLLIQEAT-----------GLTVNRMK-SGPLG------------------GDQQ 61 (115)
T ss_pred HHHHHHHHHHHhcCCEEE--EechHHHHHHHhh-----------CCcEEEEe-cCCCC------------------chhH
Confidence 46889999999 99983 55556666665 4 55544441 11111 1244
Q ss_pred HHHHHhCCCCCCcEEEECCC--cc-h----H---HHHHHHcCCCeEEE
Q 037999 78 FLQLLMSPGLLPTCIISDSI--MS-F----T---IDVAEELNIPIITF 115 (447)
Q Consensus 78 l~~ll~~~~~~~D~iI~D~~--~~-~----~---~~~A~~lgIP~v~~ 115 (447)
+.+++.+. ++|+||.-.- .. . + ...|-..+||++.-
T Consensus 62 i~~~i~~g--~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~Tt 107 (115)
T cd01422 62 IGALIAEG--EIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLATN 107 (115)
T ss_pred HHHHHHcC--ceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEEc
Confidence 55555544 7888885432 11 1 2 23578899999873
No 271
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=26.75 E-value=3e+02 Score=28.87 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=23.0
Q ss_pred ccceeeeccC------hhhHHHHHHhCCceeecC
Q 037999 343 AIGGFLTHSG------WNSTLESLVAGVPMICWP 370 (447)
Q Consensus 343 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 370 (447)
+.+++++|.| .+.+++|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3556999988 457889999999999995
No 272
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=26.70 E-value=61 Score=30.08 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=16.4
Q ss_pred HHHHHHHhCCCEEEEEeC
Q 037999 3 TLAELFSHAGFRVTFVNT 20 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~ 20 (447)
++|+.|+++||+|.++.=
T Consensus 21 ~~A~~lA~~g~~liLvaR 38 (265)
T COG0300 21 ELAKQLARRGYNLILVAR 38 (265)
T ss_pred HHHHHHHHCCCEEEEEeC
Confidence 689999999999999974
No 273
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=26.48 E-value=1.3e+02 Score=28.62 Aligned_cols=76 Identities=11% Similarity=0.102 Sum_probs=53.4
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHHHhcccccceeeeccChhhH
Q 037999 277 KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNST 356 (447)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ithgG~~s~ 356 (447)
..+.+..+++.+++.....+.||.+++.. .-.++.++++...+-.||++ ||=..-..++
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------------g~~rlL~~lD~~~i~~~PK~--fiGySDiTaL 107 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD-------------------DSNELLPYLDYELIKKNPKI--FIGYSDITAL 107 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc-------------------CHhhhhhhcCHHHHhhCCCE--EEeccHHHHH
Confidence 34557788899999998899999986421 12345566666666677776 8877777777
Q ss_pred HHHHH--hCCceeecCccc
Q 037999 357 LESLV--AGVPMICWPQIG 373 (447)
Q Consensus 357 ~eal~--~GvP~l~~P~~~ 373 (447)
+-+++ +|++.+--|+..
T Consensus 108 ~~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 108 HLAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHHHhcCCeEEECcccc
Confidence 77773 377777777654
No 274
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=26.45 E-value=1.6e+02 Score=25.17 Aligned_cols=30 Identities=10% Similarity=0.202 Sum_probs=22.2
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCC
Q 037999 265 RSVLYVSFGSFIKLGREQILEFWHGMVNSG 294 (447)
Q Consensus 265 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~ 294 (447)
.-.+|+++||......+.+...++.|...+
T Consensus 7 ~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 7 SALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 346899999998656666777777776643
No 275
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=25.99 E-value=4e+02 Score=25.84 Aligned_cols=62 Identities=13% Similarity=0.048 Sum_probs=43.3
Q ss_pred cccChHHHhcccccceeee------ccChhhHHHHHHhCCceee-cCccchhhHHHHHHHhhcceeeEe
Q 037999 331 SWAPQEEVLAHQAIGGFLT------HSGWNSTLESLVAGVPMIC-WPQIGDQQVNSRCVSEIWKIGLDM 392 (447)
Q Consensus 331 ~~~pq~~lL~~~~~~~~it------hgG~~s~~eal~~GvP~l~-~P~~~DQ~~na~~~~~~~g~g~~~ 392 (447)
-|....+++...++.++.+ +-+.--+.+++.+|+.+++ =|+..++-.-...++++.|+=..+
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v 120 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV 120 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4677788888888877774 2345678889999999999 788755555555555544554444
No 276
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=25.97 E-value=4e+02 Score=26.08 Aligned_cols=19 Identities=16% Similarity=0.572 Sum_probs=16.0
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 037999 3 TLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~ 21 (447)
.+|+.|.++||+|+++...
T Consensus 113 slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 113 LFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred HHHHHHHHCCCeEEEeCCC
Confidence 4789999999999999753
No 277
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=25.95 E-value=3.1e+02 Score=23.35 Aligned_cols=88 Identities=14% Similarity=0.210 Sum_probs=51.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch-hhhccCCCCCCCCCCCCCeeEEeCCCCCCCCCCCCcccHHHHHHhHhhhhHHHHHH
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYH-DRLLGNNDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFLQ 80 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~-~~i~~~~~~~~~~~~~~~i~f~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (447)
-.|.+...++|.+|.|+.+..-. +.+... -....|+++++...++.- ...-.+.+.+
T Consensus 38 ~~l~~~~~~~~~~ifllG~~~~~~~~~~~~-----l~~~yP~l~ivg~~~g~f-----------------~~~~~~~i~~ 95 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGGSEEVLEKAAAN-----LRRRYPGLRIVGYHHGYF-----------------DEEEEEAIIN 95 (172)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHHHH-----HHHHCCCeEEEEecCCCC-----------------ChhhHHHHHH
Confidence 35667777889999999875432 211111 012356788776543321 0111233334
Q ss_pred HHhCCCCCCcEEEECCCcc----hHHHHHHHcCCCeE
Q 037999 81 LLMSPGLLPTCIISDSIMS----FTIDVAEELNIPII 113 (447)
Q Consensus 81 ll~~~~~~~D~iI~D~~~~----~~~~~A~~lgIP~v 113 (447)
.+++. ++|+|++-.-++ |.....+.++.+++
T Consensus 96 ~I~~~--~pdiv~vglG~PkQE~~~~~~~~~l~~~v~ 130 (172)
T PF03808_consen 96 RINAS--GPDIVFVGLGAPKQERWIARHRQRLPAGVI 130 (172)
T ss_pred HHHHc--CCCEEEEECCCCHHHHHHHHHHHHCCCCEE
Confidence 44444 899999888776 67777778888833
No 278
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=25.92 E-value=3e+02 Score=23.14 Aligned_cols=27 Identities=22% Similarity=0.398 Sum_probs=21.2
Q ss_pred cceeeeccC------hhhHHHHHHhCCceeecC
Q 037999 344 IGGFLTHSG------WNSTLESLVAGVPMICWP 370 (447)
Q Consensus 344 ~~~~ithgG------~~s~~eal~~GvP~l~~P 370 (447)
.+.+++|.| .+.+.+|...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 444777766 457889999999999995
No 279
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=25.73 E-value=45 Score=26.39 Aligned_cols=48 Identities=8% Similarity=0.165 Sum_probs=36.4
Q ss_pred HHhCCceeecCccchhhHHHHHHHhhcceeeEeC------------C---CCCHHHHHHHHHHHH
Q 037999 360 LVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK------------D---TCDRSTIENLVRDLM 409 (447)
Q Consensus 360 l~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~------------~---~~~~~~l~~ai~~~l 409 (447)
++|+-++.+.|..+|.-.|+-|+.+ |.-..++ + ..+.|+++.+|+-+.
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq--G~dtL~~hai~GfnAMPpkG~ca~cSdDe~kAaId~M~ 122 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ--GKDTLLDHAINGFNAMPPKGGCADCSDDEVKAAIDFMA 122 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh--chHHHHHHHhccccCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 5688899999999999999999965 5443332 1 467899998887553
No 280
>PF15278 Sec3_C_2: Sec3 exocyst complex subunit
Probab=25.60 E-value=2.6e+02 Score=20.14 Aligned_cols=29 Identities=3% Similarity=0.068 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 037999 398 RSTIENLVRDLMDNKRDKIMESTVQIAKM 426 (447)
Q Consensus 398 ~~~l~~ai~~~l~~~~~~~~~~a~~~~~~ 426 (447)
.+.+.+..++.+..-.++|+++++.+.+.
T Consensus 12 ~~~~~~~~~~~~~S~~~s~~~~VE~L~~~ 40 (86)
T PF15278_consen 12 EDTFKDNQQQTEFSFNESMISNVENLFRQ 40 (86)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45666666666652127888888777655
No 281
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=25.51 E-value=74 Score=28.32 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.5
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.||++|++.||+|++.+...
T Consensus 15 alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 15 ALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred HHHHHHHhCCCeEEEecCCC
Confidence 68999999999999997644
No 282
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=25.50 E-value=2.8e+02 Score=27.65 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.1
Q ss_pred CCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 88 LPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 88 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
+||++|... .+..+|+++|||.+-+
T Consensus 350 ~pDl~Ig~s---~~~~~a~~~giP~~r~ 374 (416)
T cd01980 350 RPDLAIGTT---PLVQYAKEKGIPALYY 374 (416)
T ss_pred CCCEEEeCC---hhhHHHHHhCCCEEEe
Confidence 899999874 3677999999999864
No 283
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=25.49 E-value=3.6e+02 Score=25.91 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCEEEEEeCCcchh
Q 037999 3 TLAELFSHAGFRVTFVNTEQYHD 25 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~~~ 25 (447)
++|-.|++.|..|-+++++..+.
T Consensus 21 A~A~~lA~~g~kvLlvStDPAhs 43 (322)
T COG0003 21 ATAVKLAESGKKVLLVSTDPAHS 43 (322)
T ss_pred HHHHHHHHcCCcEEEEEeCCCCc
Confidence 46788999999888887765443
No 284
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.46 E-value=1.3e+02 Score=28.62 Aligned_cols=50 Identities=10% Similarity=0.206 Sum_probs=34.9
Q ss_pred ceeeeccChhhHHHHHHh----CCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 345 GGFLTHSGWNSTLESLVA----GVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 345 ~~~ithgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
..+|+=||=||++.+... ++|++++-.. .+|.. -.++.+++.+++.+++.
T Consensus 70 Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFL--t~~~~~~~~~~l~~l~~ 123 (305)
T PRK02649 70 KFAIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFL--TEAYLNQLDEAIDQVLA 123 (305)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCccc--ccCCHHHHHHHHHHHHc
Confidence 349999999999999764 7898887320 12211 24567777788877775
No 285
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=25.35 E-value=1.5e+02 Score=28.56 Aligned_cols=40 Identities=23% Similarity=0.374 Sum_probs=27.6
Q ss_pred hHHHHHHHHhCCCCCCcEEEECCCcch-------H---HHHHHHcCCCeEEE
Q 037999 74 SKLAFLQLLMSPGLLPTCIISDSIMSF-------T---IDVAEELNIPIITF 115 (447)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~iI~D~~~~~-------~---~~~A~~lgIP~v~~ 115 (447)
....+.+++++. +||++|+-+.+.. + ..+.++++||.+.-
T Consensus 68 a~~~i~~mv~~~--~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 68 ALKKILEMVKKL--KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHHHHhc--CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 345556666666 8999999887642 2 23456899999864
No 286
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=25.07 E-value=44 Score=29.92 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=24.7
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCch
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 120 (447)
.+||+| .|..-. -+..=|.+++||.|.+.-.-+
T Consensus 173 ~~D~vvvln~~e~~sAilEA~K~~IPTIgIVDtN~ 207 (251)
T KOG0832|consen 173 TPDLVVVLNPEENHSAILEAAKMAIPTIGIVDTNC 207 (251)
T ss_pred CcceeEecCcccccHHHHHHHHhCCCeEEEecCCC
Confidence 568766 677765 667779999999998765544
No 287
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=24.90 E-value=1.9e+02 Score=26.58 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=18.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQY 23 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~ 23 (447)
..+|..++++|++|-++.....
T Consensus 18 ~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 18 AATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred HHHHHHHHHCCCCceEEeCCCc
Confidence 4688999999999999987654
No 288
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=24.88 E-value=2e+02 Score=25.21 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=22.4
Q ss_pred CCcEEE-ECCCc-chHHHHHHHcCCCeEEEc
Q 037999 88 LPTCII-SDSIM-SFTIDVAEELNIPIITFR 116 (447)
Q Consensus 88 ~~D~iI-~D~~~-~~~~~~A~~lgIP~v~~~ 116 (447)
++|+|+ .+.-. +.|..+|..+|+|++...
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vR 80 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAK 80 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 789998 44433 377889999999999864
No 289
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.47 E-value=1.3e+02 Score=27.85 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=33.6
Q ss_pred ceeeeccChhhHHHHHH------hCCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 345 GGFLTHSGWNSTLESLV------AGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 345 ~~~ithgG~~s~~eal~------~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
..+|+-||=||++.++. .++|++++-.. .+|.. .+++.+++.+++.++++
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL--~~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFY--TDWRPFEVDKLVIALAK 92 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceec--ccCCHHHHHHHHHHHHc
Confidence 34999999999999986 47898887320 12222 23456666667766665
No 290
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=24.18 E-value=74 Score=28.74 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=25.0
Q ss_pred CCCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCch
Q 037999 87 LLPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 87 ~~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 120 (447)
..||+|| .|...- .+..=|.++|||.+.+.-+.+
T Consensus 154 ~~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~ 189 (225)
T TIGR01011 154 KLPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNC 189 (225)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCC
Confidence 3689766 677644 677778999999999765443
No 291
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=24.18 E-value=66 Score=28.32 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=24.1
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCc
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 119 (447)
.||+|| +|+..- -+..=|.++|||.+.+.-+-
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 578766 777654 67778999999999875543
No 292
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=24.17 E-value=69 Score=26.40 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=19.8
Q ss_pred HHHHHHHhCCCEEEEEeCCcchhhhc
Q 037999 3 TLAELFSHAGFRVTFVNTEQYHDRLL 28 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~~~~~i~ 28 (447)
-+|-.|++.||+|++++.....+.+.
T Consensus 12 ~~a~~L~~~g~~V~l~~r~~~~~~~~ 37 (151)
T PF02558_consen 12 LYAARLAQAGHDVTLVSRSPRLEAIK 37 (151)
T ss_dssp HHHHHHHHTTCEEEEEESHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEEccccHHhhh
Confidence 36889999999999999876333333
No 293
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=24.02 E-value=67 Score=28.48 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=24.1
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCc
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 119 (447)
.||+|| +|+..- -+..=|.++|||.+.+.-+-
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 578766 777654 66677899999999986543
No 294
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=23.98 E-value=91 Score=27.06 Aligned_cols=26 Identities=23% Similarity=0.433 Sum_probs=21.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhh
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRL 27 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i 27 (447)
..|.+.|.++|++|.++.|+...+.+
T Consensus 16 ~~lir~L~~~g~~V~vv~T~~A~~fv 41 (181)
T TIGR00421 16 IRLLEVLKEAGVEVHLVISDWAKETI 41 (181)
T ss_pred HHHHHHHHHCCCEEEEEECccHHHHH
Confidence 46899999999999999997655444
No 295
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=23.81 E-value=1.9e+02 Score=29.47 Aligned_cols=51 Identities=10% Similarity=0.016 Sum_probs=28.4
Q ss_pred cHHHHHHhHhhhhHHHHHHHHhCCCCCCcEEEECCCcc--hHHHHHHHcCCCeEEE
Q 037999 62 YIKDWFCSDKPVSKLAFLQLLMSPGLLPTCIISDSIMS--FTIDVAEELNIPIITF 115 (447)
Q Consensus 62 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~ 115 (447)
++..++..+..... ..++++.+.+||+|+...... .|..+++++|||.+..
T Consensus 378 ~lWPyLe~fa~d~~---~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~i 430 (550)
T PF00862_consen 378 DLWPYLEEFADDAE---REILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFI 430 (550)
T ss_dssp G-GGGHHHHHHHHH---HHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE
T ss_pred hchhhHHHHHHHHH---HHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehh
Confidence 44455555543322 333333223899999766543 5667899999998864
No 296
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=23.81 E-value=62 Score=26.82 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=27.9
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHH-----hCCCcEEEEEec
Q 037999 266 SVLYVSFGSFIKLGREQILEFWHGMV-----NSGKRFLWVIRS 303 (447)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~-----~~~~~~i~~~~~ 303 (447)
.||+|+.|+-.......+..++.... .....|+|+++.
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~ 45 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRD 45 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCc
Confidence 58999999988766677777777765 224689999974
No 297
>CHL00067 rps2 ribosomal protein S2
Probab=23.76 E-value=76 Score=28.78 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=24.9
Q ss_pred CCCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCch
Q 037999 87 LLPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 87 ~~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 120 (447)
..||+|| .|+..- .+..=|.++|||++.+.-+.+
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~ 195 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILDTNC 195 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCC
Confidence 3688776 666554 677778999999999765443
No 298
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=23.60 E-value=2e+02 Score=25.38 Aligned_cols=27 Identities=30% Similarity=0.691 Sum_probs=20.9
Q ss_pred CcEEEECCCcchH-------HHHHHHcCCCeEEE
Q 037999 89 PTCIISDSIMSFT-------IDVAEELNIPIITF 115 (447)
Q Consensus 89 ~D~iI~D~~~~~~-------~~~A~~lgIP~v~~ 115 (447)
.|||++|-..++. ..+|..+|||++.+
T Consensus 83 ~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 83 VDCVLIDEAQFFDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred cCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEEe
Confidence 6899999876543 35788899999984
No 299
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=23.60 E-value=73 Score=29.44 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=24.6
Q ss_pred CCCcEEE-ECCCcc-hHHHHHHHcCCCeEEEcCCc
Q 037999 87 LLPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 87 ~~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 119 (447)
..||+|| .|...- .+..=|.++|||++.+.-+.
T Consensus 156 ~~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn 190 (258)
T PRK05299 156 GLPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTN 190 (258)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCC
Confidence 3689776 677654 66777899999999976543
No 300
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=23.52 E-value=1e+02 Score=25.49 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=21.8
Q ss_pred cceeeeccC------hhhHHHHHHhCCceeecCc
Q 037999 344 IGGFLTHSG------WNSTLESLVAGVPMICWPQ 371 (447)
Q Consensus 344 ~~~~ithgG------~~s~~eal~~GvP~l~~P~ 371 (447)
.+.+++|+| .+.+.+|...++|+|++.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 344888866 4578889999999999854
No 301
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=23.30 E-value=54 Score=31.17 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 037999 2 LTLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~ 21 (447)
..|++.|.++||+|++++..
T Consensus 19 ~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 19 VDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred HHHHHhcccCCceEEEEEEe
Confidence 57899999999999999853
No 302
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=23.17 E-value=2e+02 Score=25.03 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCCCCcEEEECCCc-chHHHHHHHcCCCeEEEcCCch
Q 037999 76 LAFLQLLMSPGLLPTCIISDSIM-SFTIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~D~~~-~~~~~~A~~lgIP~v~~~~~~~ 120 (447)
..+.+++++......++|-.++- +++..+|+++|+|.|.+.|+-.
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~ 92 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAVR 92 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 34456666542222466655554 3778899999999988866543
No 303
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=22.94 E-value=65 Score=29.70 Aligned_cols=28 Identities=18% Similarity=0.388 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQYHDRLLG 29 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~~~~~i~~ 29 (447)
.++|.+|..+|++|+|++.+.....+..
T Consensus 123 ~Ai~~~l~~~g~sv~f~~~~el~~~Lk~ 150 (254)
T COG1484 123 IAIGNELLKAGISVLFITAPDLLSKLKA 150 (254)
T ss_pred HHHHHHHHHcCCeEEEEEHHHHHHHHHH
Confidence 5788999988999999999876655544
No 304
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=22.92 E-value=3.9e+02 Score=26.75 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=20.9
Q ss_pred CCcEEEECCCcchHHHHHHHcCCCeEEE
Q 037999 88 LPTCIISDSIMSFTIDVAEELNIPIITF 115 (447)
Q Consensus 88 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 115 (447)
++|++|.... +..+|+++|||.+-+
T Consensus 355 ~pDllig~s~---~~~~A~k~gIP~vr~ 379 (422)
T TIGR02015 355 EPDLAIGTTP---LVQFAKEHGIPALYF 379 (422)
T ss_pred CCCEEEcCCc---chHHHHHcCCCEEEe
Confidence 8999998753 567899999999874
No 305
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=22.59 E-value=2e+02 Score=29.94 Aligned_cols=89 Identities=17% Similarity=0.147 Sum_probs=48.5
Q ss_pred cccccCCH-HHHHHHHHHHHhCCCcEEEEEecCCCCCCCCCCCCChhhhhhcCCCeeEecccChHH--H-------hccc
Q 037999 273 GSFIKLGR-EQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELEQGTKERGCIVSWAPQEE--V-------LAHQ 342 (447)
Q Consensus 273 Gs~~~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~--l-------L~~~ 342 (447)
||...... .-.+.+++.|.+.|++.+.-+.+.... .+-+.+.+ .++++.+. ..|+. . ..+.
T Consensus 5 ~~~~~~~~~~~~~~l~~~L~~~GV~~vFgvpG~~~~------~l~dal~~--~~~i~~i~-~~hE~~A~~~Adgyar~tg 75 (564)
T PRK08155 5 GTTSTRKRFTGAELIVRLLERQGIRIVTGIPGGAIL------PLYDALSQ--STQIRHIL-ARHEQGAGFIAQGMARTTG 75 (564)
T ss_pred CCCccCCcccHHHHHHHHHHHcCCCEEEeCCCcccH------HHHHHHhc--cCCceEEE-eccHHHHHHHHHHHHHHcC
Confidence 44443332 346678888888898888877532110 11122211 12333322 11111 1 1122
Q ss_pred ccceeeeccC------hhhHHHHHHhCCceeecC
Q 037999 343 AIGGFLTHSG------WNSTLESLVAGVPMICWP 370 (447)
Q Consensus 343 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 370 (447)
..+++++|.| .+.++||...++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3445888877 458999999999999984
No 306
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=22.36 E-value=2.8e+02 Score=26.16 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCCCcEEEE-CCCcchHHHHHHHcCCCeEEEcCC
Q 037999 76 LAFLQLLMSPGLLPTCIIS-DSIMSFTIDVAEELNIPIITFRPY 118 (447)
Q Consensus 76 ~~l~~ll~~~~~~~D~iI~-D~~~~~~~~~A~~lgIP~v~~~~~ 118 (447)
..+.++++ +.|++|. |+ +...+|..+|+|.+.++..
T Consensus 246 ~el~ali~----~a~l~I~~DS---gp~HlAaa~g~P~i~lfg~ 282 (319)
T TIGR02193 246 AEVAALLA----GADAVVGVDT---GLTHLAAALDKPTVTLYGA 282 (319)
T ss_pred HHHHHHHH----cCCEEEeCCC---hHHHHHHHcCCCEEEEECC
Confidence 33455555 4689884 44 4678999999999988653
No 307
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=22.22 E-value=1.9e+02 Score=27.31 Aligned_cols=52 Identities=13% Similarity=0.200 Sum_probs=35.1
Q ss_pred ccccceeeeccChhhHHHHHHh----CCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 341 HQAIGGFLTHSGWNSTLESLVA----GVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 341 ~~~~~~~ithgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
.+++ +|+-||=||+++++.. ++|++++-.. .+|.. -.++.+++.+++.+++.
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL--~~~~~~~~~~~l~~~~~ 118 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFI--TDIPLDDMQETLPPMLA 118 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------Ccccc--ccCCHHHHHHHHHHHHc
Confidence 4555 9999999999999763 6788877320 12222 24566777777777765
No 308
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=22.08 E-value=1.3e+02 Score=26.66 Aligned_cols=41 Identities=22% Similarity=0.207 Sum_probs=25.8
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcc-------hHHHHHHHcCCCeEEE
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMS-------FTIDVAEELNIPIITF 115 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~-------~~~~~A~~lgIP~v~~ 115 (447)
.+.+.+++++...++|+|++|-+-. .|..++-.+++|.+.+
T Consensus 76 ~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 76 LPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp HHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 3666777777656899999998632 2445566778999875
No 309
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=22.05 E-value=1.5e+02 Score=25.36 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCCCcEEEECCCcch--HHHHHHHcCCCeEEEc
Q 037999 75 KLAFLQLLMSPGLLPTCIISDSIMSF--TIDVAEELNIPIITFR 116 (447)
Q Consensus 75 ~~~l~~ll~~~~~~~D~iI~D~~~~~--~~~~A~~lgIP~v~~~ 116 (447)
.+.++.++.. +||+||......- ....-+..|||++.+.
T Consensus 59 ~~n~E~ll~l---~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 59 SLNVELIVAL---KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCHHHHhcc---CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 3556666654 7999997554332 3344578999998764
No 310
>PRK03094 hypothetical protein; Provisional
Probab=22.04 E-value=90 Score=23.02 Aligned_cols=20 Identities=15% Similarity=0.398 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 037999 2 LTLAELFSHAGFRVTFVNTE 21 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~ 21 (447)
..+.+.|.++||+|.=+.++
T Consensus 11 s~i~~~L~~~GYeVv~l~~~ 30 (80)
T PRK03094 11 TDVQQALKQKGYEVVQLRSE 30 (80)
T ss_pred HHHHHHHHHCCCEEEecCcc
Confidence 46889999999999877653
No 311
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.83 E-value=1.8e+02 Score=27.45 Aligned_cols=53 Identities=6% Similarity=0.054 Sum_probs=35.3
Q ss_pred cccccceeeeccChhhHHHHHHh----CCceeecCccchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHHh
Q 037999 340 AHQAIGGFLTHSGWNSTLESLVA----GVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (447)
Q Consensus 340 ~~~~~~~~ithgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l~ 410 (447)
..+++ +|+-||=||++.+... ++|++++-.. .+|-. ..++.+++.+++.+++.
T Consensus 63 ~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL--t~~~~~~~~~~l~~i~~ 119 (287)
T PRK14077 63 KISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL--TDITVDEAEKFFQAFFQ 119 (287)
T ss_pred cCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC--CcCCHHHHHHHHHHHHc
Confidence 34555 9999999999988653 7788877321 12221 24567777777777765
No 312
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=21.72 E-value=2.5e+02 Score=24.38 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=14.3
Q ss_pred HHHHHhCCCCCCcEEE-ECCCcc-hHHHHHHHcCCCeEEE
Q 037999 78 FLQLLMSPGLLPTCII-SDSIMS-FTIDVAEELNIPIITF 115 (447)
Q Consensus 78 l~~ll~~~~~~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~ 115 (447)
++.+|+.. +||++| ++.=.+ --...|++.|||.+.+
T Consensus 87 ~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 87 VRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp HHHHHHHH----SEEEEES----HHHHHH-----S-EEEE
T ss_pred HHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEE
Confidence 34445444 678666 444333 3445677889999986
No 313
>PRK04940 hypothetical protein; Provisional
Probab=21.54 E-value=2.9e+02 Score=23.94 Aligned_cols=32 Identities=13% Similarity=0.056 Sum_probs=24.7
Q ss_pred CCcEEEECCCc-chHHHHHHHcCCCeEEEcCCc
Q 037999 88 LPTCIISDSIM-SFTIDVAEELNIPIITFRPYS 119 (447)
Q Consensus 88 ~~D~iI~D~~~-~~~~~~A~~lgIP~v~~~~~~ 119 (447)
++.++|-..+- +||.-+|+++|+|.|.+.|+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 35677755554 499999999999999986653
No 314
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=21.48 E-value=86 Score=26.63 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=21.7
Q ss_pred cceeeeccCh------hhHHHHHHhCCceeecC
Q 037999 344 IGGFLTHSGW------NSTLESLVAGVPMICWP 370 (447)
Q Consensus 344 ~~~~ithgG~------~s~~eal~~GvP~l~~P 370 (447)
.+.+++|+|- +.+.||...++|||++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3448888874 47889999999999994
No 315
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=21.34 E-value=4.3e+02 Score=28.42 Aligned_cols=33 Identities=6% Similarity=0.136 Sum_probs=25.4
Q ss_pred CCcEEEECCCcch---------HHHHHHHcCCCeEEEcCCch
Q 037999 88 LPTCIISDSIMSF---------TIDVAEELNIPIITFRPYSA 120 (447)
Q Consensus 88 ~~D~iI~D~~~~~---------~~~~A~~lgIP~v~~~~~~~ 120 (447)
++|++|+|...+. ..++|+.++.|++.+.....
T Consensus 76 ~~D~VLIEGa~~~~~~~~~~~~na~iA~~L~~pVILV~~~~~ 117 (684)
T PRK05632 76 DCDVVLVEGLDPTRKHPFEFSLNAEIAKNLGAEVVLVSSGGN 117 (684)
T ss_pred CCCEEEEeCcCCCCcCcccCchHHHHHHHhCCCEEEEECCCC
Confidence 7899998876432 35689999999998876653
No 316
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
Probab=21.20 E-value=6.7e+02 Score=26.36 Aligned_cols=52 Identities=6% Similarity=0.067 Sum_probs=28.1
Q ss_pred eccChhhHHHHHHhCC--ce--eecCc-cchhhHHHHHHHhhcceeeEeCCCCCHHHHHHHHHHHH
Q 037999 349 THSGWNSTLESLVAGV--PM--ICWPQ-IGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLM 409 (447)
Q Consensus 349 thgG~~s~~eal~~Gv--P~--l~~P~-~~DQ~~na~~~~~~~g~g~~~~~~~~~~~l~~ai~~~l 409 (447)
.+||+|+........- |+ +++|- |.++.... .+.++ -.++++.|.+.|++++
T Consensus 524 ~~GG~gs~v~~~l~~~~~~~~~~gi~d~f~~~g~~~-~l~~~--------~Gl~~~~I~~~i~~~l 580 (581)
T PRK12315 524 LDGGFGEKIARYYGNSDMKVLNYGAKKEFNDRVPVE-ELYKR--------NHLTPEQIVEDILSVL 580 (581)
T ss_pred cCCCHHHHHHHHHHcCCCeEEEecCCCCCCCCCCHH-HHHHH--------HCcCHHHHHHHHHHHh
Confidence 4699988766655433 33 33443 33332222 23232 2367888888777654
No 317
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=20.61 E-value=84 Score=28.32 Aligned_cols=20 Identities=20% Similarity=0.494 Sum_probs=17.6
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.||+.|.+.||+|+++-...
T Consensus 14 ~va~~L~~~g~~Vv~Id~d~ 33 (225)
T COG0569 14 SVARELSEEGHNVVLIDRDE 33 (225)
T ss_pred HHHHHHHhCCCceEEEEcCH
Confidence 68999999999999997643
No 318
>PRK04148 hypothetical protein; Provisional
Probab=20.26 E-value=1e+02 Score=25.26 Aligned_cols=20 Identities=20% Similarity=0.509 Sum_probs=16.9
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.+|+.|++.||+|+.+--..
T Consensus 30 ~vA~~L~~~G~~ViaIDi~~ 49 (134)
T PRK04148 30 KVAKKLKESGFDVIVIDINE 49 (134)
T ss_pred HHHHHHHHCCCEEEEEECCH
Confidence 58999999999999986543
No 319
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=20.24 E-value=1e+02 Score=26.16 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 037999 3 TLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 3 ~La~~La~rGh~VT~~t~~~ 22 (447)
.|+++|.++||+|+.++-..
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~ 32 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSP 32 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSG
T ss_pred HHHHHHHHCCCEEEEEecCc
Confidence 58899999999999998653
No 320
>PLN02293 adenine phosphoribosyltransferase
Probab=20.17 E-value=2.9e+02 Score=24.04 Aligned_cols=28 Identities=7% Similarity=0.043 Sum_probs=21.4
Q ss_pred CCcEEE-ECCCcc-hHHHHHHHcCCCeEEE
Q 037999 88 LPTCII-SDSIMS-FTIDVAEELNIPIITF 115 (447)
Q Consensus 88 ~~D~iI-~D~~~~-~~~~~A~~lgIP~v~~ 115 (447)
++|+|+ .+.-.. ++..+|..+|+|++..
T Consensus 62 ~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~ 91 (187)
T PLN02293 62 GISVVAGIEARGFIFGPPIALAIGAKFVPL 91 (187)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHCCCEEEE
Confidence 689888 454433 7888999999998764
No 321
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=20.15 E-value=97 Score=27.96 Aligned_cols=18 Identities=39% Similarity=0.534 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 037999 2 LTLAELFSHAGFRVTFVN 19 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t 19 (447)
.++|++|+++|++|+++.
T Consensus 29 ~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 29 KIITETFLSAGHEVTLVT 46 (227)
T ss_pred HHHHHHHHHCCCEEEEEc
Confidence 368999999999999875
No 322
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=20.12 E-value=1.4e+02 Score=25.31 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=30.0
Q ss_pred cc-cChHHHhcccccceeeeccChhhHHH---HHHhCCceeecCc
Q 037999 331 SW-APQEEVLAHQAIGGFLTHSGWNSTLE---SLVAGVPMICWPQ 371 (447)
Q Consensus 331 ~~-~pq~~lL~~~~~~~~ithgG~~s~~e---al~~GvP~l~~P~ 371 (447)
++ .+-..++...+...++--||.||+.| ++.+++|+++++.
T Consensus 79 ~~~~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 79 GMNFARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred CCcchHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44 44566666655566777889888765 5789999999876
No 323
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=20.01 E-value=1e+02 Score=22.73 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 037999 2 LTLAELFSHAGFRVTFVNTEQ 22 (447)
Q Consensus 2 l~La~~La~rGh~VT~~t~~~ 22 (447)
-.+.+.|.++||+|+=+....
T Consensus 11 s~v~~~L~~~GyeVv~l~~~~ 31 (80)
T PF03698_consen 11 SNVKEALREKGYEVVDLENEQ 31 (80)
T ss_pred hHHHHHHHHCCCEEEecCCcc
Confidence 467899999999999887654
Done!